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Search of human proteins with 63025212
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|63025212 metallo-beta-lactamase domain containing 1 [Homo
sapiens]
(266 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|63025212 metallo-beta-lactamase domain containing 1 [Homo sap... 542 e-154
gi|7705793 lactamase, beta 2 [Homo sapiens] 38 0.010
gi|153791158 keratin 75 [Homo sapiens] 33 0.26
gi|41327741 ETHE1 protein [Homo sapiens] 33 0.34
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 32 0.44
gi|47419907 T-box 3 protein isoform 2 [Homo sapiens] 32 0.58
gi|47419905 T-box 3 protein isoform 1 [Homo sapiens] 32 0.58
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 32 0.75
gi|38372909 jumonji domain containing 1B [Homo sapiens] 31 0.98
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 31 0.98
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 31 0.98
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 31 0.98
gi|149944548 neurobeachin-like 2 [Homo sapiens] 31 1.3
gi|134142824 forkhead box D2 [Homo sapiens] 30 1.7
gi|58743323 XK, Kell blood group complex subunit-related family,... 30 1.7
gi|8923582 zinc finger protein 446 [Homo sapiens] 30 2.2
gi|5454102 transforming, acidic coiled-coil containing protein 3... 30 2.9
gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens] 30 2.9
gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens] 30 2.9
gi|239756199 PREDICTED: hypothetical protein [Homo sapiens] 29 3.7
gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo... 29 3.7
gi|213972634 tumor protein p53 binding protein 1 isoform 2 [Homo... 29 3.7
gi|5032189 tumor protein p53 binding protein 1 isoform 3 [Homo s... 29 3.7
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 29 3.7
gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens] 29 3.7
gi|187761351 growth factor independent 1 [Homo sapiens] 29 3.7
gi|187761349 growth factor independent 1 [Homo sapiens] 29 3.7
gi|71037377 growth factor independent 1 [Homo sapiens] 29 3.7
gi|239756776 PREDICTED: similar to transformation related protei... 29 4.9
gi|239751263 PREDICTED: hypothetical protein XP_002347773 [Homo ... 29 4.9
>gi|63025212 metallo-beta-lactamase domain containing 1 [Homo
sapiens]
Length = 266
Score = 542 bits (1396), Expect = e-154
Identities = 266/266 (100%), Positives = 266/266 (100%)
Query: 1 MRTEPLCGASPLLVPGDPYSVVVLLQGYAEPEGVGDAVRADGSVTLVLPQTRGPASSHRE 60
MRTEPLCGASPLLVPGDPYSVVVLLQGYAEPEGVGDAVRADGSVTLVLPQTRGPASSHRE
Sbjct: 1 MRTEPLCGASPLLVPGDPYSVVVLLQGYAEPEGVGDAVRADGSVTLVLPQTRGPASSHRE 60
Query: 61 SPRGSGGAEAALEEAARGPILVDTGGPWAREALLGALAGQGVAPGDVTLVVGTHGHSDHI 120
SPRGSGGAEAALEEAARGPILVDTGGPWAREALLGALAGQGVAPGDVTLVVGTHGHSDHI
Sbjct: 61 SPRGSGGAEAALEEAARGPILVDTGGPWAREALLGALAGQGVAPGDVTLVVGTHGHSDHI 120
Query: 121 GNLGLFPGAALLVSHDFCLPGGRYLPHGLGEGQPLRLGPGLEVWATPGHGGQRDVSVVVA 180
GNLGLFPGAALLVSHDFCLPGGRYLPHGLGEGQPLRLGPGLEVWATPGHGGQRDVSVVVA
Sbjct: 121 GNLGLFPGAALLVSHDFCLPGGRYLPHGLGEGQPLRLGPGLEVWATPGHGGQRDVSVVVA 180
Query: 181 GTALGTVVVAGDVFERDGDEDSWQALSEDPAAQERSRKRVLVVADVVVPGHGPPFRVLRE 240
GTALGTVVVAGDVFERDGDEDSWQALSEDPAAQERSRKRVLVVADVVVPGHGPPFRVLRE
Sbjct: 181 GTALGTVVVAGDVFERDGDEDSWQALSEDPAAQERSRKRVLVVADVVVPGHGPPFRVLRE 240
Query: 241 ASQPETEGGGNSQQEPVVGDEEPALH 266
ASQPETEGGGNSQQEPVVGDEEPALH
Sbjct: 241 ASQPETEGGGNSQQEPVVGDEEPALH 266
>gi|7705793 lactamase, beta 2 [Homo sapiens]
Length = 288
Score = 37.7 bits (86), Expect = 0.010
Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 41/177 (23%)
Query: 80 ILVDTGGPWARE---ALLGALAGQGVAPGDVTLVVGTHGHSDHIGNLGLFPGAALLVSHD 136
IL+DTG P E L AL A + +V TH H DH G +G +++D
Sbjct: 43 ILIDTGEPAIPEYISCLKQALTEFNTA---IQEIVVTHWHRDHSGGIG---DICKSINND 96
Query: 137 --FCLPGGRYLPH--------GLGEGQPLRLGPG---------LEVWATPGHGGQRDVSV 177
+C+ + LP G GE Q + L G L V TPGH +
Sbjct: 97 TTYCI---KKLPRNPQREEIIGNGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALL 153
Query: 178 VVAGTALGTVVVAGDVFERDGDEDSWQALSEDPAAQERSRKRVLVV-ADVVVPGHGP 233
+ A + +GD +G + ED S K +L + AD++ PGHGP
Sbjct: 154 LEEENA----IFSGDCILGEGT-----TVFEDLYDYMNSLKELLKIKADIIYPGHGP 201
>gi|153791158 keratin 75 [Homo sapiens]
Length = 551
Score = 33.1 bits (74), Expect = 0.26
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 17/81 (20%)
Query: 97 LAGQGVAPGDVTLVVGT------HGHSDHIGNLGLFPGAALLVSHDFCLPGGRYLPHGLG 150
L+G+GV+P ++++V T G S GNLGL G+ + F GG L GLG
Sbjct: 462 LSGEGVSPVNISVVTSTLSSGYGSGSSIGGGNLGLGGGS----GYSFTTSGGHSLGAGLG 517
Query: 151 EGQPLRLGPGLEVWATPGHGG 171
G G + G GG
Sbjct: 518 -------GSGFSATSNRGLGG 531
>gi|41327741 ETHE1 protein [Homo sapiens]
Length = 254
Score = 32.7 bits (73), Expect = 0.34
Identities = 40/127 (31%), Positives = 53/127 (41%), Gaps = 23/127 (18%)
Query: 61 SPRGSGGAEAALEEAARGPILVDT---GGPWAREALLGALAGQGVAPGDVTLV------- 110
S RG GA L + T G +REA+L + AP D L+
Sbjct: 14 SQRGGSGAPILLRQMFEPVSCTFTYLLGDRESREAVLIDPVLE-TAPRDAQLIKELGLRL 72
Query: 111 ---VGTHGHSDHIGNLG----LFPGAALLVSHDFCLPGGRYLPHGLGEGQPLRLGP-GLE 162
V TH H+DHI G L PG ++S L G + H + +G +R G LE
Sbjct: 73 LYAVNTHCHADHITGSGLLRSLLPGCQSVISR---LSGAQADLH-IEDGDSIRFGRFALE 128
Query: 163 VWATPGH 169
A+PGH
Sbjct: 129 TRASPGH 135
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 32.3 bits (72), Expect = 0.44
Identities = 47/179 (26%), Positives = 67/179 (37%), Gaps = 39/179 (21%)
Query: 2 RTEPLCGASPLLVPGDPYSVVVLLQGYAEPEGVGDAVRADGSVTLVLPQTRGPASSHRES 61
+ +P+C P L L G AE VG A G+V+ P P SS RE
Sbjct: 423 KMDPMCSGKPEL----------LSPGQAERVSVGKA----GTVS---PGKEDPVSSRRED 465
Query: 62 PRGSGGAEAALEEA---ARGPILVDTGGPWAREALLGALAGQGVAPGDVTLVVGTHGHSD 118
P +G + + E+ + G + GP +L G P V T G D
Sbjct: 466 PISAGSRKTSSEKVNPESSGKTNPVSSGPGDPRSL-----GTAGPPSAVKAEPATGGKGD 520
Query: 119 HIGNLGLFPGAALLVSHDFCLPGGRYLPHGLGEGQPLRLG---PGLEVWATPGHGGQRD 174
+ + A L+ S G+ P G+ +PL +G P + A G GQ D
Sbjct: 521 PLSS----EKAGLVAS-------GKAAPTASGKAEPLAVGKEDPVSKGKADAGPSGQGD 568
>gi|47419907 T-box 3 protein isoform 2 [Homo sapiens]
Length = 743
Score = 32.0 bits (71), Expect = 0.58
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 43 SVTLVLPQTRGPASSHRESPRGSGGAEAALEEA-------ARGPILVDTGGPWAREALLG 95
S + TRG + R SP G A A +EEA A P+ V T A A G
Sbjct: 438 SPATISSSTRGLGAEERRSPVREGTAPAKVEEARALPGKEAFAPLTVQTDAAAAHLA-QG 496
Query: 96 ALAGQGVAPG 105
L G G APG
Sbjct: 497 PLPGLGFAPG 506
>gi|47419905 T-box 3 protein isoform 1 [Homo sapiens]
Length = 723
Score = 32.0 bits (71), Expect = 0.58
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 43 SVTLVLPQTRGPASSHRESPRGSGGAEAALEEA-------ARGPILVDTGGPWAREALLG 95
S + TRG + R SP G A A +EEA A P+ V T A A G
Sbjct: 418 SPATISSSTRGLGAEERRSPVREGTAPAKVEEARALPGKEAFAPLTVQTDAAAAHLA-QG 476
Query: 96 ALAGQGVAPG 105
L G G APG
Sbjct: 477 PLPGLGFAPG 486
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 31.6 bits (70), Expect = 0.75
Identities = 24/61 (39%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 29 AEPEGVGDAVRADGSVTLVL---PQTRGPASSHRESPRGSGGAEAALEEAARGPILVDTG 85
AEPEGV + V L P G A E P GS GA EEA RG V
Sbjct: 5 AEPEGVAPGPQGPPEVPAPLAERPGEPGAAGGEAEGPEGSEGA----EEAPRGAAAVKEA 60
Query: 86 G 86
G
Sbjct: 61 G 61
>gi|38372909 jumonji domain containing 1B [Homo sapiens]
Length = 1761
Score = 31.2 bits (69), Expect = 0.98
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 168 GHGGQRDVSVVVAGTALGTVVVAGDVFERDGDEDSWQALSEDPAAQERSRKRVLVVADVV 227
G G +VV ++ V D G Q S A+ E SR +L +
Sbjct: 414 GQGIVASAAVVTTASSTPNTVRISDTGLAAGTVPEKQKGSRSQASGENSRNSILASS--- 470
Query: 228 VPGHGPPFRVLREASQPETEGGGNSQQEPVVGDEEPAL 265
G G P L +SQP T G G SQ V+ E L
Sbjct: 471 --GFGAP---LPSSSQPLTFGSGRSQSNGVLATENKPL 503
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 31.2 bits (69), Expect = 0.98
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 46 LVLPQTRGPASSHRESPRGSGGAEAALEEAARGPILVDTGGPWAREALLGALAGQGVAPG 105
L+ P+ P HR P G GG +GP GP+ R + L G G PG
Sbjct: 853 LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPF--PPHGPFVRPGGMPGLGGPGPGPG 910
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 31.2 bits (69), Expect = 0.98
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 46 LVLPQTRGPASSHRESPRGSGGAEAALEEAARGPILVDTGGPWAREALLGALAGQGVAPG 105
L+ P+ P HR P G GG +GP GP+ R + L G G PG
Sbjct: 860 LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPF--PPHGPFVRPGGMPGLGGPGPGPG 917
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 31.2 bits (69), Expect = 0.98
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 46 LVLPQTRGPASSHRESPRGSGGAEAALEEAARGPILVDTGGPWAREALLGALAGQGVAPG 105
L+ P+ P HR P G GG +GP GP+ R + L G G PG
Sbjct: 875 LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPF--PPHGPFVRPGGMPGLGGPGPGPG 932
>gi|149944548 neurobeachin-like 2 [Homo sapiens]
Length = 2754
Score = 30.8 bits (68), Expect = 1.3
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 206 LSEDPAAQERSRKRV-LVVADVVVPGHGPP-FRVLREASQPETEGGGNSQQEPVVGDEEP 263
+S+ P+A+E ++R+ V+ HGPP R+L+E EG + P + +E+P
Sbjct: 392 MSDSPSAKEVFKERIGYPHLQEVLQSHGPPTHRLLQELLNMAVEGDHSMCPPPPIRNEQP 451
Query: 264 AL 265
L
Sbjct: 452 VL 453
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 30.4 bits (67), Expect = 1.7
Identities = 43/154 (27%), Positives = 53/154 (34%), Gaps = 30/154 (19%)
Query: 53 GPASSHRESPRGSGGAEAALEEAARGPILVDTGGPWAREALLGALAG------------- 99
GP ++ + GS A A + GP GP A LGA G
Sbjct: 321 GPPTASVFAGAGSAPAPAPASGSGPGP------GPAGLPAFLGAELGCAKAFYAASLSPP 374
Query: 100 -QGVAPGDVTLVVGTHGHSDHIGNLGLFPGAA-----LLVSHDFCLPGGRYLPHGLGEGQ 153
G A G T ++ +D G G A + H GG P G GEG
Sbjct: 375 AAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGS 434
Query: 154 PLRLGPGLEVWATPGHGGQRDVSVVVAGTALGTV 187
P GP A G GGQ V ++ AL V
Sbjct: 435 P---GPPFA--AAAGPGGQAQVLAMLTAPALAPV 463
>gi|58743323 XK, Kell blood group complex subunit-related family,
member 7 [Homo sapiens]
Length = 579
Score = 30.4 bits (67), Expect = 1.7
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 37 AVRADGSVTLVLPQTRGPASSHRESPRGSGGAEAALEEAARGPILVDTGGPWAREAL 93
A ++DG+ P G A R S G G A A AA P +V GGP R L
Sbjct: 2 AAKSDGAAASASPDPEGAAGGARGSAGGRGEAAA----AAGPPGVVGAGGPGPRYEL 54
>gi|8923582 zinc finger protein 446 [Homo sapiens]
Length = 450
Score = 30.0 bits (66), Expect = 2.2
Identities = 31/112 (27%), Positives = 40/112 (35%), Gaps = 13/112 (11%)
Query: 15 PGDPYSVVVLLQGYAEPEGVGDAVRADGSVTL-VLPQTRGPASSHRESPRGSGGAEAALE 73
PG P L++G G + G +T VL Q PA+ E P GS +E
Sbjct: 91 PGSPEEAAALVEGLQHDPG-----QLLGWITAHVLKQEVLPAAQKTEEPLGSPHPSGTVE 145
Query: 74 EAARGPILVDTGGPWAREALLGA---LAGQGVAPGDVTLVV----GTHGHSD 118
GP G + + GQ VAP L G HGH +
Sbjct: 146 SPGEGPQDTRIEGSVQLSCSVKEEPNVDGQEVAPSSPPLAAQSPEGNHGHQE 197
>gi|5454102 transforming, acidic coiled-coil containing protein 3
[Homo sapiens]
Length = 838
Score = 29.6 bits (65), Expect = 2.9
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 10/52 (19%)
Query: 7 CGASPLL-VPGDPYSVVVLLQGYAEPEGVGDAVRADGSVTLVLPQTRGPASS 57
CG +PL +PG+ P GVG V ADG+ TL T P S+
Sbjct: 260 CGGAPLQGLPGEALGC---------PAGVGTPVPADGTQTLTCAHTSAPEST 302
>gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens]
Length = 920
Score = 29.6 bits (65), Expect = 2.9
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 51 TRGPASSHRESPR---GSGGAEAALEEAARGPILVDTG--GPWAREALLGALAGQGVAP 104
T+ P+S H SP+ G GG L A +L G G AR+ GA A +AP
Sbjct: 670 TKPPSSEHFPSPQGGGGGGGGGGGLHVAIPDSVLTPPGADGAAARKTQFGASATAALAP 728
>gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens]
Length = 901
Score = 29.6 bits (65), Expect = 2.9
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 51 TRGPASSHRESPR---GSGGAEAALEEAARGPILVDTG--GPWAREALLGALAGQGVAP 104
T+ P+S H SP+ G GG L A +L G G AR+ GA A +AP
Sbjct: 651 TKPPSSEHFPSPQGGGGGGGGGGGLHVAIPDSVLTPPGADGAAARKTQFGASATAALAP 709
>gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 29.3 bits (64), Expect = 3.7
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Query: 39 RADGSVTLVLPQTRGPASSHRESPRGSGGAEAALEEAARGPILVDTGGPWAREALLGALA 98
RA G T V + S +P G+G E LEEA G D G W +
Sbjct: 33 RAPGPTTQVALEQ---GSDPHAAPGGAGSGEGGLEEAGVGVSASDEAGIWMQGHSWRQRT 89
Query: 99 GQGVAPGDVTLVVGTHGHSDHIGNLGLFPG 128
+ + P ++ +HG + H+ G G
Sbjct: 90 FKELLPLKCQ-ILSSHGCAGHLQGSGFHSG 118
>gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo
sapiens]
Length = 1977
Score = 29.3 bits (64), Expect = 3.7
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 4 EPLCGASPLLVPGDPYSVVVLLQGYAEPEGVGDAVRADGSVTLVLPQTRGPASSHRESPR 63
+P+ SP+ P P S +++QG + P+G + VT VL + S+++E+P
Sbjct: 1093 QPMKPISPVKDPVSPASQKMVIQGPSSPQG-------EAMVTDVLEDQKEGRSTNKENP- 1144
Query: 64 GSGGAEAALEEAARGPILVDT 84
++A +E ++ I + T
Sbjct: 1145 ----SKALIERPSQNNIGIQT 1161
>gi|213972634 tumor protein p53 binding protein 1 isoform 2 [Homo
sapiens]
Length = 1975
Score = 29.3 bits (64), Expect = 3.7
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 4 EPLCGASPLLVPGDPYSVVVLLQGYAEPEGVGDAVRADGSVTLVLPQTRGPASSHRESPR 63
+P+ SP+ P P S +++QG + P+G + VT VL + S+++E+P
Sbjct: 1093 QPMKPISPVKDPVSPASQKMVIQGPSSPQG-------EAMVTDVLEDQKEGRSTNKENP- 1144
Query: 64 GSGGAEAALEEAARGPILVDT 84
++A +E ++ I + T
Sbjct: 1145 ----SKALIERPSQNNIGIQT 1161
>gi|5032189 tumor protein p53 binding protein 1 isoform 3 [Homo
sapiens]
Length = 1972
Score = 29.3 bits (64), Expect = 3.7
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 4 EPLCGASPLLVPGDPYSVVVLLQGYAEPEGVGDAVRADGSVTLVLPQTRGPASSHRESPR 63
+P+ SP+ P P S +++QG + P+G + VT VL + S+++E+P
Sbjct: 1088 QPMKPISPVKDPVSPASQKMVIQGPSSPQG-------EAMVTDVLEDQKEGRSTNKENP- 1139
Query: 64 GSGGAEAALEEAARGPILVDT 84
++A +E ++ I + T
Sbjct: 1140 ----SKALIERPSQNNIGIQT 1156
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 29.3 bits (64), Expect = 3.7
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 44 VTLVLPQTRGPASSHRESPRGSGGAEAALEEAARGPILVDTGGPWAREALLGALAGQGVA 103
V +V PQ H E P GG A E+ + G + GP R+A A + + A
Sbjct: 121 VYMVQPQGCSDEEDHAEEPSKDGG--ALEEKDSDGAASKEDSGPSTRQASGEASSLRDYA 178
Query: 104 PGDVTLVVGTHGHSD 118
+T +G G+ D
Sbjct: 179 ASTMTEFLGMFGYDD 193
>gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens]
Length = 1166
Score = 29.3 bits (64), Expect = 3.7
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 44 VTLVLPQTRGPASSHRESPRGSGGAEAALEEAARGPILVDTGGPWAREALLGALAGQGVA 103
V +V PQ H E P GG A E+ + G + GP R+A A + + A
Sbjct: 121 VYMVQPQGCSDEEDHAEEPSKDGG--ALEEKDSDGAASKEDSGPSTRQASGEASSLRDYA 178
Query: 104 PGDVTLVVGTHGHSD 118
+T +G G+ D
Sbjct: 179 ASTMTEFLGMFGYDD 193
>gi|187761351 growth factor independent 1 [Homo sapiens]
Length = 422
Score = 29.3 bits (64), Expect = 3.7
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 3/101 (2%)
Query: 101 GVAPGDVTLVVGTH---GHSDHIGNLGLFPGAALLVSHDFCLPGGRYLPHGLGEGQPLRL 157
G+A D+ +V ++ G + LGLF A H L G + G G G P
Sbjct: 126 GLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAGAPGSC 185
Query: 158 GPGLEVWATPGHGGQRDVSVVVAGTALGTVVVAGDVFERDG 198
G A PG G D AG AG ++ G
Sbjct: 186 SAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERG 226
>gi|187761349 growth factor independent 1 [Homo sapiens]
Length = 422
Score = 29.3 bits (64), Expect = 3.7
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 3/101 (2%)
Query: 101 GVAPGDVTLVVGTH---GHSDHIGNLGLFPGAALLVSHDFCLPGGRYLPHGLGEGQPLRL 157
G+A D+ +V ++ G + LGLF A H L G + G G G P
Sbjct: 126 GLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAGAPGSC 185
Query: 158 GPGLEVWATPGHGGQRDVSVVVAGTALGTVVVAGDVFERDG 198
G A PG G D AG AG ++ G
Sbjct: 186 SAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERG 226
>gi|71037377 growth factor independent 1 [Homo sapiens]
Length = 422
Score = 29.3 bits (64), Expect = 3.7
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 3/101 (2%)
Query: 101 GVAPGDVTLVVGTH---GHSDHIGNLGLFPGAALLVSHDFCLPGGRYLPHGLGEGQPLRL 157
G+A D+ +V ++ G + LGLF A H L G + G G G P
Sbjct: 126 GLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAGAPGSC 185
Query: 158 GPGLEVWATPGHGGQRDVSVVVAGTALGTVVVAGDVFERDG 198
G A PG G D AG AG ++ G
Sbjct: 186 SAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERG 226
>gi|239756776 PREDICTED: similar to transformation related protein
53 inducible protein 13 [Homo sapiens]
Length = 169
Score = 28.9 bits (63), Expect = 4.9
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 154 PLRLGPGLEVWATPGHGGQRDVSVVVA--GTALGTVVVAGDVFERDGDEDSWQALSE--- 208
P RL PG + WAT D VV A G VAG+ R GD + +
Sbjct: 94 PERLQPGADQWATVVAAAMEDDRVVAALQGEQAKAEHVAGEATPRIGDHQKHRRKAPGAG 153
Query: 209 DPAA 212
DPAA
Sbjct: 154 DPAA 157
>gi|239751263 PREDICTED: hypothetical protein XP_002347773 [Homo
sapiens]
Length = 169
Score = 28.9 bits (63), Expect = 4.9
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 154 PLRLGPGLEVWATPGHGGQRDVSVVVA--GTALGTVVVAGDVFERDGDEDSWQALSE--- 208
P RL PG + WAT D VV A G VAG+ R GD + +
Sbjct: 94 PERLQPGADQWATVVAAAMEDDRVVAALQGEQAKAEHVAGEATPRIGDHQKHRRKAPGAG 153
Query: 209 DPAA 212
DPAA
Sbjct: 154 DPAA 157
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.138 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,437,495
Number of Sequences: 37866
Number of extensions: 760524
Number of successful extensions: 1571
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 1546
Number of HSP's gapped (non-prelim): 62
length of query: 266
length of database: 18,247,518
effective HSP length: 100
effective length of query: 166
effective length of database: 14,460,918
effective search space: 2400512388
effective search space used: 2400512388
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.