Guide to the Human Genome
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Name: ANKRD16 Sequence: fasta or formatted (304aa) NCBI GI: 58331117
Description:

ankyrin repeat domain 16 isoform c

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [361aa] ankyrin repeat domain 16 isoform a
alt prot [361aa] ankyrin repeat domain 16 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         37           2
 C cysteine            4.3         13           1
 D aspartate           6.6         20           1
 E glutamate           5.3         16           2
 F phenylalanine       1.0          3           1
 G glycine             7.6         23           2
 H histidine           4.9         15           1
 I isoleucine          3.0          9           1
 K lysine              3.9         12           2
 L leucine            12.2         37           3
 M methionine          2.3          7           2
 N asparagine          2.0          6           1
 P proline             4.9         15           1
 Q glutamine           3.3         10           1
 R arginine            7.6         23           2
 S serine              3.9         12           1
 T threonine           4.6         14           1
 V valine              6.2         19           1
 W tryptophan          2.0          6           1
 Y tyrosine            2.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 16 isoform c 
ANKRD16               0.920   ankyrin repeat domain 16 isoform a 
ANKRD16               0.920   ankyrin repeat domain 16 isoform a 
ANK3                  0.126   ankyrin 3 isoform 1 
ANKRD28               0.126   ankyrin repeat domain 28 
ANKRD50               0.125   ankyrin repeat domain 50 
ANKK1                 0.123   ankyrin repeat and kinase domain containing 1 
ANK1                  0.123   ankyrin 1 isoform 9 
ANK1                  0.123   ankyrin 1 isoform 1 
ANK1                  0.123   ankyrin 1 isoform 3 
ANK1                  0.123   ankyrin 1 isoform 2 
ANK1                  0.123   ankyrin 1 isoform 4 
ESPN                  0.123   espin 
TNKS                  0.122   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ASB2                  0.120   ankyrin repeat and SOCS box-containing protein 2 [Ho...
RIPK4                 0.118   ankyrin repeat domain 3 
ANK2                  0.117   ankyrin 2 isoform 3 
ANK2                  0.117   ankyrin 2 isoform 2 
ANK2                  0.117   ankyrin 2 isoform 1 
TNKS2                 0.117   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
RNASEL                0.112   ribonuclease L 
MIB1                  0.110   mindbomb homolog 1 
FEM1A                 0.108   fem-1 homolog a 
ANKRD44               0.108   ankyrin repeat domain 44 
CASKIN1               0.107   CASK interacting protein 1 
LOC441869             0.100   hypothetical protein LOC441869 
FEM1C                 0.100   feminization 1 homolog a 
ANKRD52               0.097   ankyrin repeat domain 52 
ANKDD1A               0.097   ankyrin repeat and death domain containing 1A 
ESPNL                 0.092   espin-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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