Guide to the Human Genome
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Name: SLC22A17 Sequence: fasta or formatted (520aa) NCBI GI: 63999576
Description:

solute carrier family 22, member 17 isoform b

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [538aa] solute carrier family 22, member 17 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         56           3
 C cysteine            2.9         15           1
 D aspartate           3.3         17           1
 E glutamate           3.3         17           2
 F phenylalanine       5.0         26           1
 G glycine            10.2         53           4
 H histidine           2.1         11           1
 I isoleucine          4.4         23           1
 K lysine              1.2          6           1
 L leucine            17.5         91           3
 M methionine          1.7          9           1
 N asparagine          2.5         13           1
 P proline             6.2         32           3
 Q glutamine           3.1         16           1
 R arginine            5.6         29           2
 S serine              6.3         33           2
 T threonine           4.6         24           2
 V valine              5.8         30           2
 W tryptophan          1.7          9           1
 Y tyrosine            1.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22, member 17 isoform b 
SLC22A17              0.985   solute carrier family 22, member 17 isoform a 
LOC146429             0.252   PREDICTED: hypothetical protein LOC146429 isoform 1...
LOC146429             0.250   PREDICTED: hypothetical protein LOC146429 isoform 6...
SLC22A23              0.231   solute carrier family 22, member 23 isoform a [Homo...
SLC22A23              0.184   solute carrier family 22, member 23 isoform b 
LOC146429             0.165   PREDICTED: hypothetical protein LOC146429 
SLC22A3               0.115   solute carrier family 22 member 3 
SLC22A13              0.108   solute carrier family 22 (organic anion transporter...
SLC22A1               0.098   solute carrier family 22 member 1 isoform a 
SLC22A8               0.098   solute carrier family 22 member 8 
SLC22A7               0.098   solute carrier family 22 member 7 isoform b 
SLC22A6               0.098   solute carrier family 22 member 6 isoform b 
SLC22A7               0.097   solute carrier family 22 member 7 isoform a 
SLC22A2               0.097   solute carrier family 22 member 2 
SLC22A6               0.096   solute carrier family 22 member 6 isoform a 
SLC22A9               0.093   solute carrier family 22 (organic anion/cation trans...
SLC22A12              0.092   urate anion exchanger 1 isoform a 
SLC22A25              0.091   putative UST1-like organic anion transporter 
SLC22A24              0.086   solute carrier family 22, member 24 
SLC22A20              0.085   solute carrier family 22, member 20 
SLC22A10              0.084   solute carrier family 22, member 10 
SLC22A6               0.079   solute carrier family 22 member 6 isoform d 
SLC22A6               0.079   solute carrier family 22 member 6 isoform c 
SLC22A1               0.076   solute carrier family 22 member 1 isoform b 
SLC22A11              0.076   solute carrier family 22 member 11 
SLC22A16              0.076   solute carrier family 22, member 16 
SLC22A5               0.075   solute carrier family 22 member 5 
SLC22A15              0.073   solute carrier family 22, member 15 
SLC22A4               0.065   solute carrier family 22 member 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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