Guide to the Human Genome
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Name: RUVBL2 Sequence: fasta or formatted (463aa) NCBI GI: 5730023
Description:

RuvB-like 2

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         37           2
 C cysteine            0.6          3           1
 D aspartate           5.8         27           2
 E glutamate           9.1         42           3
 F phenylalanine       2.8         13           1
 G glycine             7.8         36           1
 H histidine           1.3          6           1
 I isoleucine          8.9         41           2
 K lysine              5.8         27           1
 L leucine             8.0         37           2
 M methionine          3.2         15           1
 N asparagine          1.1          5           1
 P proline             2.6         12           1
 Q glutamine           4.1         19           1
 R arginine            7.1         33           2
 S serine              6.3         29           1
 T threonine           8.9         41           2
 V valine              6.5         30           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.9          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RuvB-like 2 
RUVBL1                0.405   RuvB-like 1 
NVL                   0.016   nuclear VCP-like isoform 2 
NVL                   0.016   nuclear VCP-like isoform 1 
SPATA5                0.014   spermatogenesis associated 5 
YME1L1                0.014   YME1-like 1 isoform 1 
YME1L1                0.014   YME1-like 1 isoform 3 
RFC2                  0.012   replication factor C 2 isoform 2 
VCP                   0.010   valosin-containing protein 
ATAD3A                0.010   ATPase family, AAA domain containing 3A 
ATAD3C                0.010   ATPase family, AAA domain containing 3C 
KATNAL2               0.009   katanin p60 subunit A-like 2 
ATAD5                 0.009   ATPase family, AAA domain containing 5 
PSMC5                 0.008   proteasome 26S ATPase subunit 5 
VPS4B                 0.008   vacuolar protein sorting factor 4B 
VPS4A                 0.008   vacuolar protein sorting factor 4A 
KATNAL1               0.008   katanin p60 subunit A-like 1 
KATNAL1               0.008   katanin p60 subunit A-like 1 
ATAD3B                0.008   AAA-ATPase  TOB3 
AFG3L2                0.008   AFG3 ATPase family gene 3-like 2 
MDN1                  0.008   MDN1, midasin homolog 
RFC2                  0.007   replication factor C 2 isoform 1 
C3orf77               0.007   hypothetical protein LOC375337 
PTPN13                0.007   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.007   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.007   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.007   protein tyrosine phosphatase, non-receptor type 13 is...
PSMC6                 0.007   proteasome 26S ATPase subunit 6 
TRIP13                0.007   thyroid hormone receptor interactor 13 
SPAST                 0.006   spastin isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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