Guide to the Human Genome
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Name: KPRP Sequence: fasta or formatted (579aa) NCBI GI: 68563515
Description:

keratinocyte proline-rich protein

Referenced in:

Late Cornified Envelope Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         23           2
 C cysteine            9.3         54           2
 D aspartate           1.6          9           1
 E glutamate           5.4         31           1
 F phenylalanine       2.8         16           1
 G glycine             5.0         29           1
 H histidine           1.0          6           1
 I isoleucine          1.9         11           1
 K lysine              1.7         10           1
 L leucine             4.1         24           1
 M methionine          0.5          3           1
 N asparagine          1.4          8           2
 P proline            18.0        104           3
 Q glutamine          11.1         64           3
 R arginine            8.8         51           3
 S serine             11.1         64           3
 T threonine           3.5         20           2
 V valine              5.2         30           3
 W tryptophan          0.5          3           1
 Y tyrosine            3.3         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratinocyte proline-rich protein 
DGKK                  0.046   diacylglycerol kinase kappa 
TPRX1                 0.045   tetra-peptide repeat homeobox 
LOC100133001          0.040   PREDICTED: similar to hCG30082, partial 
MLL2                  0.040   myeloid/lymphoid or mixed-lineage leukemia 2 
CDKN1C                0.037   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.037   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.037   cyclin-dependent kinase inhibitor 1C isoform a 
C1orf68               0.035   skin-specific protein 32 
PRR12                 0.034   proline rich 12 
LOC100131696          0.033   PREDICTED: keratin associated protein 
LOC100288060          0.033   PREDICTED: hypothetical protein XP_002343557 
PHLDA1                0.031   pleckstrin homology-like domain, family A, member 1 ...
LOC100131696          0.030   PREDICTED: keratin associated protein 
INF2                  0.030   inverted formin 2 isoform 2 
INF2                  0.030   inverted formin 2 isoform 1 
SRRM1                 0.030   serine/arginine repetitive matrix 1 
PTPN23                0.030   protein tyrosine phosphatase, non-receptor type 23 [...
TROAP                 0.029   tastin isoform 1 
BCORL1                0.028   BCL6 co-repressor-like 1 
LOC729815             0.027   PREDICTED: hypothetical protein 
SELV                  0.027   selenoprotein V 
FLJ22184              0.026   PREDICTED: hypothetical protein FLJ22184 
MLL4                  0.026   myeloid/lymphoid or mixed-lineage leukemia 4 
LOC100134147          0.026   PREDICTED: hypothetical protein 
RAPH1                 0.026   Ras association and pleckstrin homology domains 1 is...
LOC729815             0.026   PREDICTED: hypothetical protein 
C2orf71               0.026   hypothetical protein LOC388939 
GNAS                  0.025   GNAS complex locus alex 
FLJ22184              0.025   PREDICTED: hypothetical protein LOC80164 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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