Guide to the Human Genome
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Name: PSKH1 Sequence: fasta or formatted (424aa) NCBI GI: 27901803
Description:

protein serine kinase H1

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         30           2
 C cysteine            1.4          6           1
 D aspartate           4.7         20           2
 E glutamate           5.9         25           1
 F phenylalanine       2.6         11           1
 G glycine             5.9         25           2
 H histidine           2.4         10           1
 I isoleucine          4.5         19           3
 K lysine              6.1         26           2
 L leucine             8.3         35           2
 M methionine          2.6         11           1
 N asparagine          2.4         10           1
 P proline             6.1         26           2
 Q glutamine           3.3         14           3
 R arginine           10.1         43           2
 S serine              8.0         34           3
 T threonine           6.1         26           2
 V valine              7.5         32           2
 W tryptophan          0.7          3           1
 Y tyrosine            4.2         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein serine kinase H1 
PSKH2                 0.547   protein serine kinase H2 
CAMK1D                0.315   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.315   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK1                 0.309   calcium/calmodulin-dependent protein kinase I 
PNCK                  0.282   pregnancy upregulated non-ubiquitously expressed Ca...
PNCK                  0.282   pregnancy upregulated non-ubiquitously expressed Ca...
CAMK1G                0.272   calcium/calmodulin-dependent protein kinase IG [Homo...
CAMK4                 0.259   calcium/calmodulin-dependent protein kinase IV 
CAMK2D                0.238   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.238   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.238   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.238   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.238   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.238   calcium/calmodulin-dependent protein kinase II delta...
CAMKV                 0.236   CaM kinase-like vesicle-associated 
CAMK2A                0.229   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.229   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2B                0.229   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.229   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.229   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.229   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.229   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.229   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.229   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.229   calcium/calmodulin-dependent protein kinase II beta ...
RPS6KA2               0.225   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.225   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
CAMK2G                0.224   calcium/calmodulin-dependent protein kinase II gamma...
DCLK1                 0.224   doublecortin-like kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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