Guide to the Human Genome
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Name: PPP1R12C Sequence: fasta or formatted (782aa) NCBI GI: 14149716
Description:

protein phosphatase 1, regulatory subunit 12C

Referenced in:

Myosin
Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.2        103           6
 C cysteine            1.0          8           1
 D aspartate           5.1         40           1
 E glutamate          11.6         91           3
 F phenylalanine       1.0          8           1
 G glycine             7.8         61           3
 H histidine           1.7         13           1
 I isoleucine          1.5         12           1
 K lysine              3.5         27           1
 L leucine            10.0         78           3
 M methionine          1.0          8           1
 N asparagine          2.0         16           1
 P proline             9.1         71           3
 Q glutamine           4.1         32           1
 R arginine           10.7         84           3
 S serine              7.8         61           3
 T threonine           3.6         28           2
 V valine              3.5         27           2
 W tryptophan          1.0          8           1
 Y tyrosine            0.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, regulatory subunit 12C 
PPP1R12A              0.219   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.219   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R12B              0.201   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.201   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R12A              0.176   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R16A              0.116   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R16B              0.107   protein phosphatase 1 regulatory inhibitor subunit 1...
PPP1R12B              0.057   protein phosphatase 1, regulatory (inhibitor) subuni...
MYO16                 0.057   myosin heavy chain Myr 8 
ANK2                  0.054   ankyrin 2 isoform 2 
ANK2                  0.054   ankyrin 2 isoform 1 
ANK2                  0.051   ankyrin 2 isoform 3 
ANKK1                 0.050   ankyrin repeat and kinase domain containing 1 
TNKS                  0.050   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
PSMD10                0.049   proteasome 26S non-ATPase subunit 10 isoform 1 
DYSFIP1               0.049   dysferlin-interacting protein 1 
ANKRD50               0.047   ankyrin repeat domain 50 
CASKIN2               0.047   cask-interacting protein 2 isoform a 
CASKIN1               0.046   CASK interacting protein 1 
ANK3                  0.046   ankyrin 3 isoform 1 
TNKS2                 0.046   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANK1                  0.045   ankyrin 1 isoform 9 
ANK1                  0.045   ankyrin 1 isoform 1 
ANK1                  0.045   ankyrin 1 isoform 3 
ANK1                  0.045   ankyrin 1 isoform 2 
ANK1                  0.045   ankyrin 1 isoform 4 
DAPK1                 0.041   death-associated protein kinase 1 
RAI14                 0.041   retinoic acid induced 14 isoform d 
RAI14                 0.041   retinoic acid induced 14 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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