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Search of human proteins with 63252863
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
(1834 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens] 3693 0.0
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 55 6e-07
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 55 8e-07
gi|115430108 rho-related BTB domain containing 3 [Homo sapiens] 50 3e-05
gi|150418009 transforming, acidic coiled-coil containing protein... 49 3e-05
gi|45827755 transforming, acidic coiled-coil containing protein ... 49 3e-05
gi|45827753 transforming, acidic coiled-coil containing protein ... 49 3e-05
gi|11119414 transforming, acidic coiled-coil containing protein ... 49 3e-05
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 49 4e-05
gi|40807477 retinoic acid induced 1 [Homo sapiens] 49 4e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens] 48 1e-04
gi|91982772 mucin 17 [Homo sapiens] 48 1e-04
gi|164419758 bromodomain containing 2 [Homo sapiens] 47 1e-04
gi|4826806 bromodomain containing 2 [Homo sapiens] 47 1e-04
gi|46370071 GRB2-associated binding protein 1 isoform a [Homo sa... 47 2e-04
gi|4557445 regulator of chromosome condensation and BTB domain c... 46 3e-04
gi|211904190 hypothetical protein LOC149478 [Homo sapiens] 45 6e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 45 8e-04
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 45 8e-04
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 45 8e-04
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 45 8e-04
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 44 0.001
gi|19924097 synapsin I isoform Ib [Homo sapiens] 44 0.001
gi|92091572 dedicator of cytokinesis 4 [Homo sapiens] 44 0.001
gi|4507161 SRY-box 11 [Homo sapiens] 44 0.001
gi|239743602 PREDICTED: hypothetical protein XP_002342903 [Homo ... 44 0.002
gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo ... 44 0.002
gi|239743598 PREDICTED: hypothetical protein XP_002342901 [Homo ... 44 0.002
gi|239743596 PREDICTED: hypothetical protein XP_002342900 [Homo ... 44 0.002
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 44 0.002
>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
Length = 1834
Score = 3693 bits (9577), Expect = 0.0
Identities = 1834/1834 (100%), Positives = 1834/1834 (100%)
Query: 1 MKLSVNEAQLGFYLGSLSHLSACPGIDPRSSEDQPESLKTGQMMDESDEDFKELCASFFQ 60
MKLSVNEAQLGFYLGSLSHLSACPGIDPRSSEDQPESLKTGQMMDESDEDFKELCASFFQ
Sbjct: 1 MKLSVNEAQLGFYLGSLSHLSACPGIDPRSSEDQPESLKTGQMMDESDEDFKELCASFFQ 60
Query: 61 RVKKHGIKEVSGERKTQKAASNGTQIRSKLKRTKQTATKTKTLQGPAEKKPPSGSQAPRT 120
RVKKHGIKEVSGERKTQKAASNGTQIRSKLKRTKQTATKTKTLQGPAEKKPPSGSQAPRT
Sbjct: 61 RVKKHGIKEVSGERKTQKAASNGTQIRSKLKRTKQTATKTKTLQGPAEKKPPSGSQAPRT 120
Query: 121 KKQRVTKWQASEPAHSVNGEGGVLASAPDPPVLRETAQNTQTGNQQEPSPNLSREKTREN 180
KKQRVTKWQASEPAHSVNGEGGVLASAPDPPVLRETAQNTQTGNQQEPSPNLSREKTREN
Sbjct: 121 KKQRVTKWQASEPAHSVNGEGGVLASAPDPPVLRETAQNTQTGNQQEPSPNLSREKTREN 180
Query: 181 VPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPERLRHASEECSLEAAREEN 240
VPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPERLRHASEECSLEAAREEN
Sbjct: 181 VPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPERLRHASEECSLEAAREEN 240
Query: 241 VPKDPQEEMMAGNVYGLGPPAPESDAAVALTLQQEFARVGASAHDDSLEEKGLFFCQICQ 300
VPKDPQEEMMAGNVYGLGPPAPESDAAVALTLQQEFARVGASAHDDSLEEKGLFFCQICQ
Sbjct: 241 VPKDPQEEMMAGNVYGLGPPAPESDAAVALTLQQEFARVGASAHDDSLEEKGLFFCQICQ 300
Query: 301 KNLSAMNVTRREQHVNRCLDEAEKTLRPSVPQIPECPICGKPFLTLKSRTSHLKQCAVKM 360
KNLSAMNVTRREQHVNRCLDEAEKTLRPSVPQIPECPICGKPFLTLKSRTSHLKQCAVKM
Sbjct: 301 KNLSAMNVTRREQHVNRCLDEAEKTLRPSVPQIPECPICGKPFLTLKSRTSHLKQCAVKM 360
Query: 361 EVGPQLLLQAVRLQTAQPEGSSSPPMFSFSDHSRGLKRRGPTSKKEPRKRRKVDEAPSED 420
EVGPQLLLQAVRLQTAQPEGSSSPPMFSFSDHSRGLKRRGPTSKKEPRKRRKVDEAPSED
Sbjct: 361 EVGPQLLLQAVRLQTAQPEGSSSPPMFSFSDHSRGLKRRGPTSKKEPRKRRKVDEAPSED 420
Query: 421 LLVAMALSRSEMEPGAAVPALRLESAFSERIRPEAENKSRKKKPPVSPPLLLVQDSETTG 480
LLVAMALSRSEMEPGAAVPALRLESAFSERIRPEAENKSRKKKPPVSPPLLLVQDSETTG
Sbjct: 421 LLVAMALSRSEMEPGAAVPALRLESAFSERIRPEAENKSRKKKPPVSPPLLLVQDSETTG 480
Query: 481 RQIEDRVALLLSEEVELSSTPPLPASRILKEGWERAGQCPPPPERKQSFLWEGSALTGAW 540
RQIEDRVALLLSEEVELSSTPPLPASRILKEGWERAGQCPPPPERKQSFLWEGSALTGAW
Sbjct: 481 RQIEDRVALLLSEEVELSSTPPLPASRILKEGWERAGQCPPPPERKQSFLWEGSALTGAW 540
Query: 541 AMEDFYTARLVPPLVPQRPAQGLMQEPVPPLVPPEHSELSERRSPALHGTPTAGCGSRGP 600
AMEDFYTARLVPPLVPQRPAQGLMQEPVPPLVPPEHSELSERRSPALHGTPTAGCGSRGP
Sbjct: 541 AMEDFYTARLVPPLVPQRPAQGLMQEPVPPLVPPEHSELSERRSPALHGTPTAGCGSRGP 600
Query: 601 SPSASQREHQALQDLVDLAREGLSASPWPGSGGLAGSEGTAGLDVVPGGLPLTGFVVPSQ 660
SPSASQREHQALQDLVDLAREGLSASPWPGSGGLAGSEGTAGLDVVPGGLPLTGFVVPSQ
Sbjct: 601 SPSASQREHQALQDLVDLAREGLSASPWPGSGGLAGSEGTAGLDVVPGGLPLTGFVVPSQ 660
Query: 661 DKHPDRGGRTLLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQY 720
DKHPDRGGRTLLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQY
Sbjct: 661 DKHPDRGGRTLLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQY 720
Query: 721 VNNEGFSAVEDGVLTQRVLLGDVSTEAARTFLHYLYTADTGLPPGLSSELSSLAHRFGVS 780
VNNEGFSAVEDGVLTQRVLLGDVSTEAARTFLHYLYTADTGLPPGLSSELSSLAHRFGVS
Sbjct: 721 VNNEGFSAVEDGVLTQRVLLGDVSTEAARTFLHYLYTADTGLPPGLSSELSSLAHRFGVS 780
Query: 781 ELVHLCEQVPIATDSEGKPWEEKEAENCESRAENFQELLRSMWADEEEEAETLLKSKDHE 840
ELVHLCEQVPIATDSEGKPWEEKEAENCESRAENFQELLRSMWADEEEEAETLLKSKDHE
Sbjct: 781 ELVHLCEQVPIATDSEGKPWEEKEAENCESRAENFQELLRSMWADEEEEAETLLKSKDHE 840
Query: 841 EDQENVNEAEMEEIYEFAATQRKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQW 900
EDQENVNEAEMEEIYEFAATQRKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQW
Sbjct: 841 EDQENVNEAEMEEIYEFAATQRKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQW 900
Query: 901 DKVEEMEPLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAPEQEAPEEALGHSSCSS 960
DKVEEMEPLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAPEQEAPEEALGHSSCSS
Sbjct: 901 DKVEEMEPLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAPEQEAPEEALGHSSCSS 960
Query: 961 PSRDCQAERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITSEPEEQSGAVRERGLEVSH 1020
PSRDCQAERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITSEPEEQSGAVRERGLEVSH
Sbjct: 961 PSRDCQAERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITSEPEEQSGAVRERGLEVSH 1020
Query: 1021 RLAPWQASPPHPCRFLLGPPQGGSPRGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPS 1080
RLAPWQASPPHPCRFLLGPPQGGSPRGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPS
Sbjct: 1021 RLAPWQASPPHPCRFLLGPPQGGSPRGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPS 1080
Query: 1081 KQKRDRSILTLSKEPGHQKGKERRSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSRSQK 1140
KQKRDRSILTLSKEPGHQKGKERRSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSRSQK
Sbjct: 1081 KQKRDRSILTLSKEPGHQKGKERRSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSRSQK 1140
Query: 1141 SSSKLNEEDEVILLLDSDEELELEQTKMKSISSDPLEEKKALEISPRSCELFSIIDVDAD 1200
SSSKLNEEDEVILLLDSDEELELEQTKMKSISSDPLEEKKALEISPRSCELFSIIDVDAD
Sbjct: 1141 SSSKLNEEDEVILLLDSDEELELEQTKMKSISSDPLEEKKALEISPRSCELFSIIDVDAD 1200
Query: 1201 QEPSQSPPRSEAVLQQEDEGALPENRGSLGRRGAPWLFCDRESSPSEASTTDTSWLVPAT 1260
QEPSQSPPRSEAVLQQEDEGALPENRGSLGRRGAPWLFCDRESSPSEASTTDTSWLVPAT
Sbjct: 1201 QEPSQSPPRSEAVLQQEDEGALPENRGSLGRRGAPWLFCDRESSPSEASTTDTSWLVPAT 1260
Query: 1261 PLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNREGNEVAQKFSVIRPQTPPPQT 1320
PLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNREGNEVAQKFSVIRPQTPPPQT
Sbjct: 1261 PLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNREGNEVAQKFSVIRPQTPPPQT 1320
Query: 1321 PSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPISGDRAHFSRRFLKHSPPG 1380
PSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPISGDRAHFSRRFLKHSPPG
Sbjct: 1321 PSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPISGDRAHFSRRFLKHSPPG 1380
Query: 1381 PSFLNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSDPPIPIDDCCWHMEPLSPIPIDH 1440
PSFLNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSDPPIPIDDCCWHMEPLSPIPIDH
Sbjct: 1381 PSFLNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSDPPIPIDDCCWHMEPLSPIPIDH 1440
Query: 1441 WNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGN 1500
WNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGN
Sbjct: 1441 WNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGN 1500
Query: 1501 SRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPI 1560
SRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPI
Sbjct: 1501 SRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPI 1560
Query: 1561 TPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSSQPL 1620
TPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSSQPL
Sbjct: 1561 TPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSSQPL 1620
Query: 1621 LQAPHCQTLASQTYKPSRAGVHAQQEATTGPGAHRPKGPAKTKGPRHQRKHHESITPPSR 1680
LQAPHCQTLASQTYKPSRAGVHAQQEATTGPGAHRPKGPAKTKGPRHQRKHHESITPPSR
Sbjct: 1621 LQAPHCQTLASQTYKPSRAGVHAQQEATTGPGAHRPKGPAKTKGPRHQRKHHESITPPSR 1680
Query: 1681 SPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAGEEEGEGEV 1740
SPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAGEEEGEGEV
Sbjct: 1681 SPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAGEEEGEGEV 1740
Query: 1741 SASQAAVQAADTDEALRCYIRSKPALYQKVLLYQPFELRELQAELRQNGLRVSSRRLLDF 1800
SASQAAVQAADTDEALRCYIRSKPALYQKVLLYQPFELRELQAELRQNGLRVSSRRLLDF
Sbjct: 1741 SASQAAVQAADTDEALRCYIRSKPALYQKVLLYQPFELRELQAELRQNGLRVSSRRLLDF 1800
Query: 1801 LDTHCITFTTAATRREKLQGRRRQPRGKKKVERN 1834
LDTHCITFTTAATRREKLQGRRRQPRGKKKVERN
Sbjct: 1801 LDTHCITFTTAATRREKLQGRRRQPRGKKKVERN 1834
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 55.1 bits (131), Expect = 6e-07
Identities = 181/943 (19%), Positives = 318/943 (33%), Gaps = 141/943 (14%)
Query: 826 EEEEAETLLKSKDHEEDQENVNEAEMEEIYEFAATQRKLLQEERAAGAGEDADWLEGGSP 885
E ++ K H+ E N+ +++ + A L+E + D E G+
Sbjct: 528 EVPPGSAIIHIKKHQVSVEGTNQTDVKAVGGPAKLLVVSLEEAWPLHGDCETD-AEEGTS 586
Query: 886 VSGQLLAGVQVQKQWDKVEEMEPLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAP- 944
++ ++A V+ + P +A W L + GA+G
Sbjct: 587 LTASVVADVRKSQL-----------PAEGDAGAEW---AAAVLKQERAHEVGAQGGPPVA 632
Query: 945 --EQEAP------------EEALGHSSCSSPSRD-----CQAERKE---GSLPHSDDAGD 982
EQ+ P + LG S+ P R+ ER++ G+ D+ GD
Sbjct: 633 QVEQDLPISRENLTDLVVDTDTLGEST--QPQREGAQVPTGREREQHVGGTKDSEDNYGD 690
Query: 983 YEQL-------FSSTQGEISEPSQITSEPEEQSGAVRERGLEVSHRL--------APWQA 1027
E L F QG + + EP + + L SH PW+
Sbjct: 691 SEDLDLQATQCFLENQG-LEAVQSMEDEPTQAFMLTPPQELGPSHCSFQTTGTLDEPWEV 749
Query: 1028 SPPHPCRFLLGPPQGGSPRGSH-HTSGSSLSTPRSRGGTSQVGSPTLLSPAVPSKQKRDR 1086
P P +H G LS PR+ G SP P + R
Sbjct: 750 LATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHPESPVHTEPMGIQGRGRQT 809
Query: 1087 --SILTLSKEPGHQKGKERRSVLECRNKGVLMFPEKSPSI----DLTQSNPDHS------ 1134
++ + KE + G ER + K + PE+ + +LT+ D
Sbjct: 810 VDKVMGIPKETAERVGPERGPLERETEK---LLPERQTDVTGEEELTKGKQDREQKQLLA 866
Query: 1135 -------SSRSQKSSSKLNEEDEVILLLDSDEELELEQTKMKSISSDPLEEKKALEISPR 1187
S ++ +S+S + + + + +++ EE++ +Q + +++ S E + ++ R
Sbjct: 867 RDTQRQESDKNGESASPERDRESLKVEIETSEEIQEKQVQKQTLPSKAFEREVERPVANR 926
Query: 1188 SCELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPENRGSLGRRGAPWLFCDRESSPSE 1247
C+ E + P+ +L+++ + PE GS ++G + SSP+
Sbjct: 927 ECD---------PAELEEKVPK--VILERDTQRGEPEG-GSQDQKG-------QASSPTP 967
Query: 1248 ASTTDTSWLVPAT--PLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNREGNEVA 1305
L T P+ S S+ + +S R + + P A +R A
Sbjct: 968 EPGVGAGDLPGPTSAPVPSGSQSGGRGSPVSPRRHQKGL--LNCKMPPAEKASR--IRAA 1023
Query: 1306 QKFSVIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPISGD 1365
+K S ++P +CL P P ++ S S+ H P SPL P
Sbjct: 1024 EKVS-----RGDQESPDACLPPTVPEAPAPPQKPLNSQSQKHLAPPPLLSPLLP------ 1072
Query: 1366 RAHFSRRFLKHSPPGPSFLNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSDPPIP-ID 1424
K G + P E+ + ++ + +++R P + P
Sbjct: 1073 --SIKPTVRKTRQDGSQEAPEAPLSS--ELEPFHPKPKIRTRKSSRMTPFPATSAAPEPH 1128
Query: 1425 DCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSCTT 1484
+P++P P RT S +P + A + + P P+ T+
Sbjct: 1129 PSTSTAQPVTPKPTSQATRSRTNRSSVKTPEPVVPTAPELQ----PSTSTDQPVTSEPTS 1184
Query: 1485 QRKLQEKSSGAGSLGNSRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGLET 1544
Q KS S + + + +AL RP + P +Q + G + ++T
Sbjct: 1185 QVTRGRKSR---SSVKTPETVVPTALELQPSTSTDRPVTSEPTSQ--ATRGRKNRSSVKT 1239
Query: 1545 PKGANRKKNLPPKVPITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQ 1604
P+ P VP P Q S + E R R V + + +
Sbjct: 1240 PE---------PVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSVKTPEPVVPTAPE 1290
Query: 1605 TLDSDSEDESQSSQPLLQAPHCQTLASQTYKPSRAGVHAQQEATTGPGAHRPKGPAKTKG 1664
S S D + +P + +T S P V E +P P T
Sbjct: 1291 LRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETV-VPTAPELQISTSTDQPVTPKPTSR 1349
Query: 1665 PRHQRKHHESI-TPPSRSP-TKEAPPGLNDDAQIPASQESVAT 1705
R + S+ P S P E PP + + + S AT
Sbjct: 1350 TTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRAT 1392
Score = 36.6 bits (83), Expect = 0.23
Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 39/196 (19%)
Query: 30 SSEDQPESLKTGQMMDESDEDFKELCASFFQRVKKHGIKEVSGERKTQKAASNGTQIRSK 89
S E ESLK + E+ E+ +E ++V+K + + ER+ ++ +N ++
Sbjct: 882 SPERDRESLK---VEIETSEEIQE------KQVQKQTLPSKAFEREVERPVANRECDPAE 932
Query: 90 LK-RTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVL---A 145
L+ + + + T +G +P GSQ K QAS P G L
Sbjct: 933 LEEKVPKVILERDTQRG----EPEGGSQDQ--------KGQASSPTPEPGVGAGDLPGPT 980
Query: 146 SAPDP----------PVLRETAQNTQTGNQQEPSPNLSREKTRENVPNSDSQPPPSCLTT 195
SAP P PV Q + P+ SR + E V D + P +CL
Sbjct: 981 SAPVPSGSQSGGRGSPVSPRRHQKGLLNCKMPPAEKASRIRAAEKVSRGDQESPDACLPP 1040
Query: 196 AVPS----PSKPRTAQ 207
VP P KP +Q
Sbjct: 1041 TVPEAPAPPQKPLNSQ 1056
Score = 36.6 bits (83), Expect = 0.23
Identities = 111/548 (20%), Positives = 188/548 (34%), Gaps = 92/548 (16%)
Query: 1060 RSRGGTSQVGSPTLLSPAVPSKQKRDRSILTLSKEPGHQ--KGKERRSVLECRNKGVLMF 1117
R R S +P L P P + + ++ EP Q +G+ RS ++ V
Sbjct: 1393 RGRKNRSSGKTPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGRTNRSSVKTPETVVPTA 1452
Query: 1118 PEKSPSIDLTQ---SNPDHSSSRSQKSSSKLNEEDEVILLLDSDEELELEQTKMKSISSD 1174
PE PS Q P ++R + S + + V+ + EL+ + + ++S+
Sbjct: 1453 PELQPSTSTDQPVTPEPTSQATRGRTDRSSVKTPETVV---PTAPELQASASTDQPVTSE 1509
Query: 1175 PLEEKKALEISPRSCELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPENRGSLGRRGA 1234
P + S + + V A E S + V + P +R + GR
Sbjct: 1510 PTSRTTRGRKNRSSVKTPETV-VPAAPELQPSTSTDQPVTPE------PTSRATRGR--- 1559
Query: 1235 PWLFCDRESSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRA 1294
++ S T ++ +VP P + Q S+ R+ L T R
Sbjct: 1560 --------TNRSSVKTPES--IVPIAP----------ELQPSTSRNQLVTPEPTSRATRC 1599
Query: 1295 SVGNREGNEVAQKFSVIRPQTPPPQTPSSCLTPVSPGTSD--GRRQGHRSPSRPHPGGHP 1352
NR + + + P P P +S PV+P + RR+ +RS + P
Sbjct: 1600 RT-NRSSVKTPEP---VVPTAPEPHPTTSTDQPVTPKLTSRATRRKTNRSSVKTPKPVEP 1655
Query: 1353 HSSPLAPHP-----------ISGDRAHFSRRFLKHSPP--------GPSFLNQTPAGEVV 1393
+S L P G ++ R + P P +Q + E +
Sbjct: 1656 AASDLEPFTPTDQSVTPEAIAQGGQSKTLRSSTVRAMPVPTTPEFQSPVTTDQPISPEPI 1715
Query: 1394 EVGDSDDEQEVASHQANRSPPLDSDPPIPIDDCCWHMEPLSPIPID-HWNLERTGPLSTS 1452
Q A + + + P+D P C +EP S + W R T+
Sbjct: 1716 TQPSCIKRQRAAGNPGSLAAPIDHKP------CSAPLEPKSQASRNQRWGAVRAAESLTA 1769
Query: 1453 SPSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFLNSALWD 1512
P + SP LL+ TPI S + + +S L +L
Sbjct: 1770 IP-----------EPASPQLLE-TPIHASQIQKVEPAGRSRFTPELQPKASQSRKRSLAT 1817
Query: 1513 VWDGEEQRPPETPPPAQM------PSAGGAQKP---EGLETPKGANRKKNLPPKVPITPM 1563
+ Q+ P+ +Q A+KP E + TPK RK++ + P +
Sbjct: 1818 MDSPPHQKQPQRGEVSQKTVIIKEEEEDTAEKPGKEEDVVTPKPGKRKRDQAEEEP-NRI 1876
Query: 1564 PQYSIMET 1571
P S+ T
Sbjct: 1877 PSRSLRRT 1884
Score = 35.8 bits (81), Expect = 0.39
Identities = 84/409 (20%), Positives = 137/409 (33%), Gaps = 52/409 (12%)
Query: 92 RTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDPP 151
R +QT K + P E G + R +R T+ E V GE + D
Sbjct: 805 RGRQTVDKVMGI--PKETAERVGPE--RGPLERETEKLLPERQTDVTGEEELTKGKQDRE 860
Query: 152 ----VLRETAQNTQTGNQQEPSPNLSREKTRENVPNSDSQPPPSCLTTAVPSPSKPRTAQ 207
+ R+T + N + SP RE + + S+ +PS + R
Sbjct: 861 QKQLLARDTQRQESDKNGESASPERDRESLKVEIETSEEIQEKQVQKQTLPSKAFERE-- 918
Query: 208 LVLQRMQQFKRADPERLRHASEECSLEAAREENVPKDPQEEMMAGNVYGLGPPAPESDAA 267
++R + DP L + LE + P+ ++ P PE
Sbjct: 919 --VERPVANRECDPAELEEKVPKVILERDTQRGEPEGGSQDQKG----QASSPTPEPGVG 972
Query: 268 VALTLQQEFARVGASAHDDS--------LEEKGLFFCQI-----CQKNLSAMNVTRREQH 314
A V + + +KGL C++ + +A V+R +Q
Sbjct: 973 AGDLPGPTSAPVPSGSQSGGRGSPVSPRRHQKGLLNCKMPPAEKASRIRAAEKVSRGDQ- 1031
Query: 315 VNRCLDEAEKTLRPSVPQIPECPICGKPFLTLKSRTSHLKQCAVKMEVGPQLLLQAVRLQ 374
+ + L P+VP+ P P KP L S++ K A + P L ++
Sbjct: 1032 -----ESPDACLPPTVPEAPAPP--QKP---LNSQSQ--KHLAPPPLLSPLLPSIKPTVR 1079
Query: 375 TAQPEGSSSPPMFSFSDHSRGLKRRGPTSKKEPRKRRKVDEAPSEDLLVAMALSRSEMEP 434
+ +GS P S L+ P K RK ++ P+ S S +P
Sbjct: 1080 KTRQDGSQEAPEAPLSSE---LEPFHPKPKIRTRKSSRMTPFPATSAAPEPHPSTSTAQP 1136
Query: 435 GAAVPALRLESAFSERIRPEAENKSRKKKPPVSPPLLLVQDSETTGRQI 483
P S+ R S K PV P +Q S +T + +
Sbjct: 1137 VTPKPT-------SQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPV 1178
Score = 35.4 bits (80), Expect = 0.51
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 18/144 (12%)
Query: 147 APDPPVLRETAQNT-QTGNQQEPSPNLSRE----------KTREN-----VPNSDSQPPP 190
+P P ++ T + T Q G+Q+ P LS E +TR++ P + + P P
Sbjct: 1068 SPLLPSIKPTVRKTRQDGSQEAPEAPLSSELEPFHPKPKIRTRKSSRMTPFPATSAAPEP 1127
Query: 191 SCLT-TAVPSPSKPRTAQLVLQRMQQFKRADPERLRHASEECSLEAAREENVPKDPQEEM 249
T TA P KP T+Q R + PE + + E + ++ V +P ++
Sbjct: 1128 HPSTSTAQPVTPKP-TSQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQV 1186
Query: 250 MAGNVYGLGPPAPESDAAVALTLQ 273
G PE+ AL LQ
Sbjct: 1187 TRGRKSRSSVKTPETVVPTALELQ 1210
Score = 33.9 bits (76), Expect = 1.5
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 1051 TSGSSLSTPRSRGGTSQVGSPTLLSPAVPSKQKRDRSILTLSKEPGHQ--KGKERRSVLE 1108
TS + T R R S V +P + PA P Q + ++ EP + +G+ RS ++
Sbjct: 1507 TSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQPVTPEPTSRATRGRTNRSSVK 1566
Query: 1109 CRNKGVLMFPEKSPSI---DLTQSNPDHSSSRSQKSSSKLNEEDEVI 1152
V + PE PS L P ++R + + S + + V+
Sbjct: 1567 TPESIVPIAPELQPSTSRNQLVTPEPTSRATRCRTNRSSVKTPEPVV 1613
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 54.7 bits (130), Expect = 8e-07
Identities = 127/562 (22%), Positives = 195/562 (34%), Gaps = 94/562 (16%)
Query: 898 KQWDKVEEMEPLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAPEQEAPEEALGHSS 957
+Q DK L+ R+ AA E LP A AP PEEAL +
Sbjct: 1249 QQQDKPPRFRRLKQERENAARGSEGKPSLTLP-----------ASAP---GPEEALTTVT 1294
Query: 958 CSSPSRDCQAERKEGSLPHSDDAGDYEQLFSST-------QGEISEPSQITSEPEE---- 1006
+ R A+ + S +SD A + + S + +G+ P + P+
Sbjct: 1295 VAPAPRRAAAKSPDLSNQNSDQANEEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTP 1354
Query: 1007 --------------QSGAVRERGLEVSHRLAPWQASPPHPCRFLLGPPQGGSPRGSHHTS 1052
G + +R ++S R + + P R P GG S +S
Sbjct: 1355 GGGGGGAVPGISAMSRGDLSQRAKDLSKR--SFSSQRPGMERQNRRPGPGGKAGSSGSSS 1412
Query: 1053 GSSLSTPRSRGGTSQVGSPTLLSPAVPSKQKRDRSI-LTLSKEPGHQKGKERRSVLECRN 1111
G P R G + + SP S+ +R L L P R + N
Sbjct: 1413 GGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSN 1472
Query: 1112 -----KGVLMFPEKSPSIDLTQSNPDHSSSRSQKSSSKLN------EEDEVILLLDSDEE 1160
+ + + S+ +P H Q E V L SD
Sbjct: 1473 PAGIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGPSPRPPTRYEPQRVNSGLSSDPH 1532
Query: 1161 LELEQTKMKSISSDPLEEK-------KALEISPRSCELFSIIDVDADQEPSQSPPRSEAV 1213
E ++ + P + K E PR EL QE S PP S
Sbjct: 1533 FEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELL--------QEESLPPPHSSGF 1584
Query: 1214 LQQEDEGALP--ENRGSLGRRGAPWLFCDRESSPSEASTTDTS---WLVPATPLASRSRD 1268
L + EG P E+R + P ++ ++ S S +S W+ P +P
Sbjct: 1585 LGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFED---- 1640
Query: 1269 CSSQTQISSLRSGLAVQAVTQHT--PRASVGNREGN-EVAQKFSVIRPQTPPPQTPSSCL 1325
+ T++S SG+ + +Q + P + + +G + A + RP P C
Sbjct: 1641 -VAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCE 1699
Query: 1326 TPVSPGTSDGRRQGHRSPSRPHPGGH---PHSSPLAPHPISGDRAHFSRRFLKHSPPGPS 1382
P PG+ RR P PH G P PL P PI +R S+R + + PGP
Sbjct: 1700 GP--PGSEPPRRP----PPAPHDGDRKELPREQPLPPGPIGTER---SQRTDRGTEPGPI 1750
Query: 1383 FLNQTPAGEVVEVGDSDDEQEV 1404
+ P G V+ G SD + ++
Sbjct: 1751 RPSHRP-GPPVQFGTSDKDSDL 1771
Score = 34.3 bits (77), Expect = 1.1
Identities = 56/237 (23%), Positives = 82/237 (34%), Gaps = 39/237 (16%)
Query: 1525 PPPAQMPSAGGAQKPEGLETPKGANR-------KKNLPPKVPITPMPQYSIMETPVLKK- 1576
PP P G Q P TP G +R + + PP + P+ + SI++ LK+
Sbjct: 256 PPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMRLVEPVGRPSILKEDNLKEF 315
Query: 1577 -ELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDE-------SQSSQPLLQAPHC-- 1626
+LD+ + E +++ + DS++E SQS+ + P
Sbjct: 316 DQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAEGHRDSQSASGEERPPEADG 375
Query: 1627 ---QTLASQTYKPSRAGVHAQQEATTGPGAHRPKGPAKTKGPRHQRKHHESITPPSRSPT 1683
+ S+ P A + T PG PK P + PP R P
Sbjct: 376 KKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPP---------------LPPPHRGPA 420
Query: 1684 KE-APPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAGEEEGEGE 1739
PPG D P + D + QSSS E A E A E E
Sbjct: 421 GNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSS--EISLAVERARRRREEEE 475
Score = 32.0 bits (71), Expect = 5.7
Identities = 65/266 (24%), Positives = 95/266 (35%), Gaps = 49/266 (18%)
Query: 401 PTSKKEPRKRRKVDEAPSEDLLVAMALSRSEMEPGAAVPALRLESAFSERIRPEAENKSR 460
P P+K PS++ L + ++ PG P R S + E + R
Sbjct: 1188 PAKSLAPKKPPTGPLPPSKEPL------KEKLIPGPLSPVARGGSNGGSNVGMEDGERPR 1241
Query: 461 KKK-----PPVSPPLL--LVQDSETTGRQIEDRVALLLSEEVELSSTPPLPASRILKEGW 513
+++ PP L Q+ E R E + +L L PAS E
Sbjct: 1242 RRRHGRAQQQDKPPRFRRLKQERENAARGSEGKPSLTL------------PASAPGPEEA 1289
Query: 514 ERAGQCPPPPERKQSFLWEGSALTGAWAMEDFYTARLVPPLVPQRPAQGLMQEPVPPLVP 573
P P R + + S A E++ TA +R +G + P P L+
Sbjct: 1290 LTTVTVAPAPRRAAAKSPDLSNQNSDQANEEWETASESSDFTSER--RGDKEAPPPVLLT 1347
Query: 574 PEHSELSERRSPALHGTPTAGCGSRGPSPSASQREHQALQDLVDLAREGLSA-------- 625
P+ GTP G G P SA R + Q DL++ S+
Sbjct: 1348 PKAV-----------GTPGGGGGGAVPGISAMSRGDLS-QRAKDLSKRSFSSQRPGMERQ 1395
Query: 626 SPWPGSGGLAGSEGTA--GLDVVPGG 649
+ PG GG AGS G++ G PGG
Sbjct: 1396 NRRPGPGGKAGSSGSSSGGGGGGPGG 1421
>gi|115430108 rho-related BTB domain containing 3 [Homo sapiens]
Length = 611
Score = 49.7 bits (117), Expect = 3e-05
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 685 VNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQYVNNEGFSAVEDGVLTQRVLLGDVS 744
+N P L+DV F+ G + AH+ +L ARC ++ N A VL + + VS
Sbjct: 414 LNKPMLADVVFEIQ-GTTVPAHRAILVARCEVMAAMFNGNYMEA--KSVL---IPVYGVS 467
Query: 745 TEAARTFLHYLYTADTGLPPGLSSELSSL--AHRFGVSELVHLCEQVPIATDSEGKPWEE 802
E +FL YLYT D+ P G+ + L A + VS L H+CE + I T + P E
Sbjct: 468 KETFLSFLEYLYT-DSCCPAGIFQAMCLLICAEMYQVSRLQHICE-LFIITQLQSMPSRE 525
Query: 803 KEAENCE 809
+ N +
Sbjct: 526 LASMNLD 532
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 49.3 bits (116), Expect = 3e-05
Identities = 84/373 (22%), Positives = 138/373 (36%), Gaps = 51/373 (13%)
Query: 1350 GHPHSSPLAPHPISGDRAHFSRRFLKHSPPGPSFLNQ-------TPAGEVVEVGDSDDEQ 1402
G+P + LAP S + S + P P L + T V E DE+
Sbjct: 2101 GNPEAVALAPDAYSTGSSSASSTLKRTKKPRPPSLKKKQTTKKPTETPPVKETQQEPDEE 2160
Query: 1403 EV-------ASHQANRSPPLDSDPPIPIDDCCWH--MEPLSPIPIDHWNLERTGPLSTSS 1453
+ AS S + P +++ + P + P+D + E P S
Sbjct: 2161 SLVPSGENLASETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVP-PASG 2219
Query: 1454 PSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFLNSALWDV 1513
R N R L T P G T ++ S A L + R F S
Sbjct: 2220 GGRVQNSPPVGRKTLP---LTTAPEAGEVTPSDSGGQEDSPAKGL-SVRLEFDYSEDKSS 2275
Query: 1514 WDGEEQRPPET-----PPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPITPMPQYSI 1568
WD +++ PP T P A+MP ++P+ +TP+ + PP+ P P
Sbjct: 2276 WDNQQENPPPTKKIGKKPVAKMP----LRRPKMKKTPEKLDNTPASPPRSPAEP------ 2325
Query: 1569 METPVLKK----ELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSSQPLLQAP 1624
+ P+ K ++D++ K++E + Q+ + D + +S P +
Sbjct: 2326 NDIPIAKGTYTFDIDKWDDPNFNPFSSTSKMQESPKLPQQSYNFDPDTCDESVDPFKTS- 2384
Query: 1625 HCQTLASQTYKPSRAGVHA---QQEATTGPGAHRP----KGPAKTKGPRHQR--KHHESI 1675
+T +S + P+ + A + G G ++P K P KT R ++ K
Sbjct: 2385 -SKTPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKKKKTPLKTDTFRVKKSPKRSPLS 2443
Query: 1676 TPPSRSPTKEAPP 1688
PPS+ PT A P
Sbjct: 2444 DPPSQDPTPAATP 2456
Score = 35.8 bits (81), Expect = 0.39
Identities = 99/496 (19%), Positives = 163/496 (32%), Gaps = 102/496 (20%)
Query: 1264 SRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNREGNEVAQKFSVIRPQTPPPQTPSS 1323
S+ ++ + + R G+A VT P A+ E + V +K S ++P P PQ P+
Sbjct: 225 SQEKEAAGGFPPAESRQGVASVQVTPEAPAAAQQGTESSAVLEK-SPLKPMAPIPQDPA- 282
Query: 1324 CLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPISGDRAHFSRRFLKHSPPGPSF 1383
P SD R +P P ++ D L S G +
Sbjct: 283 ------PRASDRERGQGEAP---------------PQYLTDDLEFLRACHLPRSNSGAA- 320
Query: 1384 LNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSDPPIPIDDCCWHMEPLSPIPIDHWNL 1443
P EV +Q V ++ + P W L
Sbjct: 321 ----PEAEVNAASQESCQQPVGAYLPHAELP--------------------------WGL 350
Query: 1444 ERTGPLSTSSPSRRMNEAADSRDCRS---PGLLDTTPIRGSCTTQRKLQEKSSGAGSLGN 1500
+ + S + EA D+ D + G+ T P + C E G +
Sbjct: 351 PSPALVPEAGGSGK--EALDTIDVQGHPQTGMRGTKPNQVVCVAAGGQPE----GGLPVS 404
Query: 1501 SRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPI 1560
PS L E P + + S AQ P +E P ++R+ +P+
Sbjct: 405 PEPSLLTPT------------EEAHPASSLASFPAAQIPIAVEEPGSSSRESVSKAGMPV 452
Query: 1561 TPMPQYSIMETPV--LKKELDRFGVR-PLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSS 1617
+ +++ + L++++ G + P+ Q + L+++ E Q
Sbjct: 453 SADAAKEVVDAGLVGLERQVSDLGSKGEHPEGDPGEVPAPSPQERGEHLNTEQSHEVQPG 512
Query: 1618 QPLLQAPHCQTLASQTYKPSRAGVHAQQEATTGPGAHRPKGPAKTKGPRHQRKHHESITP 1677
P P Q+ Q P A E+ GP GP K HE T
Sbjct: 513 VPPPPLPKEQSHEVQPGAPPPPLPKAPSESARGP-----------PGPTDGAKVHEDSTS 561
Query: 1678 PSRSPTKEAPPGLNDDAQIPASQESVATSVDGSD-SSLSSQSSSSCEFGAAFESAGEEE- 1735
P+ + PG P +E DG D +L + S AF S + E
Sbjct: 562 PAVAKEGSRSPG-----DSPGGKEEAPEPPDGGDPGNLQGEDSQ------AFSSKRDPEV 610
Query: 1736 GEGEVSASQAAVQAAD 1751
G+ E+S + ++ D
Sbjct: 611 GKDELSKPSSDAESRD 626
Score = 32.0 bits (71), Expect = 5.7
Identities = 35/129 (27%), Positives = 40/129 (31%), Gaps = 18/129 (13%)
Query: 1300 EGNEVAQKFSVIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAP 1359
EG S RPQ Q P G + SP P P LAP
Sbjct: 1759 EGTAALHGDSPARPQQAKEQPGPERPIPAGDG-----KVCVSSPPEPDETHDPKLQHLAP 1813
Query: 1360 HPISGDRAHFSRRFLKHSP-PGPSFLNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSD 1418
+ DR SP PGPS L P + V D E + S P+ D
Sbjct: 1814 EELHTDR---------ESPRPGPSMLPSVPKKDAPRVMDKVTSDETRGAEGTESSPVADD 1864
Query: 1419 ---PPIPID 1424
P P D
Sbjct: 1865 IIQPAAPAD 1873
Score = 31.2 bits (69), Expect = 9.7
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 18/119 (15%)
Query: 99 KTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVN--GEGGVLASAP-----DP- 150
+T + Q P +PP SQ + K+Q A S+ G GG ++ DP
Sbjct: 12 RTLSAQTPRSAQPPGNSQNIKRKQQDTPGSPDHRDASSIGSVGLGGFCTASESSASLDPC 71
Query: 151 ---PVLRETAQNTQTGNQQE------PSPNLSREKTRENVPNSDSQPPPSCLTTAVPSP 200
P + E ++ Q E P P+ RE ++P ++ PP CL + +P
Sbjct: 72 LVSPEVTEPRKDPQGARGPEGSLLPSPPPSQEREHPSSSMPFAEC-PPEGCLASPAAAP 129
>gi|45827755 transforming, acidic coiled-coil containing protein 2
isoform b [Homo sapiens]
Length = 1094
Score = 49.3 bits (116), Expect = 3e-05
Identities = 84/373 (22%), Positives = 138/373 (36%), Gaps = 51/373 (13%)
Query: 1350 GHPHSSPLAPHPISGDRAHFSRRFLKHSPPGPSFLNQ-------TPAGEVVEVGDSDDEQ 1402
G+P + LAP S + S + P P L + T V E DE+
Sbjct: 247 GNPEAVALAPDAYSTGSSSASSTLKRTKKPRPPSLKKKQTTKKPTETPPVKETQQEPDEE 306
Query: 1403 EV-------ASHQANRSPPLDSDPPIPIDDCCWH--MEPLSPIPIDHWNLERTGPLSTSS 1453
+ AS S + P +++ + P + P+D + E P S
Sbjct: 307 SLVPSGENLASETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVP-PASG 365
Query: 1454 PSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFLNSALWDV 1513
R N R L T P G T ++ S A L + R F S
Sbjct: 366 GGRVQNSPPVGRKTLP---LTTAPEAGEVTPSDSGGQEDSPAKGL-SVRLEFDYSEDKSS 421
Query: 1514 WDGEEQRPPET-----PPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPITPMPQYSI 1568
WD +++ PP T P A+MP ++P+ +TP+ + PP+ P P
Sbjct: 422 WDNQQENPPPTKKIGKKPVAKMP----LRRPKMKKTPEKLDNTPASPPRSPAEP------ 471
Query: 1569 METPVLKK----ELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSSQPLLQAP 1624
+ P+ K ++D++ K++E + Q+ + D + +S P +
Sbjct: 472 NDIPIAKGTYTFDIDKWDDPNFNPFSSTSKMQESPKLPQQSYNFDPDTCDESVDPFKTS- 530
Query: 1625 HCQTLASQTYKPSRAGVHA---QQEATTGPGAHRP----KGPAKTKGPRHQR--KHHESI 1675
+T +S + P+ + A + G G ++P K P KT R ++ K
Sbjct: 531 -SKTPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKKKKTPLKTDTFRVKKSPKRSPLS 589
Query: 1676 TPPSRSPTKEAPP 1688
PPS+ PT A P
Sbjct: 590 DPPSQDPTPAATP 602
>gi|45827753 transforming, acidic coiled-coil containing protein 2
isoform c [Homo sapiens]
Length = 996
Score = 49.3 bits (116), Expect = 3e-05
Identities = 84/373 (22%), Positives = 138/373 (36%), Gaps = 51/373 (13%)
Query: 1350 GHPHSSPLAPHPISGDRAHFSRRFLKHSPPGPSFLNQ-------TPAGEVVEVGDSDDEQ 1402
G+P + LAP S + S + P P L + T V E DE+
Sbjct: 179 GNPEAVALAPDAYSTGSSSASSTLKRTKKPRPPSLKKKQTTKKPTETPPVKETQQEPDEE 238
Query: 1403 EV-------ASHQANRSPPLDSDPPIPIDDCCWH--MEPLSPIPIDHWNLERTGPLSTSS 1453
+ AS S + P +++ + P + P+D + E P S
Sbjct: 239 SLVPSGENLASETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVP-PASG 297
Query: 1454 PSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFLNSALWDV 1513
R N R L T P G T ++ S A L + R F S
Sbjct: 298 GGRVQNSPPVGRKTLP---LTTAPEAGEVTPSDSGGQEDSPAKGL-SVRLEFDYSEDKSS 353
Query: 1514 WDGEEQRPPET-----PPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPITPMPQYSI 1568
WD +++ PP T P A+MP ++P+ +TP+ + PP+ P P
Sbjct: 354 WDNQQENPPPTKKIGKKPVAKMP----LRRPKMKKTPEKLDNTPASPPRSPAEP------ 403
Query: 1569 METPVLKK----ELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSSQPLLQAP 1624
+ P+ K ++D++ K++E + Q+ + D + +S P +
Sbjct: 404 NDIPIAKGTYTFDIDKWDDPNFNPFSSTSKMQESPKLPQQSYNFDPDTCDESVDPFKTS- 462
Query: 1625 HCQTLASQTYKPSRAGVHA---QQEATTGPGAHRP----KGPAKTKGPRHQR--KHHESI 1675
+T +S + P+ + A + G G ++P K P KT R ++ K
Sbjct: 463 -SKTPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKKKKTPLKTDTFRVKKSPKRSPLS 521
Query: 1676 TPPSRSPTKEAPP 1688
PPS+ PT A P
Sbjct: 522 DPPSQDPTPAATP 534
>gi|11119414 transforming, acidic coiled-coil containing protein 2
isoform d [Homo sapiens]
Length = 1026
Score = 49.3 bits (116), Expect = 3e-05
Identities = 84/373 (22%), Positives = 138/373 (36%), Gaps = 51/373 (13%)
Query: 1350 GHPHSSPLAPHPISGDRAHFSRRFLKHSPPGPSFLNQ-------TPAGEVVEVGDSDDEQ 1402
G+P + LAP S + S + P P L + T V E DE+
Sbjct: 179 GNPEAVALAPDAYSTGSSSASSTLKRTKKPRPPSLKKKQTTKKPTETPPVKETQQEPDEE 238
Query: 1403 EV-------ASHQANRSPPLDSDPPIPIDDCCWH--MEPLSPIPIDHWNLERTGPLSTSS 1453
+ AS S + P +++ + P + P+D + E P S
Sbjct: 239 SLVPSGENLASETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVP-PASG 297
Query: 1454 PSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFLNSALWDV 1513
R N R L T P G T ++ S A L + R F S
Sbjct: 298 GGRVQNSPPVGRKTLP---LTTAPEAGEVTPSDSGGQEDSPAKGL-SVRLEFDYSEDKSS 353
Query: 1514 WDGEEQRPPET-----PPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPITPMPQYSI 1568
WD +++ PP T P A+MP ++P+ +TP+ + PP+ P P
Sbjct: 354 WDNQQENPPPTKKIGKKPVAKMP----LRRPKMKKTPEKLDNTPASPPRSPAEP------ 403
Query: 1569 METPVLKK----ELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSSQPLLQAP 1624
+ P+ K ++D++ K++E + Q+ + D + +S P +
Sbjct: 404 NDIPIAKGTYTFDIDKWDDPNFNPFSSTSKMQESPKLPQQSYNFDPDTCDESVDPFKTS- 462
Query: 1625 HCQTLASQTYKPSRAGVHA---QQEATTGPGAHRP----KGPAKTKGPRHQR--KHHESI 1675
+T +S + P+ + A + G G ++P K P KT R ++ K
Sbjct: 463 -SKTPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKKKKTPLKTDTFRVKKSPKRSPLS 521
Query: 1676 TPPSRSPTKEAPP 1688
PPS+ PT A P
Sbjct: 522 DPPSQDPTPAATP 534
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 48.9 bits (115), Expect = 4e-05
Identities = 78/408 (19%), Positives = 142/408 (34%), Gaps = 57/408 (13%)
Query: 826 EEEEAETLLKSKDHEEDQ--ENVNEAEMEEIYEFAATQRKLLQEERAAGAGEDADWLEGG 883
E+ E ET++ + EE Q E V E E +E E + + +EE A G E+
Sbjct: 448 EKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETK----- 502
Query: 884 SPVSGQLLAGVQVQKQWDKVEEMEPLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEA 943
SP + + + E E P ++EA + E A+ E
Sbjct: 503 SPPAEEAAS-----------PEKEAKSPVKEEAKSPAE----------------AKSPEK 535
Query: 944 PEQEAPEEALGHSSCSSPSRDCQAERKEGSLPHSDDA------GDYEQLFSSTQGEISEP 997
E ++P E SP+++ E P ++A E+ S + E P
Sbjct: 536 EEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSP 595
Query: 998 SQITSEPEEQSGAVRERGLEVSHRLAPWQASPPHPCRFLLGPPQGGSPRGSHHTSGSSLS 1057
++ S PE+ V+E + +P + P + P + SP S
Sbjct: 596 AEAKS-PEKAKSPVKEEAKSPAEAKSPVKEEAKSPAE-VKSPEKAKSPTKEEAKSPEKAK 653
Query: 1058 TPRSRGGTSQVGSPTLLSPAVPSKQKRDRSILTLSKEPGHQKGKERRSVLECRNKGVLMF 1117
+P S + + + S +K + +K P K + + K
Sbjct: 654 SPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA-KSPEKAKSPV 712
Query: 1118 PEKSPSIDLTQSNPDHSSSRSQKSSSKLNEEDEVILLLDSDEELELEQTKMKSISSDPLE 1177
E++ S + +S + +K+ S + EE + S E+ + K + E
Sbjct: 713 KEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKE 772
Query: 1178 EKKALEISPRSCELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPEN 1225
E ++ D E ++SP + E ++ + L E+
Sbjct: 773 EARS--------------PADKFPEKAKSPVKEEVKSPEKAKSPLKED 806
Score = 48.9 bits (115), Expect = 4e-05
Identities = 93/490 (18%), Positives = 181/490 (36%), Gaps = 45/490 (9%)
Query: 787 EQVPIATDSEGKPWEEKEAENCESRAENFQELLRSMWADEEEEAETLLKSKDHEEDQENV 846
E+ A + EGK E E E E E + A E+EA++ +K E+ ++
Sbjct: 473 EEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVK-----EEAKSP 527
Query: 847 NEAEMEEIYEFAATQRKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQWDKVEEM 906
EA+ E E A + ++ E+A ++ E SP + + + +
Sbjct: 528 AEAKSPE-KEEAKSPAEVKSPEKAKSPAKE----EAKSPPEAKSPEKEEAKSPAEVKSPE 582
Query: 907 EPLEPGRDEAATTWE-KMGQCALPPPQGQHSGARGAEAP---EQEAPEEALGHSSCSSPS 962
+ P ++EA + E K + A P + + A++P E ++P E SP+
Sbjct: 583 KAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPT 642
Query: 963 RDCQAERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITS-------EPEEQSGAVRERG 1015
++ ++ P ++A E+ S + E P + S PE+ V+E
Sbjct: 643 KEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA 702
Query: 1016 LEVSHRLAP--WQASPPHPCRFLL-----GPPQGGSPRGSHHTSGSSLSTPRSRGGTSQV 1068
+P +A P + + P + SP S +P + T V
Sbjct: 703 KSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSP-EKAKTLDV 761
Query: 1069 GSPTLLSPAVPSKQKRDRSILTLSKEPGHQKGKERRSVLECRNKGVLMFPEKSPSIDLTQ 1128
SP +PA + +K P ++ K + K L K+P ++ +
Sbjct: 762 KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPE-----KAKSPLKEDAKAPEKEIPK 816
Query: 1129 SNPDHSSSRSQ--------KSSSKLNEEDEVILLLDSDE--ELELEQTKMKSISSDPLEE 1178
S + + K K EE++ ++E + + E+ K +EE
Sbjct: 817 KEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEE 876
Query: 1179 KKALEI-SPRSCELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPENRGSLGRRGAPWL 1237
KK + P+ ++ + + D++ +P + + E A P+ + + ++
Sbjct: 877 KKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDA 936
Query: 1238 FCDRESSPSE 1247
S P+E
Sbjct: 937 KAKEPSKPAE 946
Score = 32.7 bits (73), Expect = 3.3
Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 12/168 (7%)
Query: 1607 DSDSEDESQSSQPLLQAPHCQTLAS---QTYKPSRAGVHAQQEATTGPGAHRPKGPAKTK 1663
+ E+E++ + ++P + AS + P + + EA + P K PA+ K
Sbjct: 487 EGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKS-PEKEEAKSPAEVK 545
Query: 1664 GPRHQR---KHHESITPPSRSPTKE-----APPGLNDDAQIPASQESVATSVDGSDSSLS 1715
P + K P ++SP KE A + A+ PA +E+ + + S
Sbjct: 546 SPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 605
Query: 1716 SQSSSSCEFGAAFESAGEEEGEGEVSASQAAVQAADTDEALRCYIRSK 1763
S + A +S +EE + + T E + ++K
Sbjct: 606 SPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAK 653
>gi|40807477 retinoic acid induced 1 [Homo sapiens]
Length = 1906
Score = 48.9 bits (115), Expect = 4e-05
Identities = 139/606 (22%), Positives = 204/606 (33%), Gaps = 96/606 (15%)
Query: 1190 ELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPENRGSLGR-----RGAPWLFCDRESS 1244
E + + + P + +QE+ G + E G L + + WL E S
Sbjct: 786 EASACLGFQEEDPPGEKVASLPGDFKQEEVGGVKEEAGGLLQCPEVAKADRWL----EDS 841
Query: 1245 PSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNREGNEV 1304
ST D L P P SR D ++ + SSL L +P G ++
Sbjct: 842 RHCCSTADFGDL-PLLPPTSRKEDLEAEEEYSSLCELLG-------SPEQRPGMQDPLS- 892
Query: 1305 AQKFSVIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPISG 1364
P+ P C D + G SP H G S + P G
Sbjct: 893 -------------PKAPLICTKEEVEEVLDSKA-GWGSPC--HLSGE---SVILLGPTVG 933
Query: 1365 DRAHFSRRF---LKHSPPGPSFLNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSDPPI 1421
+ F L H PG + P GE GDS + + N+ P + PI
Sbjct: 934 TESKVQSWFESSLSHMKPG----EEGPDGERAP-GDSTTSDASLAQKPNK--PAVPEAPI 986
Query: 1422 PIDDCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGS 1481
+ P+P R L + R + EA DS CR+P L + S
Sbjct: 987 AKKE---------PVP-------RGKSLRSRRVHRGLPEAEDS-PCRAPVLPKDLLLPES 1029
Query: 1482 CTTQRKLQEKSSGAGSLGNSR--PSFLNSALWDVWDGEEQRPPE-TPPPAQMPSAGGAQ- 1537
CT + Q + +GA G S P +L + + PP T PA GG Q
Sbjct: 1030 CTGPPQGQMEGAGAPGRGASEGLPRMCTRSLTALSEPRTPGPPGLTTTPAPPDKLGGKQR 1089
Query: 1538 ------KPEGLETPKGANRKKNLPPKVPITPMPQYSIMETPVLKKELDRFGVRPLPKRQM 1591
K G +PK A+ N P +P+ +T KE D +R M
Sbjct: 1090 AAFKSGKRVGKPSPKAASSPSN-PAALPVASDSSPMGSKT----KETDSPSTPGKDQRSM 1144
Query: 1592 VL----KLKEIFQYTHQTLDSDSEDESQSSQPLLQAPHCQTLASQTYKPSRAGVHAQQEA 1647
+L K +EIF + ++++ LL H + P + G +Q+
Sbjct: 1145 ILRSRTKTQEIFHSKRRRPSEGRLPNCRATKKLLDNSHLPATFKVSSSPQKEGRVSQRAR 1204
Query: 1648 TTGPGAHRPKGPAKTKGPRHQRKHHESITPPSRSPTKEAPPGLNDDAQIPASQESVATSV 1707
PGA G + P H K + P PTK+ L S S S
Sbjct: 1205 VPKPGA----GSKLSDRPLHALKRKSAFMAP--VPTKKRNLVLRS-----RSSSSSNASG 1253
Query: 1708 DGSDSSLSSQSSSSCEFG--AAFESAGEEEGEGEVSASQAAVQAADTDEALRCYIRSKPA 1765
+G D S F ++ + A +G GE + + D L + A
Sbjct: 1254 NGGDGKEERPEGSPTLFKRMSSPKKAKPTKGNGEPATKLPPPETPDACLKLASRAAFQGA 1313
Query: 1766 LYQKVL 1771
+ KVL
Sbjct: 1314 MKTKVL 1319
Score = 34.7 bits (78), Expect = 0.88
Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 34/224 (15%)
Query: 25 GIDPRSSEDQPESLKTGQMMDESDEDFKELCASFFQRVKKHGI---KEVSGER--KTQKA 79
G P E+ ++ TGQ + S D LC + R K + K++S KT+
Sbjct: 1372 GGSPVGVEEGLVNVGTGQKLPTSGAD--PLCRNPTNRSLKGKLMNSKKLSSTDCFKTEAF 1429
Query: 80 AS------NGTQIRSKLKRTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEP 133
S GT + K + K A +GP EK+P G T + R + Q +
Sbjct: 1430 TSPEALQPGGTALAPKKRSRKGRAGAHGLSKGPLEKRPYLGPALLLTPRDRASGTQGASE 1489
Query: 134 AHSVNG-------EGGVLASAPD-PPVLRETAQNTQTGNQQEPSPNLSREKTRENVPNSD 185
+S G E G+ + P+ P +T Q G+ S + + TR N+
Sbjct: 1490 DNSGGGGKKPKMEELGLASQPPEGRPCQPQTRAQKQPGHTNYSSYSKRKRLTRGRAKNTT 1549
Query: 186 SQPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPE-RLRHAS 228
S SP K R + Q++ A+PE RL++ S
Sbjct: 1550 S------------SPCKGRAKRRRQQQVLPLDPAEPEIRLKYIS 1581
Score = 34.3 bits (77), Expect = 1.1
Identities = 95/442 (21%), Positives = 151/442 (34%), Gaps = 80/442 (18%)
Query: 940 GAEAPEQEAPEEALGHSSCSSPSRDCQAERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQ 999
G E+ Q E +L H D ER G SD + + + + E
Sbjct: 933 GTESKVQSWFESSLSHMKPGEEGPD--GERAPGDSTTSDASLAQKP----NKPAVPEAPI 986
Query: 1000 ITSEPEEQSGAVRERGLEVSHRLAPWQASPPHPCR-------FLL-----GPPQGGSPRG 1047
EP + ++R R + HR P + PCR LL GPPQG
Sbjct: 987 AKKEPVPRGKSLRSRRV---HRGLP--EAEDSPCRAPVLPKDLLLPESCTGPPQGQMEGA 1041
Query: 1048 SHHTSGSSLSTPR--SRGGTSQVGSPTLLSPAVPSKQKRDRSILTLSKEPGHQKGKERRS 1105
G+S PR +R T+ L P P + T P GK+R +
Sbjct: 1042 GAPGRGASEGLPRMCTRSLTA------LSEPRTPGPP----GLTTTPAPPDKLGGKQRAA 1091
Query: 1106 VLECRNKG-----VLMFPEKSPSIDL-TQSNPDHSSSRSQKSSSKLNEEDEVILLLDSDE 1159
+ G P ++ + + S+P S ++ S S ++ ++L +
Sbjct: 1092 FKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPSTPGKDQRSMILRSRTK 1151
Query: 1160 ELELEQTKMKSISSDPLEEKKALEISPRSCELFSIIDVDADQEPSQSPPRSEAVLQQEDE 1219
E+ +K + S L +A + +L + A + S SP + V Q
Sbjct: 1152 TQEIFHSKRRRPSEGRLPNCRATK------KLLDNSHLPATFKVSSSPQKEGRVSQ---- 1201
Query: 1220 GALPENRGSLGRRGAPWLFCDRESSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLR 1279
R + + GA DR P A ++++ P P R+ S++ SS
Sbjct: 1202 ------RARVPKPGAGSKLSDR---PLHALKRKSAFMAPV-PTKKRNLVLRSRSSSSSNA 1251
Query: 1280 SGLAVQAVTQH------------TPRASVGNREGNEVAQKFSVIRPQTPPPQTPSSCLTP 1327
SG + +P+ + + E A K PPP+TP +CL
Sbjct: 1252 SGNGGDGKEERPEGSPTLFKRMSSPKKAKPTKGNGEPATKL-------PPPETPDACLKL 1304
Query: 1328 VSPGTSDGRRQGHRSPSRPHPG 1349
S G + P R G
Sbjct: 1305 ASRAAFQGAMKTKVLPPRKGRG 1326
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 47.8 bits (112), Expect = 1e-04
Identities = 65/260 (25%), Positives = 79/260 (30%), Gaps = 49/260 (18%)
Query: 1314 QTPPPQTPSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPISGDRAHFSRRF 1373
Q PPPQ P PG +RQG RP P G H S L P S
Sbjct: 459 QRPPPQGG-----PPQPGPGP-QRQGPPLQQRPPPQGQQHLSGLGPPAGSP--------- 503
Query: 1374 LKHSPPGPSFLNQTPAGEVVEVGDSDDEQE-----------VASHQANRSPPLDSDPPIP 1422
L P P+ Q PA + Q A A+ SP + PP
Sbjct: 504 LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPP-- 561
Query: 1423 IDDCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSC 1482
P P G P + A +R G P G
Sbjct: 562 --QATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAG---PVPRTGPP 616
Query: 1483 TTQRKLQEKSSGAGSLGNSRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGL 1542
TTQ Q + SG G G +P Q+P + PP +AGG P+ L
Sbjct: 617 TTQ---QPRPSGPGPAGRPKPQL------------AQKPSQDVPPPATAAAGGPPHPQ-L 660
Query: 1543 ETPKGANRKKNLPPKVPITP 1562
+ NLP P P
Sbjct: 661 NKSQSLTNAFNLPEPAPPRP 680
Score = 37.4 bits (85), Expect = 0.14
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 1650 GPGAHRPKGPAKTKGPRHQRKHHESITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDG 1709
GPG R P + + P ++H + PP+ SP + P Q PASQ + T G
Sbjct: 471 GPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQG 530
Query: 1710 SDS 1712
S
Sbjct: 531 RQS 533
Score = 36.6 bits (83), Expect = 0.23
Identities = 44/191 (23%), Positives = 68/191 (35%), Gaps = 17/191 (8%)
Query: 1371 RRFLKHSPPGPSFLNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSDPPIPIDDCCWHM 1430
R+ + + PG QTP+ + +G +Q A A + PP PP P
Sbjct: 420 RQRQRDASPGRGSHGQTPSPGALPLGRQTSQQP-AGPPAQQRPPPQGGPPQPGPGPQRQG 478
Query: 1431 EPLS--PIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKL 1488
PL P P +L GP + S +R+ + + P P +G R +
Sbjct: 479 PPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAP--QQPASQAAPPTQGQGRQSRPV 536
Query: 1489 QEKSSGAGSLGNSRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGLETPKGA 1548
+ G G+ +RP S QR P + S G P+ P G
Sbjct: 537 ---AGGPGAPPAARPPASPSP---------QRQAGPPQATRQTSVSGPAPPKASGAPPGG 584
Query: 1549 NRKKNLPPKVP 1559
+++ P K P
Sbjct: 585 QQRQGPPQKPP 595
Score = 32.3 bits (72), Expect = 4.4
Identities = 30/113 (26%), Positives = 39/113 (34%), Gaps = 10/113 (8%)
Query: 97 ATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDP-PVLRE 155
AT+ ++ GPA PP S AP +QR P G G A PV R
Sbjct: 563 ATRQTSVSGPA---PPKASGAPPGGQQR------QGPPQKPPGPAGPTRQASQAGPVPRT 613
Query: 156 TAQNTQTGNQQEPSPNLSREKTRENVPNSDSQPPPSCLTTAVPSPSKPRTAQL 208
TQ P P + P+ D PP + P P ++ L
Sbjct: 614 GPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLNKSQSL 666
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 47.8 bits (112), Expect = 1e-04
Identities = 105/519 (20%), Positives = 181/519 (34%), Gaps = 53/519 (10%)
Query: 1246 SEASTTDTSWLVPATPLASRSRDCSSQT--QISSLRSGLAVQAVTQHTPRASVGNREGNE 1303
SEAST T+ + TP+ + + SS T + +S+ + + T T +
Sbjct: 644 SEASTLSTTPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTTLVASS 703
Query: 1304 VAQKFSVIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPIS 1363
A S T P T S+ + SP T+DG +PS S+PL P+S
Sbjct: 704 EASTLSTTPVDTSTPVTTSTEASS-SPTTADGASMPTSTPSE-------GSTPLTSMPVS 755
Query: 1364 GDRAHFSRRFLKHSPPGPSFLNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSDPPIPI 1423
S + P + + T + E + + + + PL + P+ I
Sbjct: 756 KTLLTSSEASTLSTTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSI 815
Query: 1424 DDCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSCT 1483
+P+ + T P+ ++SP E + S TP G+
Sbjct: 816 ----------TPVTSPEASTLSTTPVDSNSPVTTSTEVSSS----------PTPAEGTSM 855
Query: 1484 TQRKLQEKSSGAGSLGNSRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGLE 1543
E + S+ S SA+ + TP P +
Sbjct: 856 PTSTYSEGRTPLTSMPVSTTLVATSAISTL--------STTPVDTSTPVTNSTEARSSPT 907
Query: 1544 TPKGANRKKNLPPK--VPITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQ- 1600
T +G + + P + P+T MP + TPV+ E P+ V E
Sbjct: 908 TSEGTSMPTSTPGEGSTPLTSMPDST---TPVVSSEARTLSATPVDTSTPVTTSTEATSS 964
Query: 1601 -YTHQTLDSDSEDESQSSQPLLQAPHCQTLA--SQTYKPSRAGVHAQQEATTGPGAHRPK 1657
T + + S+ + PL P TL S+ S V + TT A P
Sbjct: 965 PTTAEGTSIPTSTPSEGTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTSTEASSPP 1024
Query: 1658 GPAK-TKGPRHQRKHHESITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSS 1716
A+ T P E TP +R P ++ + + + +T V + S +S
Sbjct: 1025 PTAEGTSMPTSTPS--EGSTPLTRMPVSTTMVASSETSTLSTTPADTSTPV--TTYSQAS 1080
Query: 1717 QSSSSCEFGAAFESAGEEEGEGEVSASQAAVQAADTDEA 1755
SS++ + G + ++ EG +++ + + + EA
Sbjct: 1081 SSSTTAD-GTSMPTSTYSEGSTPLTSVPVSTRLVVSSEA 1118
Score = 45.8 bits (107), Expect = 4e-04
Identities = 112/521 (21%), Positives = 167/521 (32%), Gaps = 85/521 (16%)
Query: 1243 SSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQ------------- 1289
S+PSE S TS V TP+AS S T + S + V+
Sbjct: 1624 STPSEGSPLLTSIPVSTTPVASPEASTLSTTPVDSNSPVITSTEVSSSPTPAEGTSMPTS 1683
Query: 1290 -----HTPRASVGNREGNEVAQKFSVIRPQTPPPQTPSSCLTPV--SPGTSDGRRQGHRS 1342
TP S+ R + S + TP + T SP TS+G + +
Sbjct: 1684 TYTEGRTPLTSITVRTTPVASSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNST 1743
Query: 1343 PSRPHPGGHPHSS-PLAPHPISGDRAHFSRRFLKHSPPGPSFLNQTPAGEVVEVGDSDDE 1401
PS G P +S P++ P+ A S L+ TP V
Sbjct: 1744 PSE---GTTPLTSIPVSTTPVLSSEA--------------STLSATPIDTSTPV------ 1780
Query: 1402 QEVASHQANRSPPLDSDPPIPIDDCCWHMEPLSPIPIDHWNL--ERTGPLSTSSPSRRMN 1459
S +A SP IP M PL+ P+ H + LST+
Sbjct: 1781 --TTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPVSHTLVANSEASTLSTTPVDSNSP 1838
Query: 1460 EAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFLNSALWDVWDGEEQ 1519
+ SP TP G+ E S+ S+ S + +S E
Sbjct: 1839 VVTSTAVSSSP-----TPAEGTSIATSTPSEGSTALTSIPVSTTTVASS--------ETN 1885
Query: 1520 RPPETPPPAQMPSAGGAQKPEGLETPKGANRKKNLP--PKVPITPMPQYSIMETPVLKKE 1577
TP P AQ T G++ + P + P+T +P + T V E
Sbjct: 1886 TLSTTPAVTSTPVTTYAQVSSSPTTADGSSMPTSTPREGRPPLTSIP---VSTTTVASSE 1942
Query: 1578 LDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDE---SQSSQPLLQAPHCQTLA---- 1630
++ R V + + T D S S+ S PL P TL
Sbjct: 1943 INTLSTTLADTRTPVTTYSQA-SSSPTTADGTSMPTPAYSEGSTPLTSMPLSTTLVVSSE 2001
Query: 1631 --------SQTYKPSRAGVHAQQEATTGPGAH-RPKGPAKTKGPRHQRKHHESITPPSRS 1681
T P+ TT G + P++ P ++ S
Sbjct: 2002 ASTLSTTPVDTSTPATTSTEGSSSPTTAGGTSIQTSTPSERTTPLAGMPVSTTLVVSSEG 2061
Query: 1682 PTKEAPPGLNDDAQIPASQE-SVATSVDGSDSSLSSQSSSS 1721
T P ++ Q+ S E S + + +GS ++S+ S S
Sbjct: 2062 NTLSTTP-VDSKTQVTNSTEASSSATAEGSSMTISAPSEGS 2101
Score = 42.7 bits (99), Expect = 0.003
Identities = 108/507 (21%), Positives = 168/507 (33%), Gaps = 74/507 (14%)
Query: 1243 SSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNR--- 1299
S+ SE ST T V TP+ S + S T + + + + +P S G
Sbjct: 3098 STYSEGSTPLTGVPVSTTPVTSSAISTLSTTPVDT-STPVTTSTEAHSSPTTSEGTSMPT 3156
Query: 1300 ----EGNE------VAQKFSVIRPQTPPPQTPSSCLTPVSPGT---SDGRRQGHRSP-SR 1345
EG+ V+ V + TP TPV+ T S +G P S
Sbjct: 3157 STPSEGSTPLTYMPVSTMLVVSSEDSTLSATPVDTSTPVTTSTEATSSTTAEGTSIPTST 3216
Query: 1346 PHPGGHPHSS-PLAPHPISGDRAHFSRRFLKHSPPGPSFLNQTPAGEVVEVGDSDDEQEV 1404
P G P +S P++ P++ A S L+ TP +
Sbjct: 3217 PSEGMTPLTSVPVSNTPVASSEA--------------SILSTTPVDSNTPL--------T 3254
Query: 1405 ASHQANRSPPLDSDPPIPIDDCCWHMEPLSPIPIDHWNL--ERTGPLSTSSPSRRMNEAA 1462
S +A+ SPP +P PL+ +P+ + T LST+
Sbjct: 3255 TSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTT 3314
Query: 1463 DSRDCRSPGLLDTTPIRGSCTTQRK--LQEKSSGAGSLGNSRPSFLNSALWDVWDGEEQR 1520
S+ SP + D T + S ++ L S + +S S L++ D
Sbjct: 3315 YSQASSSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTPVDT------- 3367
Query: 1521 PPETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPITPMPQYSIMETPVLKKELDR 1580
TP ++ EG P + P TP+ + TPV+ E++
Sbjct: 3368 --STPVTTSTEASLSPTTAEGTSIPTSS-------PSEGTTPLASMPVSTTPVVSSEVNT 3418
Query: 1581 FGVRPLPKRQMVLKLKE------IFQYTHQTLDSDSEDESQ-SSQPLLQAPHCQTLASQT 1633
P+ +V E I + T + SE + S PL P + AS
Sbjct: 3419 LSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVASSEASTL 3478
Query: 1634 YKPSRAGVHAQQEATT-GPGAHRPKGPAKTKGPRHQRKHHESITPPSRSPTKEAPPGLND 1692
S V TT P P T P E TP + P P ++
Sbjct: 3479 ---STTPVDTSTPVTTSSPTNSSPTTAEVTSMPTSTA--GEGSTPLTNMPVSTTPVASSE 3533
Query: 1693 DAQIPASQESVATSVDGSDSSLSSQSS 1719
+ + + T V S + SS ++
Sbjct: 3534 ASTLSTTPVDSNTFVTSSSQASSSPAT 3560
Score = 42.4 bits (98), Expect = 0.004
Identities = 109/518 (21%), Positives = 168/518 (32%), Gaps = 78/518 (15%)
Query: 1243 SSPSEASTTDTSWLVPATPLASRSRDCSSQTQI--------SSLRSGLAVQAVTQHTPRA 1294
S+PSE ST+ TS LV P+AS S T + S+ S A P +
Sbjct: 2626 STPSEVSTSLTSILVSTMPVASSEASTLSTTPVDTRTLVTTSTGTSSSPTTAEGSSMPTS 2685
Query: 1295 SVGNRE-------------GNEVAQKFSVIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHR 1341
+ G R N A S T P T +S SP T++G
Sbjct: 2686 TPGERSTPLTNILVSTTLLANSEASTLSTTPVDTSTPVT-TSAEASSSPTTAEGTSMRIS 2744
Query: 1342 SPSRPHPGGHPHSSPL-APHPISGDRAHFSRRFLKHSPPGPSFLNQTPAGEVVEVGDSDD 1400
+PS G P +S L + P++ A S ++ T + V
Sbjct: 2745 TPS---DGSTPLTSILVSTLPVASSEA--------------STVSTTAVDTSIPV----- 2782
Query: 1401 EQEVASHQANRSPPLDSDPPIPIDDCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNE 1460
S +A+ SP +P PL+ +P++H P+++S
Sbjct: 2783 ---TTSTEASSSPTTAEVTSMPTSTPSETSTPLTSMPVNH------TPVASSEAGTLSTT 2833
Query: 1461 AADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFLNSALWDVWDGEEQR 1520
D+ S + +T S TT + S A S G++ + + + V E
Sbjct: 2834 PVDT----STPVTTSTKASSSPTTAEGIVVPISTA-SEGSTLLTSIPVSTTPVASSEAST 2888
Query: 1521 PPETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPITPMPQYSIMETPVLKKELDR 1580
TP +P + T +G + + P +V TP+ + PV E
Sbjct: 2889 LSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPISTPSEVS-TPLTSILVSTVPVAGSEAST 2947
Query: 1581 FGVRPLPKRQMVLKLKE------IFQYTHQTLDSDSE------DESQSSQPLL--QAPHC 1626
P+ R V E + T + + E S S+ P+ +A
Sbjct: 2948 LSTTPVDTRTPVTTSAEASSSPTTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEASTL 3007
Query: 1627 QTLASQTYKPSRAGVHAQQEATTGPGAHRPKGPAKTKGPRHQRKHHESITP---PSRSPT 1683
+ T P A TT G P ++G S TP P S
Sbjct: 3008 SRTPADTSTPVTTSTEASSSPTTAEGTGIPIS-TPSEGSTPLTSIPVSTTPVAIPEASTL 3066
Query: 1684 KEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSS 1721
P N S T +G+ +S+ S S
Sbjct: 3067 STTPVDSNSPVVTSTEVSSSPTPAEGTSMPISTYSEGS 3104
Score = 41.2 bits (95), Expect = 0.009
Identities = 99/519 (19%), Positives = 159/519 (30%), Gaps = 67/519 (12%)
Query: 1241 RESSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNRE 1300
R S+PS+ ST TS LV P+AS S T + + S+
Sbjct: 2742 RISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDT-----------------SIPVTT 2784
Query: 1301 GNEVAQKFSVIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPH 1360
E + + + P TPS TP++ P P + L+
Sbjct: 2785 STEASSSPTTAEVTSMPTSTPSETSTPLT-----------SMPVNHTPVASSEAGTLSTT 2833
Query: 1361 PISGDRAHFSRRFLKHSPPGPSFLNQTPAGEVVEVGDSDD-----------EQEVASHQA 1409
P+ + SP T G VV + + + VAS +A
Sbjct: 2834 PVDTSTPVTTSTKASSSP-------TTAEGIVVPISTASEGSTLLTSIPVSTTPVASSEA 2886
Query: 1410 NRSPPLDSDPPIPIDDCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRS 1469
+ D IP+ SP + ++ + P S+P + +
Sbjct: 2887 STLSTTPVDTSIPVTTSTEGSS--SPTTAEGTSMPISTPSEVSTPLTSILVSTVPVAGSE 2944
Query: 1470 PGLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRP-----------SFLNSALWDVWDGEE 1518
L TTP+ + SS + G S P + ++ + V E
Sbjct: 2945 ASTLSTTPVDTRTPVTTSAEASSSPTTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEA 3004
Query: 1519 QRPPETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPITPMPQYSIMETPVLKKEL 1578
TP P + T +G + P + TP+ + TPV E
Sbjct: 3005 STLSRTPADTSTPVTTSTEASSSPTTAEGTGIPISTPSE-GSTPLTSIPVSTTPVAIPEA 3063
Query: 1579 DRFGVRPLPKRQMVLKLKEIFQ--YTHQTLDSDSEDESQSSQPLLQAPHCQT--LASQTY 1634
P+ V+ E+ + S+ S PL P T +S
Sbjct: 3064 STLSTTPVDSNSPVVTSTEVSSSPTPAEGTSMPISTYSEGSTPLTGVPVSTTPVTSSAIS 3123
Query: 1635 KPSRAGVHAQQEATTGPGAHRPKGPAKTKGPRHQRK-HHESITPPSRSPTKEAPPGLNDD 1693
S V TT AH P ++G E TP + P ++D
Sbjct: 3124 TLSTTPVDTSTPVTTSTEAH--SSPTTSEGTSMPTSTPSEGSTPLTYMPVSTMLVVSSED 3181
Query: 1694 AQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAG 1732
+ + A+ +T V S + SS ++ + S G
Sbjct: 3182 STLSATPVDTSTPVTTSTEATSSTTAEGTSIPTSTPSEG 3220
Score = 40.4 bits (93), Expect = 0.016
Identities = 105/479 (21%), Positives = 154/479 (32%), Gaps = 69/479 (14%)
Query: 1243 SSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGN---- 1298
S+PSE S TS V TP+ S S T + S S + +P + G
Sbjct: 799 STPSEGSPLLTSIPVSITPVTSPEASTLSTTPVDS-NSPVTTSTEVSSSPTPAEGTSMPT 857
Query: 1299 ---REGN------EVAQKFSVIRPQTPPPQTPSSCLTPV--------SPGTSDGRRQGHR 1341
EG V+ + TP TPV SP TS+G
Sbjct: 858 STYSEGRTPLTSMPVSTTLVATSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSM--- 914
Query: 1342 SPSRPHPGGHPHSS-PLAPHP-ISGDRAHFSRRFLKHSPP---------------GPSFL 1384
S P G P +S P + P +S + S + S P G S
Sbjct: 915 PTSTPGEGSTPLTSMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIP 974
Query: 1385 NQTPA-GEVVEVGDSDDEQEVASHQAN--RSPPLDSDPPIPIDDCCWHMEPLSPIP-IDH 1440
TP+ G VA+ +A+ + P+DS+ P+ E SP P +
Sbjct: 975 TSTPSEGTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTS-----TEASSPPPTAEG 1029
Query: 1441 WNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGN 1500
++ + P S+P RM + L TTP S Q SS + G
Sbjct: 1030 TSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLSTTPADTSTPVTTYSQASSSSTTADGT 1089
Query: 1501 SRPSFLNS-----------ALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGLETPKGAN 1549
S P+ S + V E TP +P + T +G +
Sbjct: 1090 SMPTSTYSEGSTPLTSVPVSTRLVVSSEASTLSTTPVDTSIPVTTSTEASSSPTTAEGTS 1149
Query: 1550 RKKNLPPKVPITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQ--YTHQTLD 1607
+ PP TP+ + T V+ E + P+ + V E T +
Sbjct: 1150 IPTS-PPSEGTTPLASMPVSTTLVVSSEANTLSTTPVDSKTQVATSTEASSPPPTAEVTS 1208
Query: 1608 SDSEDESQSSQPLLQAP--HCQTLASQTYKPSRAGVHAQQEATTGPGAHRPKGPAKTKG 1664
+ + S PL P H +S+ S + V TT A P +G
Sbjct: 1209 MPTSTPGERSTPLTSMPVRHTPVASSEASTLSTSPVDTSTPVTT--SAETSSSPTTAEG 1265
Score = 38.1 bits (87), Expect = 0.079
Identities = 112/519 (21%), Positives = 159/519 (30%), Gaps = 91/519 (17%)
Query: 1243 SSPSEASTTDTSWLVPATPLASRSR--------DCSSQTQISSLRSGLAVQAVTQHTPRA 1294
S+PSE S + T V PL S D S+ S+ S + P++
Sbjct: 150 STPSEESISSTMAFVSTAPLPSFEAYTSLTYKVDMSTPLTTSTQASSSPTTPESTTIPKS 209
Query: 1295 SVGNREGNEVAQKFSVIRPQTPPPQ------TPSSCLTPV--------SPGTSDGRRQGH 1340
+ N EG+ + + TP TPV SP T++G +
Sbjct: 210 T--NSEGSTPLTSMPASTMKVASSEAITLLTTPVEISTPVTISAQASSSPTTAEGPSLSN 267
Query: 1341 RSPSRPHPGGHPHSSPLAPHPISGDRAHFSRRFLKHSPPGPSFLNQTPAGEVVEVGDSDD 1400
+PS GG S+PL P+S S S L+ TPA + V
Sbjct: 268 SAPS----GG---STPLTRMPLSVMLVVSSEA---------STLSTTPAATNIPV----- 306
Query: 1401 EQEVASHQANRSPPLDSDPPIPIDDCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNE 1460
+ S +A+ SP IP PL+ P T P++TS S
Sbjct: 307 ---ITSTEASSSPTTAEGTSIPTSTYTEGSTPLTSTPAS------TMPVATSEMSTLSIT 357
Query: 1461 AADSRDC----RSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFLNSALWDVWDG 1516
D+ P L TT S T S G+ L N S + A
Sbjct: 358 PVDTSTLVTTSTEPSSLPTTAEATSMLTSTL----SEGSTPLTNMPVSTILVA------S 407
Query: 1517 EEQRPPETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPITPMPQYSIMETPVLKK 1576
E T P A + T P TP+ + TPV
Sbjct: 408 SEASTTSTIPVDSKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVASS 467
Query: 1577 ELDRFGVRPLPKRQMVLKLKEIFQY--THQTLDSDSEDESQSSQPLL------------Q 1622
E P+ + V E T + + S+ S PL +
Sbjct: 468 EASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSE 527
Query: 1623 APHCQTLASQTYKPSRAGVHAQQEATTGPGAHRPKG-PAKTKGPRHQRKHHESITPPSRS 1681
A T T P A +TT G P P++ P + S +
Sbjct: 528 ASTLSTTPVDTSTPVTTSSEASSSSTTPEGTSIPTSTPSEGSTPLTNMPVSTRLVVSSEA 587
Query: 1682 PTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSS 1720
T P S V TS + S SS +++ +S
Sbjct: 588 STTSTTPA--------DSNTFVTTSSEASSSSTTAEGTS 618
Score = 37.7 bits (86), Expect = 0.10
Identities = 108/524 (20%), Positives = 159/524 (30%), Gaps = 90/524 (17%)
Query: 1243 SSPSEASTTDTSWLVPATPLASRSRDCSSQTQISS---------------LRSGLAVQAV 1287
S+PSE S TS + TP+AS S T + S G ++Q
Sbjct: 2095 SAPSEGSPLLTSIPLSTTPVASPEASTLSTTPVDSNSPVITSTEVSSSPIPTEGTSMQTS 2154
Query: 1288 TQHTPRASVGNREGNEVAQKFSVIRPQTPPPQTPSSCLT-----PVSPGTSDGRRQGHRS 1342
T R + + + S I + P S+ +T SP TS+G +
Sbjct: 2155 TYSDRRTPLTSMPVSTTVVASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTST 2214
Query: 1343 PSRPHPGGHPHSS-PLAPHPISGDRAHFSRRFLKHSPPGPSFLNQTPAGEVVEVGDSDDE 1401
PS G P +S P++ P+ A S L+ TP V
Sbjct: 2215 PSE---GSTPFTSMPVSTMPVVTSEA--------------STLSATPVDTSTPV------ 2251
Query: 1402 QEVASHQANRSPPLDSDPPIPIDDCCWHMEPLSPIPIDHW---NLE----RTGPLSTSSP 1454
S +A SP IP PL+ IP+ H N E T P+ +++P
Sbjct: 2252 --TTSTEATSSPTTAEGTSIPTSTLSEGTTPLTSIPVSHTLVANSEVSTLSTTPVDSNTP 2309
Query: 1455 SRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFLNSALWDVW 1514
EA+ + T+ T ++ ++ S S S
Sbjct: 2310 FTTSTEASSPPPTAEGTSMPTSTSSEGNTPLTRMPVSTTMVASFETSTLS---------- 2359
Query: 1515 DGEEQRPPETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKVPITPMPQYSIMETPVL 1574
P +T P S G+ +T + P+T +P + PV+
Sbjct: 2360 ----TTPADTSTPVTTYSQAGSSPTTADDTSMPTSTYSE--GSTPLTSVP---VSTMPVV 2410
Query: 1575 KKELDRFGVRPLPKRQMVLKLKEIFQ--YTHQTLDSDSEDESQSSQPLLQAP-------- 1624
E P+ V E T + + S+ + PL P
Sbjct: 2411 SSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTPVVS 2470
Query: 1625 ----HCQTLASQTYKPSRAGVHAQQEATTGPGAHRPKGPAKTKGPRHQRKHHESITP--- 1677
T T P A TT P A ++G S TP
Sbjct: 2471 SEAGTLSTTPVDTSTPMTTSTEASSSPTTAEDIVVPISTA-SEGSTLLTSIPVSTTPVAS 2529
Query: 1678 PSRSPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSS 1721
P S P N S ATS +G+ S+ S S
Sbjct: 2530 PEASTLSTTPVDSNSPVVTSTEISSSATSAEGTSMPTSTYSEGS 2573
Score = 37.4 bits (85), Expect = 0.14
Identities = 99/526 (18%), Positives = 176/526 (33%), Gaps = 67/526 (12%)
Query: 1246 SEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNREGNEVA 1305
SEAST T+ + +TP+ + + SS T + + TP S+ + +
Sbjct: 703 SEASTLSTTPVDTSTPVTTSTEASSSPTTADGASMPTSTPS-EGSTPLTSMPVSKTLLTS 761
Query: 1306 QKFSVIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHP--HSSPLAPHPIS 1363
+ S + T P T + T S +G P G P S P++ P++
Sbjct: 762 SEASTL--STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSITPVT 819
Query: 1364 GDRAHFSRRFLKHSPPGPSFLNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSDPPIPI 1423
P S L+ TP + S + + SP +P
Sbjct: 820 S--------------PEASTLSTTPV--------DSNSPVTTSTEVSSSPTPAEGTSMPT 857
Query: 1424 DDCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSCT 1483
PL+ +P+ T ++TS+ S D+ S + ++T R S T
Sbjct: 858 STYSEGRTPLTSMPVS------TTLVATSAISTLSTTPVDT----STPVTNSTEARSSPT 907
Query: 1484 TQRKLQEKSSGAGSLGNSRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGLE 1543
T +S G G++ + + + V E + TP P +
Sbjct: 908 TSEGTSMPTSTPGE-GSTPLTSMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPT 966
Query: 1544 TPKGANRKKNLPPKVPITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQ--Y 1601
T +G + + P + TP+ + T V E P+ + E
Sbjct: 967 TAEGTSIPTSTPSE-GTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTSTEASSPPP 1025
Query: 1602 THQTLDSDSEDESQSSQPLLQAPHCQTLA------------SQTYKPSRAGVHAQQEATT 1649
T + + S+ S PL + P T+ + T P A +TT
Sbjct: 1026 TAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLSTTPADTSTPVTTYSQASSSSTT 1085
Query: 1650 GPGAHRPKGPAKTKGPRHQRKHHESITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDG 1709
G P + E TP + P ++ + + S V TS+
Sbjct: 1086 ADGTSMPTS-----------TYSEGSTPLTSVPVSTRLVVSSEASTL--STTPVDTSIPV 1132
Query: 1710 SDSSLSSQSSSSCEFGAAFESAGEEEGEGEVSASQAAVQAADTDEA 1755
+ S+ +S S ++ E G + ++ EG +++ + + EA
Sbjct: 1133 TTSTEASSSPTTAE-GTSIPTSPPSEGTTPLASMPVSTTLVVSSEA 1177
Score = 34.3 bits (77), Expect = 1.1
Identities = 101/516 (19%), Positives = 158/516 (30%), Gaps = 82/516 (15%)
Query: 1243 SSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNREGN 1302
S+PSE +T TS V TP+ S S T + + G T +S EG
Sbjct: 1389 SNPSEGTTPLTSIPVSTTPVVSSEASTLSATPVDTSTPG-----TTSAEATSSPTTAEGI 1443
Query: 1303 EVAQKFSVIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPI 1362
+ P TPS TP+ P P + +S L+ P+
Sbjct: 1444 SI------------PTSTPSEGKTPLK-----------SIPVSNTPVANSEASTLSTTPV 1480
Query: 1363 SGDRAHFSRRFLKHSP---PGPSFLNQTPA-GEVVEVGDSDDEQEVASHQANRSPPLDSD 1418
+ + + SP G S TP+ G VAS + N +
Sbjct: 1481 DSNSPVVTSTAVSSSPTPAEGTSIAISTPSEGSTALTSIPVSTTTVASSEINSLSTTPAV 1540
Query: 1419 PPIPIDDCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPI 1478
P+ + SP D +++ + S+P + + L TTPI
Sbjct: 1541 TSTPV--TTYSQASSSPTTADGTSMQTSTYSEGSTPLTSLPVSTMLVVSSEANTLSTTPI 1598
Query: 1479 RGSCTTQRKLQEKSS---GAGSLGNSRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGG 1535
+ SS S+ S PS + L + P T P A ++
Sbjct: 1599 DSKTQVTASTEASSSTTAEGSSMTISTPSEGSPLLTSI-------PVSTTPVASPEASTL 1651
Query: 1536 AQKPEGLETPKGANRKKNLPP------KVPI-------TPMPQYSIMETPVLKKELDRFG 1582
+ P +P + + + P +P TP+ ++ TPV +
Sbjct: 1652 STTPVDSNSPVITSTEVSSSPTPAEGTSMPTSTYTEGRTPLTSITVRTTPVASSAISTLS 1711
Query: 1583 VRPLPKRQMVLKLKEI--FQYTHQTLDSDSEDESQSSQPLLQAP---------HCQTLAS 1631
P+ V E T + + S+ + PL P TL++
Sbjct: 1712 TTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSIPVSTTPVLSSEASTLSA 1771
Query: 1632 ---QTYKPSRAGVHAQQEATTGPGAHRPKG-------PAKTKGPRHQRKHHESITPPSRS 1681
T P A TT G P P + H + + S +
Sbjct: 1772 TPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPVSHTLVANSEASTLSTT 1831
Query: 1682 PTKEAPPGLNDDA----QIPASQESVATSVDGSDSS 1713
P P + A PA S+ATS S+
Sbjct: 1832 PVDSNSPVVTSTAVSSSPTPAEGTSIATSTPSEGST 1867
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 47.4 bits (111), Expect = 1e-04
Identities = 87/373 (23%), Positives = 137/373 (36%), Gaps = 57/373 (15%)
Query: 907 EPLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAE------APEQEAPEEALGHSSCSS 960
EPLEPG +T A+PP + S +E + E+E E+ S
Sbjct: 456 EPLEPGPLPVST--------AMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEES 507
Query: 961 PSRDCQAERKEGSLPHSDDA-GDYEQLFSSTQGEISEPSQITSEPEEQS--GAVRERGLE 1017
S D + ER + +EQL + +QG IS+P + + E++ A + RG
Sbjct: 508 ESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRA 567
Query: 1018 VSHR--LAPWQASPPHPCRFLLGPPQGG-----SPRGSHHTSGSSLSTPRSRGGTSQVGS 1070
+ P PP P + GG P G + GS P+ T+
Sbjct: 568 GADEDDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAPPAL 627
Query: 1071 PTLL-------SPAVPSKQKRDRSILTLSKEPGHQKGKERRSVLECRNKGVLMFPEKSPS 1123
PT S + +KR S L ++K PG + G+ V + + PS
Sbjct: 628 PTGYDSEEEEESRPMSYDEKRQLS-LDINKLPGEKLGRV-----------VHIIQAREPS 675
Query: 1124 IDLTQSNPD--HSSSRSQKSSSKLNEEDEVILLLDSDEELELEQTKMKSISSDPLEEKKA 1181
L SNP+ + K S+ E V+ L K + + L +K
Sbjct: 676 --LRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKK 733
Query: 1182 LEISPRSCELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPENRGSLGRRGAPWLFCDR 1241
E+ R + DV ++ PP+ E + + ++ R A D
Sbjct: 734 RELEKR------LQDVSGQLNSTKKPPKK----ANEKTESSSAQQVAVSRLSASSSSSDS 783
Query: 1242 ESSPSEASTTDTS 1254
SS S +S++DTS
Sbjct: 784 SSSSSSSSSSDTS 796
Score = 35.4 bits (80), Expect = 0.51
Identities = 50/232 (21%), Positives = 84/232 (36%), Gaps = 21/232 (9%)
Query: 24 PGIDPRSSEDQPE------SLKTGQMMDESDEDFKELCASFFQRVKKHGIKEVSGE---- 73
PG+ SSE E S + + DE DE+ +E +S + + H + E+ +
Sbjct: 471 PGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEESESSDSEEERAHRLAELQEQLRAV 530
Query: 74 RKTQKAASNGTQIRSKLKRTKQTATKTKTLQ-------GPAEKKPPSGSQAPRTKKQRVT 126
+ A S G + K KR K+ K + + + K P + P+ KK +
Sbjct: 531 HEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPPQPKKSK-- 588
Query: 127 KWQASEPAHSVNGEGGVLASAPDPPVLRETAQNTQTGNQQEPSPNLSREKTRENVPNSDS 186
K S + G G S L + A T+T P+ S E+ + D
Sbjct: 589 KASGSGGGSAALGPSGFGPSGGSGTKLPKKA--TKTAPPALPTGYDSEEEEESRPMSYDE 646
Query: 187 QPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPERLRHASEECSLEAARE 238
+ S +P R ++ R + ++PE + E RE
Sbjct: 647 KRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRE 698
Score = 33.5 bits (75), Expect = 2.0
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Query: 1666 RHQRKHHESITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFG 1725
R+ + E + P + PPGL + +S+ES SS+SSS E
Sbjct: 449 RYAKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEES------------SSESSSEEEEE 496
Query: 1726 AAFESAGEEEGEGEVSASQAAVQAADTDEALRCYIRSKPALYQ 1768
E EEE E S + A + A+ E LR AL Q
Sbjct: 497 EDEEDEEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQ 539
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 47.4 bits (111), Expect = 1e-04
Identities = 87/373 (23%), Positives = 137/373 (36%), Gaps = 57/373 (15%)
Query: 907 EPLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAE------APEQEAPEEALGHSSCSS 960
EPLEPG +T A+PP + S +E + E+E E+ S
Sbjct: 456 EPLEPGPLPVST--------AMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEES 507
Query: 961 PSRDCQAERKEGSLPHSDDA-GDYEQLFSSTQGEISEPSQITSEPEEQS--GAVRERGLE 1017
S D + ER + +EQL + +QG IS+P + + E++ A + RG
Sbjct: 508 ESSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRA 567
Query: 1018 VSHR--LAPWQASPPHPCRFLLGPPQGG-----SPRGSHHTSGSSLSTPRSRGGTSQVGS 1070
+ P PP P + GG P G + GS P+ T+
Sbjct: 568 GADEDDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAPPAL 627
Query: 1071 PTLL-------SPAVPSKQKRDRSILTLSKEPGHQKGKERRSVLECRNKGVLMFPEKSPS 1123
PT S + +KR S L ++K PG + G+ V + + PS
Sbjct: 628 PTGYDSEEEEESRPMSYDEKRQLS-LDINKLPGEKLGRV-----------VHIIQAREPS 675
Query: 1124 IDLTQSNPD--HSSSRSQKSSSKLNEEDEVILLLDSDEELELEQTKMKSISSDPLEEKKA 1181
L SNP+ + K S+ E V+ L K + + L +K
Sbjct: 676 --LRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKK 733
Query: 1182 LEISPRSCELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPENRGSLGRRGAPWLFCDR 1241
E+ R + DV ++ PP+ E + + ++ R A D
Sbjct: 734 RELEKR------LQDVSGQLNSTKKPPKK----ANEKTESSSAQQVAVSRLSASSSSSDS 783
Query: 1242 ESSPSEASTTDTS 1254
SS S +S++DTS
Sbjct: 784 SSSSSSSSSSDTS 796
Score = 35.4 bits (80), Expect = 0.51
Identities = 50/232 (21%), Positives = 84/232 (36%), Gaps = 21/232 (9%)
Query: 24 PGIDPRSSEDQPE------SLKTGQMMDESDEDFKELCASFFQRVKKHGIKEVSGE---- 73
PG+ SSE E S + + DE DE+ +E +S + + H + E+ +
Sbjct: 471 PGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEESESSDSEEERAHRLAELQEQLRAV 530
Query: 74 RKTQKAASNGTQIRSKLKRTKQTATKTKTLQ-------GPAEKKPPSGSQAPRTKKQRVT 126
+ A S G + K KR K+ K + + + K P + P+ KK +
Sbjct: 531 HEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPRPPQPKKSK-- 588
Query: 127 KWQASEPAHSVNGEGGVLASAPDPPVLRETAQNTQTGNQQEPSPNLSREKTRENVPNSDS 186
K S + G G S L + A T+T P+ S E+ + D
Sbjct: 589 KASGSGGGSAALGPSGFGPSGGSGTKLPKKA--TKTAPPALPTGYDSEEEEESRPMSYDE 646
Query: 187 QPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPERLRHASEECSLEAARE 238
+ S +P R ++ R + ++PE + E RE
Sbjct: 647 KRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRE 698
Score = 33.5 bits (75), Expect = 2.0
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Query: 1666 RHQRKHHESITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFG 1725
R+ + E + P + PPGL + +S+ES SS+SSS E
Sbjct: 449 RYAKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEES------------SSESSSEEEEE 496
Query: 1726 AAFESAGEEEGEGEVSASQAAVQAADTDEALRCYIRSKPALYQ 1768
E EEE E S + A + A+ E LR AL Q
Sbjct: 497 EDEEDEEEEESESSDSEEERAHRLAELQEQLRAVHEQLAALSQ 539
>gi|46370071 GRB2-associated binding protein 1 isoform a [Homo
sapiens]
Length = 724
Score = 46.6 bits (109), Expect = 2e-04
Identities = 52/211 (24%), Positives = 80/211 (37%), Gaps = 37/211 (17%)
Query: 1243 SSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRA-------- 1294
S P AS TD+S+ +P ++ + S ++ LR + Q PRA
Sbjct: 361 SIPRTASDTDSSYCIPTAGMSPSRSNTISTVDLNKLRKDASSQDCYD-IPRAFPSDRSSS 419
Query: 1295 --------------SVGNREGNEVAQKFSVIRPQTPPPQTPSSCLTPV--------SPGT 1332
+VG+ E+ + + + P +PP Q SS P+ +PGT
Sbjct: 420 LEGFHNHFKVKNVLTVGSVSSEELDENYVPMNPNSPPRQHSSSFTEPIQEANYVPMTPGT 479
Query: 1333 SDGRRQGHRSPSRPHPG--GHPHSSPLAPHPISGDRAHFSRRFLKHSPPG--PSFLNQTP 1388
D G + P H G P + P P P++ R LK G P L P
Sbjct: 480 FDFSSFGMQVPPPAHMGFRSSPKTPPRRPVPVADCEPPPVDRNLKPDRKGQSPKILRLKP 539
Query: 1389 AGEVVEVGDSDDEQEVASHQANRSPPLDSDP 1419
G +E DS + A+ + + PL+ P
Sbjct: 540 HG--LERTDSQTIGDFATRRKVKPAPLEIKP 568
>gi|4557445 regulator of chromosome condensation and BTB domain
containing protein 2 [Homo sapiens]
Length = 551
Score = 46.2 bits (108), Expect = 3e-04
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 686 NNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQYVNNEGF-SAVEDGVLTQRVLLGDVS 744
+NP +D++F D G+ +YAHK +L RC E F S++ED V + + S
Sbjct: 389 DNPDTADLKFLVD-GKYIYAHKVLLKIRC---------EHFRSSLEDNE-DDIVEMSEFS 437
Query: 745 TEAARTFLHYLYTADTGLPPGLSSELSSLAHRFGVSELVHLCEQ 788
R FL YLYT L P + L LA + + L LC+Q
Sbjct: 438 YPVYRAFLEYLYTDSISLSPEEAVGLLDLATFYRENRLKKLCQQ 481
>gi|211904190 hypothetical protein LOC149478 [Homo sapiens]
Length = 291
Score = 45.1 bits (105), Expect = 6e-04
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 683 AMVNNPHLSDVQFQT-DSGEVLYAHKFVLYARCPLLIQYVNNEGFSAVEDGVLTQRVLLG 741
++VNNP SDV F + ++AH+ +L RC + + E V V+ L
Sbjct: 21 SLVNNPRYSDVCFVVGQERQEVFAHRCLLACRCNFFQRLLGTEPGPGVPSPVV-----LS 75
Query: 742 DVSTEAARTFLHYLYTADTGLPPGLSSELSSLAHRFGVSELVHLCEQ 788
V TEA L +LYT L E+ + A +G+ EL LC Q
Sbjct: 76 TVPTEAFLAVLEFLYTNSVKLYRHSVLEVLTAAVEYGLEELRELCLQ 122
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 44.7 bits (104), Expect = 8e-04
Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 25/167 (14%)
Query: 91 KRTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDP 150
K T TK + P E P + AP T K EPA + P P
Sbjct: 370 KEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTK---------EPAPTTTKSAPTTPKEPSP 420
Query: 151 PVLRETAQNTQTGNQQEPSPNLSREKT----RENVPNSDSQPPPSCLTTAVPSPSKPR-- 204
+E A T +EP+P ++ +E P + +P P+ TT P+P+ P+
Sbjct: 421 TTTKEPAPTT----PKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT--TTKKPAPTTPKEP 474
Query: 205 ----TAQLVLQRMQQFKRADPERLRHASEECSLEAAREENVPKDPQE 247
+ ++ PE+L + E EE P P+E
Sbjct: 475 APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEE 521
Score = 36.2 bits (82), Expect = 0.30
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
Query: 91 KRTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDP 150
K T K T P E P + AP T K+ +PA + E P P
Sbjct: 315 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPT-APKKPAPTTPKE-------PAP 366
Query: 151 PVLRETAQNTQTGNQQEPSPNLSRE---KTRENVPNSDSQPPPSCLTTAVPSPSKP 203
+E A T +EPSP +E T ++ P + +P P+ +A +P +P
Sbjct: 367 TTPKEPAPTT----TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 418
Score = 35.4 bits (80), Expect = 0.51
Identities = 143/784 (18%), Positives = 243/784 (30%), Gaps = 125/784 (15%)
Query: 996 EPSQITSEPEEQSGAVRERGLEVSHRLAPWQASPPHPCRFLLGPPQGGSPRGSHHTSGS- 1054
EP+ T P+E + + + + AP +P P P +P+ T+
Sbjct: 269 EPAPTT--PKEPAPTTTKEPAPTTTKSAP--TTPKEPAPTTPKKPAPTTPKEPAPTTPKE 324
Query: 1055 -SLSTPRSRGGTSQVGSPTLLSPAVPSKQKRDRSILTLSKEPGHQKGKERRSVLECRNKG 1113
+ +TP+ T++ +PT P+ K+ T KEP KE
Sbjct: 325 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP--TTPKEPAPTTPKEPAPTTT----- 377
Query: 1114 VLMFPEKSPSIDLTQSNPDHSSSRSQKSSSKLNEEDEVILLLDSDEELELEQTKMKSISS 1173
E SP+ T P ++++S +++K E T KS +
Sbjct: 378 ----KEPSPT---TPKEPAPTTTKSAPTTTK-----------------EPAPTTTKSAPT 413
Query: 1174 DPLEEKKALEISPRSCELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPENRGSLGRRG 1233
P E P +EP+ + P+ A ++ +
Sbjct: 414 TPKEPSPTTTKEPAPT---------TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTK 464
Query: 1234 APWLFCDRE---SSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQH 1290
P +E ++P E + T L P TP + + + + LA +
Sbjct: 465 KPAPTTPKEPAPTTPKETAPTTPKKLTPTTP--EKLAPTTPEKPAPTTPEELAPTTPEEP 522
Query: 1291 TPRASVGNREGNEVAQKFSVIRPQTPPPQTPSSCL--TPVSPGTSDGRRQGHRSPSRPHP 1348
TP P+ P P TP + TP P + + +P P P
Sbjct: 523 TPTT------------------PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 564
Query: 1349 GGHPHSSPLAPHPISGDRAHFSRRFLKHSP--PGPSFLNQTPAGEVVEVGDSDDEQEVAS 1406
++P P G + +P P P L T E
Sbjct: 565 TTPKETAPTTP---KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPK 621
Query: 1407 HQANRSP-------PLDSDPPIPIDDCCWHME------PLSPIPIDHWNLERTGPLSTSS 1453
A +P P + P P ++ P P P + GP ST+S
Sbjct: 622 GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTS 681
Query: 1454 ------------PSRRMNEAADSRDCRSPGLLDTTPIRGS-CTTQRKLQEKSSGAGSLGN 1500
P+ A + +P +T P S +T +E ++ S
Sbjct: 682 DKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDE 741
Query: 1501 SRPSFLNSALWDVWDGEEQRP--PETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKV 1558
S P + + P P T PA A KPE T K +++L
Sbjct: 742 STPELSAEPTPKALENSPKEPGVPTTKTPA-------ATKPEMTTTAKDKTTERDLRTTP 794
Query: 1559 PITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDS-EDESQSS 1617
T ET ++ + + ++ + TL + + + ++
Sbjct: 795 ETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTT 854
Query: 1618 QPLLQAPHCQTLASQTYKPSRAGVHAQQEATTGPGAHRP----KGPAKTKGPRHQRKHHE 1673
+ + +T KP +++ T P +P K P TK P+ + +
Sbjct: 855 KKTITTTEIMNKPEETAKPKDRATNSK---ATTPKPQKPTKAPKKPTSTKKPKTMPRVRK 911
Query: 1674 SITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAGE 1733
T P+ P LN ++I + T + + +S E E AG
Sbjct: 912 PKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPN------QTPNSKLVEVNPKSEDAGG 965
Query: 1734 EEGE 1737
EGE
Sbjct: 966 AEGE 969
Score = 35.0 bits (79), Expect = 0.67
Identities = 96/510 (18%), Positives = 169/510 (33%), Gaps = 98/510 (19%)
Query: 93 TKQTATKTKTLQGPAE---KKPPSGSQAPRTKKQRVTKWQASEPAHSV-NGEGGVLASAP 148
T T TL+ PA KKP AP T K+ T +PA + G P
Sbjct: 573 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKE-PTSTTCDKPAPTTPKGTAPTTPKEP 631
Query: 149 DPPVLRETAQNTQTGNQ----QEPSPNLSREKT-------------------------RE 179
P +E A T G +EP+P ++ +E
Sbjct: 632 APTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKE 691
Query: 180 NVPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQ-QFKRADPERLRHASEECSLEAARE 238
P + +P P+ T P+P+ P T + +P + + +E + E + E
Sbjct: 692 TAPTTPKEPAPT--TPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAE 749
Query: 239 ------ENVPKDPQEEMMAGNVYGLGPPAPESDAAVALTLQQEFARVGASAHDDSLEEKG 292
EN PK+P G P ++ AA + +A D + E
Sbjct: 750 PTPKALENSPKEP------------GVPTTKTPAATK-------PEMTTTAKDKTTERD- 789
Query: 293 LFFCQICQKNLSAMNVTRREQHVNRCLDEAEKTLRPS-VPQIPECPICGKPFLTLKSRTS 351
+ +A +T+ E++ T + V TLK+ T
Sbjct: 790 --LRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTL 847
Query: 352 HLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSPPMFSFSDHSRGLKR-RGPTSKKEPRKR 410
K K + ++ +TA+P+ ++ + + K + PTS K+P+
Sbjct: 848 APKVTTTKKTITTTEIMNKPE-ETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTM 906
Query: 411 RKVDEAPSEDLLVAMALSRSEMEPGAAVPALRLESAFSERIRP----------------- 453
+V + + M + E+ P + + L++ P
Sbjct: 907 PRVRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGA 966
Query: 454 EAENKSRKKKPPVSPPLLLVQDSETTGRQIEDRVAL--LLSEEVELSSTPPLPASRILKE 511
E E +P V P + D + R + + +LS+E + + P+ L+
Sbjct: 967 EGETPHMLLRPHVFMP-EVTPDMDYLPRVPNQGIIINPMLSDETNICNGKPVDGLTTLRN 1025
Query: 512 G----------WERAGQCPPPPERKQSFLW 531
G W + PP P R+ + +W
Sbjct: 1026 GTLVAFRGHYFWMLSPFSPPSPARRITEVW 1055
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 44.7 bits (104), Expect = 8e-04
Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 25/167 (14%)
Query: 91 KRTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDP 150
K T TK + P E P + AP T K EPA + P P
Sbjct: 411 KEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTK---------EPAPTTTKSAPTTPKEPSP 461
Query: 151 PVLRETAQNTQTGNQQEPSPNLSREKT----RENVPNSDSQPPPSCLTTAVPSPSKPR-- 204
+E A T +EP+P ++ +E P + +P P+ TT P+P+ P+
Sbjct: 462 TTTKEPAPTT----PKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT--TTKKPAPTTPKEP 515
Query: 205 ----TAQLVLQRMQQFKRADPERLRHASEECSLEAAREENVPKDPQE 247
+ ++ PE+L + E EE P P+E
Sbjct: 516 APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEE 562
Score = 36.2 bits (82), Expect = 0.30
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
Query: 91 KRTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDP 150
K T K T P E P + AP T K+ +PA + E P P
Sbjct: 356 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPT-APKKPAPTTPKE-------PAP 407
Query: 151 PVLRETAQNTQTGNQQEPSPNLSRE---KTRENVPNSDSQPPPSCLTTAVPSPSKP 203
+E A T +EPSP +E T ++ P + +P P+ +A +P +P
Sbjct: 408 TTPKEPAPTT----TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 459
Score = 35.4 bits (80), Expect = 0.51
Identities = 143/784 (18%), Positives = 243/784 (30%), Gaps = 125/784 (15%)
Query: 996 EPSQITSEPEEQSGAVRERGLEVSHRLAPWQASPPHPCRFLLGPPQGGSPRGSHHTSGS- 1054
EP+ T P+E + + + + AP +P P P +P+ T+
Sbjct: 310 EPAPTT--PKEPAPTTTKEPAPTTTKSAP--TTPKEPAPTTPKKPAPTTPKEPAPTTPKE 365
Query: 1055 -SLSTPRSRGGTSQVGSPTLLSPAVPSKQKRDRSILTLSKEPGHQKGKERRSVLECRNKG 1113
+ +TP+ T++ +PT P+ K+ T KEP KE
Sbjct: 366 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP--TTPKEPAPTTPKEPAPTTT----- 418
Query: 1114 VLMFPEKSPSIDLTQSNPDHSSSRSQKSSSKLNEEDEVILLLDSDEELELEQTKMKSISS 1173
E SP+ T P ++++S +++K E T KS +
Sbjct: 419 ----KEPSPT---TPKEPAPTTTKSAPTTTK-----------------EPAPTTTKSAPT 454
Query: 1174 DPLEEKKALEISPRSCELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPENRGSLGRRG 1233
P E P +EP+ + P+ A ++ +
Sbjct: 455 TPKEPSPTTTKEPAPT---------TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTK 505
Query: 1234 APWLFCDRE---SSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQH 1290
P +E ++P E + T L P TP + + + + LA +
Sbjct: 506 KPAPTTPKEPAPTTPKETAPTTPKKLTPTTP--EKLAPTTPEKPAPTTPEELAPTTPEEP 563
Query: 1291 TPRASVGNREGNEVAQKFSVIRPQTPPPQTPSSCL--TPVSPGTSDGRRQGHRSPSRPHP 1348
TP P+ P P TP + TP P + + +P P P
Sbjct: 564 TPTT------------------PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 605
Query: 1349 GGHPHSSPLAPHPISGDRAHFSRRFLKHSP--PGPSFLNQTPAGEVVEVGDSDDEQEVAS 1406
++P P G + +P P P L T E
Sbjct: 606 TTPKETAPTTP---KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPK 662
Query: 1407 HQANRSP-------PLDSDPPIPIDDCCWHME------PLSPIPIDHWNLERTGPLSTSS 1453
A +P P + P P ++ P P P + GP ST+S
Sbjct: 663 GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTS 722
Query: 1454 ------------PSRRMNEAADSRDCRSPGLLDTTPIRGS-CTTQRKLQEKSSGAGSLGN 1500
P+ A + +P +T P S +T +E ++ S
Sbjct: 723 DKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDE 782
Query: 1501 SRPSFLNSALWDVWDGEEQRP--PETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKV 1558
S P + + P P T PA A KPE T K +++L
Sbjct: 783 STPELSAEPTPKALENSPKEPGVPTTKTPA-------ATKPEMTTTAKDKTTERDLRTTP 835
Query: 1559 PITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDS-EDESQSS 1617
T ET ++ + + ++ + TL + + + ++
Sbjct: 836 ETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTT 895
Query: 1618 QPLLQAPHCQTLASQTYKPSRAGVHAQQEATTGPGAHRP----KGPAKTKGPRHQRKHHE 1673
+ + +T KP +++ T P +P K P TK P+ + +
Sbjct: 896 KKTITTTEIMNKPEETAKPKDRATNSK---ATTPKPQKPTKAPKKPTSTKKPKTMPRVRK 952
Query: 1674 SITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAGE 1733
T P+ P LN ++I + T + + +S E E AG
Sbjct: 953 PKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPN------QTPNSKLVEVNPKSEDAGG 1006
Query: 1734 EEGE 1737
EGE
Sbjct: 1007 AEGE 1010
Score = 35.0 bits (79), Expect = 0.67
Identities = 96/510 (18%), Positives = 169/510 (33%), Gaps = 98/510 (19%)
Query: 93 TKQTATKTKTLQGPAE---KKPPSGSQAPRTKKQRVTKWQASEPAHSV-NGEGGVLASAP 148
T T TL+ PA KKP AP T K+ T +PA + G P
Sbjct: 614 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKE-PTSTTCDKPAPTTPKGTAPTTPKEP 672
Query: 149 DPPVLRETAQNTQTGNQ----QEPSPNLSREKT-------------------------RE 179
P +E A T G +EP+P ++ +E
Sbjct: 673 APTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKE 732
Query: 180 NVPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQ-QFKRADPERLRHASEECSLEAARE 238
P + +P P+ T P+P+ P T + +P + + +E + E + E
Sbjct: 733 TAPTTPKEPAPT--TPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAE 790
Query: 239 ------ENVPKDPQEEMMAGNVYGLGPPAPESDAAVALTLQQEFARVGASAHDDSLEEKG 292
EN PK+P G P ++ AA + +A D + E
Sbjct: 791 PTPKALENSPKEP------------GVPTTKTPAATK-------PEMTTTAKDKTTERD- 830
Query: 293 LFFCQICQKNLSAMNVTRREQHVNRCLDEAEKTLRPS-VPQIPECPICGKPFLTLKSRTS 351
+ +A +T+ E++ T + V TLK+ T
Sbjct: 831 --LRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTL 888
Query: 352 HLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSPPMFSFSDHSRGLKR-RGPTSKKEPRKR 410
K K + ++ +TA+P+ ++ + + K + PTS K+P+
Sbjct: 889 APKVTTTKKTITTTEIMNKPE-ETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTM 947
Query: 411 RKVDEAPSEDLLVAMALSRSEMEPGAAVPALRLESAFSERIRP----------------- 453
+V + + M + E+ P + + L++ P
Sbjct: 948 PRVRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGA 1007
Query: 454 EAENKSRKKKPPVSPPLLLVQDSETTGRQIEDRVAL--LLSEEVELSSTPPLPASRILKE 511
E E +P V P + D + R + + +LS+E + + P+ L+
Sbjct: 1008 EGETPHMLLRPHVFMP-EVTPDMDYLPRVPNQGIIINPMLSDETNICNGKPVDGLTTLRN 1066
Query: 512 G----------WERAGQCPPPPERKQSFLW 531
G W + PP P R+ + +W
Sbjct: 1067 GTLVAFRGHYFWMLSPFSPPSPARRITEVW 1096
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 44.7 bits (104), Expect = 8e-04
Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 25/167 (14%)
Query: 91 KRTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDP 150
K T TK + P E P + AP T K EPA + P P
Sbjct: 463 KEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTK---------EPAPTTTKSAPTTPKEPSP 513
Query: 151 PVLRETAQNTQTGNQQEPSPNLSREKT----RENVPNSDSQPPPSCLTTAVPSPSKPR-- 204
+E A T +EP+P ++ +E P + +P P+ TT P+P+ P+
Sbjct: 514 TTTKEPAPTT----PKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT--TTKKPAPTTPKEP 567
Query: 205 ----TAQLVLQRMQQFKRADPERLRHASEECSLEAAREENVPKDPQE 247
+ ++ PE+L + E EE P P+E
Sbjct: 568 APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEE 614
Score = 36.2 bits (82), Expect = 0.30
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
Query: 91 KRTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDP 150
K T K T P E P + AP T K+ +PA + E P P
Sbjct: 408 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPT-APKKPAPTTPKE-------PAP 459
Query: 151 PVLRETAQNTQTGNQQEPSPNLSRE---KTRENVPNSDSQPPPSCLTTAVPSPSKP 203
+E A T +EPSP +E T ++ P + +P P+ +A +P +P
Sbjct: 460 TTPKEPAPTT----TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 511
Score = 35.4 bits (80), Expect = 0.51
Identities = 143/784 (18%), Positives = 243/784 (30%), Gaps = 125/784 (15%)
Query: 996 EPSQITSEPEEQSGAVRERGLEVSHRLAPWQASPPHPCRFLLGPPQGGSPRGSHHTSGS- 1054
EP+ T P+E + + + + AP +P P P +P+ T+
Sbjct: 362 EPAPTT--PKEPAPTTTKEPAPTTTKSAP--TTPKEPAPTTPKKPAPTTPKEPAPTTPKE 417
Query: 1055 -SLSTPRSRGGTSQVGSPTLLSPAVPSKQKRDRSILTLSKEPGHQKGKERRSVLECRNKG 1113
+ +TP+ T++ +PT P+ K+ T KEP KE
Sbjct: 418 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP--TTPKEPAPTTPKEPAPTTT----- 470
Query: 1114 VLMFPEKSPSIDLTQSNPDHSSSRSQKSSSKLNEEDEVILLLDSDEELELEQTKMKSISS 1173
E SP+ T P ++++S +++K E T KS +
Sbjct: 471 ----KEPSPT---TPKEPAPTTTKSAPTTTK-----------------EPAPTTTKSAPT 506
Query: 1174 DPLEEKKALEISPRSCELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPENRGSLGRRG 1233
P E P +EP+ + P+ A ++ +
Sbjct: 507 TPKEPSPTTTKEPAPT---------TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTK 557
Query: 1234 APWLFCDRE---SSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQH 1290
P +E ++P E + T L P TP + + + + LA +
Sbjct: 558 KPAPTTPKEPAPTTPKETAPTTPKKLTPTTP--EKLAPTTPEKPAPTTPEELAPTTPEEP 615
Query: 1291 TPRASVGNREGNEVAQKFSVIRPQTPPPQTPSSCL--TPVSPGTSDGRRQGHRSPSRPHP 1348
TP P+ P P TP + TP P + + +P P P
Sbjct: 616 TPTT------------------PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 657
Query: 1349 GGHPHSSPLAPHPISGDRAHFSRRFLKHSP--PGPSFLNQTPAGEVVEVGDSDDEQEVAS 1406
++P P G + +P P P L T E
Sbjct: 658 TTPKETAPTTP---KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPK 714
Query: 1407 HQANRSP-------PLDSDPPIPIDDCCWHME------PLSPIPIDHWNLERTGPLSTSS 1453
A +P P + P P ++ P P P + GP ST+S
Sbjct: 715 GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTS 774
Query: 1454 ------------PSRRMNEAADSRDCRSPGLLDTTPIRGS-CTTQRKLQEKSSGAGSLGN 1500
P+ A + +P +T P S +T +E ++ S
Sbjct: 775 DKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDE 834
Query: 1501 SRPSFLNSALWDVWDGEEQRP--PETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKV 1558
S P + + P P T PA A KPE T K +++L
Sbjct: 835 STPELSAEPTPKALENSPKEPGVPTTKTPA-------ATKPEMTTTAKDKTTERDLRTTP 887
Query: 1559 PITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDS-EDESQSS 1617
T ET ++ + + ++ + TL + + + ++
Sbjct: 888 ETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTT 947
Query: 1618 QPLLQAPHCQTLASQTYKPSRAGVHAQQEATTGPGAHRP----KGPAKTKGPRHQRKHHE 1673
+ + +T KP +++ T P +P K P TK P+ + +
Sbjct: 948 KKTITTTEIMNKPEETAKPKDRATNSK---ATTPKPQKPTKAPKKPTSTKKPKTMPRVRK 1004
Query: 1674 SITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAGE 1733
T P+ P LN ++I + T + + +S E E AG
Sbjct: 1005 PKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPN------QTPNSKLVEVNPKSEDAGG 1058
Query: 1734 EEGE 1737
EGE
Sbjct: 1059 AEGE 1062
Score = 35.0 bits (79), Expect = 0.67
Identities = 96/510 (18%), Positives = 169/510 (33%), Gaps = 98/510 (19%)
Query: 93 TKQTATKTKTLQGPAE---KKPPSGSQAPRTKKQRVTKWQASEPAHSV-NGEGGVLASAP 148
T T TL+ PA KKP AP T K+ T +PA + G P
Sbjct: 666 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKE-PTSTTCDKPAPTTPKGTAPTTPKEP 724
Query: 149 DPPVLRETAQNTQTGNQ----QEPSPNLSREKT-------------------------RE 179
P +E A T G +EP+P ++ +E
Sbjct: 725 APTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKE 784
Query: 180 NVPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQ-QFKRADPERLRHASEECSLEAARE 238
P + +P P+ T P+P+ P T + +P + + +E + E + E
Sbjct: 785 TAPTTPKEPAPT--TPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAE 842
Query: 239 ------ENVPKDPQEEMMAGNVYGLGPPAPESDAAVALTLQQEFARVGASAHDDSLEEKG 292
EN PK+P G P ++ AA + +A D + E
Sbjct: 843 PTPKALENSPKEP------------GVPTTKTPAATK-------PEMTTTAKDKTTERD- 882
Query: 293 LFFCQICQKNLSAMNVTRREQHVNRCLDEAEKTLRPS-VPQIPECPICGKPFLTLKSRTS 351
+ +A +T+ E++ T + V TLK+ T
Sbjct: 883 --LRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTL 940
Query: 352 HLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSPPMFSFSDHSRGLKR-RGPTSKKEPRKR 410
K K + ++ +TA+P+ ++ + + K + PTS K+P+
Sbjct: 941 APKVTTTKKTITTTEIMNKPE-ETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTM 999
Query: 411 RKVDEAPSEDLLVAMALSRSEMEPGAAVPALRLESAFSERIRP----------------- 453
+V + + M + E+ P + + L++ P
Sbjct: 1000 PRVRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGA 1059
Query: 454 EAENKSRKKKPPVSPPLLLVQDSETTGRQIEDRVAL--LLSEEVELSSTPPLPASRILKE 511
E E +P V P + D + R + + +LS+E + + P+ L+
Sbjct: 1060 EGETPHMLLRPHVFMP-EVTPDMDYLPRVPNQGIIINPMLSDETNICNGKPVDGLTTLRN 1118
Query: 512 G----------WERAGQCPPPPERKQSFLW 531
G W + PP P R+ + +W
Sbjct: 1119 GTLVAFRGHYFWMLSPFSPPSPARRITEVW 1148
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 44.7 bits (104), Expect = 8e-04
Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 25/167 (14%)
Query: 91 KRTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDP 150
K T TK + P E P + AP T K EPA + P P
Sbjct: 504 KEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTK---------EPAPTTTKSAPTTPKEPSP 554
Query: 151 PVLRETAQNTQTGNQQEPSPNLSREKT----RENVPNSDSQPPPSCLTTAVPSPSKPR-- 204
+E A T +EP+P ++ +E P + +P P+ TT P+P+ P+
Sbjct: 555 TTTKEPAPTT----PKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT--TTKKPAPTTPKEP 608
Query: 205 ----TAQLVLQRMQQFKRADPERLRHASEECSLEAAREENVPKDPQE 247
+ ++ PE+L + E EE P P+E
Sbjct: 609 APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEE 655
Score = 36.2 bits (82), Expect = 0.30
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
Query: 91 KRTKQTATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDP 150
K T K T P E P + AP T K+ +PA + E P P
Sbjct: 449 KEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPT-APKKPAPTTPKE-------PAP 500
Query: 151 PVLRETAQNTQTGNQQEPSPNLSRE---KTRENVPNSDSQPPPSCLTTAVPSPSKP 203
+E A T +EPSP +E T ++ P + +P P+ +A +P +P
Sbjct: 501 TTPKEPAPTT----TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Score = 35.4 bits (80), Expect = 0.51
Identities = 143/784 (18%), Positives = 243/784 (30%), Gaps = 125/784 (15%)
Query: 996 EPSQITSEPEEQSGAVRERGLEVSHRLAPWQASPPHPCRFLLGPPQGGSPRGSHHTSGS- 1054
EP+ T P+E + + + + AP +P P P +P+ T+
Sbjct: 403 EPAPTT--PKEPAPTTTKEPAPTTTKSAP--TTPKEPAPTTPKKPAPTTPKEPAPTTPKE 458
Query: 1055 -SLSTPRSRGGTSQVGSPTLLSPAVPSKQKRDRSILTLSKEPGHQKGKERRSVLECRNKG 1113
+ +TP+ T++ +PT P+ K+ T KEP KE
Sbjct: 459 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP--TTPKEPAPTTPKEPAPTTT----- 511
Query: 1114 VLMFPEKSPSIDLTQSNPDHSSSRSQKSSSKLNEEDEVILLLDSDEELELEQTKMKSISS 1173
E SP+ T P ++++S +++K E T KS +
Sbjct: 512 ----KEPSPT---TPKEPAPTTTKSAPTTTK-----------------EPAPTTTKSAPT 547
Query: 1174 DPLEEKKALEISPRSCELFSIIDVDADQEPSQSPPRSEAVLQQEDEGALPENRGSLGRRG 1233
P E P +EP+ + P+ A ++ +
Sbjct: 548 TPKEPSPTTTKEPAPT---------TPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTK 598
Query: 1234 APWLFCDRE---SSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQH 1290
P +E ++P E + T L P TP + + + + LA +
Sbjct: 599 KPAPTTPKEPAPTTPKETAPTTPKKLTPTTP--EKLAPTTPEKPAPTTPEELAPTTPEEP 656
Query: 1291 TPRASVGNREGNEVAQKFSVIRPQTPPPQTPSSCL--TPVSPGTSDGRRQGHRSPSRPHP 1348
TP P+ P P TP + TP P + + +P P P
Sbjct: 657 TPTT------------------PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 698
Query: 1349 GGHPHSSPLAPHPISGDRAHFSRRFLKHSP--PGPSFLNQTPAGEVVEVGDSDDEQEVAS 1406
++P P G + +P P P L T E
Sbjct: 699 TTPKETAPTTP---KGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPK 755
Query: 1407 HQANRSP-------PLDSDPPIPIDDCCWHME------PLSPIPIDHWNLERTGPLSTSS 1453
A +P P + P P ++ P P P + GP ST+S
Sbjct: 756 GTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTS 815
Query: 1454 ------------PSRRMNEAADSRDCRSPGLLDTTPIRGS-CTTQRKLQEKSSGAGSLGN 1500
P+ A + +P +T P S +T +E ++ S
Sbjct: 816 DKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDE 875
Query: 1501 SRPSFLNSALWDVWDGEEQRP--PETPPPAQMPSAGGAQKPEGLETPKGANRKKNLPPKV 1558
S P + + P P T PA A KPE T K +++L
Sbjct: 876 STPELSAEPTPKALENSPKEPGVPTTKTPA-------ATKPEMTTTAKDKTTERDLRTTP 928
Query: 1559 PITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDS-EDESQSS 1617
T ET ++ + + ++ + TL + + + ++
Sbjct: 929 ETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTT 988
Query: 1618 QPLLQAPHCQTLASQTYKPSRAGVHAQQEATTGPGAHRP----KGPAKTKGPRHQRKHHE 1673
+ + +T KP +++ T P +P K P TK P+ + +
Sbjct: 989 KKTITTTEIMNKPEETAKPKDRATNSK---ATTPKPQKPTKAPKKPTSTKKPKTMPRVRK 1045
Query: 1674 SITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAGE 1733
T P+ P LN ++I + T + + +S E E AG
Sbjct: 1046 PKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPN------QTPNSKLVEVNPKSEDAGG 1099
Query: 1734 EEGE 1737
EGE
Sbjct: 1100 AEGE 1103
Score = 35.0 bits (79), Expect = 0.67
Identities = 96/510 (18%), Positives = 169/510 (33%), Gaps = 98/510 (19%)
Query: 93 TKQTATKTKTLQGPAE---KKPPSGSQAPRTKKQRVTKWQASEPAHSV-NGEGGVLASAP 148
T T TL+ PA KKP AP T K+ T +PA + G P
Sbjct: 707 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKE-PTSTTCDKPAPTTPKGTAPTTPKEP 765
Query: 149 DPPVLRETAQNTQTGNQ----QEPSPNLSREKT-------------------------RE 179
P +E A T G +EP+P ++ +E
Sbjct: 766 APTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKE 825
Query: 180 NVPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQ-QFKRADPERLRHASEECSLEAARE 238
P + +P P+ T P+P+ P T + +P + + +E + E + E
Sbjct: 826 TAPTTPKEPAPT--TPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAE 883
Query: 239 ------ENVPKDPQEEMMAGNVYGLGPPAPESDAAVALTLQQEFARVGASAHDDSLEEKG 292
EN PK+P G P ++ AA + +A D + E
Sbjct: 884 PTPKALENSPKEP------------GVPTTKTPAATK-------PEMTTTAKDKTTERD- 923
Query: 293 LFFCQICQKNLSAMNVTRREQHVNRCLDEAEKTLRPS-VPQIPECPICGKPFLTLKSRTS 351
+ +A +T+ E++ T + V TLK+ T
Sbjct: 924 --LRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTL 981
Query: 352 HLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSPPMFSFSDHSRGLKR-RGPTSKKEPRKR 410
K K + ++ +TA+P+ ++ + + K + PTS K+P+
Sbjct: 982 APKVTTTKKTITTTEIMNKPE-ETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTM 1040
Query: 411 RKVDEAPSEDLLVAMALSRSEMEPGAAVPALRLESAFSERIRP----------------- 453
+V + + M + E+ P + + L++ P
Sbjct: 1041 PRVRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGA 1100
Query: 454 EAENKSRKKKPPVSPPLLLVQDSETTGRQIEDRVAL--LLSEEVELSSTPPLPASRILKE 511
E E +P V P + D + R + + +LS+E + + P+ L+
Sbjct: 1101 EGETPHMLLRPHVFMP-EVTPDMDYLPRVPNQGIIINPMLSDETNICNGKPVDGLTTLRN 1159
Query: 512 G----------WERAGQCPPPPERKQSFLW 531
G W + PP P R+ + +W
Sbjct: 1160 GTLVAFRGHYFWMLSPFSPPSPARRITEVW 1189
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 44.3 bits (103), Expect = 0.001
Identities = 29/68 (42%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 545 FYTARLVPPLVPQRPAQGLMQEP--VPPLVPPEHSELSERRSPALHGT-PTAGCGSRGPS 601
F A L P VP RP G EP PP VPP LS+ SP L+G + R PS
Sbjct: 2033 FSYAALAGPTVPPRPEPGPSMEPSLTPPAVPPRAPILSKGPSPPLNGNILSCSPDRRSPS 2092
Query: 602 PSASQREH 609
P S R H
Sbjct: 2093 PKESGRSH 2100
Score = 32.3 bits (72), Expect = 4.4
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 793 TDSEGKPWEEK---EAENCESRAENFQELLRSMWADEEEEAETLLKSKDHEEDQENVNEA 849
T+ E WEEK EAE R E +E + D E+AE + H D+E +
Sbjct: 616 TEEEKDTWEEKKQREAERLPDRTEAREESEPEVKEDVIEKAELEEMEEVHPSDEEEEDAT 675
Query: 850 EMEEIYE-FAATQRKLLQEERAAGAGEDADWLEGGSP 885
+ E Y+ K+ R A G + L+G +P
Sbjct: 676 KAEGFYQKHMQEPLKVTPRSREAFGGRELG-LQGKAP 711
Score = 32.3 bits (72), Expect = 4.4
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 23/164 (14%)
Query: 112 PSGSQAPRTKKQRVTKWQASEPAHSVNGEGG-VLASAPDPPVLRETAQNTQTGNQQEPSP 170
P+ Q P + R S P S+ G LA AP PP T+ E +
Sbjct: 2175 PAPPQLPSPAEPR------SAPCGSLAFSGDRALALAPGPPT------RTRHDEYLEVTK 2222
Query: 171 NLSREKTRENVPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPERLRHASEE 230
S + + +P+ S P L + +P P+ P ++ A + +E
Sbjct: 2223 APSLDSSLPQLPSPSSPGAP--LLSNLPRPASPALSE------GSSSEATTPVISSVAER 2274
Query: 231 CS--LEAAREENVPKDPQEEMMAGNVYGLGPPAPESDAAVALTL 272
S LEAA +E+ DP E A +++ L P +P A++ L L
Sbjct: 2275 FSPSLEAAEQESGELDPGMEPAAHSLWDLTPLSPAPPASLDLAL 2318
Score = 31.2 bits (69), Expect = 9.7
Identities = 29/144 (20%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 1101 KERRSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSRSQKSSSKLNEEDEVILLLDSDEE 1160
+++ LE ++K + EK +++ P+ ++ + L ++D+ L D++
Sbjct: 1423 EQKDKALEPKDKDL---EEKDKALEQKDKIPEEKDKALEQKDTALEQKDKA--LEPKDKD 1477
Query: 1161 LELEQTKMKSISSDPLEEKKALEISPRSCELFSIIDVDAD------QEPSQSPPRSEAVL 1214
LE + ++ P E+ KAL+ RS E + D A+ ++ ++P +
Sbjct: 1478 LEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQAQ 1537
Query: 1215 QQED------EGALPENRGSLGRR 1232
+Q+D + AL + +LG++
Sbjct: 1538 EQKDKVSEKKDQALEQKYWALGQK 1561
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 44.3 bits (103), Expect = 0.001
Identities = 61/246 (24%), Positives = 75/246 (30%), Gaps = 48/246 (19%)
Query: 1314 QTPPPQTPSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPHPISGDRAHFSRRF 1373
Q PPPQ P PG +RQG RP P G H S L P S
Sbjct: 459 QRPPPQGG-----PPQPGPGP-QRQGPPLQQRPPPQGQQHLSGLGPPAGSP--------- 503
Query: 1374 LKHSPPGPSFLNQTPAGEVVEVGDSDDEQE-----------VASHQANRSPPLDSDPPIP 1422
L P P+ Q PA + Q A A+ SP + PP
Sbjct: 504 LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPP-- 561
Query: 1423 IDDCCWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSC 1482
P P G P + A +R G P G
Sbjct: 562 --QATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAG---PVPRTGPP 616
Query: 1483 TTQRKLQEKSSGAGSLGNSRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGL 1542
TTQ Q + SG G G +P Q+P + PP +AGG P+
Sbjct: 617 TTQ---QPRPSGPGPAGRPKPQL------------AQKPSQDVPPPATAAAGGPPHPQLK 661
Query: 1543 ETPKGA 1548
+P A
Sbjct: 662 ASPAQA 667
Score = 37.4 bits (85), Expect = 0.14
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 1650 GPGAHRPKGPAKTKGPRHQRKHHESITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDG 1709
GPG R P + + P ++H + PP+ SP + P Q PASQ + T G
Sbjct: 471 GPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQG 530
Query: 1710 SDS 1712
S
Sbjct: 531 RQS 533
Score = 36.6 bits (83), Expect = 0.23
Identities = 44/191 (23%), Positives = 68/191 (35%), Gaps = 17/191 (8%)
Query: 1371 RRFLKHSPPGPSFLNQTPAGEVVEVGDSDDEQEVASHQANRSPPLDSDPPIPIDDCCWHM 1430
R+ + + PG QTP+ + +G +Q A A + PP PP P
Sbjct: 420 RQRQRDASPGRGSHGQTPSPGALPLGRQTSQQP-AGPPAQQRPPPQGGPPQPGPGPQRQG 478
Query: 1431 EPLS--PIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRSPGLLDTTPIRGSCTTQRKL 1488
PL P P +L GP + S +R+ + + P P +G R +
Sbjct: 479 PPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAP--QQPASQAAPPTQGQGRQSRPV 536
Query: 1489 QEKSSGAGSLGNSRPSFLNSALWDVWDGEEQRPPETPPPAQMPSAGGAQKPEGLETPKGA 1548
+ G G+ +RP S QR P + S G P+ P G
Sbjct: 537 ---AGGPGAPPAARPPASPSP---------QRQAGPPQATRQTSVSGPAPPKASGAPPGG 584
Query: 1549 NRKKNLPPKVP 1559
+++ P K P
Sbjct: 585 QQRQGPPQKPP 595
Score = 32.0 bits (71), Expect = 5.7
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 13/115 (11%)
Query: 97 ATKTKTLQGPAEKKPPSGSQAPRTKKQRVTKWQASEPAHSVNGEGGVLASAPDP-PVLRE 155
AT+ ++ GPA PP S AP +QR P G G A PV R
Sbjct: 563 ATRQTSVSGPA---PPKASGAPPGGQQR------QGPPQKPPGPAGPTRQASQAGPVPRT 613
Query: 156 TAQNTQTGNQQEPSPNLSREKTRENVPNSDSQPPPSCLTTAVPSP---SKPRTAQ 207
TQ P P + P+ D PP + P P + P AQ
Sbjct: 614 GPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASPAQAQ 668
>gi|92091572 dedicator of cytokinesis 4 [Homo sapiens]
Length = 1966
Score = 43.9 bits (102), Expect = 0.001
Identities = 76/332 (22%), Positives = 123/332 (37%), Gaps = 39/332 (11%)
Query: 1241 RESSPSEASTTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVQAVTQHTPRASVGNRE 1300
R S+P+ S T + +PL+ + + S + +SS S Q V N +
Sbjct: 1612 RNSAPASVSPDGTRVIPRRSPLSYPAVNRYSSSSLSSQASAEVSNITGQSESSDEVFNMQ 1671
Query: 1301 GNEVAQKFSVIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHRSPSRPHPGGHPHSSPLAPH 1360
+ S +P + + SP SD + + R S P P S + P
Sbjct: 1672 PSPSTSSLSSTHSASPNVTSSAPSSARASPLLSD-KHKHSRENSCLSPRERP-CSAIYPT 1729
Query: 1361 PISGDRA----HFSRRFLKHSPPGPS----FLNQTPAGEVVEVGDSDDEQEVASHQANRS 1412
P+ + H L S P S +N TP+ ++ G + + ++ S
Sbjct: 1730 PVEPSQRMLFNHIGDGALPRSDPNLSAPEKAVNPTPSSWSLDSG--KEAKNMSDSGKLIS 1787
Query: 1413 PPLDSDPPIPIDDC--CWHMEPLSPIPIDHWNLERTGPLSTSSPSRRMNEAADSRDCRSP 1470
PP+ PP P H +SP P L+ + T SP + SP
Sbjct: 1788 PPV---PPRPTQTASPARHTTSVSPSPAGRSPLKGSVQSFTPSPV----------EYHSP 1834
Query: 1471 GLLDTTPIRGSCTTQRKLQEKSSGAGSLGNSRPSFLNSALWDVWDGEEQRPPETPPPAQM 1530
GL+ +P+ SSG SL SR S ++ ++ E+ P P P +
Sbjct: 1835 GLISNSPVLSG--------SYSSGISSL--SRCSTSETSGFENQVNEQSAPLPVPVPVPV 1884
Query: 1531 PSAGGAQ--KPEGLETPKGANRKKNLPPKVPI 1560
PS GG + + E P + ++ L VP+
Sbjct: 1885 PSYGGEEPVRKESKTPPPYSVYERTLRRPVPL 1916
>gi|4507161 SRY-box 11 [Homo sapiens]
Length = 441
Score = 43.9 bits (102), Expect = 0.001
Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 22/163 (13%)
Query: 1607 DSDSEDESQSSQPLLQAPHCQTLASQTYK-------PSRAGVHAQQEATTGPGAHRPKGP 1659
+ D EDE Q LLQ P Q SQ + P+ + + E+ G +
Sbjct: 242 EPDEEDEEPPHQQLLQPPGQQP--SQLLRRYNVAKVPASPTLSSSAESPEGASLYDEVRA 299
Query: 1660 AKTKGPRHQRKHHESITPPSRSPTKEAPPGLNDDAQIPASQESVATSVDGSDSSLSSQSS 1719
T G + + S ++ TK+ PP L A PAS SV+TS S S S S
Sbjct: 300 GATSGAGGGSRLYYSF----KNITKQHPPPLAQPALSPASSRSVSTSSSSSSGSSSGSSG 355
Query: 1720 S---------SCEFGAAFESAGEEEGEGEVSASQAAVQAADTD 1753
S F + SA E++ G +A ++ D D
Sbjct: 356 EDADDLMFDLSLNFSQSAHSASEQQLGGGAAAGNLSLSLVDKD 398
>gi|239743602 PREDICTED: hypothetical protein XP_002342903 [Homo
sapiens]
Length = 675
Score = 43.5 bits (101), Expect = 0.002
Identities = 112/495 (22%), Positives = 175/495 (35%), Gaps = 75/495 (15%)
Query: 850 EMEEIYEFAATQ--RKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQWDKVEEME 907
E +++ E AA + R L E+ AGA E + L +P W + E
Sbjct: 16 EAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPC-------------WFRPGYPE 62
Query: 908 PLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAPEQEAPEEALGHSSCSSPSRDCQA 967
+ ++ A +G P + S A AP P G+ + +
Sbjct: 63 AKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPP----GYPEAKKVAEEAAL 118
Query: 968 ERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITSEPEEQSGAVRERGLEVSHRLAPWQA 1027
E E LP A + + S I +EP+ + AV W
Sbjct: 119 EAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPA----------WPK 168
Query: 1028 SPPHPCRFLLGPPQGGS-------PRGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPS 1080
C F P Q GS PR + SG +S PR R + SP L++ +
Sbjct: 169 MVTESCYF---PAQRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDA 225
Query: 1081 KQKRDRSILTLSK--EPGHQKGKER-RSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSR 1137
K+ R S S+ + G Q GK R RS + C+ S I S P S +
Sbjct: 226 KRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKTTAT----TSSKRIVRRASLPSLSLKK 281
Query: 1138 SQKSSSKLNEEDEVI----LLLDSDEELELEQTKMKSISSDPLEEKKALEISPRSCELFS 1193
S + V+ L L ++E L+ +K ++ EEK A + SP +
Sbjct: 282 PIILRSSGCQVPTVLRRGYLQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLN 341
Query: 1194 IIDVDADQ----EPSQSPPRSEAVLQQE------DEGALPENRGSL---GRRGAPWLFCD 1240
++ + PS P S A L + L EN R G LF
Sbjct: 342 VVLNTLKRLKGLTPSSMPGLSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTG 401
Query: 1241 RESSPSEAS-----TTDTSWLVPATPLASRSRDCS---SQTQISSLRSGLAVQAVTQHTP 1292
+ P ++S T +LV ++ R + C + + S + G V+Q+T
Sbjct: 402 QGKGPGDSSCRVCCRCGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGG----RVSQYTC 457
Query: 1293 RASVGNREGNEVAQK 1307
A+ G +VA++
Sbjct: 458 CAAAPGSVGCQVAKQ 472
>gi|239743600 PREDICTED: hypothetical protein XP_002342902 [Homo
sapiens]
Length = 675
Score = 43.5 bits (101), Expect = 0.002
Identities = 112/495 (22%), Positives = 175/495 (35%), Gaps = 75/495 (15%)
Query: 850 EMEEIYEFAATQ--RKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQWDKVEEME 907
E +++ E AA + R L E+ AGA E + L +P W + E
Sbjct: 16 EAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPC-------------WFRPGYPE 62
Query: 908 PLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAPEQEAPEEALGHSSCSSPSRDCQA 967
+ ++ A +G P + S A AP P G+ + +
Sbjct: 63 AKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPP----GYPEAKKVAEEAAL 118
Query: 968 ERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITSEPEEQSGAVRERGLEVSHRLAPWQA 1027
E E LP A + + S I +EP+ + AV W
Sbjct: 119 EAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPA----------WPK 168
Query: 1028 SPPHPCRFLLGPPQGGS-------PRGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPS 1080
C F P Q GS PR + SG +S PR R + SP L++ +
Sbjct: 169 MVTESCYF---PAQRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDA 225
Query: 1081 KQKRDRSILTLSK--EPGHQKGKER-RSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSR 1137
K+ R S S+ + G Q GK R RS + C+ S I S P S +
Sbjct: 226 KRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKTTAT----TSSKRIVRRASLPSLSLKK 281
Query: 1138 SQKSSSKLNEEDEVI----LLLDSDEELELEQTKMKSISSDPLEEKKALEISPRSCELFS 1193
S + V+ L L ++E L+ +K ++ EEK A + SP +
Sbjct: 282 PIILRSSGCQVPTVLRRGYLQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLN 341
Query: 1194 IIDVDADQ----EPSQSPPRSEAVLQQE------DEGALPENRGSL---GRRGAPWLFCD 1240
++ + PS P S A L + L EN R G LF
Sbjct: 342 VVLNTLKRLKGLTPSSMPGLSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTG 401
Query: 1241 RESSPSEAS-----TTDTSWLVPATPLASRSRDCS---SQTQISSLRSGLAVQAVTQHTP 1292
+ P ++S T +LV ++ R + C + + S + G V+Q+T
Sbjct: 402 QGKGPGDSSCRVCCRCGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGG----RVSQYTC 457
Query: 1293 RASVGNREGNEVAQK 1307
A+ G +VA++
Sbjct: 458 CAAAPGSVGCQVAKQ 472
>gi|239743598 PREDICTED: hypothetical protein XP_002342901 [Homo
sapiens]
Length = 675
Score = 43.5 bits (101), Expect = 0.002
Identities = 112/495 (22%), Positives = 175/495 (35%), Gaps = 75/495 (15%)
Query: 850 EMEEIYEFAATQ--RKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQWDKVEEME 907
E +++ E AA + R L E+ AGA E + L +P W + E
Sbjct: 16 EAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPC-------------WFRPGYPE 62
Query: 908 PLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAPEQEAPEEALGHSSCSSPSRDCQA 967
+ ++ A +G P + S A AP P G+ + +
Sbjct: 63 AKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPP----GYPEAKKVAEEAAL 118
Query: 968 ERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITSEPEEQSGAVRERGLEVSHRLAPWQA 1027
E E LP A + + S I +EP+ + AV W
Sbjct: 119 EAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPA----------WPK 168
Query: 1028 SPPHPCRFLLGPPQGGS-------PRGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPS 1080
C F P Q GS PR + SG +S PR R + SP L++ +
Sbjct: 169 MVTESCYF---PAQRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDA 225
Query: 1081 KQKRDRSILTLSK--EPGHQKGKER-RSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSR 1137
K+ R S S+ + G Q GK R RS + C+ S I S P S +
Sbjct: 226 KRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKTTAT----TSSKRIVRRASLPSLSLKK 281
Query: 1138 SQKSSSKLNEEDEVI----LLLDSDEELELEQTKMKSISSDPLEEKKALEISPRSCELFS 1193
S + V+ L L ++E L+ +K ++ EEK A + SP +
Sbjct: 282 PIILRSSGCQVPTVLRRGYLQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLN 341
Query: 1194 IIDVDADQ----EPSQSPPRSEAVLQQE------DEGALPENRGSL---GRRGAPWLFCD 1240
++ + PS P S A L + L EN R G LF
Sbjct: 342 VVLNTLKRLKGLTPSSMPGLSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTG 401
Query: 1241 RESSPSEAS-----TTDTSWLVPATPLASRSRDCS---SQTQISSLRSGLAVQAVTQHTP 1292
+ P ++S T +LV ++ R + C + + S + G V+Q+T
Sbjct: 402 QGKGPGDSSCRVCCRCGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGG----RVSQYTC 457
Query: 1293 RASVGNREGNEVAQK 1307
A+ G +VA++
Sbjct: 458 CAAAPGSVGCQVAKQ 472
>gi|239743596 PREDICTED: hypothetical protein XP_002342900 [Homo
sapiens]
Length = 675
Score = 43.5 bits (101), Expect = 0.002
Identities = 112/495 (22%), Positives = 175/495 (35%), Gaps = 75/495 (15%)
Query: 850 EMEEIYEFAATQ--RKLLQEERAAGAGEDADWLEGGSPVSGQLLAGVQVQKQWDKVEEME 907
E +++ E AA + R L E+ AGA E + L +P W + E
Sbjct: 16 EAKKVAEEAALEASRHLGGEQSQAGAPEGSKMLRATAPC-------------WFRPGYPE 62
Query: 908 PLEPGRDEAATTWEKMGQCALPPPQGQHSGARGAEAPEQEAPEEALGHSSCSSPSRDCQA 967
+ ++ A +G P + S A AP P G+ + +
Sbjct: 63 AKKVAKEAAPEASRHLGAEQSPAGAPEGSKMLRATAPCWFPP----GYPEAKKVAEEAAL 118
Query: 968 ERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITSEPEEQSGAVRERGLEVSHRLAPWQA 1027
E E LP A + + S I +EP+ + AV W
Sbjct: 119 EAPEFPLPSHQPAQSFGLWVPQMHKQASAFVDIQAEPQNRGPAVPPA----------WPK 168
Query: 1028 SPPHPCRFLLGPPQGGS-------PRGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPS 1080
C F P Q GS PR + SG +S PR R + SP L++ +
Sbjct: 169 MVTESCYF---PAQRGSACRLPAAPRLTERPSGVRISAPRKRKTIAHSSSPCLVTGYTDA 225
Query: 1081 KQKRDRSILTLSK--EPGHQKGKER-RSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSR 1137
K+ R S S+ + G Q GK R RS + C+ S I S P S +
Sbjct: 226 KRTRVASSSQRSRGSKVGRQPGKTRNRSGMACKTTAT----TSSKRIVRRASLPSLSLKK 281
Query: 1138 SQKSSSKLNEEDEVI----LLLDSDEELELEQTKMKSISSDPLEEKKALEISPRSCELFS 1193
S + V+ L L ++E L+ +K ++ EEK A + SP +
Sbjct: 282 PIILRSSGCQVPTVLRRGYLQLFTEECLKFCASKQEAEEKALNEEKVAYDCSPNKNRYLN 341
Query: 1194 IIDVDADQ----EPSQSPPRSEAVLQQE------DEGALPENRGSL---GRRGAPWLFCD 1240
++ + PS P S A L + L EN R G LF
Sbjct: 342 VVLNTLKRLKGLTPSSMPGLSRAALYSRLQEFLLTQDQLKENGYPFPHPERPGGAVLFTG 401
Query: 1241 RESSPSEAS-----TTDTSWLVPATPLASRSRDCS---SQTQISSLRSGLAVQAVTQHTP 1292
+ P ++S T +LV ++ R + C + + S + G V+Q+T
Sbjct: 402 QGKGPGDSSCRVCCRCGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGG----RVSQYTC 457
Query: 1293 RASVGNREGNEVAQK 1307
A+ G +VA++
Sbjct: 458 CAAAPGSVGCQVAKQ 472
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 43.5 bits (101), Expect = 0.002
Identities = 56/227 (24%), Positives = 89/227 (39%), Gaps = 28/227 (12%)
Query: 757 TADTGLPPGLSSELSSLAHRFGVSELVHLCEQVPIATDSEGKPWEEKEAENCESRAENFQ 816
T G PP L +L+ ++++ + E + EE+E E E E +
Sbjct: 865 TPGGGGPPALEEDLT----------VININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEE 914
Query: 817 ELLRSMWADEEEEAETLLKSKDHEEDQENVNEAEMEEIYEFAATQRKLLQEERAAGAGED 876
E + +EEEE E ++ EE++ + E E EE E + + L+E G
Sbjct: 915 EDEEEYFEEEEEEEEEF--EEEFEEEEGELEEEEEEEDEE----EEEELEEVEDLEFGTA 968
Query: 877 ADWLEGGSPVSGQLLAGVQVQKQWDKVEEMEPLEPG---RDEAATTWEKMGQCALP---- 929
+E G+P L + + KV+ EPG E T E+ G P
Sbjct: 969 GGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTLAP 1028
Query: 930 ---PPQGQHSGARGAEAPEQEAPEEALGHSSCSSPSRDCQAERKEGS 973
P QG+ R E+P P + L S+P + E ++GS
Sbjct: 1029 EALPSQGEVE--REGESPAAGPPPQELVEEEPSAPPTLLEEETEDGS 1073
Score = 31.6 bits (70), Expect = 7.4
Identities = 66/321 (20%), Positives = 105/321 (32%), Gaps = 77/321 (23%)
Query: 924 GQCALPPPQGQHSGARGAEAP---------------------EQEAPEEALGHSSCSSPS 962
G LPPPQ G G P E+E EE
Sbjct: 851 GPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDF 910
Query: 963 RDCQAERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITSEPEEQ------------SGA 1010
+ + + +E ++ ++E+ F +GE+ E + E EE+ +G
Sbjct: 911 EEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGG 970
Query: 1011 VRERGLEVSHRLAPWQASPPHPCRFLLGPPQGGSPRGSHHTSGSSLSTPRSRGGTSQVGS 1070
E G L P P P + P P T RG + +
Sbjct: 971 EVEEGAPPPPTLPPALPPPESPPKVQPEP----EPEPGLLLEVEEPGTEEERGADT---A 1023
Query: 1071 PTLLSPAVPSKQKRDRSILTLSKEPGHQKGKERRSVLECRNKGVLMFPEKSPSIDLTQSN 1130
PTL A+PS+ + +R + + P Q+ E+ PS +
Sbjct: 1024 PTLAPEALPSQGEVEREGESPAAGPPPQE-----------------LVEEEPS-----AP 1061
Query: 1131 PDHSSSRSQKSSSKLNEEDEVILLLDSDEELELEQTKMKSISSDPLEEKKALEISPRSCE 1190
P ++ S K+ E ++EE+E E ++ L+EK E +
Sbjct: 1062 PTLLEEETEDGSDKVQPPPET----PAEEEMETE------TEAEALQEK---EQDDTAAM 1108
Query: 1191 LFSIIDVDADQEPSQSPPRSE 1211
L ID D E + PP +E
Sbjct: 1109 LADFIDCPPDDE--KPPPPTE 1127
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,035,816
Number of Sequences: 37866
Number of extensions: 5226146
Number of successful extensions: 30619
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 899
Number of HSP's that attempted gapping in prelim test: 25456
Number of HSP's gapped (non-prelim): 6197
length of query: 1834
length of database: 18,247,518
effective HSP length: 117
effective length of query: 1717
effective length of database: 13,817,196
effective search space: 23724125532
effective search space used: 23724125532
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.