Guide to the Human Genome
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Name: ERMN Sequence: fasta or formatted (284aa) NCBI GI: 58331175
Description:

ermin, ERM-like protein isoform b

Referenced in:

Oligodendrocytes and Myelin

Other entries for this name:
alt prot [297aa] ermin, ERM-like protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         12           2
 C cysteine            0.7          2           1
 D aspartate           8.8         25           6
 E glutamate          14.1         40           3
 F phenylalanine       2.5          7           1
 G glycine             4.2         12           1
 H histidine           2.8          8           1
 I isoleucine          4.9         14           1
 K lysine              8.8         25           3
 L leucine             6.3         18           2
 M methionine          2.8          8           2
 N asparagine          4.6         13           2
 P proline             4.6         13           2
 Q glutamine           6.0         17           2
 R arginine            5.3         15           2
 S serine              8.5         24           2
 T threonine           5.3         15           1
 V valine              3.2          9           1
 W tryptophan          1.1          3           1
 Y tyrosine            1.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ermin, ERM-like protein isoform b 
ERMN                  1.000   ermin, ERM-like protein isoform a 
LOC651807             0.045   PREDICTED: hypothetical protein 
MSN                   0.038   moesin 
LOC283685             0.038   PREDICTED: golgi autoantigen, golgin subfamily a-li...
HIRIP3                0.038   HIRA interacting protein 3 
LOC645202             0.036   PREDICTED: hypothetical protein LOC645202 
LOC727832             0.036   golgi autoantigen, golgin subfamily a-like 
LOC100133758          0.036   PREDICTED: hypothetical protein, partial 
CNGB1                 0.034   cyclic nucleotide gated channel beta 1 isoform a [H...
SFRS18                0.034   splicing factor, arginine/serine-rich 130 
SFRS18                0.034   splicing factor, arginine/serine-rich 130 
HTATSF1               0.034   HIV-1 Tat specific factor 1 
HTATSF1               0.034   HIV-1 Tat specific factor 1 
RDX                   0.034   radixin 
HRC                   0.034   histidine rich calcium binding protein precursor [Hom...
LOC283767             0.033   golgi autoantigen, golgin subfamily a-like 
UBTF                  0.033   upstream binding transcription factor, RNA polymera...
UBTF                  0.033   upstream binding transcription factor, RNA polymera...
UBTF                  0.033   upstream binding transcription factor, RNA polymerase...
IWS1                  0.033   IWS1 homolog 
LOC283685             0.031   PREDICTED: golgi autoantigen, golgin subfamily a-li...
EZR                   0.031   ezrin 
EZR                   0.031   ezrin 
EIF5B                 0.031   eukaryotic translation initiation factor 5B 
NCL                   0.029   nucleolin 
SETD1A                0.029   SET domain containing 1A 
SETD1B                0.029   SET domain containing 1B 
ADD2                  0.027   adducin 2 isoform a 
MYT1L                 0.027   myelin transcription factor 1-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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