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Search of human proteins with 6005824
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6005824 Sec23-interacting protein p125 [Homo sapiens]
(1000 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6005824 Sec23-interacting protein p125 [Homo sapiens] 2026 0.0
gi|54792780 DDHD domain containing 2 [Homo sapiens] 754 0.0
gi|237757346 DDHD domain containing 1 isoform c [Homo sapiens] 114 5e-25
gi|237757342 DDHD domain containing 1 isoform a [Homo sapiens] 114 5e-25
gi|237757344 DDHD domain containing 1 isoform b [Homo sapiens] 112 2e-24
gi|195927015 phosphatidylinositol transfer protein, membrane-ass... 62 3e-09
gi|195927017 phosphatidylinositol transfer protein, membrane-ass... 61 5e-09
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 60 8e-09
gi|4809279 annexin VII isoform 2 [Homo sapiens] 57 1e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 56 1e-07
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 56 1e-07
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 55 3e-07
gi|163965366 nascent polypeptide-associated complex alpha subuni... 55 3e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 3e-07
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 55 3e-07
gi|7706501 WW domain binding protein 11 [Homo sapiens] 55 3e-07
gi|33946327 nucleoporin 214kDa [Homo sapiens] 54 1e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 54 1e-06
gi|4502111 annexin VII isoform 1 [Homo sapiens] 54 1e-06
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 53 1e-06
gi|150170670 piccolo isoform 2 [Homo sapiens] 53 2e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 53 2e-06
gi|34304383 Usher syndrome 1G protein [Homo sapiens] 53 2e-06
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 52 3e-06
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 52 3e-06
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 52 3e-06
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 52 3e-06
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 52 3e-06
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 52 3e-06
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 52 3e-06
>gi|6005824 Sec23-interacting protein p125 [Homo sapiens]
Length = 1000
Score = 2026 bits (5248), Expect = 0.0
Identities = 1000/1000 (100%), Positives = 1000/1000 (100%)
Query: 1 MAERKPNGGSGGASTSSSGTNLLFSSSATEFSFNVPFIPVTQASASPASLLLPGEDSTDV 60
MAERKPNGGSGGASTSSSGTNLLFSSSATEFSFNVPFIPVTQASASPASLLLPGEDSTDV
Sbjct: 1 MAERKPNGGSGGASTSSSGTNLLFSSSATEFSFNVPFIPVTQASASPASLLLPGEDSTDV 60
Query: 61 GEEDSFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTAL 120
GEEDSFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTAL
Sbjct: 61 GEEDSFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTAL 120
Query: 121 PFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGY 180
PFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGY
Sbjct: 121 PFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGY 180
Query: 181 NPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSP 240
NPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSP
Sbjct: 181 NPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSP 240
Query: 241 AQQQVPARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKEVEYKQLWMPFSVFDSLNLEEIY 300
AQQQVPARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKEVEYKQLWMPFSVFDSLNLEEIY
Sbjct: 241 AQQQVPARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKEVEYKQLWMPFSVFDSLNLEEIY 300
Query: 301 NSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWFYKGDTDSRFIPYTE 360
NSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWFYKGDTDSRFIPYTE
Sbjct: 301 NSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWFYKGDTDSRFIPYTE 360
Query: 361 EFSEKLEAEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPDEWGTTQDGQTR 420
EFSEKLEAEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPDEWGTTQDGQTR
Sbjct: 361 EFSEKLEAEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPDEWGTTQDGQTR 420
Query: 421 PRVVKRGIDDNLDEIPDGEMPQVDHLVFVVHGIGPVCDLRFRSIIECVDDFRVVSLKLLR 480
PRVVKRGIDDNLDEIPDGEMPQVDHLVFVVHGIGPVCDLRFRSIIECVDDFRVVSLKLLR
Sbjct: 421 PRVVKRGIDDNLDEIPDGEMPQVDHLVFVVHGIGPVCDLRFRSIIECVDDFRVVSLKLLR 480
Query: 481 THFKKSLDDGKVSRVEFLPVHWHSSLGGDATGVDRNIKKITLPSIGRFRHFTNETLLDIL 540
THFKKSLDDGKVSRVEFLPVHWHSSLGGDATGVDRNIKKITLPSIGRFRHFTNETLLDIL
Sbjct: 481 THFKKSLDDGKVSRVEFLPVHWHSSLGGDATGVDRNIKKITLPSIGRFRHFTNETLLDIL 540
Query: 541 FYNSPTYCQTIVEKVGMEINHLHALFMSRNPDFKGGVSVAGHSLGSLILFDILSNQKDLN 600
FYNSPTYCQTIVEKVGMEINHLHALFMSRNPDFKGGVSVAGHSLGSLILFDILSNQKDLN
Sbjct: 541 FYNSPTYCQTIVEKVGMEINHLHALFMSRNPDFKGGVSVAGHSLGSLILFDILSNQKDLN 600
Query: 601 LSKCPGPLAVANGVVKQLHFQEKQMPEEPKLTLDESYDLVVENKEVLTLQETLEALSLSE 660
LSKCPGPLAVANGVVKQLHFQEKQMPEEPKLTLDESYDLVVENKEVLTLQETLEALSLSE
Sbjct: 601 LSKCPGPLAVANGVVKQLHFQEKQMPEEPKLTLDESYDLVVENKEVLTLQETLEALSLSE 660
Query: 661 YFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVEHKAAKLKKAASEKKAVAAT 720
YFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVEHKAAKLKKAASEKKAVAAT
Sbjct: 661 YFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVEHKAAKLKKAASEKKAVAAT 720
Query: 721 STKGQEQSAQKTKDMASLPSESNEPKRKLPVGACVSSVCVNYESFEVGAGQVSVAYNSLD 780
STKGQEQSAQKTKDMASLPSESNEPKRKLPVGACVSSVCVNYESFEVGAGQVSVAYNSLD
Sbjct: 721 STKGQEQSAQKTKDMASLPSESNEPKRKLPVGACVSSVCVNYESFEVGAGQVSVAYNSLD 780
Query: 781 FEPEIFFALGSPIAMFLTIRGVDRIDENYSLPTCKGFFNIYHPLDPVAYRLEPMIVPDLD 840
FEPEIFFALGSPIAMFLTIRGVDRIDENYSLPTCKGFFNIYHPLDPVAYRLEPMIVPDLD
Sbjct: 781 FEPEIFFALGSPIAMFLTIRGVDRIDENYSLPTCKGFFNIYHPLDPVAYRLEPMIVPDLD 840
Query: 841 LKAVLIPHHKGRKRLHLELKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQE 900
LKAVLIPHHKGRKRLHLELKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQE
Sbjct: 841 LKAVLIPHHKGRKRLHLELKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQE 900
Query: 901 ELEKVANQIKEEEEKQVVEAEKVVESPDFSKDEDYLGKVGMLNGGRRIDYVLQEKPIESF 960
ELEKVANQIKEEEEKQVVEAEKVVESPDFSKDEDYLGKVGMLNGGRRIDYVLQEKPIESF
Sbjct: 901 ELEKVANQIKEEEEKQVVEAEKVVESPDFSKDEDYLGKVGMLNGGRRIDYVLQEKPIESF 960
Query: 961 NEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQPQH 1000
NEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQPQH
Sbjct: 961 NEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQPQH 1000
>gi|54792780 DDHD domain containing 2 [Homo sapiens]
Length = 711
Score = 754 bits (1947), Expect = 0.0
Identities = 403/772 (52%), Positives = 520/772 (67%), Gaps = 72/772 (9%)
Query: 235 SSVQSPAQQQVPARPGAPSVQVPSPFLLQNQ-----YEPVQPHWFYCKEVEYKQLWMPFS 289
SSVQS +Q + P +PS S F L + YEPV PHWFYCK ++ K+ W+PF+
Sbjct: 2 SSVQSQQEQLSQSDP-SPSPNSCSSFELIDMDAGSLYEPVSPHWFYCKIIDSKETWIPFN 60
Query: 290 VFDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWFYKG 349
DS LEE Y+S + VV TDGGRYDV+L +R+R A YW+E +EVRRCTWFYKG
Sbjct: 61 SEDSQQLEEAYSSGKGCNGRVV-PTDGGRYDVHLGERMRYAVYWDELASEVRRCTWFYKG 119
Query: 350 DTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPD 409
D D++++PY+E S+ LE Y AVT ++W ++LE P+ E I++HNPK++V +QP + D
Sbjct: 120 DKDNKYVPYSESSSQVLEETYMLAVTLDEWKKKLESPNREIIILHNPKLMVHYQPVAGSD 179
Query: 410 EWGTTQDGQTRPRVVKRGIDDNLDEIPDGEMPQVDHLVFVVHGIGPVCDLRFRSIIECVD 469
WG+T Q RPR VKRG+++ +I GE Q+DHLVFVVHGIGP CDLRFRSI++CV+
Sbjct: 180 GWGSTPTEQGRPRTVKRGVENISVDIHCGEPLQIDHLVFVVHGIGPACDLRFRSIVQCVN 239
Query: 470 DFRVVSLKLLRTHFKKSLDDGKVSRVEFLPVHWHSSLGGDATGVDRNIKKITLPSIGRFR 529
DFR VSL LL+THFKK+ ++ ++ RVEFLPV+WHS L +TGVD ++++ITLPSI R R
Sbjct: 240 DFRSVSLNLLQTHFKKAQENQQIGRVEFLPVNWHSPL--HSTGVDVDLQRITLPSINRLR 297
Query: 530 HFTNETLLDILFYNSPTYCQTIVEKVGMEINHLHALFMSRNPDFKGGVSVAGHSLGSLIL 589
HFTN+T+LD+ FYNSPTYCQTIV+ V E+N ++ LF+ RNPDFKGGVS+AGHSLGSLIL
Sbjct: 298 HFTNDTILDVFFYNSPTYCQTIVDTVASEMNRIYTLFLQRNPDFKGGVSIAGHSLGSLIL 357
Query: 590 FDILSNQKDLNLSKCPGPLAVANGVVKQLHFQEKQMPEEPKLTLDESYDLVVENKEVLTL 649
FDIL+NQKD + G + EK +S ++V+ + TL
Sbjct: 358 FDILTNQKD------------SLGDID----SEK-----------DSLNIVMYQGDTPTL 390
Query: 650 QETLEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVEHKAAKLKK 709
+E L+ L LSE+F FEKEK+D E+L +CT DL+E+GIPLGPRKKI N+ +
Sbjct: 391 EEDLKKLQLSEFFDIFEKEKVDKEALALCTDRDLQEIGIPLGPRKKILNYFSTR------ 444
Query: 710 AASEKKAVAATSTKGQEQSAQKTKDMASLPSESNEPKRKLPVGACVSSVCVNYESFEVGA 769
++ G ++ A + A++P ES C SS N + +VG
Sbjct: 445 ----------KNSMGIKRPAPQPASGANIPKESE---------FCSSSNTRNGDYLDVGI 485
Query: 770 GQVSVAYNSLDFEPEIFFALGSPIAMFLTIRGVDRIDENYSLPTCKGFFNIYHPLDPVAY 829
GQVSV Y L ++PEIFFA GSPI MFLT+RG+ RID NY PTCKGFFNIYHP DPVAY
Sbjct: 486 GQVSVKYPRLIYKPEIFFAFGSPIGMFLTVRGLKRIDPNYRFPTCKGFFNIYHPFDPVAY 545
Query: 830 RLEPMIVPDLDLKAVLIPHHKGRKRLHLELKESLSRMGSDLKQGFISSLKSAWQTLNEFA 889
R+EPM+VP ++ + +LIPHHKGRKR+HLEL+E L+RM DLK + SL+ AW++ F
Sbjct: 546 RIEPMVVPGVEFEPMLIPHHKGRKRMHLELREGLTRMSMDLKNNLLGSLRMAWKS---FT 602
Query: 890 RAHTSSTQLQEELEKVANQIKEEEEKQVVEAEKVVESPDFS---KDEDYLGKVGMLNGGR 946
RA + Q E E+ E E + E V + + S K+E VGMLNGG+
Sbjct: 603 RAPYPALQASETPEET-----EAEPESTSEKPSDVNTEETSVAVKEEVLPINVGMLNGGQ 657
Query: 947 RIDYVLQEKPIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQP 998
RIDYVLQEKPIESFNEYLFALQSHLCYWESEDT LL+LKEIY+T I +QP
Sbjct: 658 RIDYVLQEKPIESFNEYLFALQSHLCYWESEDTVLLVLKEIYQTQGIFLDQP 709
>gi|237757346 DDHD domain containing 1 isoform c [Homo sapiens]
Length = 900
Score = 114 bits (285), Expect = 5e-25
Identities = 132/524 (25%), Positives = 206/524 (39%), Gaps = 119/524 (22%)
Query: 226 PPGSLPPVPSSVQ-------SPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKE 278
PP P VP++ SP +++ R G P+ + + + + P + WFY ++
Sbjct: 119 PPQQPPLVPTNSGGGGATGGSPGERK-RTRLGGPAAR--HRYEVVTELGPEEVRWFYKED 175
Query: 279 VEYKQLWMPFSVFDSLNLEEIYNSVQP--------------------------------- 305
K+ W PF +DSL +E + ++
Sbjct: 176 ---KKTWKPFIGYDSLRIELAFRTLLQTTGARPQGGDRDGDHVCSPTGPASSSGEDDDED 232
Query: 306 ------------DPESVVLGT------DGGRYDVYLYDRIRKAAYWEE-EPAEVRRCTWF 346
+PE V L GG Y+V + YW + + V R WF
Sbjct: 233 RACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWF 292
Query: 347 YKGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRRLEFPSGETI----VMHNPKVIVQF 402
D + P EE S +E E+ Q + ++I +H+ K+
Sbjct: 293 I----DGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKSIDGKDAVHSFKLSRNH 348
Query: 403 QPSSVPDEWGTTQDGQT----RPRVVKRGIDDN-----------LDEIPDGEMP-QVDHL 446
DE D T R K G ++E + P Q H+
Sbjct: 349 VDWHSVDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTTHI 408
Query: 447 VFVVHGIGPVCDLRFRSIIECVDDFRVVSLKLLRTHFKKSLDDGKVSRVEFLPVHWHSSL 506
VFVVHGIG D II+ R + K+ HF + VEFLPV W S L
Sbjct: 409 VFVVHGIGQKMDQG--RIIKNTAMMREAARKIEERHFSNH-----ATHVEFLPVEWRSKL 461
Query: 507 GGDATGVDRNIKKITLPSIGRFRHFTNETLLDILFYNSPTYCQTIVEKVGMEINHLHALF 566
D VD IT + R N + +DI++Y SP Y +V+ + E+N L++LF
Sbjct: 462 TLDGDTVD----SITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQELNRLYSLF 517
Query: 567 MSRNPDF--KGG-VSVAGHSLGSLILFDILSNQKDLNLSKCPGPLAVANGVVKQLHFQEK 623
SRNPDF KGG VS+ HSLG +I +DI++ + L +QL +E+
Sbjct: 518 CSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRL-------------YEQLLQKEE 564
Query: 624 QMPEEPKLTLDESY---DLVVENKEVLTLQETLEALSLSEYFST 664
++P+E ++ +E + +L + + + ++E L L S T
Sbjct: 565 ELPDERWMSYEERHLLDELYITKRRLKEIEERLHGLKASSMTQT 608
Score = 61.2 bits (147), Expect = 5e-09
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 778 SLDFEPEIFFALGSPIAMFLTIRGV---DRIDENYSLPT--CKGFFNIYHPLDPVAYRLE 832
+L F+ E FF +GSP+A+FL +RG+ + +++ LP C NI+HP DPVAYRLE
Sbjct: 610 ALKFKVENFFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLE 669
Query: 833 PMIV 836
P+I+
Sbjct: 670 PLIL 673
>gi|237757342 DDHD domain containing 1 isoform a [Homo sapiens]
Length = 872
Score = 114 bits (285), Expect = 5e-25
Identities = 132/524 (25%), Positives = 206/524 (39%), Gaps = 119/524 (22%)
Query: 226 PPGSLPPVPSSVQ-------SPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKE 278
PP P VP++ SP +++ R G P+ + + + + P + WFY ++
Sbjct: 119 PPQQPPLVPTNSGGGGATGGSPGERK-RTRLGGPAAR--HRYEVVTELGPEEVRWFYKED 175
Query: 279 VEYKQLWMPFSVFDSLNLEEIYNSVQP--------------------------------- 305
K+ W PF +DSL +E + ++
Sbjct: 176 ---KKTWKPFIGYDSLRIELAFRTLLQTTGARPQGGDRDGDHVCSPTGPASSSGEDDDED 232
Query: 306 ------------DPESVVLGT------DGGRYDVYLYDRIRKAAYWEE-EPAEVRRCTWF 346
+PE V L GG Y+V + YW + + V R WF
Sbjct: 233 RACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWF 292
Query: 347 YKGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRRLEFPSGETI----VMHNPKVIVQF 402
D + P EE S +E E+ Q + ++I +H+ K+
Sbjct: 293 I----DGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKSIDGKDAVHSFKLSRNH 348
Query: 403 QPSSVPDEWGTTQDGQT----RPRVVKRGIDDN-----------LDEIPDGEMP-QVDHL 446
DE D T R K G ++E + P Q H+
Sbjct: 349 VDWHSVDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTTHI 408
Query: 447 VFVVHGIGPVCDLRFRSIIECVDDFRVVSLKLLRTHFKKSLDDGKVSRVEFLPVHWHSSL 506
VFVVHGIG D II+ R + K+ HF + VEFLPV W S L
Sbjct: 409 VFVVHGIGQKMDQG--RIIKNTAMMREAARKIEERHFSNH-----ATHVEFLPVEWRSKL 461
Query: 507 GGDATGVDRNIKKITLPSIGRFRHFTNETLLDILFYNSPTYCQTIVEKVGMEINHLHALF 566
D VD IT + R N + +DI++Y SP Y +V+ + E+N L++LF
Sbjct: 462 TLDGDTVD----SITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQELNRLYSLF 517
Query: 567 MSRNPDF--KGG-VSVAGHSLGSLILFDILSNQKDLNLSKCPGPLAVANGVVKQLHFQEK 623
SRNPDF KGG VS+ HSLG +I +DI++ + L +QL +E+
Sbjct: 518 CSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRL-------------YEQLLQKEE 564
Query: 624 QMPEEPKLTLDESY---DLVVENKEVLTLQETLEALSLSEYFST 664
++P+E ++ +E + +L + + + ++E L L S T
Sbjct: 565 ELPDERWMSYEERHLLDELYITKRRLKEIEERLHGLKASSMTQT 608
Score = 72.4 bits (176), Expect = 2e-12
Identities = 73/256 (28%), Positives = 102/256 (39%), Gaps = 51/256 (19%)
Query: 778 SLDFEPEIFFALGSPIAMFLTIRGV---DRIDENYSLPT--CKGFFNIYHPLDPVAYRLE 832
+L F+ E FF +GSP+A+FL +RG+ + +++ LP C NI+HP DPVAYRLE
Sbjct: 610 ALKFKVENFFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLE 669
Query: 833 PMIVPDL-DLKAVLIPHHKGRKRLHLE--------------------------------- 858
P+I+ ++ V I + L E
Sbjct: 670 PLILKHYSNISPVQIHWYNTSNPLPYEHMKPSFLNPAKEPTSVSENEGISTIPSPVTSPV 729
Query: 859 -----LKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQEELEKVANQIKEEE 913
ES++ +G G S K L F+R SST E K E+E
Sbjct: 730 LSRRHYGESITNIGKASILGAASIGKGLGGML--FSRFGRSSTTQSSETSK---DSMEDE 784
Query: 914 EKQVVEAEKVVESPDFSKDEDYLGKVGMLNGGRRIDYVLQEKPIESFNEYLFALQSHLCY 973
+K V L RID+ L+E +ES Y A+ SH Y
Sbjct: 785 KKPVASPSATTVGTQTLPHSSSGFLDSALELDHRIDFELREGLVES--RYWSAVTSHTAY 842
Query: 974 WESEDTALLLLKEIYR 989
W S D AL LL +Y+
Sbjct: 843 WSSLDVALFLLTFMYK 858
>gi|237757344 DDHD domain containing 1 isoform b [Homo sapiens]
Length = 879
Score = 112 bits (280), Expect = 2e-24
Identities = 127/531 (23%), Positives = 205/531 (38%), Gaps = 126/531 (23%)
Query: 226 PPGSLPPVPSSVQ-------SPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKE 278
PP P VP++ SP +++ R G P+ + + + + P + WFY ++
Sbjct: 119 PPQQPPLVPTNSGGGGATGGSPGERK-RTRLGGPAAR--HRYEVVTELGPEEVRWFYKED 175
Query: 279 VEYKQLWMPFSVFDSLNLEEIYNSVQP--------------------------------- 305
K+ W PF +DSL +E + ++
Sbjct: 176 ---KKTWKPFIGYDSLRIELAFRTLLQTTGARPQGGDRDGDHVCSPTGPASSSGEDDDED 232
Query: 306 ------------DPESVVLGT------DGGRYDVYLYDRIRKAAYWEE-EPAEVRRCTWF 346
+PE V L GG Y+V + YW + + V R WF
Sbjct: 233 RACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWF 292
Query: 347 YKGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRRLEFPSGETIVMH-----NPKVIVQ 401
D + P EE S +E E+ Q + ++I N +
Sbjct: 293 I----DGTWQPLEEEESNLIEQEHLNCFRGQQMQENFDIEVSKSIDGKDGSGINYSAVHS 348
Query: 402 FQPSSVPDEWGTTQD----GQTRPRVVKRGIDDNL------------------DEIPDGE 439
F+ S +W + + + R + L + + +
Sbjct: 349 FKLSRNHVDWHSVDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDK 408
Query: 440 MPQVDHLVFVVHGIGPVCDLRFRSIIECVDDFRVVSLKLLRTHFKKSLDDGKVSRVEFLP 499
Q H+VFVVHGIG D II+ R + K+ HF + VEFLP
Sbjct: 409 PSQTTHIVFVVHGIGQKMDQG--RIIKNTAMMREAARKIEERHFSNH-----ATHVEFLP 461
Query: 500 VHWHSSLGGDATGVDRNIKKITLPSIGRFRHFTNETLLDILFYNSPTYCQTIVEKVGMEI 559
V W S L D VD IT + R N + +DI++Y SP Y +V+ + E+
Sbjct: 462 VEWRSKLTLDGDTVD----SITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQEL 517
Query: 560 NHLHALFMSRNPDF--KGG-VSVAGHSLGSLILFDILSNQKDLNLSKCPGPLAVANGVVK 616
N L++LF SRNPDF KGG VS+ HSLG +I +DI++ + L +
Sbjct: 518 NRLYSLFCSRNPDFEEKGGKVSIVSHSLGCVITYDIMTGWNPVRL-------------YE 564
Query: 617 QLHFQEKQMPEEPKLTLDESY---DLVVENKEVLTLQETLEALSLSEYFST 664
QL +E+++P+E ++ +E + +L + + + ++E L L S T
Sbjct: 565 QLLQKEEELPDERWMSYEERHLLDELYITKRRLKEIEERLHGLKASSMTQT 615
Score = 72.4 bits (176), Expect = 2e-12
Identities = 73/256 (28%), Positives = 102/256 (39%), Gaps = 51/256 (19%)
Query: 778 SLDFEPEIFFALGSPIAMFLTIRGV---DRIDENYSLPT--CKGFFNIYHPLDPVAYRLE 832
+L F+ E FF +GSP+A+FL +RG+ + +++ LP C NI+HP DPVAYRLE
Sbjct: 617 ALKFKVENFFCMGSPLAVFLALRGIRPGNTGSQDHILPREICNRLLNIFHPTDPVAYRLE 676
Query: 833 PMIVPDL-DLKAVLIPHHKGRKRLHLE--------------------------------- 858
P+I+ ++ V I + L E
Sbjct: 677 PLILKHYSNISPVQIHWYNTSNPLPYEHMKPSFLNPAKEPTSVSENEGISTIPSPVTSPV 736
Query: 859 -----LKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQEELEKVANQIKEEE 913
ES++ +G G S K L F+R SST E K E+E
Sbjct: 737 LSRRHYGESITNIGKASILGAASIGKGLGGML--FSRFGRSSTTQSSETSK---DSMEDE 791
Query: 914 EKQVVEAEKVVESPDFSKDEDYLGKVGMLNGGRRIDYVLQEKPIESFNEYLFALQSHLCY 973
+K V L RID+ L+E +ES Y A+ SH Y
Sbjct: 792 KKPVASPSATTVGTQTLPHSSSGFLDSALELDHRIDFELREGLVES--RYWSAVTSHTAY 849
Query: 974 WESEDTALLLLKEIYR 989
W S D AL LL +Y+
Sbjct: 850 WSSLDVALFLLTFMYK 865
>gi|195927015 phosphatidylinositol transfer protein,
membrane-associated isoform a [Homo sapiens]
Length = 1244
Score = 62.0 bits (149), Expect = 3e-09
Identities = 67/284 (23%), Positives = 111/284 (39%), Gaps = 47/284 (16%)
Query: 725 QEQSAQKTKDMASLPSESNEPKRKLPVGACVSSVCVNYESFEVGAGQVSVAYNSLDFEPE 784
+ + +Q + A + S EP+R ++ C S E G S A LDF+
Sbjct: 640 EPEGSQNSLQAAPATTSSWEPRR------ASTAFCPPAASSEAPDGPSSTA--RLDFKVS 691
Query: 785 IFFALGSPIAMFLTIRG--VDRIDENYSLPTCKGFFNIYHPLDPVAYRLEPMIVPDLDLK 842
FF GSP+ + L +R + ++ P C+ +N++H DP A RLEP++ P
Sbjct: 692 GFFLFGSPLGLVLALRKTVMPALEAAQMRPACEQIYNLFHAADPCASRLEPLLAPKFQAI 751
Query: 843 AVL-IPHHKGRKRLHLELKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQEE 901
A L +P ++ L + S + +D Q T S+ EE
Sbjct: 752 APLTVPRYQ-----KFPLGDGSSLLLADTLQ--------------------THSSLFLEE 786
Query: 902 LEKVANQIKEEEEKQVVEAEKVVESPDF-----SKDEDYLGKVGMLNGGRRIDYVLQ-EK 955
LE + + ++ P S + + + G +RIDY L +
Sbjct: 787 LEMLVPSTPTSTSGAFWKGSELATDPPAQPAAPSTTSEVVKILERWWGTKRIDYSLYCPE 846
Query: 956 PIESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQPQ 999
+ +F H YWES D +L+++ I E+PQ
Sbjct: 847 ALTAFPTVTLPHLFHASYWESADVVAFILRQV-----IEKERPQ 885
>gi|195927017 phosphatidylinositol transfer protein,
membrane-associated isoform b [Homo sapiens]
Length = 1243
Score = 61.2 bits (147), Expect = 5e-09
Identities = 69/283 (24%), Positives = 110/283 (38%), Gaps = 46/283 (16%)
Query: 725 QEQSAQKTKDMASLPSESNEPKRKLPVGACVSSVCVNYESFEVGAGQVSVAYNSLDFEPE 784
+ + +Q + A + S EP+R ++ C S E G S A LDF+
Sbjct: 640 EPEGSQNSLQAAPATTSSWEPRR------ASTAFCPPAASSEAPDGPSSTA--RLDFKVS 691
Query: 785 IFFALGSPIAMFLTIRG-VDRIDENYSLPTCKGFFNIYHPLDPVAYRLEPMIVPDLDLKA 843
FF GSP+ + L +R V E P C+ +N++H DP A RLEP++ P A
Sbjct: 692 GFFLFGSPLGLVLALRKTVMPALEAQMRPACEQIYNLFHAADPCASRLEPLLAPKFQAIA 751
Query: 844 VL-IPHHKGRKRLHLELKESLSRMGSDLKQGFISSLKSAWQTLNEFARAHTSSTQLQEEL 902
L +P ++ L + S + +D Q T S+ EEL
Sbjct: 752 PLTVPRYQ-----KFPLGDGSSLLLADTLQ--------------------THSSLFLEEL 786
Query: 903 EKVANQIKEEEEKQVVEAEKVVESPDF-----SKDEDYLGKVGMLNGGRRIDYVLQ-EKP 956
E + + ++ P S + + + G +RIDY L +
Sbjct: 787 EMLVPSTPTSTSGAFWKGSELATDPPAQPAAPSTTSEVVKILERWWGTKRIDYSLYCPEA 846
Query: 957 IESFNEYLFALQSHLCYWESEDTALLLLKEIYRTMNISPEQPQ 999
+ +F H YWES D +L+++ I E+PQ
Sbjct: 847 LTAFPTVTLPHLFHASYWESADVVAFILRQV-----IEKERPQ 884
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 60.5 bits (145), Expect = 8e-09
Identities = 61/200 (30%), Positives = 80/200 (40%), Gaps = 27/200 (13%)
Query: 70 TSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQS----GFPKPLTALPFTTG 125
+SI T PQ + + +S P + PL+ AT Q+ P PL A P
Sbjct: 585 SSIATPPPQ-----APPALASPPLQGLPSPPLSPLATPPPQAPPXLALP-PLQAPPSPPA 638
Query: 126 SQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIP--QPGYNPY 183
S +S +PS P AP + + + P P PP P P P P
Sbjct: 639 SPPLSPLATPS-----PQAPNALAVHLLQ-APFSPPPSPPVQAPFSPPASPPVSPSATPP 692
Query: 184 RHTPGSSRANPYIAPPQ------LQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSV 237
P S A P PP + TP P A PP + PP+Q+ PP S P PS+
Sbjct: 693 SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSAT 752
Query: 238 QSPAQQQVPARPGAPSVQVP 257
P +VP AP +QVP
Sbjct: 753 PPP---RVPPLLAAPPLQVP 769
Score = 57.4 bits (137), Expect = 7e-08
Identities = 49/146 (33%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 114 PKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQ 173
P P PF S S SPS + APPS PS P+S P S P
Sbjct: 669 PSPPVQAPF---SPPASPPVSPSATPPSQ-APPSLAAPPLQVPPSPPASPPMSPSATPPP 724
Query: 174 GIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPV 233
P P P P S A+P ++P TP P P + PP+Q+ PP SLP
Sbjct: 725 QAPPPLAAPPLQVPPSPPASPPMSP-----SATPPPRVPPLLAAPPLQVPPSPPASLPMS 779
Query: 234 PSSVQSPAQQQVPARPGAPSVQVPSP 259
P + P Q PA P +PSP
Sbjct: 780 P--LAKPPPQAPPALATPPLQALPSP 803
Score = 56.6 bits (135), Expect = 1e-07
Identities = 69/255 (27%), Positives = 92/255 (36%), Gaps = 40/255 (15%)
Query: 34 NVPFIPVTQASASPASLLLPGEDSTDVGEEDSFLGQTSIHTSAPQTFSYFSQVSSSSDPF 93
++P P Q S SPA + P + + S AP + + + S
Sbjct: 462 SLPASPPLQTSLSPA--VSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLA 519
Query: 94 GNIGQSP---LTTAATSVGQSGFPKPL--TALPFTTGSQDVSNAFSPSISKAQPGAPPSS 148
Q+P LTT S P PL + P TT + +P +A P +
Sbjct: 520 PPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTP 579
Query: 149 LMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPG 208
S + + P PP+ QG+P P +P P +A P +A P LQ P
Sbjct: 580 PPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPP--PQAPPXLALPPLQ--APPS 635
Query: 209 PPAHP--------------------------PPSGPPVQMYQMPPGSLPPVPSSVQSPAQ 242
PPA P PP PPVQ PP S PPV S P+
Sbjct: 636 PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS-PPVSPSATPPS- 693
Query: 243 QQVPARPGAPSVQVP 257
Q P AP +QVP
Sbjct: 694 -QAPPSLAAPPLQVP 707
Score = 53.9 bits (128), Expect = 7e-07
Identities = 67/232 (28%), Positives = 87/232 (37%), Gaps = 22/232 (9%)
Query: 41 TQASASPASLLLPGEDSTDVGEED-SFLGQTSIHT-SAPQTFSYFSQVSSSSDPFGNIGQ 98
TQ+S +P SL P T E+ L + T SAP T + +
Sbjct: 514 TQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPP 573
Query: 99 SPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQ---PGAPPSSLMGINSY 155
SPLTT S P A P S + SP +S P APP +
Sbjct: 574 SPLTTPPPETPSSIATPPPQAPP-ALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQA 632
Query: 156 LPSQPSSLPPSYFGNQPQGIP--------QPGYNPYRHTPGSSRANPYIAPPQLQQCQTP 207
PS P+S P S P Q ++P P + +P +PP
Sbjct: 633 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT-- 690
Query: 208 GPPAHPPPS--GPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVP 257
PP+ PPS PP+Q+ PP S P PS+ P Q P AP +QVP
Sbjct: 691 -PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP---QAPPPLAAPPLQVP 738
Score = 50.4 bits (119), Expect = 8e-06
Identities = 69/236 (29%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 39 PVTQASASPASLLLPGEDSTDVGEEDSFLGQTSIHTSAPQTFSYFSQVS--SSSDPFGNI 96
P QA SP +L + +T +G + + S QT + + S +S+ P
Sbjct: 398 PSLQAPPSPLALSSL-QATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPP 456
Query: 97 GQSPLTTAAT-------SVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSL 149
Q+PL+ A+ S S PLT P S S++ P AP SSL
Sbjct: 457 LQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALS---------SLASHSPQAPLSSL 507
Query: 150 MGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTP-- 207
I L +Q S PPS P + P P + P +APP LQ P
Sbjct: 508 --IMPPLETQSSLAPPS-LQTPPASLTTP---PLENLPS-------LAPPPLQTASAPLT 554
Query: 208 GPPAHPPPSGPPVQMYQMPPGSL----PPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
P PP P + Q PP L P PSS+ +P Q PA P +PSP
Sbjct: 555 TPHLETPPCPAPCPL-QAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSP 609
Score = 47.8 bits (112), Expect = 5e-05
Identities = 53/183 (28%), Positives = 70/183 (38%), Gaps = 20/183 (10%)
Query: 92 PFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTG-SQDVSNAFSPSISKAQPGAPPSSLM 150
PF P++ +AT Q+ P L A P S S SPS + P APP
Sbjct: 676 PFSPPASPPVSPSATPPSQA--PPSLAAPPLQVPPSPPASPPMSPSATPP-PQAPPPLAA 732
Query: 151 GINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPP 210
PS P+S P S P +P P P S A+ ++P Q P
Sbjct: 733 PPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPAL 792
Query: 211 AHPP----PSGP----------PVQMYQMPPGSLPP--VPSSVQSPAQQQVPARPGAPSV 254
A PP PS P P M P + PP P + +P Q P+ P +P++
Sbjct: 793 ATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTL 852
Query: 255 QVP 257
Q P
Sbjct: 853 QAP 855
Score = 45.4 bits (106), Expect = 3e-04
Identities = 65/245 (26%), Positives = 88/245 (35%), Gaps = 27/245 (11%)
Query: 22 LLFSSSATEFSFNVPFIPVTQA--SASP----ASLLLPGEDSTDVGEEDSFLGQTSIHTS 75
L SS S P + T + + SP ASL P ++ + S+ S
Sbjct: 407 LALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPAS 466
Query: 76 APQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSP 135
P S VS S P L++ A+ Q+ PL++L + S+ P
Sbjct: 467 PPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQA----PLSSL-IMPPLETQSSLAPP 521
Query: 136 SISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPY 195
S+ PP+SL L + PS PP Q P P+ TP P
Sbjct: 522 SLQ-----TPPASLT--TPPLENLPSLAPPPL-----QTASAPLTTPHLETPPCPAPCPL 569
Query: 196 IAPPQ---LQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAP 252
APP +TP A PPP PP + P LP P S + Q P P
Sbjct: 570 QAPPSPLTTPPPETPSSIATPPPQAPPA-LASPPLQGLPSPPLSPLATPPPQAPPXLALP 628
Query: 253 SVQVP 257
+Q P
Sbjct: 629 PLQAP 633
Score = 43.1 bits (100), Expect = 0.001
Identities = 51/178 (28%), Positives = 65/178 (36%), Gaps = 22/178 (12%)
Query: 100 PLTTAATSVGQSGFPKPLTALPFTTG-SQDVSNAFSPSISKAQPGAPPSSLMGINSYLPS 158
P++ +AT Q+ P PL A P S S SPS + P PP PS
Sbjct: 715 PMSPSATPPPQA--PPPLAAPPLQVPPSPPASPPMSPSATPP-PRVPPLLAAPPLQVPPS 771
Query: 159 QPSSLPPSYFGNQPQGIP--------QPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPP 210
P+SLP S P P Q +P PG + +P + P + TP P
Sbjct: 772 PPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP-MSPLATPPPQ 830
Query: 211 AHP---------PPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
A P PPS P Q P P P + S + + PG P SP
Sbjct: 831 APPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 888
Score = 42.0 bits (97), Expect = 0.003
Identities = 78/306 (25%), Positives = 114/306 (37%), Gaps = 50/306 (16%)
Query: 1 MAERKPNGGSGGASTSSSGTNLLFSSSATEFSFNVPFIPVTQAS---ASPASLLLPGEDS 57
+AER GG GGA+ S + SA S N P A PA PG S
Sbjct: 58 LAERA--GGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVS 115
Query: 58 TDVGEEDSF----LGQTSIHTSAPQTFSYFSQVSS-------------SSDPFGNIGQSP 100
+ + LGQ + SA +T + + +S P
Sbjct: 116 SPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPA 175
Query: 101 LTTAATSVG-QSGFPKPLTAL---PFTTGSQ-DVSNAFSPSISKAQPGAP--PSSLMGIN 153
+ + + G + G P+P + P T G + VS+A S ++ P A PS+ G+
Sbjct: 176 MARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQ 235
Query: 154 -----SYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRA--NPYIAPPQLQQCQT 206
S S P+ G +G P+ +P + P +A P + PP+
Sbjct: 236 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 295
Query: 207 PGPP-----AHPPPSG-------PPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSV 254
GP A P PSG PP P +LPP P + +P P+ PS+
Sbjct: 296 LGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPP-LATPLPLAPPSPSAPPSL 354
Query: 255 Q-VPSP 259
Q +PSP
Sbjct: 355 QTLPSP 360
>gi|4809279 annexin VII isoform 2 [Homo sapiens]
Length = 488
Score = 56.6 bits (135), Expect = 1e-07
Identities = 79/301 (26%), Positives = 107/301 (35%), Gaps = 42/301 (13%)
Query: 142 PGAPPSSLMGINSYLPS-QPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSS--RANPYIAP 198
PG PP+ Y P+ Q SS PPS P G P G Y P S A Y AP
Sbjct: 4 PGYPPTGYPPFPGYPPAGQESSFPPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
Query: 199 PQLQQCQTPGPPAHPPPSG-------PPVQMYQMPPG-----SLPPVPSSVQSPAQQQVP 246
G P P P G PP Q + +PPG P PS QVP
Sbjct: 64 GGYP--APGGYPGAPQPGGAPSYPGVPPGQGFGVPPGGAGFSGYPQPPSQSYGGGPAQVP 121
Query: 247 ARPGAPSVQVPSPFLLQNQYEPVQPHWFYCKEVEYKQLWMPFSVFDSLNLEEIYNSVQPD 306
G P Q+PS QY QP Y ++ + + VF ++L+ Y+S +
Sbjct: 122 LPGGFPGGQMPS------QYPGGQP--TYPSQIN-TDSFSSYPVFSPVSLD--YSS---E 167
Query: 307 PESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWFYKGDTDSRFIPYTEEFSEKL 366
P +V T G +D IR AE+ R G + + S
Sbjct: 168 PATVTQVTQGTIRPAANFDAIR--------DAEILRKAMKGFGTDEQAIVDVVANRSNDQ 219
Query: 367 EAEYKKAVTTNQWHRRLEFPSGETIVMHNPKVIVQFQPSSVPDEWG---TTQDGQTRPRV 423
+ K A T+ ++ E ++ F P + D W Q T+ RV
Sbjct: 220 RQKIKAAFKTSYGKDLIKDLKSELSGNMEELILALFMPPTYYDAWSLRKAMQGAGTQERV 279
Query: 424 V 424
+
Sbjct: 280 L 280
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 56.2 bits (134), Expect = 1e-07
Identities = 73/272 (26%), Positives = 95/272 (34%), Gaps = 37/272 (13%)
Query: 36 PFIPVTQASASPASLLLPGEDSTDVGEEDSFLGQTSIHTSAP----QTFSYFSQVSSSSD 91
P P QA+A P + E LGQ T + F S
Sbjct: 648 PQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQ 707
Query: 92 PFGNIGQSPLTTAATSVGQSGFPK---PLTALPFTTGS--------QDVSNAFSPSISKA 140
P + P + SV S P P A P G+ S A +P I A
Sbjct: 708 PLS--AEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAA 765
Query: 141 QP--GAPPSSL--------MGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSS 190
P G PSS +G + +LPS + PPS ++PQ + +P P H
Sbjct: 766 APLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPP 825
Query: 191 RANP-----YIAPPQL---QQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQ 242
+A P ++ QL P P A PP P Q P G LPP P S
Sbjct: 826 QAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTS 885
Query: 243 QQVPARPGAPS-VQVPSPFLLQNQYEPVQ-PH 272
V + S + P+P Q Q+ P Q PH
Sbjct: 886 SAVASSSETSSRLPAPTPSDFQLQFPPSQGPH 917
Score = 43.9 bits (102), Expect = 8e-04
Identities = 70/288 (24%), Positives = 103/288 (35%), Gaps = 58/288 (20%)
Query: 6 PNGGSGGASTSSSGTNLLFSSSATEFSFNVPF-------IPVTQASASPASLLLPGEDST 58
PNG GGA+ ++ G + + N P +PV+ AS A P E T
Sbjct: 218 PNGSPGGATAATLGLAPIQVVGQPVMALNTPTSQLLAKQVPVSGYLASAAG---PSEPVT 274
Query: 59 DVGEEDSFLG-----QTSIHTSAPQTF---SYFSQVSSSSDPFGNIGQSPLTTAATSVGQ 110
S G Q ++ + T S F ++S P G PL A +G
Sbjct: 275 LASAGVSPQGAGLVIQKNLSAAVATTLNGNSVFGGAGAASAPTGTPSGQPLAVAP-GLGS 333
Query: 111 SGF----------------PKPLTALP---FTTGSQDVSNAFSPSISKAQPGAPPSSLMG 151
S PKP LP + + + A + + +PGA P
Sbjct: 334 SPLVPAPNVILHRTPTPIQPKPAGVLPPKLYQLTPKPFAPAGATLTIQGEPGALPQQ--- 390
Query: 152 INSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPG--P 209
P P +L G Q + G+ + +AN + PP T G P
Sbjct: 391 -----PKAPQNLTFMAAGKAGQNVVLSGF-----PAPALQANVFKQPP----ATTTGAAP 436
Query: 210 PAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVP 257
P P P+ ++ + GS +P+ P Q Q PGAP+VQ+P
Sbjct: 437 PQPPGALSKPMSVHLLNQGSSIVIPAQHMLPGQNQF-LLPGAPAVQLP 483
Score = 38.1 bits (87), Expect = 0.042
Identities = 39/138 (28%), Positives = 49/138 (35%), Gaps = 24/138 (17%)
Query: 145 PPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRAN----------- 193
PP+S + P QP P S QP P P P H P SS ++
Sbjct: 845 PPASNPAPTAPGPPQPPLRPQS----QPPEGPLP---PAPHLPPSSTSSAVASSSETSSR 897
Query: 194 -PYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAP 252
P P Q P H P+ PP P + PP P PA P
Sbjct: 898 LPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPK 957
Query: 253 SV-----QVPSPFLLQNQ 265
++ QVPS +LQN+
Sbjct: 958 ALLERFHQVPSGIILQNK 975
Score = 33.1 bits (74), Expect = 1.3
Identities = 60/245 (24%), Positives = 82/245 (33%), Gaps = 71/245 (28%)
Query: 47 PASLLLPGEDSTDVGEEDSFLGQTSIHTSAPQTFSYF-----SQVSSSSDPF--GNIGQS 99
PA +LPG++ FL + PQ S Q+ +++ P G + +
Sbjct: 461 PAQHMLPGQNQ--------FLLPGAPAVQLPQQLSALPANVGGQILAAAAPHTGGQLIAN 512
Query: 100 PLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAP-----PSSLMGINS 154
P+ T G PL+ P +A S + Q G P P SL +
Sbjct: 513 PILTNQNLAG------PLSLGPVLAPHSGAHSAHILSAAPIQVGQPALFQMPVSLAAGSL 566
Query: 155 YLPSQPS-------------SLPPSYFG--NQPQGIPQPGYNPYRHTPGSSRANPYIAPP 199
SQP+ +LPPS N P G+ QP TP ++ A P
Sbjct: 567 PTQSQPAPAGPAATTVLQGVTLPPSAVAMLNTPDGLVQPA------TPAAATGE---AAP 617
Query: 200 QLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARP-----GAPSV 254
L P P Q PP P+P +Q P QQ P P P
Sbjct: 618 VLT--------VQPAP--------QAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQA 661
Query: 255 QVPSP 259
P P
Sbjct: 662 TTPQP 666
Score = 31.6 bits (70), Expect = 3.9
Identities = 41/190 (21%), Positives = 67/190 (35%), Gaps = 23/190 (12%)
Query: 86 VSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAF-----SPSISKA 140
+++SS+ G PL+++A P T L G S + S S+S +
Sbjct: 1212 IAASSEGHRLPGHGPLSSSAPGASTQPPPHLPTKLVIRHGGAGGSPSVTWARASSSLSSS 1271
Query: 141 QPGAPPSSLMGINSYLPSQPSSLPP-------SYFGNQPQGIPQPGYNPYRHTPGSSRAN 193
+ +S + + P + PP S G + + + G + H +
Sbjct: 1272 SSSSSAASSLDADEDGPMPSRNRPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVH 1331
Query: 194 PYIAPPQLQQCQTPGP--PAHPPPSG---------PPVQMYQMPPGSLPPVPSSVQSPAQ 242
PP + P P P PPP+G PP + P G+ P P
Sbjct: 1332 QPPPPPATLKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPERKPLGTAPHCPRLPLRKTY 1391
Query: 243 QQVPARPGAP 252
++ PGAP
Sbjct: 1392 RENVGGPGAP 1401
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 56.2 bits (134), Expect = 1e-07
Identities = 49/147 (33%), Positives = 53/147 (36%), Gaps = 27/147 (18%)
Query: 135 PSISKAQPGA--PPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRA 192
PS+ PG PP LM P P SLPP P G+P P P P
Sbjct: 221 PSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPP----PPGGLPLPPMPPTGPAPSGPPG 276
Query: 193 NPYIAPPQLQQCQTPGPPAHPPPSG--PPVQMYQMP-PGSLPPVPS-------------S 236
P + PP P P HPP SG PP P PG PP P
Sbjct: 277 PPQLPPPA-PGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPG 335
Query: 237 VQSPAQQQVPARPG----APSVQVPSP 259
V PA P PG AP V P+P
Sbjct: 336 VHPPAPGVHPPAPGVHPPAPGVHPPAP 362
Score = 44.7 bits (104), Expect = 4e-04
Identities = 41/127 (32%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 143 GAPPSSLMGINSYLPSQPSSLPPSYFGNQP-QGI--PQPGYNPYRHTPGSSRANPYIAPP 199
G PS G P P PP+ + P G+ P PG +P PG P + PP
Sbjct: 268 GPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHP--PAPGVHPPAPGVHPP 325
Query: 200 QLQQCQTPGPPAHPPPSG--PPVQMYQMP-PGSLPPVPSSVQSPAQQQVPARPG----AP 252
P P HPP G PP P PG PP P P+ P PG AP
Sbjct: 326 T-SGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAP 384
Query: 253 SVQVPSP 259
+V +P
Sbjct: 385 AVHPQAP 391
Score = 37.4 bits (85), Expect = 0.071
Identities = 39/124 (31%), Positives = 47/124 (37%), Gaps = 16/124 (12%)
Query: 134 SPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRAN 193
+P + PG P + G++ P P PP G PQ PG +P P
Sbjct: 340 APGVHPPAPGVHPPA-PGVH---PPAPGVHPPPSAGVHPQA---PGVHPA--APAVHPQA 390
Query: 194 PYIAPPQL-QQCQTPGPPAHPP---PSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARP 249
P + PP Q PG PP PS P V + PPG P P V P RP
Sbjct: 391 PGVHPPAPGMHPQAPGVHPQPPGVHPSAPGV--HPQPPGVHPSNP-GVHPPTPMPPMLRP 447
Query: 250 GAPS 253
PS
Sbjct: 448 PLPS 451
Score = 34.3 bits (77), Expect = 0.60
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 35/107 (32%)
Query: 157 PSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPS 216
P P SLP P G+ +P PP L P PP P S
Sbjct: 217 PPAPPSLPAG-----PPGVKRP-------------------PPPLMNGLPPRPPL--PES 250
Query: 217 GPPVQMYQMPPGSLP--PVPSSVQSPAQQQVPAR--PGAPSVQVPSP 259
PP PPG LP P+P + +P+ P + P AP V P+P
Sbjct: 251 LPPP-----PPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAP 292
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 55.5 bits (132), Expect = 3e-07
Identities = 54/152 (35%), Positives = 61/152 (40%), Gaps = 26/152 (17%)
Query: 126 SQDVSNAFSPSISKAQPGAPPSSLMGINSYL-----PSQPSSLPPSYFGNQPQGIPQPG- 179
++DVS SPS+ P P S G N P +P PP GN+PQG P PG
Sbjct: 20 NEDVSQEESPSLIAGNPQGP--SPQGGNKPQGPPPPPGKPQG-PPPQGGNKPQGPPPPGK 76
Query: 180 ------YNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHP-PPSGPPVQMYQMPPGSLPP 232
+P S P PPQ Q GPP P P GPP Q P G PP
Sbjct: 77 PQGPPPQGDKSRSPRSPPGKPQGPPPQGGN-QPQGPPPPPGKPQGPPPQGGNRPQG--PP 133
Query: 233 VPSSVQSPAQQQVPAR-----PGAPSVQVPSP 259
P Q P Q +R PG P Q P P
Sbjct: 134 PPGKPQGPPPQGDKSRSPRSPPGKP--QGPPP 163
Score = 52.0 bits (123), Expect = 3e-06
Identities = 45/130 (34%), Positives = 50/130 (38%), Gaps = 17/130 (13%)
Query: 143 GAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTP-GSSR-------ANP 194
G PP + P PP GNQPQG P P P P G +R P
Sbjct: 79 GPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKP 138
Query: 195 YIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQ-----QVPARP 249
PPQ + ++P P P GPP Q P G PP P Q P Q Q P P
Sbjct: 139 QGPPPQGDKSRSPRSPP-GKPQGPPPQGGNQPQGP-PPPPGKPQGPPPQGGKKPQGPPPP 196
Query: 250 GAPSVQVPSP 259
G P Q P P
Sbjct: 197 GKP--QGPPP 204
Score = 51.6 bits (122), Expect = 4e-06
Identities = 40/117 (34%), Positives = 43/117 (36%), Gaps = 11/117 (9%)
Query: 143 GAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQ 202
G PP + P PP GNQPQG P P P P + P PP
Sbjct: 140 GPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGK-KPQGPPP--- 195
Query: 203 QCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
PG P PPP G + Q PPG P P Q P PG P Q P P
Sbjct: 196 ----PGKPQGPPPQGDKSRSSQSPPGK-PQGPPPQGGNQPQGPPPPPGKP--QGPPP 245
Score = 51.6 bits (122), Expect = 4e-06
Identities = 45/131 (34%), Positives = 47/131 (35%), Gaps = 24/131 (18%)
Query: 143 GAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQ 202
G PP +S P PP GNQPQG P P P P PP
Sbjct: 201 GPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP 260
Query: 203 QCQTPGPPAH----------PP--PSGPPVQMYQMPPGSLPPVPSSVQSP-----AQQQV 245
Q GPPA PP P GPP Q P G PP + Q P Q Q
Sbjct: 261 Q----GPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQG 316
Query: 246 PARP---GAPS 253
P RP G PS
Sbjct: 317 PPRPPQGGRPS 327
Score = 44.3 bits (103), Expect = 6e-04
Identities = 39/117 (33%), Positives = 45/117 (38%), Gaps = 24/117 (20%)
Query: 141 QPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQ 200
QP PP P +P PP GN+PQG P PG G S++ +PP
Sbjct: 229 QPQGPPPP--------PGKPQG-PPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPG 279
Query: 201 LQQCQTPGPPAHPP--PSGPPV------QMYQMPPGSLPPVPSSVQSPAQQQVPARP 249
Q GPP P GPP Q Q PP P P P Q P+RP
Sbjct: 280 KPQ----GPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGP---PRPPQGGRPSRP 329
Score = 35.0 bits (79), Expect = 0.35
Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 157 PSQPSSLPPSYFGNQPQGIPQP-GYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPP 215
P +P PP GN PQG P P G NP + APP Q P PP P
Sbjct: 278 PGKPQG-PPQQEGNNPQGPPPPAGGNPQQPQ----------APPAGQPQGPPRPPQGGRP 326
Query: 216 SGPP 219
S PP
Sbjct: 327 SRPP 330
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 55.5 bits (132), Expect = 3e-07
Identities = 71/271 (26%), Positives = 103/271 (38%), Gaps = 39/271 (14%)
Query: 6 PNGGSGGASTSSS-GTNLLFSSSATEFSFNVP----FIPVTQASASPASLLLPGEDSTDV 60
P SG ++T+SS GT + S + +V P + SA P + + G S+ V
Sbjct: 771 PTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPI--GNLSSPV 828
Query: 61 GE-EDSFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTA 119
E SFL + S+ + + + P G +P +A T + PK +T
Sbjct: 829 SPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKG----APTPSAVTPLS----PKGVTL 880
Query: 120 LPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIP--- 176
P T + V N P A P + + + S P + + P P+GIP
Sbjct: 881 PPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPA------PKGIPASP 934
Query: 177 --QPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPS------GPPVQMYQMPPG 228
+ P TP S + P P+ P PPA PPS P + PP
Sbjct: 935 SPKGAPTPPAATPPSPKGGPATPSPKW----APTPPAATPPSPKGGPATPSPKGAPTPPA 990
Query: 229 SLPPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
+ PP P PA P P+V PSP
Sbjct: 991 ATPPSPKG--GPATPSPKGAPTPPAVTPPSP 1019
Score = 54.3 bits (129), Expect = 6e-07
Identities = 50/173 (28%), Positives = 64/173 (36%), Gaps = 17/173 (9%)
Query: 99 SPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPS 158
+P T AAT PK A P G+ A PS K P PP P+
Sbjct: 1217 APTTPAATPPS----PKGGLATPSPKGAPTTPAATPPS-PKGGPATPPPK------GAPT 1265
Query: 159 QPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGP 218
P++ PPS G + NP TP S + P +PP+ P PPA PPS
Sbjct: 1266 PPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK----GAPTPPAATPPS-- 1319
Query: 219 PVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQP 271
P PP P P +V P+ + P P P ++ P P
Sbjct: 1320 PKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPP 1372
Score = 47.8 bits (112), Expect = 5e-05
Identities = 53/181 (29%), Positives = 66/181 (36%), Gaps = 28/181 (15%)
Query: 87 SSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPP 146
S ++ PF +P AAT G P A P G+ A PS K P P
Sbjct: 1022 SPAATPFPKGASTP--PAATPPSPKGSP---AATPLPKGAPTTPAATLPS-PKGGPATP- 1074
Query: 147 SSLMGINSYLPSQPSSLPPSYFGN----QPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQ 202
SL G P+ P++ PPS G P+G P P G P+ P
Sbjct: 1075 -SLKGA----PTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTP 1129
Query: 203 QCQTPGPP---AHPPPSGPPVQMYQMPPGSLPPVP-SSVQSPAQQQVPARPGAPSVQVPS 258
P P A PPP G P P + PP P + +P + P P A PS
Sbjct: 1130 AATPPSPKGGLATPPPKGAPT-----TPAATPPSPKGGLATPPPKGAPTTPAATP---PS 1181
Query: 259 P 259
P
Sbjct: 1182 P 1182
Score = 47.0 bits (110), Expect = 9e-05
Identities = 52/173 (30%), Positives = 67/173 (38%), Gaps = 33/173 (19%)
Query: 99 SPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPS 158
+P AAT G P A P G+ A +P K P A P +
Sbjct: 985 APTPPAATPPSPKGGP----ATPSPKGAP-TPPAVTPPSPKGSPAATP-----FPKGAST 1034
Query: 159 QPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAP--PQLQQCQTP--------- 207
P++ PPS G+ P P P P TP ++ +P P P L+ TP
Sbjct: 1035 PPAATPPSPKGS-PAATPLPKGAPT--TPAATLPSPKGGPATPSLKGAPTPPAATPPSPK 1091
Query: 208 GPPAHPPPSGPPVQMYQMPPGSLPPVP-SSVQSPAQQQVPARPGAPSVQVPSP 259
G PA P P G P MPP + PP P + +P + P P A PSP
Sbjct: 1092 GGPATPSPKGAP-----MPPAATPPSPKGGLATPPHKGAPTTPAATP---PSP 1136
Score = 47.0 bits (110), Expect = 9e-05
Identities = 59/213 (27%), Positives = 74/213 (34%), Gaps = 34/213 (15%)
Query: 70 TSIHTSAPQTFSYFSQVSSSSDPFGNIGQ-----SPLTTAATSVGQSGF-----PKPLTA 119
T H AP T ++ P G + +P T AAT G PK
Sbjct: 1119 TPPHKGAPTT-----PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPT 1173
Query: 120 LPFTTGSQDVSNAFSPSISKAQ--PGA-PPSSLMGINSY----LPSQPSSLPPSYFGNQP 172
P T +PS A P A PPS G+ + P+ P++ PPS G
Sbjct: 1174 TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLA 1233
Query: 173 QGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPS------GPPVQMYQMP 226
P+ TP S + P PP+ P PPA PPS PP + P
Sbjct: 1234 TPSPKGAPTTPAATPPSPKGGPATPPPK----GAPTPPAATPPSLKGGLATPPHKGAPNP 1289
Query: 227 PGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
PP P PA P P+ PSP
Sbjct: 1290 AVVTPPSPKG--GPATSPPKGAPTPPAATPPSP 1320
Score = 39.7 bits (91), Expect = 0.014
Identities = 46/169 (27%), Positives = 60/169 (35%), Gaps = 25/169 (14%)
Query: 99 SPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPS 158
+P A T G P A PF G+ A PS K P A P + P+
Sbjct: 1008 APTPPAVTPPSPKGSP---AATPFPKGASTPPAATPPS-PKGSPAATP-----LPKGAPT 1058
Query: 159 QPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQ---LQQCQTPGPP----A 211
P++ PS G + P TP S + P P+ + TP P A
Sbjct: 1059 TPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLA 1118
Query: 212 HPPPSGPPVQMYQMPPGSLPPVP-SSVQSPAQQQVPARPGAPSVQVPSP 259
PP G P P + PP P + +P + P P A PSP
Sbjct: 1119 TPPHKGAPT-----TPAATPPSPKGGLATPPPKGAPTTPAATP---PSP 1159
Score = 36.2 bits (82), Expect = 0.16
Identities = 41/160 (25%), Positives = 56/160 (35%), Gaps = 19/160 (11%)
Query: 104 AATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSL 163
A V S PK A P G+ + A PS K P P S I
Sbjct: 1480 APKQVATSSSPKKAPATPAPMGAPTLP-AVIPSSPKEVPATPSSRRDPIAPTATLLSKKT 1538
Query: 164 PPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMY 223
P + P+ P T S + P I P+ + P P+ S PP
Sbjct: 1539 PATL-------APKEALIPPAMTVPSPKKTPAIPTPK----EAPATPSSKEASSPPAVTP 1587
Query: 224 QMPPGSLPP----VPSSVQSPAQQQVPARPGAPSVQVPSP 259
G+ P +P +V SP+ ++ P P+V PSP
Sbjct: 1588 STYKGAPSPKELLIPPAVTSPSPKEAPT---PPAVTPPSP 1624
Score = 35.8 bits (81), Expect = 0.21
Identities = 45/177 (25%), Positives = 60/177 (33%), Gaps = 20/177 (11%)
Query: 99 SPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSIS--------KAQPG----APP 146
+P T AAT G P A P G+ A PS+ K P PP
Sbjct: 1240 APTTPAATPPSPKGGP----ATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPP 1295
Query: 147 SSLMGINSY----LPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQ 202
S G + P+ P++ PPS G+ P+ P TP S + P +
Sbjct: 1296 SPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPS 1355
Query: 203 QCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
P P+ PP G PS + PA P +P+V SP
Sbjct: 1356 SKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSP 1412
Score = 32.0 bits (71), Expect = 3.0
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 196 IAPPQLQQCQTPGPPAH-----PPPSGPPVQMYQMPPGSLPPVPSSVQS--PAQQQVPAR 248
+APP+ + TP A P P V PP SLP PS V + P QQ +P+
Sbjct: 1762 LAPPE-SKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSS 1820
Query: 249 PG 250
PG
Sbjct: 1821 PG 1822
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 55.1 bits (131), Expect = 3e-07
Identities = 63/241 (26%), Positives = 91/241 (37%), Gaps = 33/241 (13%)
Query: 25 SSSATEFSFNVPFIPVTQASASPASLLLPGEDSTDVGEEDSFLGQTSIHTSAPQTFSYFS 84
SS + + +P P + SA P+ LP +T + + LG ++ T S+
Sbjct: 328 SSLTCQLATPLPLAPPSP-SAPPSLQTLPSPPATPPSQATTSLGSPTLQA----THSFLP 382
Query: 85 QVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGA 144
S P SPL T + PL A P S +S +PS P A
Sbjct: 383 -----SPPL-----SPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPS-----PQA 427
Query: 145 PPSSLMGINSYLPSQPSSLPPSYFGNQPQGIP--QPGYNPYRHTPGSSRANPYIAPPQ-- 200
P + + + P P PP P P P P P S A P PP
Sbjct: 428 PNALAVHLLQ-APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 486
Query: 201 ----LQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQV 256
+ TP P A PP + PP+Q+ + P P P ++ +P Q +P+ P + Q
Sbjct: 487 ASPPMSPSATPPPQAPPPLAAPPLQLAKPP----PQAPPALATPPLQALPSPPASFPGQA 542
Query: 257 P 257
P
Sbjct: 543 P 543
Score = 51.2 bits (121), Expect = 5e-06
Identities = 75/300 (25%), Positives = 106/300 (35%), Gaps = 50/300 (16%)
Query: 2 AERKPNGGSG-----GASTSSSGTNLLFSSSATEFSFNVPFIPVTQASASPASL--LLPG 54
A R+P+ G G S SSS T L + + + P P + P L L P
Sbjct: 224 ARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPP 283
Query: 55 EDSTDVGEEDSFLGQTS------------IHTSAPQTFSYFSQVSSSSDPFGNIGQSPLT 102
+ + + LG S + + AP T SS + +PL
Sbjct: 284 QVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLA----TPLP 339
Query: 103 TAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSS 162
A S + L + P T SQ ++ SP++ P L + + P P +
Sbjct: 340 LAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPA 399
Query: 163 L--PPSYFGNQPQGIP--QPGYNPYRHTPGSSRAN----PYIAPPQLQQCQTP-GPPAHP 213
L PP P P P P P + + P+ +PP Q P PPA P
Sbjct: 400 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPF-SPPPSPPVQAPFSPPASP 458
Query: 214 PPS--------------GPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
P S PP+Q+ PP S P PS+ P Q P AP +Q+ P
Sbjct: 459 PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP---QAPPPLAAPPLQLAKP 515
Score = 50.1 bits (118), Expect = 1e-05
Identities = 54/176 (30%), Positives = 70/176 (39%), Gaps = 29/176 (16%)
Query: 94 GNIGQSPLTTAATSVG-QSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGI 152
G + SPL T + S QS P L A P ++ S A ++ P APPS
Sbjct: 297 GPLSSSPLATPSPSAALQSQAPPTLPATPHSS-SLTCQLATPLPLAPPSPSAPPSL---- 351
Query: 153 NSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAH 212
LPS P++ PPS Q G +P + ++ P L TP P A
Sbjct: 352 -QTLPSPPAT-PPS------QATTSLG------SPTLQATHSFLPSPPLSPLATPPPQAP 397
Query: 213 PPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQ--------QVPARPGAPSVQVPSPF 260
P + PP+Q PP S P P + SP Q P P PS V +PF
Sbjct: 398 PALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSP-PPSPPVQAPF 452
Score = 49.3 bits (116), Expect = 2e-05
Identities = 52/170 (30%), Positives = 64/170 (37%), Gaps = 32/170 (18%)
Query: 114 PKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQ 173
P P PF S S SPS + APPS PS P+S P S P
Sbjct: 444 PSPPVQAPF---SPPASPPVSPSATPPSQ-APPSLAAPPLQVPPSPPASPPMSPSATPPP 499
Query: 174 GIPQP-GYNPYRHTPGSSRANPYIAPPQLQQCQTP------------------GPPAHPP 214
P P P + +A P +A P LQ +P P A PP
Sbjct: 500 QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPP 559
Query: 215 PSGPPV---QMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFL 261
P PPV + Q+PP PP ++Q+P + P PG P V P L
Sbjct: 560 PQAPPVLAAPLLQVPPS--PPASPTLQAPRR---PPTPG-PDTSVSGPRL 603
Score = 42.0 bits (97), Expect = 0.003
Identities = 45/173 (26%), Positives = 59/173 (34%), Gaps = 9/173 (5%)
Query: 92 PFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTG-SQDVSNAFSPSISKAQPGAPPSSLM 150
PF P++ +AT Q+ P L A P S S SPS + PP +
Sbjct: 451 PFSPPASPPVSPSATPPSQA--PPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 508
Query: 151 GINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRAN----PYIAPPQLQQCQT 206
+ L P PP+ Q +P P + P S A+ P PP
Sbjct: 509 PLQ--LAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL 566
Query: 207 PGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
P PPS P Q P P P + S + + PG P SP
Sbjct: 567 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 619
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 55.1 bits (131), Expect = 3e-07
Identities = 54/159 (33%), Positives = 63/159 (39%), Gaps = 35/159 (22%)
Query: 126 SQDVSNAFSPSISKAQPGAPPSSLMGINSYL-----PSQPSSLPPSYFGNQPQGIPQPGY 180
++DVS SPS+ P P S G N P +P PP GN+PQG P PG
Sbjct: 20 NEDVSQEESPSLIAGNPQGP--SPQGGNKPQGPPPPPGKPQG-PPPQGGNKPQGPPPPG- 75
Query: 181 NPYRHTPGSSRANPYIAPPQLQQCQTP------GPPAH----------PP--PSGPPVQM 222
P P ++ +PP Q P GPPA PP P GPP Q
Sbjct: 76 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQE 135
Query: 223 YQMPPGSLPPVPSSVQSP-----AQQQVPARP---GAPS 253
P G PP + Q P Q Q P RP G PS
Sbjct: 136 GNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPS 174
Score = 35.4 bits (80), Expect = 0.27
Identities = 32/114 (28%), Positives = 40/114 (35%), Gaps = 21/114 (18%)
Query: 147 SSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQT 206
SS +N + + S PS PQG G N + P PP
Sbjct: 14 SSAQNLNEDVSQEES---PSLIAGNPQGPSPQGGNKPQGPP----------PP------- 53
Query: 207 PGPPAHPPPSGPPVQMYQMPPGSLP-PVPSSVQSPAQQQVPARPGAPSVQVPSP 259
PG P PPP G PPG P P +S + + P +P P Q P
Sbjct: 54 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKP 107
Score = 35.0 bits (79), Expect = 0.35
Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 157 PSQPSSLPPSYFGNQPQGIPQP-GYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPP 215
P +P PP GN PQG P P G NP + APP Q P PP P
Sbjct: 125 PGKPQG-PPQQEGNNPQGPPPPAGGNPQQPQ----------APPAGQPQGPPRPPQGGRP 173
Query: 216 SGPP 219
S PP
Sbjct: 174 SRPP 177
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 55.1 bits (131), Expect = 3e-07
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 24/160 (15%)
Query: 127 QDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSS-------LPPSYFGNQPQGIPQ-- 177
++ S++ S + +Q APP S+ P P PP P G+P
Sbjct: 375 KEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGP 434
Query: 178 -PGYNPYRHTPGSSRAN---PYIAPPQLQQCQTPGPPAHPPPS--------GPPVQM-YQ 224
PG P+ PG P + PP + PGPP PPP GPP ++
Sbjct: 435 PPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPP 494
Query: 225 MPPGSLPPVPSSVQSPAQQQV-PARPGA-PSVQVPSPFLL 262
PPG PP P ++ P + PA PG P +P+P +L
Sbjct: 495 APPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLPNPGVL 534
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 53.5 bits (127), Expect = 1e-06
Identities = 68/260 (26%), Positives = 100/260 (38%), Gaps = 46/260 (17%)
Query: 10 SGGASTSSSGTNLLFSSSATEFSFNVPFIPVTQASASPASLLLPGEDSTDVGEEDSFLGQ 69
+GGA T S F SS+ + S V P + +S S +S PG
Sbjct: 475 AGGAPTVFS-----FGSSSLKSSATVTGEPPSYSSGSDSSKAAPGP-------------- 515
Query: 70 TSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTGSQDV 129
P TFS+ +S P + A+ S G SGF L + P V
Sbjct: 516 ------GPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTP-------V 562
Query: 130 SNAFSPSISKAQPGAPPSS---LMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHT 186
+ +P+I+ +P PPS+ + ++ + +S P S + P P + +
Sbjct: 563 PSVSAPNIA-MKPSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAAS 621
Query: 187 PGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQ-SPAQQQV 245
S P APP ++ P PSG Q GS PVPS VQ SP
Sbjct: 622 GPLSHPTPLSAPPSSVPLKS---SVLPSPSGRSAQ------GSSSPVPSMVQKSPRITPP 672
Query: 246 PARPGAPSVQVPSPFLLQNQ 265
A+PG+P + P + + Q
Sbjct: 673 AAKPGSPQAKSLQPAVAEKQ 692
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 53.5 bits (127), Expect = 1e-06
Identities = 59/222 (26%), Positives = 83/222 (37%), Gaps = 32/222 (14%)
Query: 44 SASPASLLLPGEDSTDVGEEDSFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTT 103
SA P+ LP +T + + LG ++ T S+ S P SPL T
Sbjct: 307 SAPPSLQTLPSPPATPPSQATTSLGSPTLQA----THSFLP-----SPPL-----SPLAT 352
Query: 104 AATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSL 163
+ PL A P S +S +PS P AP + + + P P
Sbjct: 353 PPPQAPPALALPPLQAPPSPPASPPLSPLATPS-----PQAPNALAVHLLQ-APFSPPPS 406
Query: 164 PPSYFGNQPQGIP--QPGYNPYRHTPGSSRANPYIAPPQ------LQQCQTPGPPAHPPP 215
PP P P P P P S A P PP + TP P A PP
Sbjct: 407 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL 466
Query: 216 SGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVP 257
+ PP+Q+ + P P P ++ +P Q +P+ P + Q P
Sbjct: 467 AAPPLQLAKPP----PQAPPALATPPLQALPSPPASFPGQAP 504
Score = 50.8 bits (120), Expect = 6e-06
Identities = 54/193 (27%), Positives = 73/193 (37%), Gaps = 31/193 (16%)
Query: 94 GNIGQSPLTTAATSVGQSGFPKP----LTALPFTTGSQDVSNAFSPSISKAQPGAPPSSL 149
G + SPL T + S S P L + P T SQ ++ SP++ P L
Sbjct: 288 GPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPL 347
Query: 150 MGINSYLPSQPSSL--PPSYFGNQPQGIP--QPGYNPYRHTPGSSRAN----PYIAPPQL 201
+ + P P +L PP P P P P P + + P+ +PP
Sbjct: 348 SPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPF-SPPPS 406
Query: 202 QQCQTP-GPPAHPPPS--------------GPPVQMYQMPPGSLPPVPSSVQSPAQQQVP 246
Q P PPA PP S PP+Q+ PP S P PS+ P Q P
Sbjct: 407 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP---QAP 463
Query: 247 ARPGAPSVQVPSP 259
AP +Q+ P
Sbjct: 464 PPLAAPPLQLAKP 476
Score = 49.3 bits (116), Expect = 2e-05
Identities = 52/170 (30%), Positives = 64/170 (37%), Gaps = 32/170 (18%)
Query: 114 PKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQ 173
P P PF S S SPS + APPS PS P+S P S P
Sbjct: 405 PSPPVQAPF---SPPASPPVSPSATPPSQ-APPSLAAPPLQVPPSPPASPPMSPSATPPP 460
Query: 174 GIPQP-GYNPYRHTPGSSRANPYIAPPQLQQCQTP------------------GPPAHPP 214
P P P + +A P +A P LQ +P P A PP
Sbjct: 461 QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPP 520
Query: 215 PSGPPV---QMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFL 261
P PPV + Q+PP PP ++Q+P + P PG P V P L
Sbjct: 521 PQAPPVLAAPLLQVPPS--PPASPTLQAPRR---PPTPG-PDTSVSGPRL 564
Score = 47.8 bits (112), Expect = 5e-05
Identities = 72/282 (25%), Positives = 97/282 (34%), Gaps = 25/282 (8%)
Query: 2 AERKPNGGSG-----GASTSSSGTNLLFSSSATEFSFNVPFIPVTQASASPASLLLPGED 56
A R+P+ G G S SSS T L + + + P P + P L
Sbjct: 215 ARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPP 274
Query: 57 STDVGEEDSFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTT----AATSVGQ-- 110
+D+ + +S T S + S S+ P SP T A TS+G
Sbjct: 275 QVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPT 334
Query: 111 -----SGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSS-LMGINSYLPSQPSSLP 164
S P P + P T A + +A P P S L + + P P++L
Sbjct: 335 LQATHSFLPSPPLS-PLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALA 393
Query: 165 ----PSYFGNQPQGIPQPGYNPYRHTPGSSRANPYI-APPQLQQ--CQTPGPPAHPPPSG 217
+ F P Q ++P P S A P APP L Q P P PP
Sbjct: 394 VHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMS 453
Query: 218 PPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
P P L P + P Q PA P +PSP
Sbjct: 454 PSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSP 495
Score = 45.8 bits (107), Expect = 2e-04
Identities = 56/200 (28%), Positives = 75/200 (37%), Gaps = 44/200 (22%)
Query: 86 VSSSSDPFGNIGQSPLTTAAT--SVGQSGFPKP--LTAL---PFTTGSQDVSNAFSP--- 135
+SSS+ P + +S + T + PKP L AL T +D + A P
Sbjct: 233 LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 292
Query: 136 -SISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRH------TPG 188
++ P APPS PS P SL Q +P P P +P
Sbjct: 293 SPLATPSPSAPPS---------PSAPPSL---------QTLPSPPATPPSQATTSLGSPT 334
Query: 189 SSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQ----- 243
+ ++ P L TP P A P + PP+Q PP S P P + SP
Sbjct: 335 LQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 394
Query: 244 ---QVPARPGAPSVQVPSPF 260
Q P P PS V +PF
Sbjct: 395 HLLQAPFSP-PPSPPVQAPF 413
Score = 42.0 bits (97), Expect = 0.003
Identities = 45/173 (26%), Positives = 59/173 (34%), Gaps = 9/173 (5%)
Query: 92 PFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTG-SQDVSNAFSPSISKAQPGAPPSSLM 150
PF P++ +AT Q+ P L A P S S SPS + PP +
Sbjct: 412 PFSPPASPPVSPSATPPSQA--PPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 469
Query: 151 GINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRAN----PYIAPPQLQQCQT 206
+ L P PP+ Q +P P + P S A+ P PP
Sbjct: 470 PLQ--LAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL 527
Query: 207 PGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
P PPS P Q P P P + S + + PG P SP
Sbjct: 528 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 580
>gi|4502111 annexin VII isoform 1 [Homo sapiens]
Length = 466
Score = 53.5 bits (127), Expect = 1e-06
Identities = 48/145 (33%), Positives = 54/145 (37%), Gaps = 17/145 (11%)
Query: 142 PGAPPSSLMGINSYLPS-QPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSS--RANPYIAP 198
PG PP+ Y P+ Q SS PPS P G P G Y P S A Y AP
Sbjct: 4 PGYPPTGYPPFPGYPPAGQESSFPPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
Query: 199 PQLQQCQTPGPPAHPPPSG-------PPVQMYQMPPG-----SLPPVPSSVQSPAQQQVP 246
G P P P G PP Q + +PPG P PS QVP
Sbjct: 64 GGYP--APGGYPGAPQPGGAPSYPGVPPGQGFGVPPGGAGFSGYPQPPSQSYGGGPAQVP 121
Query: 247 ARPGAPSVQVPSPFLLQNQYEPVQP 271
G P Q+PS + P QP
Sbjct: 122 LPGGFPGGQMPSQYPGGQPTYPSQP 146
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 53.1 bits (126), Expect = 1e-06
Identities = 56/192 (29%), Positives = 71/192 (36%), Gaps = 14/192 (7%)
Query: 81 SYFSQVSSSSDPFGNIGQSPLTTAATSVG----QSGFPKPLTALPFTTGSQDVSN---AF 133
S F Q + G G S + A+ G +SG LTA+ S+ +S A
Sbjct: 206 STFDQTAERDSGLGATGGSVVVVVASMQGAHGPESGTDSSLTAVSQLPPSEKMSQPTPAQ 265
Query: 134 SPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRAN 193
S S QP PP + G + + P + G QP P PG
Sbjct: 266 PQSFSVGQPQPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLP 325
Query: 194 PY---IAPPQLQQCQTPGPPAHPPPSGPPVQMY----QMPPGSLPPVPSSVQSPAQQQVP 246
P +A P + PGP P + P Q Q+PPG L PV S QS QQ
Sbjct: 326 PTNVTLAQPAMSLPPQPGPAVGAPAAQQPQQFAYPQPQIPPGHLLPVQPSGQSEYLQQHV 385
Query: 247 ARPGAPSVQVPS 258
A PS PS
Sbjct: 386 AGLQPPSPAQPS 397
Score = 37.4 bits (85), Expect = 0.071
Identities = 39/165 (23%), Positives = 53/165 (32%), Gaps = 27/165 (16%)
Query: 98 QSPLTTAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPG---APPSSLMGINS 154
Q P +S G + P LP TG S + +QP AP +
Sbjct: 389 QPPSPAQPSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPRTGPAQGGQ 448
Query: 155 YLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPP 214
P QP+ +PP+ G G+ QP P + P PP P
Sbjct: 449 VAPCQPTGVPPATVG----GVVQPCLGP------AGAGQPQSVPP--------------P 484
Query: 215 PSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSP 259
G + +P G VP PA P+ P + V P
Sbjct: 485 QMGGSGPLSAVPGGPHAVVPGVPNVPAAVPAPSVPSVSTTSVTMP 529
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 52.8 bits (125), Expect = 2e-06
Identities = 58/206 (28%), Positives = 78/206 (37%), Gaps = 32/206 (15%)
Query: 71 SIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTGSQDVS 130
SI + P+ SQ + P Q+P T A Q +P T + V
Sbjct: 238 SISSQQPEKIK--SQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVK 295
Query: 131 NAF----SPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHT 186
+ P I + PG PP+ G + SQP P QP G+ +P
Sbjct: 296 PSLPSPSKPPIQQPTPGKPPAQQPG---HEKSQPGPAKPPA---QPSGLTKP----LAQQ 345
Query: 187 PGSSRANPYIAPPQLQQCQTPGPPAHP-PPSGPPVQMY--------QMPPGSLPPVPSSV 237
PG+ + P + PP T PPA P P+ PP Q Q P +L P
Sbjct: 346 PGTVK--PPVQPPG-----TTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVG 398
Query: 238 QSPAQQQVPARPGAPSVQVPSPFLLQ 263
++PAQQ PA+P V P P Q
Sbjct: 399 KTPAQQPGPAKPPTQQVGTPKPLAQQ 424
Score = 51.2 bits (121), Expect = 5e-06
Identities = 49/168 (29%), Positives = 62/168 (36%), Gaps = 18/168 (10%)
Query: 110 QSGFPKPLTALPFTTGSQDVSNAFSPSISKAQ---PGAPPSSLMGINSYLPSQPSSLPPS 166
Q G PKPL P G Q + A P+ + Q PG P+ G Q P
Sbjct: 414 QVGTPKPLAQQP---GLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKP- 469
Query: 167 YFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMP 226
P +P P P + PG ++ P Q PG PP P +
Sbjct: 470 -----PSQLPGPAKPPPQQ-PGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQ 523
Query: 227 PGSLPP---VPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQP 271
PGS P P S + AQQ PA+P A Q P +P+QP
Sbjct: 524 PGSTKPPSQQPGSAKPSAQQPSPAKPSAQ--QSTKPVSQTGSGKPLQP 569
Score = 39.7 bits (91), Expect = 0.014
Identities = 54/202 (26%), Positives = 65/202 (32%), Gaps = 48/202 (23%)
Query: 103 TAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLM---GINSYLPSQ 159
T V G KP A P S S QPG P +L G+ Q
Sbjct: 348 TVKPPVQPPGTTKP-PAQPLGPAKPPAQQTGSEKPSSEQPG--PKALAQPPGVGKTPAQQ 404
Query: 160 PS-SLPPSYFGNQPQGIPQ-PGYNPYRHTPGSSRANPYIAPPQLQQCQTPGP-------- 209
P + PP+ P+ + Q PG PG ++ P Q GP
Sbjct: 405 PGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQT 464
Query: 210 -----------PAHPPPSGP-PVQMYQMPPGSLPP---VPSSVQSPAQQQVPARP----- 249
PA PPP P P + PGS P P S + P QQ PA+P
Sbjct: 465 GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQP 524
Query: 250 ------------GAPSVQVPSP 259
PS Q PSP
Sbjct: 525 GSTKPPSQQPGSAKPSAQQPSP 546
Score = 38.9 bits (89), Expect = 0.024
Identities = 47/158 (29%), Positives = 56/158 (35%), Gaps = 24/158 (15%)
Query: 94 GNIGQSPLTTAATSVGQSGFPKPLTALPFTTGS--QDVSNAFSPSISKAQPGA--PPSSL 149
G I TS Q+G KP + LP Q A P QPG+ PPS
Sbjct: 447 GKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPP---QQPGSAKPPSQQ 503
Query: 150 MGINSYLPSQPSSLPPSYFGNQPQGIPQPGYN-PYRHTPGSSRANPYIAPPQLQQCQTPG 208
G P QP PS PQ QPG P PGS++ + P Q
Sbjct: 504 PGSTKPPPQQPGPAKPS-----PQ---QPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQST 555
Query: 209 PPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVP 246
P SG P+Q P V S + P Q +P
Sbjct: 556 KPVSQTGSGKPLQP--------PTVSPSAKQPPSQGLP 585
Score = 37.4 bits (85), Expect = 0.071
Identities = 46/193 (23%), Positives = 66/193 (34%), Gaps = 22/193 (11%)
Query: 68 GQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTGSQ 127
G S P S+ + +P Q A Q KP T L + S
Sbjct: 714 GSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDL--VSSSS 771
Query: 128 DVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQP---QGIPQPGYN--- 181
+ PS SK Q A + + + S PP+ P + IP+P +
Sbjct: 772 ATTKPDIPS-SKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKI 830
Query: 182 -----PYRHTPGSSRANPYIAPPQLQQCQT---PGPPAHPPPSGPPVQMYQMPPGSLPPV 233
P + G + +P + ++ QT P P A P P G P PPG P
Sbjct: 831 ISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPT-----PPGPRPTA 885
Query: 234 PSSVQSPAQQQVP 246
+V +P Q P
Sbjct: 886 GQTVPTPQQSPKP 898
Score = 32.3 bits (72), Expect = 2.3
Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 11/120 (9%)
Query: 136 SISKAQPGAPPSSLMGINSYLPSQPSSLPPSYF-GNQPQGIPQPGYNPYRHTPGSS---- 190
S+S+ PPSS++ + L +YF + G +P +P S
Sbjct: 2334 SLSETVFDHPPSSVIAL-----PMKEQLSTTYFTSGETFGQEKPASQLPSGSPSVSSLPA 2388
Query: 191 RANPYIAPPQLQ-QCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARP 249
+ P+ L Q P PP PPP PP PP P P P ++ A P
Sbjct: 2389 KPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASP 2448
Score = 32.0 bits (71), Expect = 3.0
Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 34/142 (23%)
Query: 127 QDVSNAFSPSIS------KAQPGAPPSS----LMGINSYLPSQPSSLPPSYFGNQPQGIP 176
Q+ S FS ++ K+QP P + L G + + SQ S+L + QP
Sbjct: 899 QEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLIST--AGQPGPHS 956
Query: 177 QPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLP--PVP 234
Q G PG AP + Q P P P GPP Q PP PV
Sbjct: 957 QSG-------PG--------APMK----QAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVK 997
Query: 235 SSVQSPAQQQV-PARPGAPSVQ 255
++PA +++ P AP+V+
Sbjct: 998 KETKAPAAEKLEPKAEQAPTVK 1019
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 52.8 bits (125), Expect = 2e-06
Identities = 58/206 (28%), Positives = 78/206 (37%), Gaps = 32/206 (15%)
Query: 71 SIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTGSQDVS 130
SI + P+ SQ + P Q+P T A Q +P T + V
Sbjct: 238 SISSQQPEKIK--SQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVK 295
Query: 131 NAF----SPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQPQGIPQPGYNPYRHT 186
+ P I + PG PP+ G + SQP P QP G+ +P
Sbjct: 296 PSLPSPSKPPIQQPTPGKPPAQQPG---HEKSQPGPAKPPA---QPSGLTKP----LAQQ 345
Query: 187 PGSSRANPYIAPPQLQQCQTPGPPAHP-PPSGPPVQMY--------QMPPGSLPPVPSSV 237
PG+ + P + PP T PPA P P+ PP Q Q P +L P
Sbjct: 346 PGTVK--PPVQPPG-----TTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVG 398
Query: 238 QSPAQQQVPARPGAPSVQVPSPFLLQ 263
++PAQQ PA+P V P P Q
Sbjct: 399 KTPAQQPGPAKPPTQQVGTPKPLAQQ 424
Score = 51.2 bits (121), Expect = 5e-06
Identities = 49/168 (29%), Positives = 62/168 (36%), Gaps = 18/168 (10%)
Query: 110 QSGFPKPLTALPFTTGSQDVSNAFSPSISKAQ---PGAPPSSLMGINSYLPSQPSSLPPS 166
Q G PKPL P G Q + A P+ + Q PG P+ G Q P
Sbjct: 414 QVGTPKPLAQQP---GLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKP- 469
Query: 167 YFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMP 226
P +P P P + PG ++ P Q PG PP P +
Sbjct: 470 -----PSQLPGPAKPPPQQ-PGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQ 523
Query: 227 PGSLPP---VPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQP 271
PGS P P S + AQQ PA+P A Q P +P+QP
Sbjct: 524 PGSTKPPSQQPGSAKPSAQQPSPAKPSAQ--QSTKPVSQTGSGKPLQP 569
Score = 39.7 bits (91), Expect = 0.014
Identities = 54/202 (26%), Positives = 65/202 (32%), Gaps = 48/202 (23%)
Query: 103 TAATSVGQSGFPKPLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLM---GINSYLPSQ 159
T V G KP A P S S QPG P +L G+ Q
Sbjct: 348 TVKPPVQPPGTTKP-PAQPLGPAKPPAQQTGSEKPSSEQPG--PKALAQPPGVGKTPAQQ 404
Query: 160 PS-SLPPSYFGNQPQGIPQ-PGYNPYRHTPGSSRANPYIAPPQLQQCQTPGP-------- 209
P + PP+ P+ + Q PG PG ++ P Q GP
Sbjct: 405 PGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQT 464
Query: 210 -----------PAHPPPSGP-PVQMYQMPPGSLPP---VPSSVQSPAQQQVPARP----- 249
PA PPP P P + PGS P P S + P QQ PA+P
Sbjct: 465 GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQP 524
Query: 250 ------------GAPSVQVPSP 259
PS Q PSP
Sbjct: 525 GSTKPPSQQPGSAKPSAQQPSP 546
Score = 38.9 bits (89), Expect = 0.024
Identities = 47/158 (29%), Positives = 56/158 (35%), Gaps = 24/158 (15%)
Query: 94 GNIGQSPLTTAATSVGQSGFPKPLTALPFTTGS--QDVSNAFSPSISKAQPGA--PPSSL 149
G I TS Q+G KP + LP Q A P QPG+ PPS
Sbjct: 447 GKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPP---QQPGSAKPPSQQ 503
Query: 150 MGINSYLPSQPSSLPPSYFGNQPQGIPQPGYN-PYRHTPGSSRANPYIAPPQLQQCQTPG 208
G P QP PS PQ QPG P PGS++ + P Q
Sbjct: 504 PGSTKPPPQQPGPAKPS-----PQ---QPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQST 555
Query: 209 PPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVP 246
P SG P+Q P V S + P Q +P
Sbjct: 556 KPVSQTGSGKPLQP--------PTVSPSAKQPPSQGLP 585
Score = 37.4 bits (85), Expect = 0.071
Identities = 46/193 (23%), Positives = 66/193 (34%), Gaps = 22/193 (11%)
Query: 68 GQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQSPLTTAATSVGQSGFPKPLTALPFTTGSQ 127
G S P S+ + +P Q A Q KP T L + S
Sbjct: 714 GSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDL--VSSSS 771
Query: 128 DVSNAFSPSISKAQPGAPPSSLMGINSYLPSQPSSLPPSYFGNQP---QGIPQPGYN--- 181
+ PS SK Q A + + + S PP+ P + IP+P +
Sbjct: 772 ATTKPDIPS-SKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKI 830
Query: 182 -----PYRHTPGSSRANPYIAPPQLQQCQT---PGPPAHPPPSGPPVQMYQMPPGSLPPV 233
P + G + +P + ++ QT P P A P P G P PPG P
Sbjct: 831 ISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPT-----PPGPRPTA 885
Query: 234 PSSVQSPAQQQVP 246
+V +P Q P
Sbjct: 886 GQTVPTPQQSPKP 898
Score = 32.3 bits (72), Expect = 2.3
Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 11/120 (9%)
Query: 136 SISKAQPGAPPSSLMGINSYLPSQPSSLPPSYF-GNQPQGIPQPGYNPYRHTPGSS---- 190
S+S+ PPSS++ + L +YF + G +P +P S
Sbjct: 2334 SLSETVFDHPPSSVIAL-----PMKEQLSTTYFTSGETFGQEKPASQLPSGSPSVSSLPA 2388
Query: 191 RANPYIAPPQLQ-QCQTPGPPAHPPPSGPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARP 249
+ P+ L Q P PP PPP PP PP P P P ++ A P
Sbjct: 2389 KPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASP 2448
Score = 32.0 bits (71), Expect = 3.0
Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 34/142 (23%)
Query: 127 QDVSNAFSPSIS------KAQPGAPPSS----LMGINSYLPSQPSSLPPSYFGNQPQGIP 176
Q+ S FS ++ K+QP P + L G + + SQ S+L + QP
Sbjct: 899 QEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLIST--AGQPGPHS 956
Query: 177 QPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPSGPPVQMYQMPPGSLP--PVP 234
Q G PG AP + Q P P P GPP Q PP PV
Sbjct: 957 QSG-------PG--------APMK----QAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVK 997
Query: 235 SSVQSPAQQQV-PARPGAPSVQ 255
++PA +++ P AP+V+
Sbjct: 998 KETKAPAAEKLEPKAEQAPTVK 1019
>gi|34304383 Usher syndrome 1G protein [Homo sapiens]
Length = 461
Score = 52.8 bits (125), Expect = 2e-06
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 627 EEPKLTLDESYDLVVENKEVLTLQETLEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEM 686
+E L LDE + E L+ L +L + ++ + +EKID+E+L++C+ DL+ +
Sbjct: 375 DELDLGLDEDLE-----PETSPLETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSI 429
Query: 687 GIPLGPRKKIANFVEHKAAKLKK 709
+PLGPRKKI V + +++
Sbjct: 430 SVPLGPRKKILGAVRRRRQAMER 452
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 52.0 bits (123), Expect = 3e-06
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 26/234 (11%)
Query: 42 QASASPASLLLPGEDSTDVGEED---SFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQ 98
Q S+ P L G D +G+++ + Q +H Q +Y ++ + P + Q
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAY--KMLARGQPLPDHLQ 201
Query: 99 SPLTTAATSVG-QSGFPK-PLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYL 156
+ G Q P P ++ T P A P MG +
Sbjct: 202 MAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP 261
Query: 157 PSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPS 216
P PS +PP G P G P+P + P ++ A P P +L Q G P+ PP+
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKP----WPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPA 317
Query: 217 GPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQ 270
+PP + P +P QSP Q PA+P AP V + Q++ P+Q
Sbjct: 318 --------VPPAASPVMPPQTQSPGQ---PAQP-APMVPLHQK---QSRITPIQ 356
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 52.0 bits (123), Expect = 3e-06
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 26/234 (11%)
Query: 42 QASASPASLLLPGEDSTDVGEED---SFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQ 98
Q S+ P L G D +G+++ + Q +H Q +Y ++ + P + Q
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAY--KMLARGQPLPDHLQ 201
Query: 99 SPLTTAATSVG-QSGFPK-PLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYL 156
+ G Q P P ++ T P A P MG +
Sbjct: 202 MAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP 261
Query: 157 PSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPS 216
P PS +PP G P G P+P + P ++ A P P +L Q G P+ PP+
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKP----WPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPA 317
Query: 217 GPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQ 270
+PP + P +P QSP Q PA+P AP V + Q++ P+Q
Sbjct: 318 --------VPPAASPVMPPQTQSPGQ---PAQP-APMVPLHQK---QSRITPIQ 356
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 52.0 bits (123), Expect = 3e-06
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 26/234 (11%)
Query: 42 QASASPASLLLPGEDSTDVGEED---SFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQ 98
Q S+ P L G D +G+++ + Q +H Q +Y ++ + P + Q
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAY--KMLARGQPLPDHLQ 201
Query: 99 SPLTTAATSVG-QSGFPK-PLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYL 156
+ G Q P P ++ T P A P MG +
Sbjct: 202 MAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP 261
Query: 157 PSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPS 216
P PS +PP G P G P+P + P ++ A P P +L Q G P+ PP+
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKP----WPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPA 317
Query: 217 GPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQ 270
+PP + P +P QSP Q PA+P AP V + Q++ P+Q
Sbjct: 318 --------VPPAASPVMPPQTQSPGQ---PAQP-APMVPLHQK---QSRITPIQ 356
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 52.0 bits (123), Expect = 3e-06
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 26/234 (11%)
Query: 42 QASASPASLLLPGEDSTDVGEED---SFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQ 98
Q S+ P L G D +G+++ + Q +H Q +Y ++ + P + Q
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAY--KMLARGQPLPDHLQ 201
Query: 99 SPLTTAATSVG-QSGFPK-PLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYL 156
+ G Q P P ++ T P A P MG +
Sbjct: 202 MAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP 261
Query: 157 PSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPS 216
P PS +PP G P G P+P + P ++ A P P +L Q G P+ PP+
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKP----WPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPA 317
Query: 217 GPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQ 270
+PP + P +P QSP Q PA+P AP V + Q++ P+Q
Sbjct: 318 --------VPPAASPVMPPQTQSPGQ---PAQP-APMVPLHQK---QSRITPIQ 356
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 52.0 bits (123), Expect = 3e-06
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 26/234 (11%)
Query: 42 QASASPASLLLPGEDSTDVGEED---SFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQ 98
Q S+ P L G D +G+++ + Q +H Q +Y ++ + P + Q
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAY--KMLARGQPLPDHLQ 201
Query: 99 SPLTTAATSVG-QSGFPK-PLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYL 156
+ G Q P P ++ T P A P MG +
Sbjct: 202 MAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP 261
Query: 157 PSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPS 216
P PS +PP G P G P+P + P ++ A P P +L Q G P+ PP+
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKP----WPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPA 317
Query: 217 GPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQ 270
+PP + P +P QSP Q PA+P AP V + Q++ P+Q
Sbjct: 318 --------VPPAASPVMPPQTQSPGQ---PAQP-APMVPLHQK---QSRITPIQ 356
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 52.0 bits (123), Expect = 3e-06
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 26/234 (11%)
Query: 42 QASASPASLLLPGEDSTDVGEED---SFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQ 98
Q S+ P L G D +G+++ + Q +H Q +Y ++ + P + Q
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAY--KMLARGQPLPDHLQ 201
Query: 99 SPLTTAATSVG-QSGFPK-PLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYL 156
+ G Q P P ++ T P A P MG +
Sbjct: 202 MAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP 261
Query: 157 PSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPS 216
P PS +PP G P G P+P + P ++ A P P +L Q G P+ PP+
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKP----WPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPA 317
Query: 217 GPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQ 270
+PP + P +P QSP Q PA+P AP V + Q++ P+Q
Sbjct: 318 --------VPPAASPVMPPQTQSPGQ---PAQP-APMVPLHQK---QSRITPIQ 356
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 52.0 bits (123), Expect = 3e-06
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 26/234 (11%)
Query: 42 QASASPASLLLPGEDSTDVGEED---SFLGQTSIHTSAPQTFSYFSQVSSSSDPFGNIGQ 98
Q S+ P L G D +G+++ + Q +H Q +Y ++ + P + Q
Sbjct: 144 QMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAY--KMLARGQPLPDHLQ 201
Query: 99 SPLTTAATSVG-QSGFPK-PLTALPFTTGSQDVSNAFSPSISKAQPGAPPSSLMGINSYL 156
+ G Q P P ++ T P A P MG +
Sbjct: 202 MAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMP 261
Query: 157 PSQPSSLPPSYFGNQPQGIPQPGYNPYRHTPGSSRANPYIAPPQLQQCQTPGPPAHPPPS 216
P PS +PP G P G P+P + P ++ A P P +L Q G P+ PP+
Sbjct: 262 PPGPSGVPPGMPGQPPGGPPKP----WPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPA 317
Query: 217 GPPVQMYQMPPGSLPPVPSSVQSPAQQQVPARPGAPSVQVPSPFLLQNQYEPVQ 270
+PP + P +P QSP Q PA+P AP V + Q++ P+Q
Sbjct: 318 --------VPPAASPVMPPQTQSPGQ---PAQP-APMVPLHQK---QSRITPIQ 356
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,656,320
Number of Sequences: 37866
Number of extensions: 2455759
Number of successful extensions: 19761
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 1012
Number of HSP's that attempted gapping in prelim test: 11684
Number of HSP's gapped (non-prelim): 5154
length of query: 1000
length of database: 18,247,518
effective HSP length: 112
effective length of query: 888
effective length of database: 14,006,526
effective search space: 12437795088
effective search space used: 12437795088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.