Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MBLAC1 Sequence: fasta or formatted (266aa) NCBI GI: 63025212
Description:

metallo-beta-lactamase domain containing 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         27           2
 C cysteine            0.8          2           1
 D aspartate           5.6         15           1
 E glutamate           7.5         20           2
 F phenylalanine       1.5          4           1
 G glycine            15.8         42           3
 H histidine           3.4          9           1
 I isoleucine          0.8          2           1
 K lysine              0.4          1           1
 L leucine            10.5         28           2
 M methionine          0.4          1           1
 N asparagine          0.8          2           1
 P proline             9.0         24           2
 Q glutamine           3.8         10           2
 R arginine            6.0         16           1
 S serine              5.6         15           2
 T threonine           3.8         10           1
 V valine             12.0         32           3
 W tryptophan          1.1          3           1
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metallo-beta-lactamase domain containing 1 
LACTB2                0.025   lactamase, beta 2 
KRT75                 0.015   keratin 75 
ETHE1                 0.015   ETHE1 protein 
GPRIN1                0.014   G protein-regulated inducer of neurite outgrowth 1 ...
TBX3                  0.014   T-box 3 protein isoform 2 
TBX3                  0.014   T-box 3 protein isoform 1 
CLIC6                 0.014   chloride intracellular channel 6 
KDM3B                 0.012   jumonji domain containing 1B 
SFRS15                0.012   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.012   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.012   splicing factor, arginine/serine-rich 15 isoform 1 [...
NBEAL2                0.012   neurobeachin-like 2 
FOXD2                 0.010   forkhead box D2 
XKR7                  0.010   XK, Kell blood group complex subunit-related family,...
ZNF446                0.010   zinc finger protein 446 
TACC3                 0.010   transforming, acidic coiled-coil containing protein 3...
NPAS3                 0.010   neuronal PAS domain protein 3 isoform 2 
NPAS3                 0.010   neuronal PAS domain protein 3 isoform 1 
LOC100292196          0.008   PREDICTED: hypothetical protein 
TP53BP1               0.008   tumor protein p53 binding protein 1 isoform 1 [Homo...
TP53BP1               0.008   tumor protein p53 binding protein 1 isoform 2 [Homo...
TP53BP1               0.008   tumor protein p53 binding protein 1 isoform 3 
CASZ1                 0.008   castor homolog 1, zinc finger isoform a 
CASZ1                 0.008   castor homolog 1, zinc finger isoform b 
GFI1                  0.008   growth factor independent 1 
GFI1                  0.008   growth factor independent 1 
GFI1                  0.008   growth factor independent 1 
LOC100292894          0.008   PREDICTED: similar to transformation related protei...
LOC100291545          0.008   PREDICTED: hypothetical protein XP_002347773 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press