Guide to the Human Genome
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Name: TIMM17B Sequence: fasta or formatted (172aa) NCBI GI: 5032181
Description:

translocase of inner mitochondrial membrane 17 homolog B

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         18           2
 C cysteine            1.7          3           1
 D aspartate           3.5          6           2
 E glutamate           3.5          6           2
 F phenylalanine       4.1          7           1
 G glycine            14.5         25           3
 H histidine           1.2          2           1
 I isoleucine          6.4         11           1
 K lysine              1.7          3           1
 L leucine             8.1         14           2
 M methionine          2.9          5           2
 N asparagine          2.3          4           1
 P proline             8.1         14           2
 Q glutamine           4.1          7           2
 R arginine            7.6         13           1
 S serine              5.2          9           1
 T threonine           4.1          7           1
 V valine              5.8         10           1
 W tryptophan          1.7          3           1
 Y tyrosine            2.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translocase of inner mitochondrial membrane 17 homolo... 
TIMM17A               0.758   translocase of inner mitochondrial membrane 17 homolo...
TIMM22                0.051   translocase of inner mitochondrial membrane 22 homol...
C3orf1                0.024   hypothetical protein LOC51300 
ADCY5                 0.024   adenylate cyclase 5 
EPHA2                 0.015   ephrin receptor EphA2 
GPR137                0.012   G protein-coupled receptor 137 
TIMM23                0.009   translocase of inner mitochondrial membrane 23 (yeast...
LOC100287932          0.009   PREDICTED: hypothetical protein XP_002343028 isofor...
LOC100287932          0.009   PREDICTED: hypothetical protein XP_002343027 isofor...
TYR                   0.009   tyrosinase precursor 
LOC100289853          0.009   PREDICTED: hypothetical protein XP_002347690 
ITGAX                 0.009   integrin alpha X precursor 
ARHGAP17              0.009   nadrin isoform 1 
ARHGAP17              0.009   nadrin isoform 2 
SORL1                 0.009   sortilin-related receptor containing LDLR class A rep...
EIF4G3                0.009   eukaryotic translation initiation factor 4 gamma, 3 ...
PRRG2                 0.006   proline rich Gla (G-carboxyglutamic acid) 2 
C1QA                  0.006   complement component 1, q subcomponent, A chain precu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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