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Search of human proteins with 13569903
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13569903 ring finger protein 32 [Homo sapiens]
(362 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13569903 ring finger protein 32 [Homo sapiens] 750 0.0
gi|34577087 ring finger protein 13 [Homo sapiens] 47 2e-05
gi|6005864 ring finger protein 13 [Homo sapiens] 47 2e-05
gi|33859668 Rabring 7 [Homo sapiens] 47 3e-05
gi|7706039 ring finger protein 181 [Homo sapiens] 45 8e-05
gi|14149702 ring finger protein 167 [Homo sapiens] 45 1e-04
gi|109134327 PTD016 protein [Homo sapiens] 43 5e-04
gi|37622894 ring finger protein 126 [Homo sapiens] 42 7e-04
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens] 42 0.001
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens] 42 0.001
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 41 0.001
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 41 0.001
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 41 0.001
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 41 0.001
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 41 0.001
gi|150170725 zinc and ring finger 4 [Homo sapiens] 41 0.001
gi|29788758 ring finger protein 130 [Homo sapiens] 41 0.001
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 41 0.002
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 41 0.002
gi|156564386 deltex 2 isoform b [Homo sapiens] 41 0.002
gi|156564384 deltex 2 isoform a [Homo sapiens] 41 0.002
gi|156564382 deltex 2 isoform a [Homo sapiens] 41 0.002
gi|156564380 deltex 2 isoform a [Homo sapiens] 41 0.002
gi|148237498 deltex 4 homolog [Homo sapiens] 41 0.002
gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens] 41 0.002
gi|231573214 zinc finger protein 294 [Homo sapiens] 40 0.002
gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens] 40 0.002
gi|58331204 ring finger protein 150 [Homo sapiens] 40 0.002
gi|87241872 ring finger protein 151 [Homo sapiens] 40 0.002
gi|29789407 ring finger protein 149 [Homo sapiens] 40 0.003
>gi|13569903 ring finger protein 32 [Homo sapiens]
Length = 362
Score = 750 bits (1937), Expect = 0.0
Identities = 362/362 (100%), Positives = 362/362 (100%)
Query: 1 MLKNKGHSSKKDNLAVNAVALQDHILHDLQLRNLSVADHSKTQVQKKENKSLKRDTKAII 60
MLKNKGHSSKKDNLAVNAVALQDHILHDLQLRNLSVADHSKTQVQKKENKSLKRDTKAII
Sbjct: 1 MLKNKGHSSKKDNLAVNAVALQDHILHDLQLRNLSVADHSKTQVQKKENKSLKRDTKAII 60
Query: 61 DTGLKKTTQCPKLEDSEKEYVLDPKPPPLTLAQKLGLIGPPPPPLSSDEWEKVKQRSLLQ 120
DTGLKKTTQCPKLEDSEKEYVLDPKPPPLTLAQKLGLIGPPPPPLSSDEWEKVKQRSLLQ
Sbjct: 61 DTGLKKTTQCPKLEDSEKEYVLDPKPPPLTLAQKLGLIGPPPPPLSSDEWEKVKQRSLLQ 120
Query: 121 GDSVQPCPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCRKNQYQTRVIHD 180
GDSVQPCPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCRKNQYQTRVIHD
Sbjct: 121 GDSVQPCPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCRKNQYQTRVIHD 180
Query: 181 GARLFRIKCVTRIQAYWRGCVVRKWYRNLRKTVPPTDAKLRKKFFEKKFTEISHRILCSY 240
GARLFRIKCVTRIQAYWRGCVVRKWYRNLRKTVPPTDAKLRKKFFEKKFTEISHRILCSY
Sbjct: 181 GARLFRIKCVTRIQAYWRGCVVRKWYRNLRKTVPPTDAKLRKKFFEKKFTEISHRILCSY 240
Query: 241 NTNIEELFAEIDQCLAINRSVLQQLEEKCGHEITEEEWEKIQVQALRRETHECSICLAPL 300
NTNIEELFAEIDQCLAINRSVLQQLEEKCGHEITEEEWEKIQVQALRRETHECSICLAPL
Sbjct: 241 NTNIEELFAEIDQCLAINRSVLQQLEEKCGHEITEEEWEKIQVQALRRETHECSICLAPL 300
Query: 301 SAAGGQRVGAGRRSREMALLSCSHVFHHACLLALEEFSVGDRPPFHACPLCRSCYQKKIL 360
SAAGGQRVGAGRRSREMALLSCSHVFHHACLLALEEFSVGDRPPFHACPLCRSCYQKKIL
Sbjct: 301 SAAGGQRVGAGRRSREMALLSCSHVFHHACLLALEEFSVGDRPPFHACPLCRSCYQKKIL 360
Query: 361 EC 362
EC
Sbjct: 361 EC 362
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 47.4 bits (111), Expect = 2e-05
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 105 LSSDEWEKVKQRSLLQGDSVQPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKK 163
L D+ +K+ +GD C IC +E+E ++ +L CSH +H C+ + T KK
Sbjct: 218 LRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT-KK 276
Query: 164 TCPLCRK 170
TCP+C++
Sbjct: 277 TCPVCKQ 283
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 47.4 bits (111), Expect = 2e-05
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 105 LSSDEWEKVKQRSLLQGDSVQPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKK 163
L D+ +K+ +GD C IC +E+E ++ +L CSH +H C+ + T KK
Sbjct: 218 LRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT-KK 276
Query: 164 TCPLCRK 170
TCP+C++
Sbjct: 277 TCPVCKQ 283
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 46.6 bits (109), Expect = 3e-05
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 102 PPPLSSDEWEKVKQRSLLQG--DSVQPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEK 158
PPP ++ + ++ Q D CP+CKE++ + +V L C+H FH +C+ + +
Sbjct: 201 PPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE 260
Query: 159 FTNKKTCPLCRKN 171
+ TCP+CRK+
Sbjct: 261 LHD--TCPVCRKS 271
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 45.4 bits (106), Expect = 8e-05
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 102 PPPLSSDEWEKVKQRSLLQGDSVQ-PCPICKEEFELRPQVL-LSCSHVFHKACLQAFEKF 159
PPP + E + R++++G + CP+C EFE + + C H+FH +C+ +
Sbjct: 51 PPPAAKTVVENLP-RTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSK 109
Query: 160 TNKKTCPLCR 169
TN +CPLCR
Sbjct: 110 TN--SCPLCR 117
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 44.7 bits (104), Expect = 1e-04
Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 105 LSSDEWEKVKQRSLLQGDSVQPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKK 163
L+ ++ +++ +GD C IC +E+E ++ +L C+H +H C+ + T +K
Sbjct: 208 LTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT-RK 266
Query: 164 TCPLCRK 170
TCP+C++
Sbjct: 267 TCPICKQ 273
>gi|109134327 PTD016 protein [Homo sapiens]
Length = 435
Score = 42.7 bits (99), Expect = 5e-04
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 127 CPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCR 169
C IC+ EF+ +LL C H+F + C+ + F +KTCPLCR
Sbjct: 375 CSICQAEFQ--KPILLICQHIFCEECMTLW--FNREKTCPLCR 413
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 42.4 bits (98), Expect = 7e-04
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 102 PPPLSSDEWEKVKQRSLLQ---GDSVQPCPICKEEFELRPQVL-LSCSHVFHKACLQAFE 157
PPP ++ + + + + G ++ CP+CK+++ L +V L C+H+FH C+ +
Sbjct: 202 PPPADKEKIQALPTVPVTEEHVGSGLE-CPVCKDDYALGERVRQLPCNHLFHDGCIVPW- 259
Query: 158 KFTNKKTCPLCRKN 171
+CP+CRK+
Sbjct: 260 -LEQHDSCPVCRKS 272
>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 41.6 bits (96), Expect = 0.001
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 52 LKRDTKAIIDTGLKKTTQCPKLEDSEKEYVLDPKPPPLTLAQ-KLGLIGPPPPPLSSDEW 110
++R T+ I+D KK P ++ Y P +Q ++ P P +
Sbjct: 1887 VQRVTEHILDEQKKKK---PNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKA 1943
Query: 111 EKVKQRSLLQGDSVQPCPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCR 169
E V R L S C IC E F+ + +L C H +HK C + + K + CP C+
Sbjct: 1944 EDVPVRIALGASS---CEICHEVFKSKNVRVLKCGHKYHKGCFKQWLK--GQSACPACQ 1997
>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 41.6 bits (96), Expect = 0.001
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 52 LKRDTKAIIDTGLKKTTQCPKLEDSEKEYVLDPKPPPLTLAQ-KLGLIGPPPPPLSSDEW 110
++R T+ I+D KK P ++ Y P +Q ++ P P +
Sbjct: 1887 VQRVTEHILDEQKKKK---PNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKA 1943
Query: 111 EKVKQRSLLQGDSVQPCPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCR 169
E V R L S C IC E F+ + +L C H +HK C + + K + CP C+
Sbjct: 1944 EDVPVRIALGASS---CEICHEVFKSKNVRVLKCGHKYHKGCFKQWLK--GQSACPACQ 1997
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Query: 112 KVKQRSLLQGDSV-----QPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKKTC 165
+++ R+L QGD C +C E ++ V +L+C+H+FHK C+ + +TC
Sbjct: 257 RLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPW--LLEHRTC 314
Query: 166 PLCR 169
P+C+
Sbjct: 315 PMCK 318
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Query: 112 KVKQRSLLQGDSV-----QPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKKTC 165
+++ R+L QGD C +C E ++ V +L+C+H+FHK C+ + +TC
Sbjct: 231 RLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPW--LLEHRTC 288
Query: 166 PLCR 169
P+C+
Sbjct: 289 PMCK 292
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 41.2 bits (95), Expect = 0.001
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 111 EKVKQRSLLQGDSVQPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKKTCPLCR 169
EKVK+ +L + C +C E+F+ R ++ + C H FH+ CL + +K CPLC
Sbjct: 88 EKVKELNLHE-----LCAVCLEDFKPRDELGICPCKHAFHRKCL--IKWLEVRKVCPLCN 140
Query: 170 KNQYQTRVIH 179
Q +H
Sbjct: 141 MPVLQLAQLH 150
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 41.2 bits (95), Expect = 0.001
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 111 EKVKQRSLLQGDSVQPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKKTCPLCR 169
EKVK+ +L + C +C E+F+ R ++ + C H FH+ CL + +K CPLC
Sbjct: 67 EKVKELNLHE-----LCAVCLEDFKPRDELGICPCKHAFHRKCL--IKWLEVRKVCPLCN 119
Query: 170 KNQYQTRVIH 179
Q +H
Sbjct: 120 MPVLQLAQLH 129
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 41.2 bits (95), Expect = 0.001
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 111 EKVKQRSLLQGDSVQPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKKTCPLCR 169
EKVK+ +L + C +C E+F+ R ++ + C H FH+ CL + +K CPLC
Sbjct: 67 EKVKELNLHE-----LCAVCLEDFKPRDELGICPCKHAFHRKCL--IKWLEVRKVCPLCN 119
Query: 170 KNQYQTRVIH 179
Q +H
Sbjct: 120 MPVLQLAQLH 129
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 41.2 bits (95), Expect = 0.001
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 104 PLSSDEWEKVKQRSLLQGDSVQPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNK 162
P+ + +K + R+ + + C IC +E+E Q+ +L CSH +H C+ + +
Sbjct: 288 PVKTSTCQKAQVRTFTWHNDL--CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPR 345
Query: 163 KTCPLCRKN 171
++CP+C+++
Sbjct: 346 RSCPVCKQS 354
Score = 29.6 bits (65), Expect = 4.4
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 18/86 (20%)
Query: 269 CGHE--ITEEEWEKIQVQALRRETHECSICLAPLSAAGGQRVGAGRRSREMALLSCSHVF 326
C H + +K QV+ C+ICL ++ +L CSH +
Sbjct: 283 CSHRRPVKTSTCQKAQVRTFTWHNDLCAICLDEYEEGD-----------QLKILPCSHTY 331
Query: 327 HHACLLALEEFSVGDRPPFHACPLCR 352
H C+ FS + P +CP+C+
Sbjct: 332 HCKCIDPW--FS---QAPRRSCPVCK 352
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 41.2 bits (95), Expect = 0.001
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 19/101 (18%)
Query: 112 KVKQRSLLQGDS-----VQPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKKTC 165
K+ R++ +GD C +C E ++ V +L C HVFHK+C+ + + TC
Sbjct: 244 KLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPW--LSEHCTC 301
Query: 166 PLCRKNQYQT-----------RVIHDGARLFRIKCVTRIQA 195
P+C+ N + V D RL R + V R A
Sbjct: 302 PMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRRSA 342
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 40.8 bits (94), Expect = 0.002
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 127 CPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCR 169
C IC+EE + L C+H+FH +CL+++ F ++TCP CR
Sbjct: 291 CIICREEMVTGAK-RLPCNHIFHTSCLRSW--FQRQQTCPTCR 330
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 40.8 bits (94), Expect = 0.002
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 127 CPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCR 169
C IC+EE + L C+H+FH +CL+++ F ++TCP CR
Sbjct: 291 CIICREEMVTGAK-RLPCNHIFHTSCLRSW--FQRQQTCPTCR 330
>gi|156564386 deltex 2 isoform b [Homo sapiens]
Length = 575
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 292 ECSICLAPLSAAGGQR-VGAGRRSREMA---LLSCSHVFHHACLLALEEFSVGDRPPFHA 347
+C IC+ LS A G V + +A L CSH FH CLLA+ + G++
Sbjct: 364 DCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLAM--YCNGNKDGSLQ 421
Query: 348 CPLCRSCYQKK 358
CP C++ Y +K
Sbjct: 422 CPSCKTIYGEK 432
Score = 28.9 bits (63), Expect = 7.5
Identities = 27/103 (26%), Positives = 34/103 (33%), Gaps = 21/103 (20%)
Query: 86 PPPLTLAQKLGLIGPPPPPLSSDEWEKVKQRSLLQGDSVQPCPICKEEFE---------- 135
P P + Q L P P P + + + D + C IC E+
Sbjct: 326 PKPSRVQQALAGATPKPEPEPEQVIKNYTEELKVPPD--EDCIICMEKLSTASGYSDVTD 383
Query: 136 ------LRPQVLLSCSHVFHKACLQAFEKFTNKK---TCPLCR 169
L L CSH FH CL A NK CP C+
Sbjct: 384 SKAIGSLAVGHLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCK 426
>gi|156564384 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 292 ECSICLAPLSAAGGQR-VGAGRRSREMA---LLSCSHVFHHACLLALEEFSVGDRPPFHA 347
+C IC+ LS A G V + +A L CSH FH CLLA+ + G++
Sbjct: 411 DCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLAM--YCNGNKDGSLQ 468
Query: 348 CPLCRSCYQKK 358
CP C++ Y +K
Sbjct: 469 CPSCKTIYGEK 479
>gi|156564382 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 292 ECSICLAPLSAAGGQR-VGAGRRSREMA---LLSCSHVFHHACLLALEEFSVGDRPPFHA 347
+C IC+ LS A G V + +A L CSH FH CLLA+ + G++
Sbjct: 411 DCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLAM--YCNGNKDGSLQ 468
Query: 348 CPLCRSCYQKK 358
CP C++ Y +K
Sbjct: 469 CPSCKTIYGEK 479
>gi|156564380 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 292 ECSICLAPLSAAGGQR-VGAGRRSREMA---LLSCSHVFHHACLLALEEFSVGDRPPFHA 347
+C IC+ LS A G V + +A L CSH FH CLLA+ + G++
Sbjct: 411 DCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLAM--YCNGNKDGSLQ 468
Query: 348 CPLCRSCYQKK 358
CP C++ Y +K
Sbjct: 469 CPSCKTIYGEK 479
>gi|148237498 deltex 4 homolog [Homo sapiens]
Length = 619
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 274 TEEEWEKIQVQALRRETHE-CSICLAPLSAAGGQRVGAGRRSREMA--LLSCSHVFHHAC 330
T EE K +Q +R E C+IC+ L+A G + ++ L C HV+H C
Sbjct: 389 TPEEVLKKYLQKVRHPPDEDCTICMERLTAPSGYKGPQPTVKPDLVGKLSRCGHVYHIYC 448
Query: 331 LLALEEFSVGDRPPFHACPLCRSCYQKK 358
L+A+ ++ G++ CP C++ Y K
Sbjct: 449 LVAM--YNNGNKDGSLQCPTCKTIYGVK 474
>gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]
Length = 500
Score = 40.8 bits (94), Expect = 0.002
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 127 CPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKT-CPLCR 169
CP+C + F R ++LSC H F +AC+Q F + K+T CP C+
Sbjct: 41 CPLCNDWF--RDPLMLSCGHNFCEACIQDFWRLQAKETFCPECK 82
>gi|231573214 zinc finger protein 294 [Homo sapiens]
Length = 1812
Score = 40.4 bits (93), Expect = 0.002
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 122 DSVQPCPICKE-----EFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCRK 170
+ V+ C IC + L + +C FH ACL + +NK TCPLCR+
Sbjct: 1756 EGVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRE 1809
>gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens]
Length = 444
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 127 CPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCRKNQYQT-RVIHDGA 182
C IC+ EF R ++L C HVF + CL + ++TCPLCR T R DGA
Sbjct: 384 CAICQAEF--REPLILLCQHVFCEECLCLW--LDRERTCPLCRSVAVDTLRCWKDGA 436
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 40.4 bits (93), Expect = 0.002
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 112 KVKQRSLLQGDS-----VQPCPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKKTC 165
K++ R++ +GD C +C E ++ V +L C H+FHK+C+ + + +TC
Sbjct: 258 KLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPW--LLDHRTC 315
Query: 166 PLCRKN 171
P+C+ N
Sbjct: 316 PMCKMN 321
>gi|87241872 ring finger protein 151 [Homo sapiens]
Length = 245
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 122 DSVQPCPICKEEFELRPQVLLSCSHVFHKACLQAFEKFTNKKTCPLCRKNQYQTRVIH 179
DS C +C L+ L CSH+F K C+ + +KTCP CRK + +V+H
Sbjct: 15 DSNFVCSVCHGV--LKRPARLPCSHIFCKKCILRW--LARQKTCPCCRKEVKRKKVVH 68
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 40.0 bits (92), Expect = 0.003
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 127 CPICKEEFELRPQV-LLSCSHVFHKACLQAFEKFTNKKTCPLCR 169
C +C E F+++ + +L C H+FH+ C+ + + +TCP+C+
Sbjct: 269 CAVCIENFKVKDIIRILPCKHIFHRICIDPW--LLDHRTCPMCK 310
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,214,507
Number of Sequences: 37866
Number of extensions: 824806
Number of successful extensions: 4327
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 4048
Number of HSP's gapped (non-prelim): 462
length of query: 362
length of database: 18,247,518
effective HSP length: 104
effective length of query: 258
effective length of database: 14,309,454
effective search space: 3691839132
effective search space used: 3691839132
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.