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Search of human proteins with 59710109
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|59710109 hypothetical protein LOC51300 [Homo sapiens]
(285 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|59710109 hypothetical protein LOC51300 [Homo sapiens] 579 e-165
gi|5454122 translocase of inner mitochondrial membrane 23 (yeast... 35 0.058
gi|239744083 PREDICTED: hypothetical protein XP_002343027 isofor... 35 0.058
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 35 0.058
gi|239744085 PREDICTED: hypothetical protein XP_002343028 isofor... 34 0.17
gi|5032181 translocase of inner mitochondrial membrane 17 homolo... 33 0.29
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 32 0.64
gi|148746195 trichohyalin [Homo sapiens] 32 0.83
gi|239753874 PREDICTED: similar to hCG2036814 [Homo sapiens] 30 1.9
gi|239748437 PREDICTED: similar to hCG2036814 [Homo sapiens] 30 1.9
gi|239742371 PREDICTED: hypothetical protein XP_002342504 [Homo ... 30 1.9
gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] 30 1.9
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 30 1.9
gi|22748943 hypothetical protein LOC145483 [Homo sapiens] 30 2.4
gi|115298654 mutY homolog isoform 4 [Homo sapiens] 30 3.2
gi|115298652 mutY homolog isoform 4 [Homo sapiens] 30 3.2
gi|115298650 mutY homolog isoform 3 [Homo sapiens] 30 3.2
gi|115298648 mutY homolog isoform 2 [Homo sapiens] 30 3.2
gi|6912520 mutY homolog isoform 1 [Homo sapiens] 30 3.2
gi|190358497 mutY homolog isoform 5 [Homo sapiens] 30 3.2
gi|24797106 UBX domain containing 8 [Homo sapiens] 30 3.2
gi|109134347 NY-REN-58 antigen [Homo sapiens] 30 3.2
gi|109134355 NY-REN-58 antigen [Homo sapiens] 30 3.2
gi|20270371 carboxymethylenebutenolidase [Homo sapiens] 29 5.4
gi|45331213 RAN binding protein 6 [Homo sapiens] 28 7.0
gi|148839339 nexilin (F actin binding protein) [Homo sapiens] 28 7.0
gi|40354197 THAP domain containing 11 [Homo sapiens] 28 9.2
>gi|59710109 hypothetical protein LOC51300 [Homo sapiens]
Length = 285
Score = 579 bits (1492), Expect = e-165
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 1 MEVPPPAPRSFLCRALCLFPRVFAAEAVTADSEVLEERQKRLPYVPEPYYPESGWDRLRE 60
MEVPPPAPRSFLCRALCLFPRVFAAEAVTADSEVLEERQKRLPYVPEPYYPESGWDRLRE
Sbjct: 1 MEVPPPAPRSFLCRALCLFPRVFAAEAVTADSEVLEERQKRLPYVPEPYYPESGWDRLRE 60
Query: 61 LFGKDEQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQQYIEQSQAEIYHNRFDAV 120
LFGKDEQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQQYIEQSQAEIYHNRFDAV
Sbjct: 61 LFGKDEQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQQYIEQSQAEIYHNRFDAV 120
Query: 121 QSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFR 180
QSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFR
Sbjct: 121 QSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFR 180
Query: 181 INVGLRGLVAGGIIGALLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRL 240
INVGLRGLVAGGIIGALLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRL
Sbjct: 181 INVGLRGLVAGGIIGALLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRL 240
Query: 241 QVTEHLPEKIESSLQEDEPENDAKKIEALLNLPRNPSVIDKQDKD 285
QVTEHLPEKIESSLQEDEPENDAKKIEALLNLPRNPSVIDKQDKD
Sbjct: 241 QVTEHLPEKIESSLQEDEPENDAKKIEALLNLPRNPSVIDKQDKD 285
>gi|5454122 translocase of inner mitochondrial membrane 23 (yeast)
homolog [Homo sapiens]
Length = 209
Score = 35.4 bits (80), Expect = 0.058
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 133 RYGWRWGWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFRINVGLRGLVAGG 192
R G W +++ + R + + V AG +TG L++ GLRG+ GG
Sbjct: 122 RQGALWANTLGSLALLYSAFGVIIEKTRGAEDDLNTVAAGTMTGMLYKCTGGLRGIARGG 181
Query: 193 IIGALLGTPVGGLLMAFQKYSGETVQE 219
+ G L T + L ++ G +Q+
Sbjct: 182 LTGLTL-TSLYALYNNWEHMKGSLLQQ 207
>gi|239744083 PREDICTED: hypothetical protein XP_002343027 isoform 1
[Homo sapiens]
Length = 209
Score = 35.4 bits (80), Expect = 0.058
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 133 RYGWRWGWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFRINVGLRGLVAGG 192
R G W +++ + R + + V AG +TG L++ GLRG+ GG
Sbjct: 122 RQGALWANTLGSLALLYSAFGVIIEKTRGAEDDLNTVAAGTMTGMLYKCTGGLRGIARGG 181
Query: 193 IIGALLGTPVGGLLMAFQKYSGETVQE 219
+ G L T + L ++ G +Q+
Sbjct: 182 LTGLTL-TSLYALYNNWEHMKGSLLQQ 207
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 35.4 bits (80), Expect = 0.058
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 170 IAGAVTGSLFRINVGLRGLV--AGGIIGALLGTPVGGLLMAFQKYS---GETVQERKQKD 224
I GA+ + G+ GL + + AL+G G LL +Q+Y E +Q+++Q+
Sbjct: 3323 IPGALQSGYLQPMYGMEGLFPYSPALSQALMGLSPGSLLQQYQQYQQSLQEAIQQQQQRQ 3382
Query: 225 RKALHELKLEEWKGRLQVTEHLP-------EKIESSLQEDEPENDAKKIEALL-NLPRNP 276
+ + K+++ + + T P + + S + +E +N +++ LL LP P
Sbjct: 3383 LQQQQQQKVQQQQPKASQTPVPPGAPSPDKDPAKESPKPEEQKNTPREVSPLLPKLPEEP 3442
Query: 277 SVIDK 281
K
Sbjct: 3443 EAESK 3447
>gi|239744085 PREDICTED: hypothetical protein XP_002343028 isoform 2
[Homo sapiens]
Length = 172
Score = 33.9 bits (76), Expect = 0.17
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 135 GWRWGWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFRINVGLRGLVAGGII 194
G W +++ + R + + V AG +TG L++ GLRG+ GG+
Sbjct: 87 GALWANTLGSLALLYSAFGVIIEKTRGAEDDLNTVAAGTMTGMLYKCTGGLRGIARGGLT 146
Query: 195 GALLGTPVGGLLMAFQKYSGETVQE 219
G L T + L ++ G +Q+
Sbjct: 147 GLTL-TSLYALYNNWEHMKGSLLQQ 170
>gi|5032181 translocase of inner mitochondrial membrane 17 homolog B
[Homo sapiens]
Length = 172
Score = 33.1 bits (74), Expect = 0.29
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 139 GWRTAVFVTIFNTVNTSLNVYRNKDALSHFVIAGAVTGSLFRINVGLRGLVAGGIIGALL 198
G AV+ +F+T++ L R K+ + + +GA+TG++ G +V ++G +L
Sbjct: 63 GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGIL 122
Query: 199 GTPVGGLLMAFQKYSGE 215
+ G+ + +Y+ +
Sbjct: 123 LALIEGVGILLTRYTAQ 139
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 32.0 bits (71), Expect = 0.64
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Query: 25 AEAVTADSEVLEE---RQKRLPYVPEPYYPESGWDRLRELFGKDEQQRISKDLA 75
AE T +E+ +E KRLP VPEP P+ WD L E E Q +S D A
Sbjct: 104 AEIETRIAELRKEGFWSLKRLPKVPEPPRPKGHWDYLCE-----EMQWLSADFA 152
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 31.6 bits (70), Expect = 0.83
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 205 LLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQEDEPEND-- 262
LL +K E Q+R+++ + E + +EW+ R E + K E LQE+EP+
Sbjct: 215 LLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKR----ETVLRKEEEKLQEEEPQRQRE 270
Query: 263 -AKKIEALLNLPRNPSVIDKQDKD 285
++ E L L R ++Q+++
Sbjct: 271 LQEEEEQLRKLERQELRRERQEEE 294
Score = 28.1 bits (61), Expect = 9.2
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 205 LLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVT---EHLPEKIESSLQEDEPEN 261
LL + ++ Q R+++ + LK EE + RL+ EH E+ E L E+E E
Sbjct: 633 LLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQEQ 692
Query: 262 DAKKIEA 268
++I++
Sbjct: 693 ARERIKS 699
>gi|239753874 PREDICTED: similar to hCG2036814 [Homo sapiens]
Length = 547
Score = 30.4 bits (67), Expect = 1.9
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 202 VGGLLMAFQKYSGETVQER-----KQKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQE 256
+G L +K+ + ++ER ++K K LH+ L+E K + E +K ++E
Sbjct: 136 IGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKD-ISSLEPCCKKWVVEIRE 194
Query: 257 DEPENDAKKIEAL 269
+EP + K+EA+
Sbjct: 195 EEPNSSLMKVEAV 207
>gi|239748437 PREDICTED: similar to hCG2036814 [Homo sapiens]
Length = 547
Score = 30.4 bits (67), Expect = 1.9
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 202 VGGLLMAFQKYSGETVQER-----KQKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQE 256
+G L +K+ + ++ER ++K K LH+ L+E K + E +K ++E
Sbjct: 136 IGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKD-ISSLEPCCKKWVVEIRE 194
Query: 257 DEPENDAKKIEAL 269
+EP + K+EA+
Sbjct: 195 EEPNSSLMKVEAV 207
>gi|239742371 PREDICTED: hypothetical protein XP_002342504 [Homo
sapiens]
Length = 547
Score = 30.4 bits (67), Expect = 1.9
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 202 VGGLLMAFQKYSGETVQER-----KQKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQE 256
+G L +K+ + ++ER ++K K LH+ L+E K + E +K ++E
Sbjct: 136 IGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKD-ISSLEPCCKKWVVEIRE 194
Query: 257 DEPENDAKKIEAL 269
+EP + K+EA+
Sbjct: 195 EEPNSSLMKVEAV 207
>gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]
Length = 1226
Score = 30.4 bits (67), Expect = 1.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 243 TEHLPEKIESSLQEDEPENDAKKIEALL 270
+ H+PE+ SS DE E+D K+I+ LL
Sbjct: 146 SNHIPEEESSSSSSDEDEDDRKQIDELL 173
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 30.4 bits (67), Expect = 1.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 243 TEHLPEKIESSLQEDEPENDAKKIEALL 270
+ H+PE+ SS DE E+D K+I+ LL
Sbjct: 146 SNHIPEEESSSSSSDEDEDDRKQIDELL 173
>gi|22748943 hypothetical protein LOC145483 [Homo sapiens]
Length = 647
Score = 30.0 bits (66), Expect = 2.4
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 217 VQERKQKDRKALHELK--LEEWKGRLQVTEHLPEKIESSLQEDEPE 260
++E + DRK E K LEE K R+Q +L E++ L + E E
Sbjct: 518 LKENRNNDRKRAKEYKKELEEMKQRIQTRPYLFEQVAKDLAKKEAE 563
>gi|115298654 mutY homolog isoform 4 [Homo sapiens]
Length = 521
Score = 29.6 bits (65), Expect = 3.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 192 GIIGA---LLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVT--EHL 246
G +GA L+ P GLL ++ T + +Q RKAL + +L+ W G L T HL
Sbjct: 353 GALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQ-ELQRWAGPLPATHLRHL 411
Query: 247 PEKIES 252
E + +
Sbjct: 412 GEVVHT 417
>gi|115298652 mutY homolog isoform 4 [Homo sapiens]
Length = 521
Score = 29.6 bits (65), Expect = 3.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 192 GIIGA---LLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVT--EHL 246
G +GA L+ P GLL ++ T + +Q RKAL + +L+ W G L T HL
Sbjct: 353 GALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQ-ELQRWAGPLPATHLRHL 411
Query: 247 PEKIES 252
E + +
Sbjct: 412 GEVVHT 417
>gi|115298650 mutY homolog isoform 3 [Homo sapiens]
Length = 522
Score = 29.6 bits (65), Expect = 3.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 192 GIIGA---LLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVT--EHL 246
G +GA L+ P GLL ++ T + +Q RKAL + +L+ W G L T HL
Sbjct: 354 GALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQ-ELQRWAGPLPATHLRHL 412
Query: 247 PEKIES 252
E + +
Sbjct: 413 GEVVHT 418
>gi|115298648 mutY homolog isoform 2 [Homo sapiens]
Length = 535
Score = 29.6 bits (65), Expect = 3.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 192 GIIGA---LLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVT--EHL 246
G +GA L+ P GLL ++ T + +Q RKAL + +L+ W G L T HL
Sbjct: 367 GALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQ-ELQRWAGPLPATHLRHL 425
Query: 247 PEKIES 252
E + +
Sbjct: 426 GEVVHT 431
>gi|6912520 mutY homolog isoform 1 [Homo sapiens]
Length = 546
Score = 29.6 bits (65), Expect = 3.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 192 GIIGA---LLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVT--EHL 246
G +GA L+ P GLL ++ T + +Q RKAL + +L+ W G L T HL
Sbjct: 378 GALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQ-ELQRWAGPLPATHLRHL 436
Query: 247 PEKIES 252
E + +
Sbjct: 437 GEVVHT 442
>gi|190358497 mutY homolog isoform 5 [Homo sapiens]
Length = 549
Score = 29.6 bits (65), Expect = 3.2
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 192 GIIGA---LLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVT--EHL 246
G +GA L+ P GLL ++ T + +Q RKAL + +L+ W G L T HL
Sbjct: 381 GALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQ-ELQRWAGPLPATHLRHL 439
Query: 247 PEKIES 252
E + +
Sbjct: 440 GEVVHT 445
>gi|24797106 UBX domain containing 8 [Homo sapiens]
Length = 445
Score = 29.6 bits (65), Expect = 3.2
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 218 QERKQKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQEDEPENDAKKIEALLNLPRNPS 277
+ERK++ + + + KL E + R + E K+E E P+ D + ++ + LP +
Sbjct: 315 RERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPD-DPESVKIIFKLPNDSR 373
Query: 278 V 278
V
Sbjct: 374 V 374
>gi|109134347 NY-REN-58 antigen [Homo sapiens]
Length = 701
Score = 29.6 bits (65), Expect = 3.2
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 222 QKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQ 255
QK RK+LHE KL+ + +++V E E++E+ Q
Sbjct: 567 QKKRKSLHENKLKRLQEKVEVLEAKKEELETENQ 600
>gi|109134355 NY-REN-58 antigen [Homo sapiens]
Length = 701
Score = 29.6 bits (65), Expect = 3.2
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 222 QKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQ 255
QK RK+LHE KL+ + +++V E E++E+ Q
Sbjct: 567 QKKRKSLHENKLKRLQEKVEVLEAKKEELETENQ 600
>gi|20270371 carboxymethylenebutenolidase [Homo sapiens]
Length = 245
Score = 28.9 bits (63), Expect = 5.4
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 47 EPYYPESGWDRLRELFGKDEQQRISKDLANICK------TAATAGIIGWVYGGIPAFIHA 100
EP+ P W E Q+I ++++ I K A GI+G+ +GG A H
Sbjct: 83 EPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGG-TAVHHL 141
Query: 101 KQQYIE 106
+Y E
Sbjct: 142 MMKYSE 147
>gi|45331213 RAN binding protein 6 [Homo sapiens]
Length = 1105
Score = 28.5 bits (62), Expect = 7.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 46 PEPYYPESGWDRLRELFGKDEQQRISKDLANICKTAA 82
P+ Y S W R+ ++ GKD QQ + + + KTA+
Sbjct: 607 PQTSYMVSAWARMCKILGKDFQQYLPLVIEPLIKTAS 643
>gi|148839339 nexilin (F actin binding protein) [Homo sapiens]
Length = 675
Score = 28.5 bits (62), Expect = 7.0
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 203 GGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQEDEPEND 262
G L + F++ + ++E K++ EE K +L++ + E++ + E+E EN+
Sbjct: 372 GKLEINFEELLKQKMEEEKRRTE--------EERKHKLEMEKQEFEQLRQEMGEEEEENE 423
Query: 263 ----AKKIEALLNLPRNPSVIDKQDK 284
+++ E L+ L R+ S+ K K
Sbjct: 424 TFGLSREYEELIKLKRSGSIQAKNLK 449
>gi|40354197 THAP domain containing 11 [Homo sapiens]
Length = 314
Score = 28.1 bits (61), Expect = 9.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 199 GTPVGGLLMAFQKYSGETVQE-----RKQKDRKALHELKLEEWKGRLQVTEHLPEKIESS 253
G P G ++ SG T +E +Q+D AL E+K++E KG ++ K+
Sbjct: 236 GFPDTGSDHSYSLSSGTTEEELLRKLNEQRDILALMEVKMKEMKGSIRHLRLTEAKLREE 295
Query: 254 LQEDE 258
L+E +
Sbjct: 296 LREKD 300
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,983,947
Number of Sequences: 37866
Number of extensions: 470954
Number of successful extensions: 1784
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1768
Number of HSP's gapped (non-prelim): 28
length of query: 285
length of database: 18,247,518
effective HSP length: 101
effective length of query: 184
effective length of database: 14,423,052
effective search space: 2653841568
effective search space used: 2653841568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.