Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 13514809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
(660 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... 1349 0.0
gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [... 1349 0.0
gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... 1241 0.0
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ... 446 e-125
gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [... 446 e-125
gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ... 446 e-125
gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens] 328 7e-90
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens] 325 6e-89
gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens] 325 8e-89
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 289 6e-78
gi|21071032 DEAD-box protein abstrakt [Homo sapiens] 288 1e-77
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 277 3e-74
gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap... 272 6e-73
gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens] 268 9e-72
gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens] 268 9e-72
gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapi... 245 1e-64
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap... 230 3e-60
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap... 211 1e-54
gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ... 210 3e-54
gi|7661920 eukaryotic translation initiation factor 4A, isoform ... 209 9e-54
gi|38569503 ATP-dependent RNA helicase ROK1 isoform b [Homo sapi... 206 6e-53
gi|38569505 ATP-dependent RNA helicase ROK1 isoform a [Homo sapi... 206 6e-53
gi|4503529 eukaryotic translation initiation factor 4A isoform 1... 202 8e-52
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s... 202 1e-51
gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo sapi... 187 2e-47
gi|13129006 nucleolar protein GU2 [Homo sapiens] 182 1e-45
gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi... 180 3e-45
gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ... 180 4e-45
gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1... 180 4e-45
gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapi... 178 1e-44
>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 1349 bits (3492), Expect = 0.0
Identities = 660/660 (100%), Positives = 660/660 (100%)
Query: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGW 60
MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGW
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGW 60
Query: 61 SCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSDYDGIGNRERPGFGRFERS 120
SCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSDYDGIGNRERPGFGRFERS
Sbjct: 61 SCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSDYDGIGNRERPGFGRFERS 120
Query: 121 GHSRWCDKSVEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENF 180
GHSRWCDKSVEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENF
Sbjct: 121 GHSRWCDKSVEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENF 180
Query: 181 SDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQI 240
SDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQI
Sbjct: 181 SDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQI 240
Query: 241 YTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 300
YTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG
Sbjct: 241 YTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 300
Query: 301 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 360
GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR
Sbjct: 301 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 360
Query: 361 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV 420
RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV
Sbjct: 361 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV 420
Query: 421 EDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREE 480
EDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREE
Sbjct: 421 EDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREE 480
Query: 481 ALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLAT 540
ALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLAT
Sbjct: 481 ALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLAT 540
Query: 541 SFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDY 600
SFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDY
Sbjct: 541 SFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDY 600
Query: 601 RQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN 660
RQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
Sbjct: 601 RQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN 660
>gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 1349 bits (3492), Expect = 0.0
Identities = 660/660 (100%), Positives = 660/660 (100%)
Query: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGW 60
MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGW
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGW 60
Query: 61 SCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSDYDGIGNRERPGFGRFERS 120
SCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSDYDGIGNRERPGFGRFERS
Sbjct: 61 SCSKDKDAYSSFGSRDSRGKPGYFSERGSGSRGRFDDRGRSDYDGIGNRERPGFGRFERS 120
Query: 121 GHSRWCDKSVEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENF 180
GHSRWCDKSVEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENF
Sbjct: 121 GHSRWCDKSVEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENF 180
Query: 181 SDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQI 240
SDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQI
Sbjct: 181 SDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQI 240
Query: 241 YTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 300
YTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG
Sbjct: 241 YTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYG 300
Query: 301 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 360
GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR
Sbjct: 301 GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIR 360
Query: 361 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV 420
RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV
Sbjct: 361 RIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWV 420
Query: 421 EDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREE 480
EDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREE
Sbjct: 421 EDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREE 480
Query: 481 ALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLAT 540
ALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLAT
Sbjct: 481 ALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLAT 540
Query: 541 SFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDY 600
SFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDY
Sbjct: 541 SFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDY 600
Query: 601 RQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN 660
RQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
Sbjct: 601 RQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN 660
>gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo
sapiens]
Length = 662
Score = 1241 bits (3210), Expect = 0.0
Identities = 608/662 (91%), Positives = 634/662 (95%), Gaps = 2/662 (0%)
Query: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGW 60
MSHV V+N LDQQ A LDLNS G STASKGRYIPPHLRNREA+KGF+DKDSSGW
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW 60
Query: 61 SCSKDKDAYSSFGSR-DSRGKPGYFSERGSGSRGRFDDRGRSDYDGIGNR-ERPGFGRFE 118
S SKDKDAYSSFGSR DSRGK +FS+RGSGSRGRFDDRGRSDYDGIG+R +R GFG+FE
Sbjct: 61 SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGKFE 120
Query: 119 RSGHSRWCDKSVEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIE 178
R G+SRWCDKS EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATG+NCPPHIE
Sbjct: 121 RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE 180
Query: 179 NFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILS 238
+FSD++MGEIIMGNIELTRYTRPTPVQKHAIPIIK KRDLMACAQTGSGKTAAFLLPILS
Sbjct: 181 SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS 240
Query: 239 QIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV 298
QIY+DGPGEAL+A+KENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
Sbjct: 241 QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV 300
Query: 299 YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ 358
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
Sbjct: 301 YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ 360
Query: 359 IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV 418
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
Sbjct: 361 IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV 420
Query: 419 WVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR 478
WVE+ DKRSFLLD+L ATG DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
Sbjct: 421 WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR 480
Query: 479 EEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGL 538
EEALHQFRSGKSPILVATAVAARGLDISNV+HVINFDLPSDIEEYVHRIGRTGRVGNLGL
Sbjct: 481 EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL 540
Query: 539 ATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGAR 598
ATSFFNE+N+NITKDLLDLLVEAKQEVPSWLENMAYEHHYKG SRGRSKS+RFSGGFGAR
Sbjct: 541 ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR 600
Query: 599 DYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW 658
DYRQSSG+SSS F +SR SSSRSGGGG+G+SRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
Sbjct: 601 DYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW 660
Query: 659 GN 660
GN
Sbjct: 661 GN 662
>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
[Homo sapiens]
Length = 724
Score = 446 bits (1147), Expect = e-125
Identities = 258/539 (47%), Positives = 347/539 (64%), Gaps = 33/539 (6%)
Query: 85 SERGSGSRGRFDDRGRSDYDGIGNRERPGFGR----FERSGHSRWCDKSVEDDWSKPLPP 140
S GSGS R Y G+ G G+ E G + + + P PP
Sbjct: 200 SRSGSGSE-------RGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPP 252
Query: 141 SERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTR 200
+ E +F+ TGINF+KYD I VE +G + PP I F + ++ + + NI YT+
Sbjct: 253 ED--EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTK 310
Query: 201 PTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDG-PGEALKAVKENGRYG 259
TPVQK++IPII RDLMACAQTGSGKTAAFLLPIL+ + DG K ++E
Sbjct: 311 LTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE----- 365
Query: 260 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 319
P +++APTREL QIY EARKFS+ + VR V+YGG +G IR + +GC++L
Sbjct: 366 -----PECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 420
Query: 320 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 379
ATPGRL+D++ + KIGL KYLVLDEADRMLDMGF P++++++ MP K R T+MF
Sbjct: 421 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 480
Query: 380 SATFPKEIQMLARDFL-DEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGS 438
SATFP+EIQ LA +FL Y+F+AVG+VG ++ Q V+ V KR L++IL G
Sbjct: 481 SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIG- 539
Query: 439 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498
D T+VFVETKK AD + FL E + TSIHGDR QR+RE+AL FR GK P+LVAT+V
Sbjct: 540 DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSV 599
Query: 499 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-EKNMNITKDLLDL 557
AARGLDI NV+HVINFDLPS I+EYVHRIGRTGR GN G A SFF+ E + ++ + L+ +
Sbjct: 600 AARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKV 659
Query: 558 LVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGS-SSSGFGASR 615
L +A+Q+VP+WLE +A+ + G S G ++ N F+ + D R+ + +++GF +S+
Sbjct: 660 LTDAQQDVPAWLEEIAFSTYIPGFS-GSTRGNVFA----SVDTRKGKSTLNTAGFSSSQ 713
Score = 30.0 bits (66), Expect = 7.1
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 575 EHHYKGG-SRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFG 633
+H K G + GR+ NR +G RD + G GFG + +R G+ NSR F
Sbjct: 52 DHFMKSGFASGRNFGNRDAGECNKRDNTSTMG----GFGVGKSFGNR----GFSNSR-FE 102
Query: 634 GGGYGGFY 641
G GF+
Sbjct: 103 DGDSSGFW 110
Score = 30.0 bits (66), Expect = 7.1
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 581 GSRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFG---GGGY 637
G+RG S S RF G + +R+SS +RG S R G NS G GG
Sbjct: 92 GNRGFSNS-RFEDGDSSGFWRESSNDCEDNPTRNRGFSKRGGYRDGNNSEASGPYRRGGR 150
Query: 638 GGFYNSDG 645
G F G
Sbjct: 151 GSFRGCRG 158
>gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1
[Homo sapiens]
Length = 724
Score = 446 bits (1147), Expect = e-125
Identities = 258/539 (47%), Positives = 347/539 (64%), Gaps = 33/539 (6%)
Query: 85 SERGSGSRGRFDDRGRSDYDGIGNRERPGFGR----FERSGHSRWCDKSVEDDWSKPLPP 140
S GSGS R Y G+ G G+ E G + + + P PP
Sbjct: 200 SRSGSGSE-------RGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPP 252
Query: 141 SERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTR 200
+ E +F+ TGINF+KYD I VE +G + PP I F + ++ + + NI YT+
Sbjct: 253 ED--EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTK 310
Query: 201 PTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDG-PGEALKAVKENGRYG 259
TPVQK++IPII RDLMACAQTGSGKTAAFLLPIL+ + DG K ++E
Sbjct: 311 LTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE----- 365
Query: 260 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 319
P +++APTREL QIY EARKFS+ + VR V+YGG +G IR + +GC++L
Sbjct: 366 -----PECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 420
Query: 320 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 379
ATPGRL+D++ + KIGL KYLVLDEADRMLDMGF P++++++ MP K R T+MF
Sbjct: 421 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 480
Query: 380 SATFPKEIQMLARDFL-DEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGS 438
SATFP+EIQ LA +FL Y+F+AVG+VG ++ Q V+ V KR L++IL G
Sbjct: 481 SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIG- 539
Query: 439 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498
D T+VFVETKK AD + FL E + TSIHGDR QR+RE+AL FR GK P+LVAT+V
Sbjct: 540 DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSV 599
Query: 499 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-EKNMNITKDLLDL 557
AARGLDI NV+HVINFDLPS I+EYVHRIGRTGR GN G A SFF+ E + ++ + L+ +
Sbjct: 600 AARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKV 659
Query: 558 LVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGS-SSSGFGASR 615
L +A+Q+VP+WLE +A+ + G S G ++ N F+ + D R+ + +++GF +S+
Sbjct: 660 LTDAQQDVPAWLEEIAFSTYIPGFS-GSTRGNVFA----SVDTRKGKSTLNTAGFSSSQ 713
Score = 30.0 bits (66), Expect = 7.1
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 575 EHHYKGG-SRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFG 633
+H K G + GR+ NR +G RD + G GFG + +R G+ NSR F
Sbjct: 52 DHFMKSGFASGRNFGNRDAGECNKRDNTSTMG----GFGVGKSFGNR----GFSNSR-FE 102
Query: 634 GGGYGGFY 641
G GF+
Sbjct: 103 DGDSSGFW 110
Score = 30.0 bits (66), Expect = 7.1
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 581 GSRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFG---GGGY 637
G+RG S S RF G + +R+SS +RG S R G NS G GG
Sbjct: 92 GNRGFSNS-RFEDGDSSGFWRESSNDCEDNPTRNRGFSKRGGYRDGNNSEASGPYRRGGR 150
Query: 638 GGFYNSDG 645
G F G
Sbjct: 151 GSFRGCRG 158
>gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2
[Homo sapiens]
Length = 690
Score = 446 bits (1147), Expect = e-125
Identities = 258/539 (47%), Positives = 347/539 (64%), Gaps = 33/539 (6%)
Query: 85 SERGSGSRGRFDDRGRSDYDGIGNRERPGFGR----FERSGHSRWCDKSVEDDWSKPLPP 140
S GSGS R Y G+ G G+ E G + + + P PP
Sbjct: 166 SRSGSGSE-------RGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPP 218
Query: 141 SERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTR 200
+ E +F+ TGINF+KYD I VE +G + PP I F + ++ + + NI YT+
Sbjct: 219 ED--EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTK 276
Query: 201 PTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDG-PGEALKAVKENGRYG 259
TPVQK++IPII RDLMACAQTGSGKTAAFLLPIL+ + DG K ++E
Sbjct: 277 LTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE----- 331
Query: 260 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 319
P +++APTREL QIY EARKFS+ + VR V+YGG +G IR + +GC++L
Sbjct: 332 -----PECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 386
Query: 320 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 379
ATPGRL+D++ + KIGL KYLVLDEADRMLDMGF P++++++ MP K R T+MF
Sbjct: 387 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 446
Query: 380 SATFPKEIQMLARDFL-DEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGS 438
SATFP+EIQ LA +FL Y+F+AVG+VG ++ Q V+ V KR L++IL G
Sbjct: 447 SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIG- 505
Query: 439 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498
D T+VFVETKK AD + FL E + TSIHGDR QR+RE+AL FR GK P+LVAT+V
Sbjct: 506 DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSV 565
Query: 499 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-EKNMNITKDLLDL 557
AARGLDI NV+HVINFDLPS I+EYVHRIGRTGR GN G A SFF+ E + ++ + L+ +
Sbjct: 566 AARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKV 625
Query: 558 LVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGS-SSSGFGASR 615
L +A+Q+VP+WLE +A+ + G S G ++ N F+ + D R+ + +++GF +S+
Sbjct: 626 LTDAQQDVPAWLEEIAFSTYIPGFS-GSTRGNVFA----SVDTRKGKSTLNTAGFSSSQ 679
Score = 30.0 bits (66), Expect = 7.1
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 575 EHHYKGG-SRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFG 633
+H K G + GR+ NR +G RD + G GFG + +R G+ NSR F
Sbjct: 52 DHFMKSGFASGRNFGNRDAGECNKRDNTSTMG----GFGVGKSFGNR----GFSNSR-FE 102
Query: 634 GGGYGGFY 641
G GF+
Sbjct: 103 DGDSSGFW 110
>gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
Length = 614
Score = 328 bits (842), Expect = 7e-90
Identities = 223/589 (37%), Positives = 313/589 (53%), Gaps = 52/589 (8%)
Query: 82 GYFSERGSGSRGRFDDRGRSDYDGIGNRERPGFGR-FERSGHSRWCDKSVEDDWS-KPLP 139
GY S+R RGR DRG G+R P G+ F G +K V+ W+ LP
Sbjct: 3 GYSSDR---DRGR--DRGFGAPRFGGSRAGPLSGKKFGNPG-----EKLVKKKWNLDELP 52
Query: 140 PSER--LEQELFSGGNTGINFEKYD-DIPVEATGSNCPPHIENFSDIDMGEIIMGNIELT 196
E+ ++ T E Y + G NCP + NF + + +M I
Sbjct: 53 KFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQ 112
Query: 197 RYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENG 256
+T PT +Q P+ D++ AQTGSGKT ++LLP + I +
Sbjct: 113 NFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHI-------------NHQ 159
Query: 257 RYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCH 316
+ R PI LVLAPTRELA Q+ + A ++ R++ +YGGA G QIRDLERG
Sbjct: 160 PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVE 219
Query: 317 LLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHT 376
+ +ATPGRL+D +E GK L YLVLDEADRMLDMGFEPQIR+IV+Q + R T
Sbjct: 220 ICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI----RPDRQT 275
Query: 377 MMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEDLDKRSFLLDILGA 435
+M+SAT+PKE++ LA DFL +YI + +G + S + NI Q V D++K L+ ++
Sbjct: 276 LMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEE 335
Query: 436 TGSD--SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPIL 493
S+ + T+VFVETK+ D L + +G+ IHGD+SQ++R+ L++F+ GK+PIL
Sbjct: 336 IMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPIL 395
Query: 494 VATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKD 553
+AT VA+RGLD+ +V+ VIN+D P+ E+Y+HRIGRT R G A +FF N+ D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 554 LLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQS--SGSSSSGF 611
L+ +L EA Q + L + E G SRGR G +D R+ S GF
Sbjct: 456 LISVLREANQAINPKLLQLV-EDRGSGRSRGRG---------GMKDDRRDRYSAGKRGGF 505
Query: 612 GASRGSSSRSGGGGYGNSRGFGGGGYGGFYNSDGY-----GGNYNSQGV 655
R + G R FG G Y++ Y G N+ S G+
Sbjct: 506 NTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANYTNGSFGSNFVSAGI 554
>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
Length = 729
Score = 325 bits (834), Expect = 6e-89
Identities = 202/508 (39%), Positives = 280/508 (55%), Gaps = 41/508 (8%)
Query: 170 GSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKT 229
G CP + F + + +M + +T PTP+Q P+ RD++ AQTGSGKT
Sbjct: 163 GDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKT 222
Query: 230 AAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSY 289
A+LLP + I + Y R PI LVLAPTRELA Q+ + A +
Sbjct: 223 LAYLLPAIVHI-------------NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGK 269
Query: 290 RSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADR 349
SR++ +YGGA G QIRDLERG + +ATPGRL+D +E GK L C YLVLDEADR
Sbjct: 270 CSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADR 329
Query: 350 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-S 408
MLDMGFEPQIR+IV+Q + R T+M+SAT+PKE++ LA DFL +Y + VG + S
Sbjct: 330 MLDMGFEPQIRKIVDQI----RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELS 385
Query: 409 TSENITQKVVWVEDLDKRSFLLDILGA--TGSDSLTLVFVETKKGADSLEDFLYHEGYAC 466
+ NI Q V + +K L+ ++ ++ T++FVETK+ D L + +G+
Sbjct: 386 ANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPA 445
Query: 467 TSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHR 526
IHGD+SQ +R+ L++FRSGK+PIL+AT VA+RGLD+ +V+ VIN+D P+ E+YVHR
Sbjct: 446 MCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHR 505
Query: 527 IGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRS 586
IGRT R N G A +FF N+ ++L+ +L EA Q + L + GG GRS
Sbjct: 506 IGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGGRS 565
Query: 587 KSNRFSGGFGAR-------DYR----QSSGSSSSGFGASRGSSSRSG---GGGYGNSRGF 632
+ S D R + G S R + R+G G GYG+
Sbjct: 566 RYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSA 625
Query: 633 GGGGYG------GFYNSDGYG-GNYNSQ 653
G G G Y + YG +Y +Q
Sbjct: 626 FGAQAGQYTYGQGTYGAAAYGTSSYTAQ 653
>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
Length = 731
Score = 325 bits (833), Expect = 8e-89
Identities = 200/511 (39%), Positives = 282/511 (55%), Gaps = 45/511 (8%)
Query: 170 GSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKT 229
G CP + F + + +M + +T PTP+Q P+ RD++ AQTGSGKT
Sbjct: 163 GDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKT 222
Query: 230 AAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSY 289
A+LLP + I + Y R PI LVLAPTRELA Q+ + A +
Sbjct: 223 LAYLLPAIVHI-------------NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGK 269
Query: 290 RSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADR 349
SR++ +YGGA G QIRDLERG + +ATPGRL+D +E GK L C YLVLDEADR
Sbjct: 270 CSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADR 329
Query: 350 MLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-S 408
MLDMGFEPQIR+IV+Q + R T+M+SAT+PKE++ LA DFL +Y + VG + S
Sbjct: 330 MLDMGFEPQIRKIVDQ----IRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELS 385
Query: 409 TSENITQKVVWVEDLDKRSFLLDILG--ATGSDSLTLVFVETKKGADSLEDFLYHEGYAC 466
+ NI Q V + +K L+ ++ ++ T++FVETK+ D L + +G+
Sbjct: 386 ANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPA 445
Query: 467 TSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHR 526
IHGD+SQ +R+ L++FRSGK+PIL+AT VA+RGLD+ +V+ VIN+D P+ E+YVHR
Sbjct: 446 MCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHR 505
Query: 527 IGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRS 586
IGRT R N G A +FF N+ ++L+ +L EA Q + L + +H GG G+
Sbjct: 506 IGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLV-DHRGGGGGGGKG 564
Query: 587 KSNRFSGGFGARDYR--------------QSSGSSSSGFGASRGSSSRSG---GGGYGNS 629
+R+ A + + G S R + R+G G GYG+
Sbjct: 565 GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSP 624
Query: 630 RGFGGGGYG------GFYNSDGYG-GNYNSQ 653
G G G Y + YG +Y +Q
Sbjct: 625 NSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 655
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 289 bits (739), Expect = 6e-78
Identities = 170/458 (37%), Positives = 259/458 (56%), Gaps = 22/458 (4%)
Query: 147 ELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQK 206
EL +N + + + G CP I+++ + I+ +++ Y +PTP+Q
Sbjct: 341 ELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 207 HAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPI 266
AIP I RDL+ A+TGSGKT AFLLP+ I ++++E + PI
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ------RSLEEG-------EGPI 447
Query: 267 SLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLV 326
++++ PTRELA+QI +E +KFS +R VYGG I +QI +L+RG ++V TPGR++
Sbjct: 448 AVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMI 507
Query: 327 DMM--ERGKI-GLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATF 383
DM+ G++ L Y+VLDEADRM DMGFEPQ+ RIV D + P R T+MFSATF
Sbjct: 508 DMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV--DNVRPD--RQTVMFSATF 563
Query: 384 PKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTL 443
P+ ++ LAR L + I + VG ++ Q+V+ +E+ K LL++LG +
Sbjct: 564 PRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVI 623
Query: 444 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 503
+FV+ ++ AD L L Y C S+HG Q DR+ ++ F++G +LVAT+VAARGL
Sbjct: 624 IFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
Query: 504 DISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQ 563
D+ ++ V+N+ P+ E+YVHR GRTGR GN G A +F E D++ L +
Sbjct: 684 DVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGT 743
Query: 564 EVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYR 601
VP LE + + +K + K + S GF + ++
Sbjct: 744 AVPPDLEKLWSD--FKDQQKAEGKIIKKSSGFSGKGFK 779
>gi|21071032 DEAD-box protein abstrakt [Homo sapiens]
Length = 622
Score = 288 bits (736), Expect = 1e-77
Identities = 169/439 (38%), Positives = 252/439 (57%), Gaps = 30/439 (6%)
Query: 170 GSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKT 229
G PP I++F ++ I+ ++ PTP+Q IP I RD++ A TGSGKT
Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232
Query: 230 AAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELA------VQIYEE 283
F LP++ ++ + L K G YG L++ P+RELA ++ Y
Sbjct: 233 LVFTLPVI--MFCLEQEKRLPFSKREGPYG--------LIICPSRELARQTHGILEYYCR 282
Query: 284 ARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLV 343
+ +R + GG + +Q+ + G H++VATPGRL+D++++ + LD C+YL
Sbjct: 283 LLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLA 342
Query: 344 LDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAV 403
LDEADRM+DMGFE IR I KG R T++FSAT PK+IQ A+ L + + + V
Sbjct: 343 LDEADRMIDMGFEGDIRTIFSYF----KGQRQTLLFSATMPKKIQNFAKSALVKPVTINV 398
Query: 404 GRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEG 463
GR G+ S ++ Q+V +V++ K +LL+ L T L+F E K D++ ++L +G
Sbjct: 399 GRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPP--VLIFAEKKADVDAIHEYLLLKG 456
Query: 464 YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEY 523
+IHG + Q +R +A+ FR GK +LVAT VA++GLD ++HVIN+D+P +IE Y
Sbjct: 457 VEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENY 516
Query: 524 VHRIGRTGRVGNLGLATSFFNEK-NMNITKDLLDLLVEAKQEVPSWLENMAYEHHYK--- 579
VHRIGRTGR GN G+AT+F N+ + ++ DL LL+EAKQ+VP L+ +
Sbjct: 517 VHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDI 576
Query: 580 GGSRGRSKSNRFSGGFGAR 598
GG RG + F GG G R
Sbjct: 577 GGERGCA----FCGGLGHR 591
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 277 bits (708), Expect = 3e-74
Identities = 167/442 (37%), Positives = 238/442 (53%), Gaps = 33/442 (7%)
Query: 162 DDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMAC 221
+D + G P I ++ D + I+ I+ Y PTP+Q+ AIPI RD++
Sbjct: 375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434
Query: 222 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 281
A+TGSGKTAAFL+P+L I T + + R Q P +++LAPTRELA QI
Sbjct: 435 AETGSGKTAAFLIPLLVWITT---------LPKIDRIEESDQGPYAIILAPTRELAQQIE 485
Query: 282 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 341
EE KF +R V GG Q L GC +++ATPGRL+D++E + L C Y
Sbjct: 486 EETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTY 545
Query: 342 LVLDEADRMLDMGFEPQIRRIVEQDTM------------PPKGV----------RHTMMF 379
+VLDEADRM+DMGFEP +++I+E + P K + R T+MF
Sbjct: 546 VVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMF 605
Query: 380 SATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSD 439
+AT P ++ LAR +L + +G G E + QKV + + +KR LL IL G D
Sbjct: 606 TATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL-EQGFD 664
Query: 440 SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVA 499
++FV KKG D L L GY ++HG + Q RE AL ++G ILVAT VA
Sbjct: 665 PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVA 724
Query: 500 ARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLV 559
RG+DI +V V+N+D+ +IE+Y+HRIGRTGR G G+A +F +++ + +L ++
Sbjct: 725 GRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAIL 784
Query: 560 EAK-QEVPSWLENMAYEHHYKG 580
E+ P L N H G
Sbjct: 785 ESPVSSCPPELANHPDAQHKPG 806
>gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo
sapiens]
Length = 648
Score = 272 bits (696), Expect = 6e-73
Identities = 157/386 (40%), Positives = 229/386 (59%), Gaps = 18/386 (4%)
Query: 189 IMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEA 248
+M NI+ + +PTP+Q A PI+ DL+ AQTG+GKT +L+P +
Sbjct: 253 VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHL-------- 304
Query: 249 LKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQI 308
V + G+R + P LVL PTRELA+Q+ E K+SY+ +R VYGG + +QI
Sbjct: 305 ---VLQPSLKGQRNR-PGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGGGNRDEQI 359
Query: 309 RDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTM 368
+L++G +++ATPGRL D+ + L YLVLDEAD+MLDMGFEPQI +I+ D
Sbjct: 360 EELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKIL-LDVR 418
Query: 369 PPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTS-ENITQKVVWVEDLDKRS 427
P R T+M SAT+P + LA+ +L E + + VG + + ++ Q ++ + +K S
Sbjct: 419 PD---RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWS 475
Query: 428 FLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 487
+ L + S +VFV K AD L L + S+HGDR QRDRE+AL F++
Sbjct: 476 HMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKT 535
Query: 488 GKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKN 547
GK IL+AT +A+RGLD+ +V HV NFD P +IEEYVHRIGRTGR G G++ + +
Sbjct: 536 GKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRND 595
Query: 548 MNITKDLLDLLVEAKQEVPSWLENMA 573
+ +L+++L A Q +P L +MA
Sbjct: 596 WRVASELINILERANQSIPEELVSMA 621
>gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]
Length = 938
Score = 268 bits (686), Expect = 9e-72
Identities = 165/459 (35%), Positives = 248/459 (54%), Gaps = 27/459 (5%)
Query: 166 VEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTG 225
+ +G+ P +F+ E +M I + YT+PTP+Q +P+ RD++ A+TG
Sbjct: 241 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG 300
Query: 226 SGKTAAFLLPILSQIYTDG---PGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYE 282
SGKTAAF+ P+L I PG+ PI++++ PTREL QI+
Sbjct: 301 SGKTAAFIWPMLIHIMDQKELEPGDG----------------PIAVIVCPTRELCQQIHA 344
Query: 283 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 342
E ++F +R VYGG + +Q + L+ G ++V TPGRL+D +++ L YL
Sbjct: 345 ECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYL 404
Query: 343 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 402
V DEADRM DMGFE Q+R I + R T++FSATF K+I+ LARD L + I +
Sbjct: 405 VFDEADRMFDMGFEYQVRSIASH----VRPDRQTLLFSATFRKKIEKLARDILIDPIRVV 460
Query: 403 VGRVGSTSENITQKV-VWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYH 461
G +G +E++TQ V + K ++L L S L+FV K A+ L + L
Sbjct: 461 QGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQ 520
Query: 462 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIE 521
EG+ +HGD Q +R + + F+ P+LVAT VAARGLDI +++ VIN+D+ DI+
Sbjct: 521 EGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDID 580
Query: 522 EYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGG 581
+ HRIGRTGR G G+A + K+ N DL+ L A Q V L ++A ++ +
Sbjct: 581 THTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRK 640
Query: 582 SRGR-SKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSS 619
SR + K + + G G YR+ G S RG+++
Sbjct: 641 SRFKGGKGKKLNIGGGGLGYRERPGLGSENM--DRGNNN 677
>gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]
Length = 938
Score = 268 bits (686), Expect = 9e-72
Identities = 165/459 (35%), Positives = 248/459 (54%), Gaps = 27/459 (5%)
Query: 166 VEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTG 225
+ +G+ P +F+ E +M I + YT+PTP+Q +P+ RD++ A+TG
Sbjct: 241 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG 300
Query: 226 SGKTAAFLLPILSQIYTDG---PGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYE 282
SGKTAAF+ P+L I PG+ PI++++ PTREL QI+
Sbjct: 301 SGKTAAFIWPMLIHIMDQKELEPGDG----------------PIAVIVCPTRELCQQIHA 344
Query: 283 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 342
E ++F +R VYGG + +Q + L+ G ++V TPGRL+D +++ L YL
Sbjct: 345 ECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYL 404
Query: 343 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 402
V DEADRM DMGFE Q+R I + R T++FSATF K+I+ LARD L + I +
Sbjct: 405 VFDEADRMFDMGFEYQVRSIASH----VRPDRQTLLFSATFRKKIEKLARDILIDPIRVV 460
Query: 403 VGRVGSTSENITQKV-VWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYH 461
G +G +E++TQ V + K ++L L S L+FV K A+ L + L
Sbjct: 461 QGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQ 520
Query: 462 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIE 521
EG+ +HGD Q +R + + F+ P+LVAT VAARGLDI +++ VIN+D+ DI+
Sbjct: 521 EGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDID 580
Query: 522 EYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGG 581
+ HRIGRTGR G G+A + K+ N DL+ L A Q V L ++A ++ +
Sbjct: 581 THTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRK 640
Query: 582 SRGR-SKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSS 619
SR + K + + G G YR+ G S RG+++
Sbjct: 641 SRFKGGKGKKLNIGGGGLGYRERPGLGSENM--DRGNNN 677
>gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo
sapiens]
Length = 631
Score = 245 bits (625), Expect = 1e-64
Identities = 142/395 (35%), Positives = 220/395 (55%), Gaps = 18/395 (4%)
Query: 200 RPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYG 259
+PTP+Q A PII DL+ AQTG+GKT ++L+P I+ D + + + NG
Sbjct: 244 KPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMP--GFIHLDS--QPISREQRNG--- 296
Query: 260 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 319
P LVL PTRELA+ + E K+SY+ C+ YGG + QI D+ +G +++
Sbjct: 297 -----PGMLVLTPTRELALHVEAECSKYSYKGLKSICI-YGGRNRNGQIEDISKGVDIII 350
Query: 320 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 379
ATPGRL D+ + L YLV+DEAD+MLDM FEPQIR+I+ D P R T+M
Sbjct: 351 ATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKIL-LDVRPD---RQTVMT 406
Query: 380 SATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN-ITQKVVWVEDLDKRSFLLDILGATGS 438
SAT+P ++ LA +L + + + VG + + N + Q ++ + +KR+ + +
Sbjct: 407 SATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSP 466
Query: 439 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498
+ ++FV K AD L +G + S+HG+ Q D+E A+ F+SG IL+ T +
Sbjct: 467 NDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDI 526
Query: 499 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLL 558
+RGLD+++V HV N+D P +I+ YVHR+G GR G G + + +++ + +L+ +L
Sbjct: 527 VSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKIL 586
Query: 559 VEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSG 593
A Q VP L MA ++ R R +R G
Sbjct: 587 DRANQSVPEDLVVMAEQYKLNQQKRHRETRSRKPG 621
>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
sapiens]
Length = 619
Score = 230 bits (587), Expect = 3e-60
Identities = 145/417 (34%), Positives = 229/417 (54%), Gaps = 25/417 (5%)
Query: 177 IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPI 236
I +F + E++ N++ + Y PTP+Q IP+ RD++A A TGSGKTAAFLLP+
Sbjct: 202 IIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPV 261
Query: 237 LSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKF-SYRSRVRP 295
+ ++A+ E+ + P +L+L PTRELA+QI +A++ S R++
Sbjct: 262 I-----------MRALFES-------KTPSALILTPTRELAIQIERQAKELMSGLPRMKT 303
Query: 296 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 355
++ GG + Q+ L++ +++ATPGRL+D++++ + L K +V+DEAD ML MGF
Sbjct: 304 VLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGF 363
Query: 356 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 415
+ Q+ I+E P + T++ SAT P I+ LA L + + G N+ Q
Sbjct: 364 QQQVLDILENI---PNDCQ-TILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQ 419
Query: 416 KVVWVEDLDKRSFLLDILGATGS-DSLTLVFVETKKGADSLEDFLYH-EGYACTSIHGDR 473
++WVED K+ L +IL LVFV+ K GAD L + + G SIH ++
Sbjct: 420 IILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEK 479
Query: 474 SQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRV 533
SQ +R+ L G ++V+T V RGLD+ +VR V+NFD+PS ++EYVH+IGR GR+
Sbjct: 480 SQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRL 539
Query: 534 GNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNR 590
G G A +F N + + D+ + +P L N Y H K + + K +
Sbjct: 540 GQNGTAITFINNNSKRLFWDIAKRVKPTGSILPPQLLNSPYLHDQKRKEQQKDKQTQ 596
>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
sapiens]
Length = 796
Score = 211 bits (538), Expect = 1e-54
Identities = 133/383 (34%), Positives = 205/383 (53%), Gaps = 28/383 (7%)
Query: 179 NFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILS 238
+F D+++ ++ I + +PTP+QK IP+ +D+ ACA TG+GKTAAF LP+L
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 278
Query: 239 QIYTDGPGEALKAVKENGRYGRRKQYPIS--LVLAPTRELAVQIYEEARKFSYRSRVRPC 296
++ + +Q P++ LVL PTREL +Q++ R+ + + C
Sbjct: 279 RLIY-----------------KPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTC 321
Query: 297 VVYGGADIGQQIRDLERGCHLLVATPGRLVDMMER-GKIGLDFCKYLVLDEADRMLDMGF 355
+ GG D+ Q L +L+ATPGRL+D + L + L+LDEADRMLD F
Sbjct: 322 LAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYF 381
Query: 356 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 415
E Q++ I+ + R TM+FSAT E++ LA L + + V + + Q
Sbjct: 382 EEQMKEIIRMCSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQ 437
Query: 416 KVVWVE---DLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGD 472
+ + + + D+ + + +L T +D + L F +TKK A + L G +HG+
Sbjct: 438 EFIRIRPNREGDREAIVAALLTRTFTDHVML-FTQTKKQAHRMHILLGLMGLQVGELHGN 496
Query: 473 RSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGR 532
SQ R EAL +F+ + ILVAT VAARGLDI V+ VINF +P+ I+ YVHR+GRT R
Sbjct: 497 LSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTAR 556
Query: 533 VGNLGLATSFFNEKNMNITKDLL 555
G G + S E + K+++
Sbjct: 557 AGRAGRSVSLVGEDERKMLKEIV 579
>gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Homo sapiens]
Length = 455
Score = 210 bits (535), Expect = 3e-54
Identities = 131/382 (34%), Positives = 207/382 (54%), Gaps = 24/382 (6%)
Query: 178 ENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPIL 237
+ F D+ + +++ + +T+PT +Q AIP+ RD++ A+TGSGKT AF LPIL
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 238 SQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCV 297
+ + Q +LVL PTRELA QI E+ V+ V
Sbjct: 84 NALL------------------ETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAV 125
Query: 298 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDEADRMLDMGFE 356
+ GG D Q L + H+++ATPGRL+D +E K L KYLV+DEADR+L+M FE
Sbjct: 126 IVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFE 185
Query: 357 PQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQK 416
++ +I++ + P+ R T +FSAT K++Q L R L + AV T E + Q
Sbjct: 186 TEVDKILK---VIPRD-RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241
Query: 417 VVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQR 476
+++ K ++L+ IL +S ++F T L + G+ +HG SQ
Sbjct: 242 YIFIPSKFKDTYLVYILNELAGNSF-MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQS 300
Query: 477 DREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNL 536
R +L++F++ IL+AT VA+RGLDI +V V+NFD+P+ ++Y+HR+GRT R G
Sbjct: 301 KRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRS 360
Query: 537 GLATSFFNEKNMNITKDLLDLL 558
G A +F + ++ + + + L+
Sbjct: 361 GKAITFVTQYDVELFQRIEHLI 382
>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
[Homo sapiens]
Length = 411
Score = 209 bits (531), Expect = 9e-54
Identities = 141/414 (34%), Positives = 219/414 (52%), Gaps = 34/414 (8%)
Query: 154 TGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIP-II 212
T + FE +++ V T F + + E ++ I + +P+ +Q+ AI II
Sbjct: 24 TKVEFETSEEVDVTPT----------FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQII 73
Query: 213 KGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAP 272
KG RD++A +Q+G+GKTA F + +L + V+E +L+LAP
Sbjct: 74 KG-RDVIAQSQSGTGKTATFSISVLQCLDIQ--------VRETQ----------ALILAP 114
Query: 273 TRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERG 332
TRELAVQI + V+ GG ++G+ IR L+ G H++ TPGR+ DM+ R
Sbjct: 115 TRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRR 174
Query: 333 KIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLAR 392
+ K LVLDEAD ML+ GF+ QI + +PP ++ SAT P EI +
Sbjct: 175 SLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRY--LPP--ATQVVLISATLPHEILEMTN 230
Query: 393 DFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGA 452
F+ + I + V R T E I Q V VE + + L L T + + ++F TK+
Sbjct: 231 KFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKV 290
Query: 453 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVI 512
D L + + + +S+HGD Q++RE + +FRSG S +L++T V ARGLD+ V +I
Sbjct: 291 DWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLII 350
Query: 513 NFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 566
N+DLP++ E Y+HRIGR+GR G G+A +F ++ I +D+ E+P
Sbjct: 351 NYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 404
>gi|38569503 ATP-dependent RNA helicase ROK1 isoform b [Homo
sapiens]
Length = 491
Score = 206 bits (524), Expect = 6e-53
Identities = 141/440 (32%), Positives = 232/440 (52%), Gaps = 34/440 (7%)
Query: 145 EQELFSGGNTGINFEKYDDI----PVEATGSNCPPHIENFSDID----MGEIIMGNIELT 196
E +L SG + EK + + + G++ P I F +D + ++ NI
Sbjct: 16 ESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDA 75
Query: 197 RYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENG 256
+ PTP+Q AIP++ R+L+A A TGSGKT AF +PIL Q+ K+
Sbjct: 76 GFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQL------------KQPA 123
Query: 257 RYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLE-RGC 315
G R +L+++PTRELA QI+ E K S + R +++ A ++ +
Sbjct: 124 NKGFR-----ALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKF 178
Query: 316 HLLVATPGRLVDMMERGKIGLDFC--KYLVLDEADRMLD---MGFEPQIRRIVEQDTMPP 370
+LV TP RL+ ++++ G+D ++LV+DE+D++ + GF Q+ I T
Sbjct: 179 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 238
Query: 371 KGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLL 430
VR M FSATF +++ + LD I +++G S E + Q++++V + +
Sbjct: 239 --VRRAM-FSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAM 295
Query: 431 DILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKS 490
L G + LVFV++ + A L L +EG IH +R+Q+ R+ +H FR+GK
Sbjct: 296 RELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKI 355
Query: 491 PILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNI 550
+L+ TA+ ARG+D V VIN+D P+ EY+HRIGRTGR GN G A +FF E + +
Sbjct: 356 WVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPL 415
Query: 551 TKDLLDLLVEAKQEVPSWLE 570
+ + +++ +A VP +++
Sbjct: 416 LRSVANVIQQAGCPVPEYIK 435
>gi|38569505 ATP-dependent RNA helicase ROK1 isoform a [Homo
sapiens]
Length = 599
Score = 206 bits (524), Expect = 6e-53
Identities = 141/440 (32%), Positives = 232/440 (52%), Gaps = 34/440 (7%)
Query: 145 EQELFSGGNTGINFEKYDDI----PVEATGSNCPPHIENFSDID----MGEIIMGNIELT 196
E +L SG + EK + + + G++ P I F +D + ++ NI
Sbjct: 124 ESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDA 183
Query: 197 RYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENG 256
+ PTP+Q AIP++ R+L+A A TGSGKT AF +PIL Q+ K+
Sbjct: 184 GFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQL------------KQPA 231
Query: 257 RYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLE-RGC 315
G R +L+++PTRELA QI+ E K S + R +++ A ++ +
Sbjct: 232 NKGFR-----ALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKF 286
Query: 316 HLLVATPGRLVDMMERGKIGLDFC--KYLVLDEADRMLD---MGFEPQIRRIVEQDTMPP 370
+LV TP RL+ ++++ G+D ++LV+DE+D++ + GF Q+ I T
Sbjct: 287 DILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 346
Query: 371 KGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLL 430
VR M FSATF +++ + LD I +++G S E + Q++++V + +
Sbjct: 347 --VRRAM-FSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAM 403
Query: 431 DILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKS 490
L G + LVFV++ + A L L +EG IH +R+Q+ R+ +H FR+GK
Sbjct: 404 RELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKI 463
Query: 491 PILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNI 550
+L+ TA+ ARG+D V VIN+D P+ EY+HRIGRTGR GN G A +FF E + +
Sbjct: 464 WVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPL 523
Query: 551 TKDLLDLLVEAKQEVPSWLE 570
+ + +++ +A VP +++
Sbjct: 524 LRSVANVIQQAGCPVPEYIK 543
>gi|4503529 eukaryotic translation initiation factor 4A isoform 1
[Homo sapiens]
Length = 406
Score = 202 bits (514), Expect = 8e-52
Identities = 130/398 (32%), Positives = 216/398 (54%), Gaps = 25/398 (6%)
Query: 171 SNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAI-PIIKGKRDLMACAQTGSGKT 229
SN +++F D+++ E ++ I + +P+ +Q+ AI P IKG D++A AQ+G+GKT
Sbjct: 25 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGY-DVIAQAQSGTGKT 83
Query: 230 AAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSY 289
A F + IL QI D LKA + +LVLAPTRELA QI +
Sbjct: 84 ATFAISILQQIELD-----LKATQ-------------ALVLAPTRELAQQIQKVVMALGD 125
Query: 290 RSRVRPCVVYGGADIGQQIRDLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLVLDEAD 348
GG ++ +++ L+ H++V TPGR+ DM+ R + + K VLDEAD
Sbjct: 126 YMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEAD 185
Query: 349 RMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGS 408
ML GF+ QI I ++ + V + SAT P ++ + + F+ + I + V +
Sbjct: 186 EMLSRGFKDQIYDIFQKLNSNTQVV----LLSATMPSDVLEVTKKFMRDPIRILVKKEEL 241
Query: 409 TSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTS 468
T E I Q + VE + + L L T + + ++F+ T++ D L + ++ + ++
Sbjct: 242 TLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSA 301
Query: 469 IHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIG 528
+HGD Q++R+ + +FRSG S +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIG
Sbjct: 302 MHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIG 361
Query: 529 RTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 566
R GR G G+A + E++ +D+ + +E+P
Sbjct: 362 RGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMP 399
>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
sapiens]
Length = 407
Score = 202 bits (513), Expect = 1e-51
Identities = 136/422 (32%), Positives = 224/422 (53%), Gaps = 28/422 (6%)
Query: 150 SGGNTGINFEKYDDIPVEATG---SNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQK 206
SGG+ N E ++ G SN ++NF D+++ E ++ I + +P+ +Q+
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 207 HAI-PIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYP 265
AI P IKG D++A AQ+G+GKTA F + IL Q+ + KE
Sbjct: 62 RAIIPCIKGY-DVIAQAQSGTGKTATFAISILQQLEIE--------FKETQ--------- 103
Query: 266 ISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGC-HLLVATPGR 324
+LVLAPTRELA QI + GG ++ +++ L+ H++V TPGR
Sbjct: 104 -ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGR 162
Query: 325 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 384
+ DM+ R + + K VLDEAD ML GF+ QI I ++ + V + SAT P
Sbjct: 163 VFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV----LLSATMP 218
Query: 385 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLV 444
++ + + F+ + I + V + T E I Q + VE + + L L T + + ++
Sbjct: 219 TDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVI 278
Query: 445 FVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLD 504
F+ T++ D L + ++ + +++HGD Q++R+ + +FRSG S +L+ T + ARG+D
Sbjct: 279 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 338
Query: 505 ISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQE 564
+ V VIN+DLP++ E Y+HRIGR GR G G+A +F E++ I +D+ +E
Sbjct: 339 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 398
Query: 565 VP 566
+P
Sbjct: 399 MP 400
>gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo
sapiens]
Length = 783
Score = 187 bits (476), Expect = 2e-47
Identities = 143/440 (32%), Positives = 218/440 (49%), Gaps = 44/440 (10%)
Query: 118 ERSGHSRWCDKSVEDDWSKPLP---PSERLEQELFSGGNTGINFEKYDDIPVEATGSNCP 174
E +G +R +++ + P P PSE +E N E +IPVE
Sbjct: 138 EMNGETREKSPKLKNGFPHPEPDCNPSEAASEES--------NSEIEQEIPVEQKEGA-- 187
Query: 175 PHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLL 234
FS+ + E + ++ T P+Q + +DL+A A+TG+GKT +F +
Sbjct: 188 -----FSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAI 242
Query: 235 PILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVR 294
P++ +++ GE ++ + GR Q LVLAPTRELA Q+ ++ + + V
Sbjct: 243 PLIEKLH----GEL-----QDRKRGRAPQV---LVLAPTRELANQVSKDFSDITKKLSV- 289
Query: 295 PCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMG 354
YGG G Q + G +LV TPGR+ D ++ GK+ L K++VLDE D+MLDMG
Sbjct: 290 -ACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMG 348
Query: 355 FEPQIRRIVEQD-TMPPKGVRHTMMFSATFPKEIQMLARDFLD------EYIFLAVGRVG 407
F Q+ I+ + T++FSAT P + +A+ ++ + I +
Sbjct: 349 FADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTA 408
Query: 408 STSENITQKVVWVEDLDKRSFLLDILGA-TGSDSLTLVFVETKKGADSLEDFLYHEGYAC 466
T E++ K W + + + + D++ +G T++F ETKK A L + A
Sbjct: 409 ITVEHLAIKCHWTQ---RAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQDA- 464
Query: 467 TSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHR 526
S+HGD Q+ RE L FR+G +LVAT VAARGLDI V VI P D+E Y+HR
Sbjct: 465 QSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHR 524
Query: 527 IGRTGRVGNLGLATSFFNEK 546
GRTGR G G+ F+ K
Sbjct: 525 SGRTGRAGRTGVCICFYQHK 544
>gi|13129006 nucleolar protein GU2 [Homo sapiens]
Length = 737
Score = 182 bits (461), Expect = 1e-45
Identities = 120/376 (31%), Positives = 196/376 (52%), Gaps = 28/376 (7%)
Query: 180 FSDIDMGEIIMGNIELTRYTRPTPVQKHAI-PIIKGKRDLMACAQTGSGKTAAFLLPILS 238
FS+ + E + ++ T P+Q P+ +GK DL+A A+TG+GKT +F +P++
Sbjct: 139 FSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGK-DLIAQARTGTGKTFSFAIPLIE 197
Query: 239 QIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV 298
++ + N ++ + P LVLAPTRELA Q+ ++ + + + V
Sbjct: 198 RL------------QRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSV--ACF 243
Query: 299 YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ 358
YGG QI + G +LV TPGR+ D ++ G++ L +++VLDE D+MLD+GF Q
Sbjct: 244 YGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQ 303
Query: 359 IRRIVEQD-TMPPKGVRHTMMFSATFPKEIQMLARDFLD------EYIFLAVGRVGSTSE 411
+ I+ + + T++FSAT P+ + +A+ ++ + + + +T E
Sbjct: 304 VEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVE 363
Query: 412 NITQKVVWVEDLDKRSFLLDILGA-TGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIH 470
++ + W + + + + D+L +GS+ ++F ETKK + H +H
Sbjct: 364 HLAIQCHWSQ---RPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMA-MNPHIKQNAQCLH 419
Query: 471 GDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRT 530
GD +Q RE L FR G +LVAT VAARGLDI V VI P D+E Y+HR GRT
Sbjct: 420 GDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRT 479
Query: 531 GRVGNLGLATSFFNEK 546
GR G G+ F+ +
Sbjct: 480 GRAGRTGICICFYQPR 495
>gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
sapiens]
Length = 483
Score = 180 bits (457), Expect = 3e-45
Identities = 120/393 (30%), Positives = 204/393 (51%), Gaps = 26/393 (6%)
Query: 187 EIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPG 246
E++MG E+ + +P+P+Q+ +IPI RD++A A+ G+GK+ A+L+P+L
Sbjct: 106 ELLMGIFEMG-WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLL--------- 155
Query: 247 EALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVRPCVVYGGADIG 305
E L K+N + ++V+ PTRELA+Q+ + + S + + GG ++
Sbjct: 156 ERLDLKKDNIQ---------AMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLR 206
Query: 306 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ 365
I L+ H+++ATPGR++D++++G +D + +VLDEAD++L F + I+
Sbjct: 207 DDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIIL- 265
Query: 366 DTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDK 425
T+P R +++SATFP +Q L + + + T + +TQ +V + K
Sbjct: 266 -TLPKN--RQILLYSATFPLSVQKFMNSHLQKPYEINL-MEELTLKGVTQYYAYVTERQK 321
Query: 426 RSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQF 485
L+ L + + +++F + + + L + GY+C IH Q R H F
Sbjct: 322 -VHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDF 380
Query: 486 RSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNE 545
R+G LV T + RG+DI V VINFD P E Y+HRIGR+GR G+LGLA +
Sbjct: 381 RNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITY 440
Query: 546 KNMNITKDLLDLLVEAKQEVPSWLENMAYEHHY 578
+ K + + L + +PS ++ Y Y
Sbjct: 441 DDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEY 473
>gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2
[Homo sapiens]
Length = 881
Score = 180 bits (456), Expect = 4e-45
Identities = 116/363 (31%), Positives = 185/363 (50%), Gaps = 21/363 (5%)
Query: 180 FSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQ 239
F + + + I Y PTP+Q+ IP+I +D++A A+TGSGKTA FLLP+ +
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157
Query: 240 IYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVY 299
+ T +A L+L+PTRELA+Q + ++ + ++ ++
Sbjct: 158 LKTHSAQTGARA----------------LILSPTRELALQTLKFTKELGKFTGLKTALIL 201
Query: 300 GGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQI 359
GG + Q L +++ATPGRLV + + L +Y+V DEADR+ +MGF Q+
Sbjct: 202 GGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQL 261
Query: 360 RRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVW 419
+ I+ + +P G T++FSAT PK + AR L E + + + +E +
Sbjct: 262 QEIIAR--LP--GGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFL 317
Query: 420 VEDLDKRSFLLDIL-GATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR 478
V + K + LL +L T+VFV TK A+ L + L + +C I+ R
Sbjct: 318 VREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTAR 377
Query: 479 EEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGL 538
+ L +F GK L+ T +AARGLDI + +VIN+ P+ + ++HR+GR R G G
Sbjct: 378 KINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGT 437
Query: 539 ATS 541
A S
Sbjct: 438 AYS 440
>gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1
[Homo sapiens]
Length = 882
Score = 180 bits (456), Expect = 4e-45
Identities = 116/363 (31%), Positives = 185/363 (50%), Gaps = 21/363 (5%)
Query: 180 FSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQ 239
F + + + I Y PTP+Q+ IP+I +D++A A+TGSGKTA FLLP+ +
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157
Query: 240 IYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVY 299
+ T +A L+L+PTRELA+Q + ++ + ++ ++
Sbjct: 158 LKTHSAQTGARA----------------LILSPTRELALQTLKFTKELGKFTGLKTALIL 201
Query: 300 GGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQI 359
GG + Q L +++ATPGRLV + + L +Y+V DEADR+ +MGF Q+
Sbjct: 202 GGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQL 261
Query: 360 RRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVW 419
+ I+ + +P G T++FSAT PK + AR L E + + + +E +
Sbjct: 262 QEIIAR--LP--GGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFL 317
Query: 420 VEDLDKRSFLLDIL-GATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR 478
V + K + LL +L T+VFV TK A+ L + L + +C I+ R
Sbjct: 318 VREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTAR 377
Query: 479 EEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGL 538
+ L +F GK L+ T +AARGLDI + +VIN+ P+ + ++HR+GR R G G
Sbjct: 378 KINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGT 437
Query: 539 ATS 541
A S
Sbjct: 438 AYS 440
>gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo
sapiens]
Length = 483
Score = 178 bits (452), Expect = 1e-44
Identities = 123/392 (31%), Positives = 198/392 (50%), Gaps = 29/392 (7%)
Query: 180 FSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQ 239
F+++ + ++ +PTPVQ IP I RD + CA+TGSGKTAAF+LPIL +
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 240 IYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVY 299
+ D G LVL PTRELA QI E+ R ++ C++
Sbjct: 64 LSEDPYGI------------------FCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIV 105
Query: 300 GGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDEADRMLDMG---F 355
GG D+ Q +L R H+++ATPGRL D + + ++LV+DEADR+L+ G F
Sbjct: 106 GGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDF 165
Query: 356 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 415
+ I+ +P + R T++FSAT ++ L ++ F ST E + Q
Sbjct: 166 TVDLEAILA--AVPAR--RQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQ 221
Query: 416 KVVWVEDLDKRSFLLDILGA---TGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGD 472
+ + V + K ++L+ ++ D ++F T K L L + ++H
Sbjct: 222 RYLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSM 281
Query: 473 RSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGR 532
Q++R AL +F+S IL+AT VA+RGLDI V+ VIN + P + Y+HR+GRT R
Sbjct: 282 MKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTAR 341
Query: 533 VGNLGLATSFFNEKNMNITKDLLDLLVEAKQE 564
G G A + + ++++ + + + + +E
Sbjct: 342 AGRQGQAITLVTQYDIHLVHAIEEQIKKKLEE 373
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,856,949
Number of Sequences: 37866
Number of extensions: 1318511
Number of successful extensions: 11529
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 5573
Number of HSP's gapped (non-prelim): 2941
length of query: 660
length of database: 18,247,518
effective HSP length: 109
effective length of query: 551
effective length of database: 14,120,124
effective search space: 7780188324
effective search space used: 7780188324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.