Guide to the Human Genome
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Name: BAMBI Sequence: fasta or formatted (260aa) NCBI GI: 6912534
Description:

BMP and activin membrane-bound inhibitor precursor

Referenced in:

TGF-beta Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         17           2
 C cysteine            5.8         15           2
 D aspartate           5.0         13           1
 E glutamate           4.6         12           1
 F phenylalanine       1.9          5           1
 G glycine             6.5         17           2
 H histidine           5.4         14           2
 I isoleucine          4.2         11           1
 K lysine              4.6         12           2
 L leucine            13.1         34           2
 M methionine          3.8         10           1
 N asparagine          3.5          9           1
 P proline             2.7          7           2
 Q glutamine           5.0         13           2
 R arginine            5.8         15           1
 S serine              8.8         23           2
 T threonine           4.2         11           2
 V valine              4.6         12           1
 W tryptophan          1.2          3           1
 Y tyrosine            2.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BMP and activin membrane-bound inhibitor precursor [H... 
ACVR1C                0.021   activin A receptor, type IC isoform 1 
ACVR1C                0.019   activin A receptor, type IC isoform 4 
ACVR1C                0.019   activin A receptor, type IC isoform 3 
BMPR1A                0.014   bone morphogenetic protein receptor, type IA precurs...
SCNN1A                0.012   sodium channel, nonvoltage-gated 1 alpha isoform 2 ...
SCNN1A                0.012   sodium channel, nonvoltage-gated 1 alpha isoform 3 ...
SCNN1A                0.012   sodium channel, nonvoltage-gated 1 alpha isoform 1 [H...
LRP4                  0.010   low density lipoprotein receptor-related protein 4 ...
MEGF6                 0.010   EGF-like-domain, multiple 3 
DPM2                  0.010   dolichyl-phosphate mannosyltransferase 2 
GOLGB1                0.008   golgi autoantigen, golgin subfamily b, macrogolgin ...
LY6H                  0.008   lymphocyte antigen 6 complex, locus H isoform b [Ho...
LY6H                  0.008   lymphocyte antigen 6 complex, locus H isoform a [Ho...
LY6H                  0.008   lymphocyte antigen 6 complex, locus H isoform b [Ho...
LYPD2                 0.008   LY6/PLAUR domain containing 2 
PLXNA4                0.006   plexin A4 isoform 1 
STX10                 0.006   syntaxin 10 
ACVR1C                0.006   activin A receptor, type IC isoform 2 
PTPRF                 0.006   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.006   protein tyrosine phosphatase, receptor type, F isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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