Name: SNCA | Sequence: fasta or formatted (112aa) | NCBI GI: 6806898 | |
Description: alpha-synuclein isoform NACP112
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Referenced in:
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Other entries for this name:
alt prot [140aa] alpha-synuclein isoform NACP140 alt prot [140aa] alpha-synuclein isoform NACP140 alt prot [140aa] alpha-synuclein isoform NACP140 | |||
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 15.2 17 3 C cysteine 0.0 0 0 D aspartate 2.7 3 1 E glutamate 9.8 11 1 F phenylalanine 1.8 2 1 G glycine 14.3 16 2 H histidine 0.9 1 1 I isoleucine 0.9 1 1 K lysine 13.4 15 2 L leucine 2.7 3 1 M methionine 1.8 2 1 N asparagine 0.9 1 1 P proline 0.9 1 1 Q glutamine 4.5 5 1 R arginine 0.0 0 0 S serine 2.7 3 1 T threonine 8.9 10 1 V valine 16.1 18 2 W tryptophan 0.0 0 0 Y tyrosine 2.7 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 alpha-synuclein isoform NACP112 SNCA 0.921 alpha-synuclein isoform NACP140 SNCA 0.921 alpha-synuclein isoform NACP140 SNCA 0.921 alpha-synuclein isoform NACP140 SNCB 0.555 beta-synuclein SNCB 0.555 beta-synuclein SNCG 0.508 synuclein, gamma (breast cancer-specific protein 1)... VPS13D 0.031 vacuolar protein sorting 13D isoform 2 VPS13D 0.031 vacuolar protein sorting 13D isoform 1 M6PRBP1 0.026 mannose 6 phosphate receptor binding protein 1 [Homo... KIAA1881 0.021 plasma membrane associated protein, S3-12 VPS13C 0.021 vacuolar protein sorting 13C protein isoform 1A [Hom... VPS13C 0.021 vacuolar protein sorting 13C protein isoform 1B [Hom... VPS13C 0.021 vacuolar protein sorting 13C protein isoform 2B [Hom... VPS13C 0.021 vacuolar protein sorting 13C protein isoform 2A [Hom... C12orf23 0.016 hypothetical protein LOC90488 TTN 0.016 titin isoform novex-3 TTN 0.016 titin isoform N2-A TTN 0.016 titin isoform novex-2 TTN 0.016 titin isoform novex-1 TTN 0.016 titin isoform N2-B TCF20 0.010 transcription factor 20 isoform 2 TCF20 0.010 transcription factor 20 isoform 1 MPP6 0.010 membrane protein, palmitoylated 6 CAND2 0.005 TBP-interacting protein isoform 1 CAND2 0.005 TBP-interacting protein isoform 2 TP53I3 0.005 tumor protein p53 inducible protein 3 TP53I3 0.005 tumor protein p53 inducible protein 3 PIM3 0.005 serine/threonine protein kinase pim-3 STAB2 0.005 stabilin 2 precursorHuman BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.