Search of human proteins with 6005900

Search of human proteins with 6005900

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6005900 transcription factor Dp-1 [Homo sapiens]
         (410 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6005900 transcription factor Dp-1 [Homo sapiens]                   815   0.0  
gi|189409125 transcription factor Dp family, member 3 [Homo sapi...   574   e-164
gi|5454112 transcription factor Dp-2 (E2F dimerization partner 2...   437   e-123
gi|12669915 E2F transcription factor 4 [Homo sapiens]                  41   0.002
gi|4503433 E2F transcription factor 3 [Homo sapiens]                   40   0.003
gi|12669911 E2F transcription factor 1 [Homo sapiens]                  40   0.005
gi|70166430 GRINL1A combined protein isoform 2 [Homo sapiens]          39   0.007
gi|70166414 GRINL1A combined protein isoform 1 [Homo sapiens]          39   0.007
gi|111494235 GRINL1A combined protein isoform 8 [Homo sapiens]         39   0.007
gi|70166580 GRINL1A upstream protein isoform 7 [Homo sapiens]          39   0.007
gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]       37   0.025
gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]       37   0.025
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    35   0.094
gi|4758226 E2F transcription factor 2 [Homo sapiens]                   34   0.21 
gi|145580626 E2F transcription factor 7 [Homo sapiens]                 34   0.21 
gi|44890059 involucrin [Homo sapiens]                                  34   0.27 
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...    34   0.27 
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho...    34   0.27 
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho...    34   0.27 
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho...    34   0.27 
gi|109637795 E2F transcription factor 6 [Homo sapiens]                 33   0.47 
gi|148792970 TAF4b RNA polymerase II, TATA box binding protein (...    33   0.47 
gi|151301053 RNA binding motif protein 33 [Homo sapiens]               32   1.0  
gi|38505226 E2F family member 8 [Homo sapiens]                         32   1.0  
gi|96975038 coiled-coil domain containing 100 [Homo sapiens]           32   1.0  
gi|221139761 zinc finger protein 853 [Homo sapiens]                    32   1.4  
gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-l...    31   1.8  
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l...    31   1.8  
gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-l...    31   1.8  
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l...    31   1.8  

>gi|6005900 transcription factor Dp-1 [Homo sapiens]
          Length = 410

 Score =  815 bits (2106), Expect = 0.0
 Identities = 410/410 (100%), Positives = 410/410 (100%)

Query: 1   MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ 60
           MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ
Sbjct: 1   MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ 60

Query: 61  QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS 120
           QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS
Sbjct: 61  QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS 120

Query: 121 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN 180
           MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN
Sbjct: 121 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN 180

Query: 181 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN 240
           IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN
Sbjct: 181 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN 240

Query: 241 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL 300
           RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL
Sbjct: 241 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL 300

Query: 301 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS 360
           KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS
Sbjct: 301 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS 360

Query: 361 ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD 410
           ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
Sbjct: 361 ASDLTNGADGMLATSSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD 410


>gi|189409125 transcription factor Dp family, member 3 [Homo
           sapiens]
          Length = 405

 Score =  574 bits (1479), Expect = e-164
 Identities = 309/411 (75%), Positives = 338/411 (82%), Gaps = 7/411 (1%)

Query: 1   MAKDAGLIEANGELKVFIDQNLSPGKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQ 60
           MAK   L EAN ELKV +D+N +        VAVH STVNPLGKQLLPKTFGQS+VNI Q
Sbjct: 1   MAKYVSLTEANEELKVLMDENQTSRP-----VAVHTSTVNPLGKQLLPKTFGQSSVNIDQ 55

Query: 61  QVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAGKRNRKGEKNGKGLRHFS 120
           QVVIG PQRPAASN  VVGSP+ PSTHFASQNQ S SSP  AG+ NRKGEKNG GL   S
Sbjct: 56  QVVIGMPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLS 115

Query: 121 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN 180
           MKV E VQRKGTTS  EV  ELVA+F AA NH  PNESAYD KNI+RR YDALNVLMAMN
Sbjct: 116 MKVWETVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMN 175

Query: 181 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN 240
           IIS+EKK+IKWIGL TNSAQ CQNL VERQ+RLERIKQKQS+LQ+LILQQIAFKNLV RN
Sbjct: 176 IISREKKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRN 235

Query: 241 RHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVL 300
           ++ E+Q S+ P PNSVIH+PFII+++SKKTVI+CSIS+DK EYLF F+++FEIHDD EVL
Sbjct: 236 QYVEEQVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVL 295

Query: 301 KRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTVGGVFITTAGSTSNGTRFS 360
             MGM  GLESGSCSAEDLKMAR+LVPKALEPYVTEMAQGT GGVF TTAGS SNGT  S
Sbjct: 296 MWMGMTFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVF-TTAGSRSNGTWLS 354

Query: 361 ASDLTNGADGMLATSSNGSQYSGSRVETP-VSYVGEDDEEDDDFNENDEDD 410
           ASDLTN A GMLATSS GSQYSGSRVETP V    E+D  DDD +ENDEDD
Sbjct: 355 ASDLTNIAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD 405


>gi|5454112 transcription factor Dp-2 (E2F dimerization partner 2)
           [Homo sapiens]
          Length = 386

 Score =  437 bits (1124), Expect = e-123
 Identities = 233/386 (60%), Positives = 284/386 (73%), Gaps = 39/386 (10%)

Query: 62  VVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAG----------------KR 105
           ++I TPQR  +S ++++GSP+TP+    +Q   ++++ W  G                KR
Sbjct: 1   MIISTPQRLTSSGSVLIGSPYTPAPAMVTQTHIAEATGWVPGDRKRARKFIDSDFSESKR 60

Query: 106 NRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNI 165
           ++KG+KNGKGLRHFSMKVCEKVQRKGTTSYNEVADELV+EF+ ++NH+  +  AYDQKNI
Sbjct: 61  SKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQKNI 120

Query: 166 RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQE 225
           RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLE+E+QRR+ERIKQK++QLQE
Sbjct: 121 RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQE 180

Query: 226 LILQQIAFKNLVQRNRHAEQQASRPPPPNSVIHLPFIIVNTSKKTVIDCSISNDKFEYLF 285
           L+LQQIAFKNLVQRNR  EQQ   PP  NS I LPFII+NTS+KTVIDCSIS+DKFEYLF
Sbjct: 181 LLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISSDKFEYLF 240

Query: 286 NFDNTFEIHDDIEVLKRMGMACGLESGSCSAEDLKMARSLVPKALEPYVTEMAQGTV--- 342
           NFDNTFEIHDDIEVLKRMGM+ GLESG CS EDLK+A+SLVPKALE Y+T+++ G     
Sbjct: 241 NFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKALEGYITDISTGPSWLN 300

Query: 343 GGVFITTAGSTSN-----GTRFSASDLTNG----ADGMLAT-----------SSNGSQYS 382
            G+ + +  S SN     G     S +  G    A+  LAT           SS  S  S
Sbjct: 301 QGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCS 360

Query: 383 GSRVETPVSYVGEDDEEDDDFNENDE 408
            SR ETP S+  ED+E+D++ + + E
Sbjct: 361 ESRGETPCSFNDEDEEDDEEDSSSPE 386


>gi|12669915 E2F transcription factor 4 [Homo sapiens]
          Length = 413

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 10/118 (8%)

Query: 131 GTTSYNE-----VADELVAEFSAADNHILPNESAYDQKNIR--RRVYDALNVLMAMNIIS 183
           GT S +E     +  + V+    A + +L  + A D   +R  RR+YD  NVL  + +I 
Sbjct: 13  GTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIE 72

Query: 184 KE-KKEIKWIGL-PTNSAQECQNLEVERQRRLERIKQKQSQL-QELILQQIAFKNLVQ 238
           K+ K  I+W G+ P  + +E  +  +E +  +E ++Q++ +L Q  +  Q + +N+ +
Sbjct: 73  KKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTE 130


>gi|4503433 E2F transcription factor 3 [Homo sapiens]
          Length = 465

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 36/207 (17%)

Query: 53  QSNVNIAQQVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAG--------K 104
           QS    A  ++   P     + +L+  +PH PS+      QP       +G        +
Sbjct: 75  QSGAVAAGPLLPSAPGAEQTAGSLLYTTPHGPSSRAGLLQQPPALGRGGSGGGGGPPAKR 134

Query: 105 RNRKGEKN------------GKGLRHFSMKVCEKVQRKGT------TSYNEVADELVAEF 146
           R   GE              GKG          K  +  +      TS   +  + +   
Sbjct: 135 RLELGESGHQYLSDGLKTPKGKGRAALRSPDSPKTPKSPSEKTRYDTSLGLLTKKFIQLL 194

Query: 147 SAADNHILP-NESAYDQKNIRRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNS----AQ 200
           S + + +L  N++A   K  +RR+YD  NVL  +++I K+ K  ++W+G   +       
Sbjct: 195 SQSPDGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKKSKNNVQWMGCSLSEDGGMLA 254

Query: 201 ECQNLEVERQRRLERIKQKQSQLQELI 227
           +CQ L  E    +  + Q++ +L ELI
Sbjct: 255 QCQGLSKE----VTELSQEEKKLDELI 277


>gi|12669911 E2F transcription factor 1 [Homo sapiens]
          Length = 437

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 17/127 (13%)

Query: 101 SAGKRNRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFS-AADNHILPNESA 159
           S+G    +G   GKG++    K       +  TS N      +   S +AD  +  N +A
Sbjct: 104 SSGPARGRGRHPGKGVKSPGEK------SRYETSLNLTTKRFLELLSHSADGVVDLNWAA 157

Query: 160 YDQKNIRRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNSAQECQNLEVERQRRLERIKQ 218
              K  +RR+YD  NVL  + +I+K+ K  I+W+G  T          V    RLE + Q
Sbjct: 158 EVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTT---------VGVGGRLEGLTQ 208

Query: 219 KQSQLQE 225
              QLQE
Sbjct: 209 DLRQLQE 215


>gi|70166430 GRINL1A combined protein isoform 2 [Homo sapiens]
          Length = 445

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 41/217 (18%)

Query: 44  KQLLPKTFGQSNVNIAQQVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAG 103
           +QLL  + G+    + Q VV G  +R                   + QNQ  +   +   
Sbjct: 53  EQLLDLSNGEPTRKLPQGVVYGVVRR-------------------SDQNQQKEMVVYGWS 93

Query: 104 KRNRKGEKNG-KGLRHFSMKVCEKVQRKGTTSYNEVAD---ELVAEFSAA-------DNH 152
               K E N  K +R       EKV+++    Y+E+     +L  E S +       +NH
Sbjct: 94  TSQLKEEMNYIKDVR----ATLEKVRKRMYGDYDEMRQKIRQLTQELSVSHAQQEYLENH 149

Query: 153 ILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRR 212
           I    SA D+       ++A+N  +A + I  +K  +      +N   + +NL+   +  
Sbjct: 150 IQTQSSALDR-------FNAMNSALASDSIGLQKTLVDVTLENSNIKDQIRNLQQTYEAS 202

Query: 213 LERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQASR 249
           ++++++KQ QL+   ++    K  V+ ++ A  +  R
Sbjct: 203 MDKLREKQRQLEVAQVENQLLKMKVESSQEANAEVMR 239


>gi|70166414 GRINL1A combined protein isoform 1 [Homo sapiens]
          Length = 550

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 41/217 (18%)

Query: 44  KQLLPKTFGQSNVNIAQQVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAG 103
           +QLL  + G+    + Q VV G  +R                   + QNQ  +   +   
Sbjct: 53  EQLLDLSNGEPTRKLPQGVVYGVVRR-------------------SDQNQQKEMVVYGWS 93

Query: 104 KRNRKGEKNG-KGLRHFSMKVCEKVQRKGTTSYNEVAD---ELVAEFSAA-------DNH 152
               K E N  K +R       EKV+++    Y+E+     +L  E S +       +NH
Sbjct: 94  TSQLKEEMNYIKDVR----ATLEKVRKRMYGDYDEMRQKIRQLTQELSVSHAQQEYLENH 149

Query: 153 ILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRR 212
           I    SA D+       ++A+N  +A + I  +K  +      +N   + +NL+   +  
Sbjct: 150 IQTQSSALDR-------FNAMNSALASDSIGLQKTLVDVTLENSNIKDQIRNLQQTYEAS 202

Query: 213 LERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQASR 249
           ++++++KQ QL+   ++    K  V+ ++ A  +  R
Sbjct: 203 MDKLREKQRQLEVAQVENQLLKMKVESSQEANAEVMR 239


>gi|111494235 GRINL1A combined protein isoform 8 [Homo sapiens]
          Length = 438

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 41/217 (18%)

Query: 44  KQLLPKTFGQSNVNIAQQVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAG 103
           +QLL  + G+    + Q VV G  +R                   + QNQ  +   +   
Sbjct: 53  EQLLDLSNGEPTRKLPQGVVYGVVRR-------------------SDQNQQKEMVVYGWS 93

Query: 104 KRNRKGEKNG-KGLRHFSMKVCEKVQRKGTTSYNEVAD---ELVAEFSAA-------DNH 152
               K E N  K +R       EKV+++    Y+E+     +L  E S +       +NH
Sbjct: 94  TSQLKEEMNYIKDVR----ATLEKVRKRMYGDYDEMRQKIRQLTQELSVSHAQQEYLENH 149

Query: 153 ILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRR 212
           I    SA D+       ++A+N  +A + I  +K  +      +N   + +NL+   +  
Sbjct: 150 IQTQSSALDR-------FNAMNSALASDSIGLQKTLVDVTLENSNIKDQIRNLQQTYEAS 202

Query: 213 LERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQASR 249
           ++++++KQ QL+   ++    K  V+ ++ A  +  R
Sbjct: 203 MDKLREKQRQLEVAQVENQLLKMKVESSQEANAEVMR 239


>gi|70166580 GRINL1A upstream protein isoform 7 [Homo sapiens]
          Length = 466

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 41/217 (18%)

Query: 44  KQLLPKTFGQSNVNIAQQVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSPWSAG 103
           +QLL  + G+    + Q VV G  +R                   + QNQ  +   +   
Sbjct: 53  EQLLDLSNGEPTRKLPQGVVYGVVRR-------------------SDQNQQKEMVVYGWS 93

Query: 104 KRNRKGEKNG-KGLRHFSMKVCEKVQRKGTTSYNEVAD---ELVAEFSAA-------DNH 152
               K E N  K +R       EKV+++    Y+E+     +L  E S +       +NH
Sbjct: 94  TSQLKEEMNYIKDVR----ATLEKVRKRMYGDYDEMRQKIRQLTQELSVSHAQQEYLENH 149

Query: 153 ILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRR 212
           I    SA D+       ++A+N  +A + I  +K  +      +N   + +NL+   +  
Sbjct: 150 IQTQSSALDR-------FNAMNSALASDSIGLQKTLVDVTLENSNIKDQIRNLQQTYEAS 202

Query: 213 LERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQASR 249
           ++++++KQ QL+   ++    K  V+ ++ A  +  R
Sbjct: 203 MDKLREKQRQLEVAQVENQLLKMKVESSQEANAEVMR 239


>gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]
          Length = 345

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 15/107 (14%)

Query: 141 ELVAEFSAADNHILPNESAYDQKNIR--RRVYDALNVLMAMNIISKE-KKEIKWIGLPTN 197
           + V+    A + +L  ++A D   +R  RR+YD  NVL  +++I K+ K  I+W G+   
Sbjct: 61  KFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAG 120

Query: 198 SAQECQNLEV-ERQRRLE------RIKQKQSQLQELILQQIAFKNLV 237
               C   EV +R R L+       +K+++   Q+L LQQ + KN++
Sbjct: 121 ----CNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQ-SIKNVM 162


>gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]
          Length = 346

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 15/107 (14%)

Query: 141 ELVAEFSAADNHILPNESAYDQKNIR--RRVYDALNVLMAMNIISKE-KKEIKWIGLPTN 197
           + V+    A + +L  ++A D   +R  RR+YD  NVL  +++I K+ K  I+W G+   
Sbjct: 61  KFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAG 120

Query: 198 SAQECQNLEV-ERQRRLE------RIKQKQSQLQELILQQIAFKNLV 237
               C   EV +R R L+       +K+++   Q+L LQQ + KN++
Sbjct: 121 ----CNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQ-SIKNVM 162


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 35.4 bits (80), Expect = 0.094
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 194  LPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQASRPPPP 253
            +PT+   + QN     Q   E+++Q+Q +L+E+ILQQ   K +  R     Q +   P P
Sbjct: 2359 VPTSGVTDTQNTVNMAQADTEKLRQRQ-KLREIILQQQQQKKIAGRQEKGSQDSPAVPHP 2417

Query: 254  NSVIH 258
              + H
Sbjct: 2418 GPLQH 2422


>gi|4758226 E2F transcription factor 2 [Homo sapiens]
          Length = 437

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 3/109 (2%)

Query: 133 TSYNEVADELVAEFSAADNHILPNESAYDQKNI-RRRVYDALNVLMAMNIISKE-KKEIK 190
           TS   +  + +   S +++ +L    A +  ++ +RR+YD  NVL  + +I K+ K  I+
Sbjct: 132 TSLGLLTKKFIYLLSESEDGVLDLNWAAEVLDVQKRRIYDITNVLEGIQLIRKKAKNNIQ 191

Query: 191 WIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQ-QIAFKNLVQ 238
           W+G            + +  + L+ +   +  L +LI    ++FK+L +
Sbjct: 192 WVGRGMFEDPTRPGKQQQLGQELKELMNTEQALDQLIQSCSLSFKHLTE 240


>gi|145580626 E2F transcription factor 7 [Homo sapiens]
          Length = 911

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 13/122 (10%)

Query: 141 ELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISK--------EKKEIKWI 192
           ++ A+    ++   P+ S +  K   RR+YD  NVL ++ +I K         K   KWI
Sbjct: 309 DVAAKILIEESQDAPDHSKFKTKV--RRLYDIANVLTSLALIKKVHVTEERGRKPAFKWI 366

Query: 193 GLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFK---NLVQRNRHAEQQASR 249
           G    S+ + + ++V      E  ++   Q+Q    Q++A     N VQ +   +++ + 
Sbjct: 367 GPVDFSSSDEELVDVSASVLPELKRETYGQIQVCAKQKLARHGSFNTVQASERIQRKVNS 426

Query: 250 PP 251
            P
Sbjct: 427 EP 428



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 166 RRRVYDALNVLMAMNIISK-EKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQ 224
           RRR+YD +NVL +++++S+  K +  W G   +  +  +NL  +R    ++ +++ + LQ
Sbjct: 183 RRRIYDIVNVLESLHLVSRVAKNQYGWHG-RHSLPKTLRNL--QRLGEEQKYEEQMAYLQ 239

Query: 225 ELILQQIAFK 234
           +  L  I +K
Sbjct: 240 QKELDLIDYK 249


>gi|44890059 involucrin [Homo sapiens]
          Length = 585

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)

Query: 192 IGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQ 246
           +GLP     + + LE ++Q + + +++++ QL+ L+ Q+   K+LVQ+    EQQ
Sbjct: 363 LGLPEQQVLQLKQLE-KQQGQPKHLEEEEGQLKHLVQQEGQLKHLVQQEGQLEQQ 416



 Score = 28.9 bits (63), Expect = 8.8
 Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 39/219 (17%)

Query: 58  IAQQVVIGTPQRPAASNTLVVGSPHTPSTHFASQNQPSDSSP--------WSAGKRNRKG 109
           ++QQ  +     PA S  L+   P   +TH     QP+   P              +++ 
Sbjct: 1   MSQQHTLPVTLSPALSQELLKTVPPPVNTHQEQMKQPTPLPPPCQKVPVELPVEVPSKQE 60

Query: 110 EKNGKGLRHFSMKVCEKVQRK-GTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRR 168
           EK+   ++    + CE+ Q++       +   E   E+  A+N   P +    +K  R +
Sbjct: 61  EKHMTAVKGLPEQECEQQQKEPQEQELQQQHWEQHEEYQKAEN---PEQQLKQEKTQRDQ 117

Query: 169 VYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELIL 228
             +          + +EKK +             Q L+ E  +R E++  K+ QL EL  
Sbjct: 118 QLN--------KQLEEEKKLLD------------QQLDQELVKRDEQLGMKKEQLLELPE 157

Query: 229 QQIA-FKNLVQRN---RHAEQQASR---PPPPNSVIHLP 260
           QQ    K+L Q+    +H EQQ  +   P      + LP
Sbjct: 158 QQEGHLKHLEQQEGQLKHPEQQEGQLELPEQQEGQLELP 196


>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
            sapiens]
          Length = 1972

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 129  RKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKE 188
            RK T    ++++EL  E S A      NESA  Q  + R+  +  + L  M    K K +
Sbjct: 1760 RKATQQAEQLSNELATERSTAQK----NESARQQ--LERQNKELRSKLHEMEGAVKSKFK 1813

Query: 189  IKWIGLPTNSAQECQNLEVE---RQRRLERIKQKQSQLQELILQ 229
                 L    AQ  + +E E   +Q   + +KQK  +L+E++LQ
Sbjct: 1814 STIAALEAKIAQLEEQVEQEAREKQAATKSLKQKDKKLKEILLQ 1857


>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
            sapiens]
          Length = 1979

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 129  RKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKE 188
            RK T    ++++EL  E S A      NESA  Q  + R+  +  + L  M    K K +
Sbjct: 1767 RKATQQAEQLSNELATERSTAQK----NESARQQ--LERQNKELRSKLHEMEGAVKSKFK 1820

Query: 189  IKWIGLPTNSAQECQNLEVE---RQRRLERIKQKQSQLQELILQ 229
                 L    AQ  + +E E   +Q   + +KQK  +L+E++LQ
Sbjct: 1821 STIAALEAKIAQLEEQVEQEAREKQAATKSLKQKDKKLKEILLQ 1864


>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
            sapiens]
          Length = 1945

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 129  RKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKE 188
            RK T    ++++EL  E S A      NESA  Q  + R+  +  + L  M    K K +
Sbjct: 1767 RKATQQAEQLSNELATERSTAQK----NESARQQ--LERQNKELRSKLHEMEGAVKSKFK 1820

Query: 189  IKWIGLPTNSAQECQNLEVE---RQRRLERIKQKQSQLQELILQ 229
                 L    AQ  + +E E   +Q   + +KQK  +L+E++LQ
Sbjct: 1821 STIAALEAKIAQLEEQVEQEAREKQAATKSLKQKDKKLKEILLQ 1864


>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
            sapiens]
          Length = 1938

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 129  RKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKE 188
            RK T    ++++EL  E S A      NESA  Q  + R+  +  + L  M    K K +
Sbjct: 1760 RKATQQAEQLSNELATERSTAQK----NESARQQ--LERQNKELRSKLHEMEGAVKSKFK 1813

Query: 189  IKWIGLPTNSAQECQNLEVE---RQRRLERIKQKQSQLQELILQ 229
                 L    AQ  + +E E   +Q   + +KQK  +L+E++LQ
Sbjct: 1814 STIAALEAKIAQLEEQVEQEAREKQAATKSLKQKDKKLKEILLQ 1857


>gi|109637795 E2F transcription factor 6 [Homo sapiens]
          Length = 281

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 166 RRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQ 224
           +RRVYD  NVL  ++++ K+ K  I+WIG   ++       + + Q  L  +   +  L 
Sbjct: 100 KRRVYDITNVLDGIDLVEKKSKNHIRWIGSDLSNFGAVPQ-QKKLQEELSDLSAMEDALD 158

Query: 225 ELI 227
           ELI
Sbjct: 159 ELI 161


>gi|148792970 TAF4b RNA polymerase II, TATA box binding protein
           (TBP)-associated factor, 105kDa [Homo sapiens]
          Length = 862

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 15/133 (11%)

Query: 103 GKRNRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQ 162
           GK++   E N   +   S    E++ R        +A   +  + A++N+IL +++    
Sbjct: 668 GKKHDITELNSDAVNLISQATQERL-RGLLEKLTAIAQHRMTTYKASENYILCSDTR--- 723

Query: 163 KNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQ 222
                     L  L  ++ + K++K+++   +   +A+   N E   Q RL   KQK  +
Sbjct: 724 --------SQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRL---KQKAKE 772

Query: 223 LQELILQQIAFKN 235
           LQ+L L QI  ++
Sbjct: 773 LQQLELAQIQHRD 785


>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
          Length = 1170

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)

Query: 205 LEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQASRPPPP 253
           L++E Q+RL     KQ +L+         K L++R    +QQ   PPPP
Sbjct: 792 LKIEEQKRLREEILKQKELRRQQQAGARKKELLERLAQQQQQLYAPPPP 840


>gi|38505226 E2F family member 8 [Homo sapiens]
          Length = 867

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 148 AADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISK-EKKEIKWIG 193
           A +N I  +E A +    RRR+YD +NVL +++++S+  K    W G
Sbjct: 136 AVNNDICLDEVAEELNVERRRIYDIVNVLESLHMVSRLAKNRYTWHG 182


>gi|96975038 coiled-coil domain containing 100 [Homo sapiens]
          Length = 986

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 170 YDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQ 229
           Y  L   +   +I  EK+E +   + +   +E + L+ ERQR L+ ++    + +E  + 
Sbjct: 705 YTILEGKLQKTLIDLEKREQQLASVESELQREKKELQSERQRNLQELQDSIRRAKEDCIH 764

Query: 230 QIAFKNL----VQRNRHAEQQ 246
           Q+  + L    ++ ++H  QQ
Sbjct: 765 QVELERLKIKQLEEDKHRLQQ 785


>gi|221139761 zinc finger protein 853 [Homo sapiens]
          Length = 659

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 7/68 (10%)

Query: 184 KEKKEIKWIGLPTNSAQEC--QNLEVERQRRLERIKQKQSQLQELI---LQQIAFKNLVQ 238
           +E+ E++ + +   S QE   Q  E+ERQ+ LER +Q+Q QLQ  +   LQQ+  + L Q
Sbjct: 317 EEEVELELMPVDLGSEQELEQQRQELERQQELER-QQEQRQLQLKLQEELQQLE-QQLEQ 374

Query: 239 RNRHAEQQ 246
           + +  EQQ
Sbjct: 375 QQQQLEQQ 382



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)

Query: 194 LPTNSAQECQNLEVERQRRLER--IKQKQSQLQELILQQIAFKNLVQRNRHAEQQASRPP 251
           L    AQ  Q L  ++Q +L++  + Q+Q QLQ+   QQ+    L Q+    +QQ  +PP
Sbjct: 255 LQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQL----LQQQQEQLQQQQLQPP 310

Query: 252 P 252
           P
Sbjct: 311 P 311



 Score = 28.9 bits (63), Expect = 8.8
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)

Query: 200 QECQNLEVERQRRL----ERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQ 246
           Q+ Q  +V+ Q+RL    E+++ +Q+Q Q+++ QQ   +  VQ  +  +QQ
Sbjct: 157 QQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQ 207


>gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 2 [Homo sapiens]
          Length = 601

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 12/125 (9%)

Query: 121 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN 180
           M+  EK++R  +   N++A+ L  E  A  + +   E  + +K + R         +A  
Sbjct: 273 MRRVEKLERSLSKLKNQMAEPLPPEPPAVPSEV---ELQHLRKELER---------VAGE 320

Query: 181 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN 240
           + ++ KK  +   L     +  Q  E   +++ ERI+++   LQ+L   Q  F+     N
Sbjct: 321 LQAQVKKNQRISLLNQRQEERIQEQEERLRKQEERIQEQHKSLQQLAKPQSVFEEPNNEN 380

Query: 241 RHAEQ 245
           ++A Q
Sbjct: 381 KNALQ 385


>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 630

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 12/125 (9%)

Query: 121 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN 180
           M+  EK++R  +   N++A+ L  E  A  + +   E  + +K + R         +A  
Sbjct: 274 MRRVEKLERSLSKLKNQMAEPLPPEPPAVPSEV---ELQHLRKELER---------VAGE 321

Query: 181 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN 240
           + ++ KK  +   L     +  Q  E   +++ ERI+++   LQ+L   Q  F+     N
Sbjct: 322 LQAQVKKNQRISLLNQRQEERIQEQEERLRKQEERIQEQHKSLQQLAKPQSVFEEPNNEN 381

Query: 241 RHAEQ 245
           ++A Q
Sbjct: 382 KNALQ 386


>gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 [Homo sapiens]
          Length = 602

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 12/125 (9%)

Query: 121 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN 180
           M+  EK++R  +   N++A+ L  E  A  + +   E  + +K + R         +A  
Sbjct: 273 MRRVEKLERSLSKLKNQMAEPLPPEPPAVPSEV---ELQHLRKELER---------VAGE 320

Query: 181 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN 240
           + ++ KK  +   L     +  Q  E   +++ ERI+++   LQ+L   Q  F+     N
Sbjct: 321 LQAQVKKNQRISLLNQRQEERIQEQEERLRKQEERIQEQHKSLQQLAKPQSVFEEPNNEN 380

Query: 241 RHAEQ 245
           ++A Q
Sbjct: 381 KNALQ 385


>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 1 isoform 1 [Homo sapiens]
          Length = 632

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 12/125 (9%)

Query: 121 MKVCEKVQRKGTTSYNEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMN 180
           M+  EK++R  +   N++A+ L  E  A  + +   E  + +K + R         +A  
Sbjct: 274 MRRVEKLERSLSKLKNQMAEPLPPEPPAVPSEV---ELQHLRKELER---------VAGE 321

Query: 181 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRN 240
           + ++ KK  +   L     +  Q  E   +++ ERI+++   LQ+L   Q  F+     N
Sbjct: 322 LQAQVKKNQRISLLNQRQEERIQEQEERLRKQEERIQEQHKSLQQLAKPQSVFEEPNNEN 381

Query: 241 RHAEQ 245
           ++A Q
Sbjct: 382 KNALQ 386


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.129    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,948,565
Number of Sequences: 37866
Number of extensions: 733703
Number of successful extensions: 4416
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 4125
Number of HSP's gapped (non-prelim): 298
length of query: 410
length of database: 18,247,518
effective HSP length: 105
effective length of query: 305
effective length of database: 14,271,588
effective search space: 4352834340
effective search space used: 4352834340
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.