BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|63054850 terminal deoxynucleotidyltransferase isoform 1 [Homo sapiens] (509 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|63054850 terminal deoxynucleotidyltransferase isoform 1 [Homo... 1021 0.0 gi|63054852 terminal deoxynucleotidyltransferase isoform 2 [Homo... 1014 0.0 gi|7019493 DNA-directed DNA polymerase mu [Homo sapiens] 377 e-104 gi|7019491 DNA-directed DNA polymerase lambda [Homo sapiens] 124 2e-28 gi|4505931 DNA-directed DNA polymerase beta [Homo sapiens] 95 2e-19 gi|7706645 protein phosphatase methylesterase 1 [Homo sapiens] 31 2.3 gi|214831834 transmembrane protein 169 [Homo sapiens] 31 3.0 gi|19923913 transmembrane protein 169 [Homo sapiens] 31 3.0 gi|214831799 transmembrane protein 169 [Homo sapiens] 31 3.0 gi|214831780 transmembrane protein 169 [Homo sapiens] 31 3.0 gi|239757716 PREDICTED: hypothetical protein [Homo sapiens] 30 4.0 gi|239752203 PREDICTED: hypothetical protein [Homo sapiens] 30 4.0 gi|239746726 PREDICTED: hypothetical protein [Homo sapiens] 30 4.0 gi|30023820 hypothetical protein LOC162427 [Homo sapiens] 30 4.0 gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Ho... 30 6.8 gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Ho... 30 6.8 gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Ho... 30 6.8 gi|145553976 zinc finger, CW type with coiled-coil domain 2 isof... 30 6.8 gi|145553971 zinc finger, CW type with coiled-coil domain 2 isof... 30 6.8 gi|169202726 PREDICTED: similar to ring finger protein 18 isofor... 29 8.9 gi|239755488 PREDICTED: similar to ring finger protein 18 isofor... 29 8.9 gi|169203362 PREDICTED: similar to ring finger protein 18 [Homo ... 29 8.9 gi|27484954 PREDICTED: similar to ring finger protein 18 [Homo s... 29 8.9 gi|115648142 centrosomal protein 164kDa [Homo sapiens] 29 8.9 gi|31377566 ring finger protein 168 [Homo sapiens] 29 8.9 >gi|63054850 terminal deoxynucleotidyltransferase isoform 1 [Homo sapiens] Length = 509 Score = 1021 bits (2640), Expect = 0.0 Identities = 509/509 (100%), Positives = 509/509 (100%) Query: 1 MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG 60 MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG Sbjct: 1 MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG 60 Query: 61 FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT 120 FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT Sbjct: 61 FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT 120 Query: 121 GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE 180 GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE Sbjct: 121 GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE 180 Query: 181 FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV 240 FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV Sbjct: 181 FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV 240 Query: 241 LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV 300 LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV Sbjct: 241 LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV 300 Query: 301 SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL 360 SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL Sbjct: 301 SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL 360 Query: 361 LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS 420 LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS Sbjct: 361 LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS 420 Query: 421 WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRQFERDLRRYATHERKMILDNHALYDKT 480 WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRQFERDLRRYATHERKMILDNHALYDKT Sbjct: 421 WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRQFERDLRRYATHERKMILDNHALYDKT 480 Query: 481 KRIFLKAESEEEIFAHLGLDYIEPWERNA 509 KRIFLKAESEEEIFAHLGLDYIEPWERNA Sbjct: 481 KRIFLKAESEEEIFAHLGLDYIEPWERNA 509 >gi|63054852 terminal deoxynucleotidyltransferase isoform 2 [Homo sapiens] Length = 508 Score = 1014 bits (2623), Expect = 0.0 Identities = 508/509 (99%), Positives = 508/509 (99%), Gaps = 1/509 (0%) Query: 1 MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG 60 MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG Sbjct: 1 MDPPRASHLSPRKKRPRQTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKG 60 Query: 61 FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT 120 FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT Sbjct: 61 FRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMT 120 Query: 121 GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE 180 GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE Sbjct: 121 GKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCE 180 Query: 181 FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV 240 FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV Sbjct: 181 FRENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAV 240 Query: 241 LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV 300 LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV Sbjct: 241 LNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLV 300 Query: 301 SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL 360 SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL Sbjct: 301 SCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQL 360 Query: 361 LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS 420 LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS Sbjct: 361 LQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSS 420 Query: 421 WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRQFERDLRRYATHERKMILDNHALYDKT 480 WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSR FERDLRRYATHERKMILDNHALYDKT Sbjct: 421 WQEGKTWKAIRVDLVLCPYERRAFALLGWTGSR-FERDLRRYATHERKMILDNHALYDKT 479 Query: 481 KRIFLKAESEEEIFAHLGLDYIEPWERNA 509 KRIFLKAESEEEIFAHLGLDYIEPWERNA Sbjct: 480 KRIFLKAESEEEIFAHLGLDYIEPWERNA 508 >gi|7019493 DNA-directed DNA polymerase mu [Homo sapiens] Length = 494 Score = 377 bits (968), Expect = e-104 Identities = 206/507 (40%), Positives = 313/507 (61%), Gaps = 23/507 (4%) Query: 11 PRKKRPR---QTGALMASSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKGFRVENEL 67 P+++R R +G +S+P +F + ++++E +MG +RRAFL LAR KGFRV + Sbjct: 3 PKRRRARVGSPSGDAASSTPPSTRFPGVAIYLVEPRMGRSRRAFLTGLARSKGFRVLDAC 62 Query: 68 SDSVTHIVAENNSGSDVLEWLQAQKVQVS---SQPELLDVSWLIECIRAGKPVEMTGKHQ 124 S TH+V E S + + W + + + P LLD+SWL E + AG+PV + +H+ Sbjct: 63 SSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLDISWLTESLGAGQPVPVECRHR 122 Query: 125 LVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCEFREN 184 L V P+ P++ + YACQR T L + N ++A +ILAE F + Sbjct: 123 LEV----------AGPRKGPLSPAWMPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGS 172 Query: 185 EDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAVLNDE 244 E +TF RAASVLK+LP + ++ +G+P G +++E++E G EV+ V E Sbjct: 173 EGRLLTFCRAASVLKALPSPVTTLSQLQGLPHFGEHSSRVVQELLEHGVCEEVERVRRSE 232 Query: 245 RYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLVSCVT 304 RYQ+ KLFT +FGVG+KT+++W+R G RTL +R ++ K T+ QKAG +++DL + V Sbjct: 233 RYQTMKLFTQIFGVGVKTADRWYREGLRTLDDLR-EQPQKLTQQQKAGLQHHQDLSTPVL 291 Query: 305 RAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQKV 364 R++ +A+ +V+EAV LP A VT+TGGFRRGK GHDVDFLIT P + E LL +V Sbjct: 292 RSDVDALQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHPKEGQ-EAGLLPRV 350 Query: 365 MNLWEKKGLLLYYDLVESTFEKLRLPSR--KVDALDHFQKCFLIFKLPRQRVDSDQSSWQ 422 M + +GL+LY+ S E P+R + +D F++ F IF+LP+ + S + Sbjct: 351 MCRLQDQGLILYHQHQHSCCES---PTRLAQQSHMDAFERSFCIFRLPQPPGAAVGGSTR 407 Query: 423 EGKTWKAIRVDLVLCPYERRAFALLGWTGSRQFERDLRRYATHERKMILDNHALYDKTKR 482 +WKA+RVDLV+ P + FALLGWTGS+ F+R+LRR++ E+ + L++H L+D ++ Sbjct: 408 PCPSWKAVRVDLVVAPVSQFPFALLGWTGSKLFQRELRRFSRKEKGLWLNSHGLFDPEQK 467 Query: 483 IFLKAESEEEIFAHLGLDYIEPWERNA 509 F +A SEE+IF HLGL+Y+ P +RNA Sbjct: 468 TFFQAASEEDIFRHLGLEYLPPEQRNA 494 >gi|7019491 DNA-directed DNA polymerase lambda [Homo sapiens] Length = 575 Score = 124 bits (312), Expect = 2e-28 Identities = 106/381 (27%), Positives = 172/381 (45%), Gaps = 47/381 (12%) Query: 140 PKTPPIAVQK--ISQYACQRRTTLNNCNQIFTDAFDILAENCEFRENEDSCVTFMRAASV 197 P P + K +Q + Q+ T N N T+ ++LA+ + ++ + + +A + Sbjct: 229 PSPAPAVLDKWVCAQPSSQKAT---NHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINA 285 Query: 198 LKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAVLNDERYQSFKLFTSVFG 257 LKS + S ++ IP +G ++ I EI+E G ++ + E +LF++++G Sbjct: 286 LKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHI--SESVPVLELFSNIWG 343 Query: 258 VGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLVSCVTRAEAEAVSVLVKE 317 G KT++ W++ GFR+L +RS SL T Q G +Y D + + R EA + V++ Sbjct: 344 AGTKTAQMWYQQGFRSLEDIRSQASL--TTQQAIGLKHYSDFLERMPREEATEIEQTVQK 401 Query: 318 AVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQKVMNLWEKKGLLLYY 377 A AF G +RRGK DVD LIT P + ++++ ++G L Sbjct: 402 AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDG-RSHRGIFSRLLDSLRQEGFLT-D 459 Query: 378 DLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSSWQEGKTWKAIRVDLVLC 437 DLV + QK + +LP G + R+D+++ Sbjct: 460 DLVSQ------------EENGQQQKYLGVCRLP-------------GPGRRHRRLDIIVV 494 Query: 438 PYERRAFALLGWTGSRQFERDLRRYATHERKMILDNHALYDKTKR----------IFLKA 487 PY A ALL +TGS F R +R A + M L HAL R L Sbjct: 495 PYSEFACALLYFTGSAHFNRSMRALA-KTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPT 553 Query: 488 ESEEEIFAHLGLDYIEPWERN 508 +E+++F LGL Y EP ER+ Sbjct: 554 PTEKDVFRLLGLPYREPAERD 574 >gi|4505931 DNA-directed DNA polymerase beta [Homo sapiens] Length = 335 Score = 94.7 bits (234), Expect = 2e-19 Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 36/345 (10%) Query: 173 DILAENCEFRENEDSCV----TFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEI 228 D+L E F +N + + +AASV+ P I S + + +P +G+K+ I+E Sbjct: 17 DMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEF 76 Query: 229 IEDGESSEVKAVLNDERYQSFKLFTSVFGVGLKTSEKWFRMGFRTLSKVRSDKSLKFTRM 288 + G+ +++ + D+ S T V G+G + K+ G +TL +R ++ K Sbjct: 77 LATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNED-KLNHH 135 Query: 289 QKAGFLYYEDLVSCVTRAEAEAVSVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVDFLI 348 Q+ G Y+ D + R E + +V V + T+ G FRRG + D+D L+ Sbjct: 136 QRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLL 195 Query: 349 TSPGSTEDEEQLLQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALDHFQKCFL-IF 407 T P T + + + L+ E+L+ D L + F+ + Sbjct: 196 THPSFTSESTKQPK----------------LLHQVVEQLQKVHFITDTLSKGETKFMGVC 239 Query: 408 KLPRQRVDSDQSSWQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRQFERDLRRYATHER 467 +LP S + K + R+D+ L P ++ +L +TGS F +++R +A E+ Sbjct: 240 QLP---------SKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHAL-EK 289 Query: 468 KMILDNHAL----YDKTKRIFLKAESEEEIFAHLGLDYIEPWERN 508 ++ + + L +SE++IF ++ Y EP +R+ Sbjct: 290 GFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRS 334 >gi|7706645 protein phosphatase methylesterase 1 [Homo sapiens] Length = 386 Score = 31.2 bits (69), Expect = 2.3 Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 22/148 (14%) Query: 208 MKDTEGIPCL-GSK--VKGIIEEIIEDGESSE-VKAVLNDERYQSFKLFTSVFGVGLKTS 263 +K EGI GSK V+GIIEE ED E SE + ++ ++ K + + L + Sbjct: 235 VKQCEGITSPEGSKSIVEGIIEEEEEDEEGSESISKRKKEDDMETKKDHPYTWRIELAKT 294 Query: 264 EKWFRMGFRTLSKV----------------RSDKSLKFTRMQKAGFLYYEDLVSCVTRAE 307 EK++ FR LS + R DK L +MQ G + L C Sbjct: 295 EKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQ--GKFQMQVLPQCGHAVH 352 Query: 308 AEAVSVLVKEAVWAFLPDAFVTMTGGFR 335 +A + + + F GGF+ Sbjct: 353 EDAPDKVAEAVATFLIRHRFAEPIGGFQ 380 >gi|214831834 transmembrane protein 169 [Homo sapiens] Length = 297 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Query: 315 VKEAVWAF-LPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQK 363 V + +W L +VT+TG RGKK G VD +T TE E Q L K Sbjct: 88 VDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHVT---LTEKELQELTK 134 >gi|19923913 transmembrane protein 169 [Homo sapiens] Length = 297 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Query: 315 VKEAVWAF-LPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQK 363 V + +W L +VT+TG RGKK G VD +T TE E Q L K Sbjct: 88 VDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHVT---LTEKELQELTK 134 >gi|214831799 transmembrane protein 169 [Homo sapiens] Length = 297 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Query: 315 VKEAVWAF-LPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQK 363 V + +W L +VT+TG RGKK G VD +T TE E Q L K Sbjct: 88 VDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHVT---LTEKELQELTK 134 >gi|214831780 transmembrane protein 169 [Homo sapiens] Length = 297 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Query: 315 VKEAVWAF-LPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQK 363 V + +W L +VT+TG RGKK G VD +T TE E Q L K Sbjct: 88 VDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHVT---LTEKELQELTK 134 >gi|239757716 PREDICTED: hypothetical protein [Homo sapiens] Length = 477 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 117 VEMTGKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIF 168 ++ GK+ L+VRR+ + ST P P IS+ C + +N NQ++ Sbjct: 348 LQQHGKNVLIVRREKTTST----PDCTPTYTDVISETLCSMKKRKDNLNQLY 395 >gi|239752203 PREDICTED: hypothetical protein [Homo sapiens] Length = 477 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 117 VEMTGKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIF 168 ++ GK+ L+VRR+ + ST P P IS+ C + +N NQ++ Sbjct: 348 LQQHGKNVLIVRREKTTST----PDCTPTYTDVISETLCSMKKRKDNLNQLY 395 >gi|239746726 PREDICTED: hypothetical protein [Homo sapiens] Length = 477 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 117 VEMTGKHQLVVRRDYSDSTNPGPPKTPPIAVQKISQYACQRRTTLNNCNQIF 168 ++ GK+ L+VRR+ + ST P P IS+ C + +N NQ++ Sbjct: 348 LQQHGKNVLIVRREKTTST----PDCTPTYTDVISETLCSMKKRKDNLNQLY 395 >gi|30023820 hypothetical protein LOC162427 [Homo sapiens] Length = 466 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 13/56 (23%) Query: 440 ERRAFALLGWTGSRQFERDLRRYATHERKMILDNHALYDKTKRIFLKAESEEEIFA 495 +R F++ G+ S+Q ER LRR A H + +DNH ++SEEE+ A Sbjct: 224 QRLDFSVRGYMMSKQRERQLRRRALHPER-AMDNH------------SDSEEELAA 266 >gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Homo sapiens] Length = 626 Score = 29.6 bits (65), Expect = 6.8 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Query: 64 ENELSDSVTHIVAENNSG-SDVLEWLQA---QKVQVSSQPELLDVSWLIECIRAGKPVEM 119 EN L + AE S S ++W+ + ++Q + + +V L+ A K E Sbjct: 114 ENALPELAKAEEAERASAVSTAVQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQED 173 Query: 120 TGKHQLVVRRDYSDSTNPGPPKTPP 144 G+ +L +YS P PP PP Sbjct: 174 KGRKELEKSLEYSTVPTPLPPVPPP 198 >gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Homo sapiens] Length = 626 Score = 29.6 bits (65), Expect = 6.8 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Query: 64 ENELSDSVTHIVAENNSG-SDVLEWLQA---QKVQVSSQPELLDVSWLIECIRAGKPVEM 119 EN L + AE S S ++W+ + ++Q + + +V L+ A K E Sbjct: 114 ENALPELAKAEEAERASAVSTAVQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQED 173 Query: 120 TGKHQLVVRRDYSDSTNPGPPKTPP 144 G+ +L +YS P PP PP Sbjct: 174 KGRKELEKSLEYSTVPTPLPPVPPP 198 >gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Homo sapiens] Length = 626 Score = 29.6 bits (65), Expect = 6.8 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Query: 64 ENELSDSVTHIVAENNSG-SDVLEWLQA---QKVQVSSQPELLDVSWLIECIRAGKPVEM 119 EN L + AE S S ++W+ + ++Q + + +V L+ A K E Sbjct: 114 ENALPELAKAEEAERASAVSTAVQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQED 173 Query: 120 TGKHQLVVRRDYSDSTNPGPPKTPP 144 G+ +L +YS P PP PP Sbjct: 174 KGRKELEKSLEYSTVPTPLPPVPPP 198 >gi|145553976 zinc finger, CW type with coiled-coil domain 2 isoform a [Homo sapiens] Length = 937 Score = 29.6 bits (65), Expect = 6.8 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 57 RRKGFRVENELSDSVTHIVA-ENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGK 115 +R+G + EL D + +VA E+N GS + K +V+ P + V +G Sbjct: 652 QRQGSLLPEELEDQMPRLVAEESNRGSTTI-----NKEEVNKGPFVAVVGVAKGVRDSGA 706 Query: 116 PVEMT--GKHQLVVRRDYSDSTNPGPPKTPPIAV 147 P+++ + +L RR +S NP P A+ Sbjct: 707 PIQLIPFNREELAERRKAVESWNPVPYSVASAAI 740 >gi|145553971 zinc finger, CW type with coiled-coil domain 2 isoform b [Homo sapiens] Length = 900 Score = 29.6 bits (65), Expect = 6.8 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 57 RRKGFRVENELSDSVTHIVA-ENNSGSDVLEWLQAQKVQVSSQPELLDVSWLIECIRAGK 115 +R+G + EL D + +VA E+N GS + K +V+ P + V +G Sbjct: 652 QRQGSLLPEELEDQMPRLVAEESNRGSTTI-----NKEEVNKGPFVAVVGVAKGVRDSGA 706 Query: 116 PVEMT--GKHQLVVRRDYSDSTNPGPPKTPPIAV 147 P+++ + +L RR +S NP P A+ Sbjct: 707 PIQLIPFNREELAERRKAVESWNPVPYSVASAAI 740 >gi|169202726 PREDICTED: similar to ring finger protein 18 isoform 1 [Homo sapiens] Length = 452 Score = 29.3 bits (64), Expect = 8.9 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 19/77 (24%) Query: 312 SVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVD-----FLITSP-------------GS 353 S+ K ++W FL M G R KKM +VD L +S + Sbjct: 75 SLARKVSLWLFLSSE-EQMCGTHRETKKMFCEVDRSLLCLLCSSSQEHRDHRHCPIESAA 133 Query: 354 TEDEEQLLQKVMNLWEK 370 E +E+LLQK+ +LWEK Sbjct: 134 EEHQEKLLQKMQSLWEK 150 >gi|239755488 PREDICTED: similar to ring finger protein 18 isoform 2 [Homo sapiens] Length = 446 Score = 29.3 bits (64), Expect = 8.9 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 19/77 (24%) Query: 312 SVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVD-----FLITSP-------------GS 353 S+ K ++W FL M G R KKM +VD L +S + Sbjct: 75 SLARKVSLWLFLSSE-EQMCGTHRETKKMFCEVDRSLLCLLCSSSQEHRDHRHCPIESAA 133 Query: 354 TEDEEQLLQKVMNLWEK 370 E +E+LLQK+ +LWEK Sbjct: 134 EEHQEKLLQKMQSLWEK 150 >gi|169203362 PREDICTED: similar to ring finger protein 18 [Homo sapiens] Length = 452 Score = 29.3 bits (64), Expect = 8.9 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 19/77 (24%) Query: 312 SVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVD-----FLITSP-------------GS 353 S+ K ++W FL M G R KKM +VD L +S + Sbjct: 75 SLARKVSLWLFLSSE-EQMCGTHRETKKMFCEVDRSLLCLLCSSSQEHRDHRHCPIESAA 133 Query: 354 TEDEEQLLQKVMNLWEK 370 E +E+LLQK+ +LWEK Sbjct: 134 EEHQEKLLQKMQSLWEK 150 >gi|27484954 PREDICTED: similar to ring finger protein 18 [Homo sapiens] Length = 452 Score = 29.3 bits (64), Expect = 8.9 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 19/77 (24%) Query: 312 SVLVKEAVWAFLPDAFVTMTGGFRRGKKMGHDVD-----FLITSP-------------GS 353 S+ K ++W FL M G R KKM +VD L +S + Sbjct: 75 SLARKVSLWLFLSSE-EQMCGTHRETKKMFCEVDRSLLCLLCSSSQEHRDHRHCPIESAA 133 Query: 354 TEDEEQLLQKVMNLWEK 370 E +E+LLQK+ +LWEK Sbjct: 134 EEHQEKLLQKMQSLWEK 150 >gi|115648142 centrosomal protein 164kDa [Homo sapiens] Length = 1460 Score = 29.3 bits (64), Expect = 8.9 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 11/75 (14%) Query: 39 ILEKKMGTTRRAF--LMELARRKGFRVEN---------ELSDSVTHIVAENNSGSDVLEW 87 +LE + T RR L+++ R+ + E E TH++ N ++L+ Sbjct: 944 LLEVQEETARREKQQLLDVQRQVALKSEEATATHQQLEEAQKEHTHLLQSNQQLREILDE 1003 Query: 88 LQAQKVQVSSQPELL 102 LQA+K+++ SQ +LL Sbjct: 1004 LQARKLKLESQVDLL 1018 >gi|31377566 ring finger protein 168 [Homo sapiens] Length = 571 Score = 29.3 bits (64), Expect = 8.9 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 183 ENEDSCVTFMRAASVLKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEV 237 ENE+SC+ + S K+ + ++KD PC +K + + E D E +E+ Sbjct: 373 ENEESCLLISKEISKRKNQESSFEAVKD----PCFSAKRRKVSPESSPDQEETEI 423 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.135 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,234,334 Number of Sequences: 37866 Number of extensions: 823860 Number of successful extensions: 2062 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 2044 Number of HSP's gapped (non-prelim): 27 length of query: 509 length of database: 18,247,518 effective HSP length: 107 effective length of query: 402 effective length of database: 14,195,856 effective search space: 5706734112 effective search space used: 5706734112 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.