Guide to the Human Genome
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Name: NFKBIZ Sequence: fasta or formatted (718aa) NCBI GI: 13899229
Description:

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta isoform a

Referenced in:

NF-kappaB Pathway
T cells

Other entries for this name:
alt prot [618aa] nuclear factor of kappa light polypeptide gene enhancer in B-cell...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         60           3
 C cysteine            2.1         15           1
 D aspartate           4.6         33           2
 E glutamate           5.3         38           2
 F phenylalanine       2.9         21           1
 G glycine             6.7         48           2
 H histidine           3.5         25           1
 I isoleucine          3.1         22           2
 K lysine              4.2         30           1
 L leucine             9.3         67           3
 M methionine          2.2         16           2
 N asparagine          5.2         37           1
 P proline             7.1         51           2
 Q glutamine           8.8         63           3
 R arginine            4.2         30           2
 S serine             10.2         73           3
 T threonine           3.3         24           2
 V valine              6.8         49           3
 W tryptophan          0.4          3           1
 Y tyrosine            1.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of kappa light polypeptide gene enhan... 
NFKBIZ                0.859   nuclear factor of kappa light polypeptide gene enhan...
NFKBID                0.128   nuclear factor of kappa light polypeptide gene enhan...
BCL3                  0.062   B-cell CLL/lymphoma 3 
NFKB2                 0.054   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.054   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.054   nuclear factor of kappa light polypeptide gene enha...
NFKB1                 0.049   nuclear factor kappa-B, subunit 1 
NFKBIE                0.047   nuclear factor of kappa light polypeptide gene enhan...
NFKBIA                0.045   nuclear factor of kappa light polypeptide gene enhan...
ANK1                  0.040   ankyrin 1 isoform 9 
ANK1                  0.040   ankyrin 1 isoform 1 
ANK1                  0.040   ankyrin 1 isoform 3 
ANK1                  0.040   ankyrin 1 isoform 2 
ANK1                  0.040   ankyrin 1 isoform 4 
ANK2                  0.038   ankyrin 2 isoform 3 
ANK2                  0.038   ankyrin 2 isoform 2 
ANK2                  0.038   ankyrin 2 isoform 1 
ANK3                  0.037   ankyrin 3 isoform 1 
ANKRD6                0.036   ankyrin repeat domain 6 
ANKK1                 0.035   ankyrin repeat and kinase domain containing 1 
PSMD10                0.035   proteasome 26S non-ATPase subunit 10 isoform 1 
TNKS2                 0.033   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD28               0.032   ankyrin repeat domain 28 
RIPK4                 0.032   ankyrin repeat domain 3 
ANKRD52               0.031   ankyrin repeat domain 52 
TNKS                  0.031   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKDD1A               0.030   ankyrin repeat and death domain containing 1A 
DAPK1                 0.030   death-associated protein kinase 1 
PPP1R12C              0.030   protein phosphatase 1, regulatory subunit 12C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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