Guide to the Human Genome
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Name: CYB561D1 Sequence: fasta or formatted (172aa) NCBI GI: 197304729
Description:

cytochrome b-561 domain containing 1 isoform 3

Referenced in:

Iron, Copper, and Arsenic Metabolism

Other entries for this name:
alt prot [251aa] cytochrome b-561 domain containing 1 isoform 1
alt prot [133aa] cytochrome b-561 domain containing 1 isoform 4
alt prot [128aa] cytochrome b-561 domain containing 1 isoform 5
alt prot [229aa] cytochrome b-561 domain containing 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         20           2
 C cysteine            5.2          9           1
 D aspartate           0.0          0           0
 E glutamate           2.9          5           1
 F phenylalanine       4.1          7           3
 G glycine             4.7          8           1
 H histidine           3.5          6           1
 I isoleucine          4.7          8           2
 K lysine              2.9          5           2
 L leucine            18.0         31           2
 M methionine          4.1          7           1
 N asparagine          0.0          0           0
 P proline             4.1          7           1
 Q glutamine           3.5          6           1
 R arginine            6.4         11           1
 S serine              7.0         12           2
 T threonine           4.1          7           1
 V valine              7.0         12           2
 W tryptophan          2.9          5           1
 Y tyrosine            3.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome b-561 domain containing 1 isoform 3 [Hom... 
CYB561D1              0.979   cytochrome b-561 domain containing 1 isoform 1 [Hom...
CYB561D1              0.972   cytochrome b-561 domain containing 1 isoform 2 [Homo...
CYB561D2              0.391   cytochrome b-561 domain containing 2 
CYB561                0.061   cytochrome b-561 
CYB561                0.061   cytochrome b-561 
CYB561                0.061   cytochrome b-561 
CYBRD1                0.058   cytochrome b reductase 1 isoform 1 
CYBASC3               0.037   cytochrome b, ascorbate dependent 3 isoform 2 [Homo...
CYBASC3               0.037   cytochrome b, ascorbate dependent 3 isoform 1 [Homo...
CYBASC3               0.037   cytochrome b, ascorbate dependent 3 isoform 2 [Homo...
RHCE                  0.018   Rhesus blood group, CcEe antigens isoform 2 
RHCE                  0.018   Rhesus blood group, CcEe antigens isoform 4 
RHCE                  0.018   Rhesus blood group, CcEe antigens isoform 3 
RHCE                  0.018   Rhesus blood group, CcEe antigens isoform 1 
RHD                   0.015   Rh blood group D antigen isoform 2 
RHD                   0.015   Rh blood group D antigen isoform 1 
OR6F1                 0.009   olfactory receptor, family 6, subfamily F, member 1 ...
LMLN                  0.009   leishmanolysin-like isoform 1 
LMLN                  0.009   leishmanolysin-like isoform 2 
LOC100293124          0.009   PREDICTED: similar to patatin-like phospholipase do...
GDPD5                 0.006   glycerophosphodiester phosphodiesterase domain cont...
IL17RB                0.006   interleukin 17B receptor precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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