Guide to the Human Genome
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Name: TSP50 Sequence: fasta or formatted (385aa) NCBI GI: 7019563
Description:

testes-specific protease 50

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         30           2
 C cysteine            3.9         15           1
 D aspartate           3.9         15           1
 E glutamate           3.9         15           1
 F phenylalanine       1.8          7           1
 G glycine             6.2         24           1
 H histidine           1.8          7           1
 I isoleucine          4.4         17           2
 K lysine              3.4         13           1
 L leucine            10.9         42           8
 M methionine          2.3          9           2
 N asparagine          2.1          8           2
 P proline             7.0         27           2
 Q glutamine           6.0         23           1
 R arginine            6.0         23           2
 S serine              7.5         29           2
 T threonine           7.0         27           2
 V valine              6.8         26           1
 W tryptophan          4.2         16           1
 Y tyrosine            3.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testes-specific protease 50 
PRSS8                 0.167   prostasin preproprotein 
PRSS27                0.163   marapsin 
PRSS33                0.163   protease, serine, 33 
PRSS22                0.161   protease, serine, 22 
PRSS21                0.156   testisin isoform 1 
PRSS21                0.153   testisin isoform 2 
HPN                   0.149   hepsin 
KLKB1                 0.149   plasma kallikrein B1 precursor 
HPN                   0.149   hepsin 
ESSPL                 0.148   epidermis-specific serine protease-like protein [Ho...
TESSP1                0.147   testis-specific serine protease 1 
TPSAB1                0.145   tryptase alpha/beta 1 precursor 
TPSB2                 0.142   tryptase beta 2 precursor 
PRSS21                0.140   testisin isoform 3 
LOC100293486          0.136   PREDICTED: similar to hCG2041452 
LOC100291379          0.136   PREDICTED: hypothetical protein XP_002346556 
LOC100288960          0.136   PREDICTED: hypothetical protein XP_002342392 
TPSG1                 0.134   transmembrane tryptase preproprotein 
TMPRSS11B             0.133   transmembrane protease, serine 11B 
TMPRSS13              0.131   transmembrane protease, serine 13 
MPN2                  0.131   marapsin 2 
F11                   0.130   coagulation factor XI precursor 
OVCH1                 0.128   ovochymase 1 
TMPRSS3               0.128   transmembrane protease, serine 3 isoform 1 
TMPRSS2               0.124   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.124   transmembrane protease, serine 2 isoform 2 
LOC100291622          0.124   PREDICTED: similar to 1700112C13Rik protein 
LOC100287362          0.124   PREDICTED: hypothetical protein XP_002342372 
TMPRSS6               0.124   transmembrane protease, serine 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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