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Search of human proteins with 5729828
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5729828 TRAF-type zinc finger domain containing 1 [Homo
sapiens]
(582 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219879806 TRAF-type zinc finger domain containing 1 [Homo sap... 1207 0.0
gi|5729828 TRAF-type zinc finger domain containing 1 [Homo sapiens] 1207 0.0
gi|40288191 XIAP associated factor 1 isoform 1 [Homo sapiens] 125 1e-28
gi|40288193 XIAP associated factor 1 isoform 2 [Homo sapiens] 104 2e-22
gi|22027630 TNF receptor-associated factor 6 [Homo sapiens] 45 1e-04
gi|4759254 TNF receptor-associated factor 6 [Homo sapiens] 45 1e-04
gi|22027622 TNF receptor-associated factor 4 [Homo sapiens] 45 2e-04
gi|22027620 TNF receptor-associated factor 3 isoform 2 [Homo sap... 43 0.001
gi|22027612 TNF receptor-associated factor 2 [Homo sapiens] 42 0.001
gi|22027627 TNF receptor-associated factor 5 [Homo sapiens] 42 0.001
gi|77404348 TNF receptor-associated factor 5 [Homo sapiens] 42 0.001
gi|11321603 TNF receptor-associated factor 5 [Homo sapiens] 42 0.001
gi|25014093 zinc finger protein 585B [Homo sapiens] 42 0.002
gi|22027616 TNF receptor-associated factor 3 isoform 1 [Homo sap... 40 0.005
gi|22027618 TNF receptor-associated factor 3 isoform 1 [Homo sap... 40 0.005
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 40 0.008
gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens] 39 0.013
gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens] 39 0.013
gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens] 39 0.013
gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens] 39 0.013
gi|134142822 zinc finger protein 133 [Homo sapiens] 38 0.029
gi|27545332 zinc finger protein 133 [Homo sapiens] 38 0.029
gi|38505215 zinc finger protein 614 [Homo sapiens] 37 0.050
gi|31657109 zinc finger protein 282 [Homo sapiens] 37 0.065
gi|113204607 zinc finger protein 157 [Homo sapiens] 36 0.11
gi|24432013 zinc finger protein 668 [Homo sapiens] 35 0.25
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 34 0.32
gi|138175817 zinc finger protein 236 [Homo sapiens] 34 0.32
gi|41349476 PR domain containing 5 [Homo sapiens] 34 0.32
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 34 0.32
>gi|219879806 TRAF-type zinc finger domain containing 1 [Homo
sapiens]
Length = 582
Score = 1207 bits (3124), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 1 MAEFLDDQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHC 60
MAEFLDDQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHC
Sbjct: 1 MAEFLDDQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHC 60
Query: 61 QVTCKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCG 120
QVTCKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCG
Sbjct: 61 QVTCKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCG 120
Query: 121 RNVLVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMR 180
RNVLVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMR
Sbjct: 121 RNVLVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMR 180
Query: 181 LPRRPLRAFESDVFHNRTTNQRNITAQVSIQNNLFEEQERQERNRGQQPPKEGGEESANL 240
LPRRPLRAFESDVFHNRTTNQRNITAQVSIQNNLFEEQERQERNRGQQPPKEGGEESANL
Sbjct: 181 LPRRPLRAFESDVFHNRTTNQRNITAQVSIQNNLFEEQERQERNRGQQPPKEGGEESANL 240
Query: 241 DFMLALSLQNEGQASSVAEQDFWRAVCEADQSHGGPRSLSDIKGAADEIMLPCEFCEELY 300
DFMLALSLQNEGQASSVAEQDFWRAVCEADQSHGGPRSLSDIKGAADEIMLPCEFCEELY
Sbjct: 241 DFMLALSLQNEGQASSVAEQDFWRAVCEADQSHGGPRSLSDIKGAADEIMLPCEFCEELY 300
Query: 301 PEELLIDHQTSCNPSRALPSLNTGSSSPRGVEEPDVIFQNFLQQAASNQLDSLMGLSNSH 360
PEELLIDHQTSCNPSRALPSLNTGSSSPRGVEEPDVIFQNFLQQAASNQLDSLMGLSNSH
Sbjct: 301 PEELLIDHQTSCNPSRALPSLNTGSSSPRGVEEPDVIFQNFLQQAASNQLDSLMGLSNSH 360
Query: 361 PVEESIIIPCEFCGVQLEEEVLFHHQDQCDQRPATATNHVTEGIPRLDSQPQETSPELPR 420
PVEESIIIPCEFCGVQLEEEVLFHHQDQCDQRPATATNHVTEGIPRLDSQPQETSPELPR
Sbjct: 361 PVEESIIIPCEFCGVQLEEEVLFHHQDQCDQRPATATNHVTEGIPRLDSQPQETSPELPR 420
Query: 421 RRVRHQGDLSSGYLDDTKQETANGPTSCLPPSRPINNMTATYNQLSRSTSGPRPGCQPSS 480
RRVRHQGDLSSGYLDDTKQETANGPTSCLPPSRPINNMTATYNQLSRSTSGPRPGCQPSS
Sbjct: 421 RRVRHQGDLSSGYLDDTKQETANGPTSCLPPSRPINNMTATYNQLSRSTSGPRPGCQPSS 480
Query: 481 PCVPKLSNSDSQDIQGRNRDSQNGAIAPGHVSVIRPPQNLYPENIVPSFSPGPSGRYGAS 540
PCVPKLSNSDSQDIQGRNRDSQNGAIAPGHVSVIRPPQNLYPENIVPSFSPGPSGRYGAS
Sbjct: 481 PCVPKLSNSDSQDIQGRNRDSQNGAIAPGHVSVIRPPQNLYPENIVPSFSPGPSGRYGAS 540
Query: 541 GRSEGGRNSRVTPAAANYRSRTAKAKPSKQQGAGDAEEEEEE 582
GRSEGGRNSRVTPAAANYRSRTAKAKPSKQQGAGDAEEEEEE
Sbjct: 541 GRSEGGRNSRVTPAAANYRSRTAKAKPSKQQGAGDAEEEEEE 582
>gi|5729828 TRAF-type zinc finger domain containing 1 [Homo sapiens]
Length = 582
Score = 1207 bits (3124), Expect = 0.0
Identities = 582/582 (100%), Positives = 582/582 (100%)
Query: 1 MAEFLDDQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHC 60
MAEFLDDQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHC
Sbjct: 1 MAEFLDDQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHC 60
Query: 61 QVTCKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCG 120
QVTCKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCG
Sbjct: 61 QVTCKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCG 120
Query: 121 RNVLVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMR 180
RNVLVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMR
Sbjct: 121 RNVLVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMR 180
Query: 181 LPRRPLRAFESDVFHNRTTNQRNITAQVSIQNNLFEEQERQERNRGQQPPKEGGEESANL 240
LPRRPLRAFESDVFHNRTTNQRNITAQVSIQNNLFEEQERQERNRGQQPPKEGGEESANL
Sbjct: 181 LPRRPLRAFESDVFHNRTTNQRNITAQVSIQNNLFEEQERQERNRGQQPPKEGGEESANL 240
Query: 241 DFMLALSLQNEGQASSVAEQDFWRAVCEADQSHGGPRSLSDIKGAADEIMLPCEFCEELY 300
DFMLALSLQNEGQASSVAEQDFWRAVCEADQSHGGPRSLSDIKGAADEIMLPCEFCEELY
Sbjct: 241 DFMLALSLQNEGQASSVAEQDFWRAVCEADQSHGGPRSLSDIKGAADEIMLPCEFCEELY 300
Query: 301 PEELLIDHQTSCNPSRALPSLNTGSSSPRGVEEPDVIFQNFLQQAASNQLDSLMGLSNSH 360
PEELLIDHQTSCNPSRALPSLNTGSSSPRGVEEPDVIFQNFLQQAASNQLDSLMGLSNSH
Sbjct: 301 PEELLIDHQTSCNPSRALPSLNTGSSSPRGVEEPDVIFQNFLQQAASNQLDSLMGLSNSH 360
Query: 361 PVEESIIIPCEFCGVQLEEEVLFHHQDQCDQRPATATNHVTEGIPRLDSQPQETSPELPR 420
PVEESIIIPCEFCGVQLEEEVLFHHQDQCDQRPATATNHVTEGIPRLDSQPQETSPELPR
Sbjct: 361 PVEESIIIPCEFCGVQLEEEVLFHHQDQCDQRPATATNHVTEGIPRLDSQPQETSPELPR 420
Query: 421 RRVRHQGDLSSGYLDDTKQETANGPTSCLPPSRPINNMTATYNQLSRSTSGPRPGCQPSS 480
RRVRHQGDLSSGYLDDTKQETANGPTSCLPPSRPINNMTATYNQLSRSTSGPRPGCQPSS
Sbjct: 421 RRVRHQGDLSSGYLDDTKQETANGPTSCLPPSRPINNMTATYNQLSRSTSGPRPGCQPSS 480
Query: 481 PCVPKLSNSDSQDIQGRNRDSQNGAIAPGHVSVIRPPQNLYPENIVPSFSPGPSGRYGAS 540
PCVPKLSNSDSQDIQGRNRDSQNGAIAPGHVSVIRPPQNLYPENIVPSFSPGPSGRYGAS
Sbjct: 481 PCVPKLSNSDSQDIQGRNRDSQNGAIAPGHVSVIRPPQNLYPENIVPSFSPGPSGRYGAS 540
Query: 541 GRSEGGRNSRVTPAAANYRSRTAKAKPSKQQGAGDAEEEEEE 582
GRSEGGRNSRVTPAAANYRSRTAKAKPSKQQGAGDAEEEEEE
Sbjct: 541 GRSEGGRNSRVTPAAANYRSRTAKAKPSKQQGAGDAEEEEEE 582
>gi|40288191 XIAP associated factor 1 isoform 1 [Homo sapiens]
Length = 301
Score = 125 bits (313), Expect = 1e-28
Identities = 55/128 (42%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Query: 12 LCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTCK-CNKKL 70
+C NCK+ + NFT+HE +C R + +CP C+EP PK ME H EH QV C C + +
Sbjct: 7 VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSM 66
Query: 71 EKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKT 130
+K L+ H+ EC R C+ C L++ + KL+ HE YCG+RTELC CG+ ++ + L
Sbjct: 67 QKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLAQ 126
Query: 131 HPEVCGRE 138
H +VC E
Sbjct: 127 HRDVCRSE 134
Score = 31.6 bits (70), Expect = 2.1
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 264 RAVCEADQSHGGPRSLSDIKGAADEIMLPCEFCEELYPEELLIDHQTSCNPSRALPSLNT 323
R VC ++Q+ G + +A E + C +C ++ PE H C P ++
Sbjct: 128 RDVCRSEQAQLGKGE----RISAPEREIYCHYCNQMIPENKYFHHMGKCCP-------DS 176
Query: 324 GSSSPRGVEEPDVIFQNFLQQAASNQLDSL 353
V P+++ + QAA NQ ++
Sbjct: 177 EFKKHFPVGNPEILPSSLPSQAAENQTSTM 206
>gi|40288193 XIAP associated factor 1 isoform 2 [Homo sapiens]
Length = 282
Score = 104 bits (260), Expect = 2e-22
Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 18/127 (14%)
Query: 12 LCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTCKCNKKLE 71
+C NCK+ + NFT+HE +C R + +CP C+EP PK ME H EH Q
Sbjct: 7 VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQAN-------- 58
Query: 72 KRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTH 131
EC R C+ C L++ + KL+ HE YCG+RTELC CG+ ++ + L H
Sbjct: 59 ----------ECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLAQH 108
Query: 132 PEVCGRE 138
+VC E
Sbjct: 109 RDVCRSE 115
Score = 31.6 bits (70), Expect = 2.1
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 264 RAVCEADQSHGGPRSLSDIKGAADEIMLPCEFCEELYPEELLIDHQTSCNPSRALPSLNT 323
R VC ++Q+ G + +A E + C +C ++ PE H C P ++
Sbjct: 109 RDVCRSEQAQLGKGE----RISAPEREIYCHYCNQMIPENKYFHHMGKCCP-------DS 157
Query: 324 GSSSPRGVEEPDVIFQNFLQQAASNQLDSL 353
V P+++ + QAA NQ ++
Sbjct: 158 EFKKHFPVGNPEILPSSLPSQAAENQTSTM 187
>gi|22027630 TNF receptor-associated factor 6 [Homo sapiens]
Length = 522
Score = 45.4 bits (106), Expect = 1e-04
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 14 DNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAE--HCQVTC-KCNKKL 70
+ C ++ + + H+ HC+ + CP C+ PF K + H+ + QV+C C +
Sbjct: 137 EGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASM 196
Query: 71 EKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHED 107
+ H++ CPL +C++C+ L ++ H D
Sbjct: 197 AFEDKEIHDQ-NCPLANVICEYCNTILIREQMPNHYD 232
Score = 30.8 bits (68), Expect = 3.6
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 13 CDNCKKEIPVFNFTIHEIHCQRNIGMCPTC-----KEPFPKS-DMETHMAAEHCQV-TCK 65
CDNC + + IH+ +C +C C +E P D++ A C T
Sbjct: 189 CDNCAASMAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAPIPCTFSTFG 248
Query: 66 CNKKLEKRLLKKH--EETECPLRL 87
C++K+++ L +H E T+ +R+
Sbjct: 249 CHEKMQRNHLARHLQENTQSHMRM 272
>gi|4759254 TNF receptor-associated factor 6 [Homo sapiens]
Length = 522
Score = 45.4 bits (106), Expect = 1e-04
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 14 DNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAE--HCQVTC-KCNKKL 70
+ C ++ + + H+ HC+ + CP C+ PF K + H+ + QV+C C +
Sbjct: 137 EGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASM 196
Query: 71 EKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHED 107
+ H++ CPL +C++C+ L ++ H D
Sbjct: 197 AFEDKEIHDQ-NCPLANVICEYCNTILIREQMPNHYD 232
Score = 30.8 bits (68), Expect = 3.6
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 13 CDNCKKEIPVFNFTIHEIHCQRNIGMCPTC-----KEPFPKS-DMETHMAAEHCQV-TCK 65
CDNC + + IH+ +C +C C +E P D++ A C T
Sbjct: 189 CDNCAASMAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAPIPCTFSTFG 248
Query: 66 CNKKLEKRLLKKH--EETECPLRL 87
C++K+++ L +H E T+ +R+
Sbjct: 249 CHEKMQRNHLARHLQENTQSHMRM 272
>gi|22027622 TNF receptor-associated factor 4 [Homo sapiens]
Length = 470
Score = 45.1 bits (105), Expect = 2e-04
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 7/126 (5%)
Query: 13 CDN-CKKEIPVFNFTIHEIH-CQRNIGMCPTCKEPFPKSDMETHMAA---EHCQVTCKCN 67
C N C ++ + H H C + C C F E+H E KC
Sbjct: 113 CPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESVYCENKCG 172
Query: 68 KKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGN-CGRNVLVK 126
++ +RLL +H +ECP R C +C E ++ H+ C C N CG + +
Sbjct: 173 ARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAR 232
Query: 127 -DLKTH 131
DL H
Sbjct: 233 EDLPGH 238
Score = 36.6 bits (83), Expect = 0.065
Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 37/150 (24%)
Query: 19 EIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHM-AAEHCQVTC--KCNKKLEKRLL 75
E+ V I IH + C+ P ++ H+ + C +C KL +R L
Sbjct: 73 EVQVLGLPIRCIHSEEG------CRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDL 126
Query: 76 KKHEETECPLRLAVCQHCDLELSILKLKEHE-----------DYCGAR------------ 112
H + +CP R C+ C + S + HE + CGAR
Sbjct: 127 PAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESVYCENKCGARMMRRLLAQHATS 186
Query: 113 -----TELCGNCGRNVLVKDLKTHPEVCGR 137
T+ C C + + +++H C R
Sbjct: 187 ECPKRTQPCTYCTKEFVFDTIQSHQYQCPR 216
>gi|22027620 TNF receptor-associated factor 3 isoform 2 [Homo
sapiens]
Length = 543
Score = 42.7 bits (99), Expect = 0.001
Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Query: 66 CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDY-CGARTELCGN-CGRNV 123
C +K+ ++ L+ H E C R A C HC ++ ++ L++HED C C + C
Sbjct: 153 CKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQT 212
Query: 124 LVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMRLPR 183
L++ T+ ++ E V + + W S L + + ++
Sbjct: 213 LLRSEGTNQQIKAHEASSAVQHVNLL-----KEWSNSLEKKVSLLQNESVEKNKSIQSLH 267
Query: 184 RPLRAFESDVFHNRTTNQRNITAQVSIQNNLFEEQER-QERNRGQQPPKEGGEESANLDF 242
+ +FE ++ + + N + + +Q + + E+ +E ++ +P ++ EE+ ++
Sbjct: 268 NQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKS 327
Query: 243 MLALSLQN 250
+ SLQN
Sbjct: 328 SVE-SLQN 334
>gi|22027612 TNF receptor-associated factor 2 [Homo sapiens]
Length = 501
Score = 42.4 bits (98), Expect = 0.001
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 25/111 (22%)
Query: 28 HEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTCKCNKKLEKRLLKKHEETECPLRL 87
HE C + CP CK + E H+ E ECP R
Sbjct: 125 HEGRCPLMLTECPACKGLVRLGEKERHL------------------------EHECPERS 160
Query: 88 AVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKD-LKTHPEVCGR 137
C+HC +K H + C C CG+ + ++ + H + CG+
Sbjct: 161 LSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCGK 211
Score = 36.6 bits (83), Expect = 0.065
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 50 DMETHMAAEHCQVTCKCNKKLEKRLLKKHE---ETECPLRLAVCQHCDLELSILKLKEH- 105
D E C + K LK++E E CPL L C C + + + + H
Sbjct: 93 DNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKERHL 152
Query: 106 EDYCGARTELCGNCGRNVLVKDLKTHPEVC 135
E C R+ C +C D+K H EVC
Sbjct: 153 EHECPERSLSCRHCRAPCCGADVKAHHEVC 182
>gi|22027627 TNF receptor-associated factor 5 [Homo sapiens]
Length = 557
Score = 42.4 bits (98), Expect = 0.001
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 3 EFLDDQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHC-- 60
E + QE + CK+E V N ++ C P C + H+ + C
Sbjct: 86 EVIKSQEVFKDNCCKRE--VLNLYVY---CSN----APGCNAKVILGRYQDHL--QQCLF 134
Query: 61 -QVTC---KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHED-YCGARTEL 115
V C KC + + ++ LK+H C R C +C ++ ++ L+ HE+ C
Sbjct: 135 QPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVF 194
Query: 116 C-GNCGRNVLVKDLKTHPEVC 135
C NC + +L ++ H VC
Sbjct: 195 CPNNCAKIILKTEVDEHLAVC 215
>gi|77404348 TNF receptor-associated factor 5 [Homo sapiens]
Length = 557
Score = 42.4 bits (98), Expect = 0.001
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 3 EFLDDQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHC-- 60
E + QE + CK+E V N ++ C P C + H+ + C
Sbjct: 86 EVIKSQEVFKDNCCKRE--VLNLYVY---CSN----APGCNAKVILGRYQDHL--QQCLF 134
Query: 61 -QVTC---KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHED-YCGARTEL 115
V C KC + + ++ LK+H C R C +C ++ ++ L+ HE+ C
Sbjct: 135 QPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVF 194
Query: 116 C-GNCGRNVLVKDLKTHPEVC 135
C NC + +L ++ H VC
Sbjct: 195 CPNNCAKIILKTEVDEHLAVC 215
>gi|11321603 TNF receptor-associated factor 5 [Homo sapiens]
Length = 557
Score = 42.4 bits (98), Expect = 0.001
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 3 EFLDDQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHC-- 60
E + QE + CK+E V N ++ C P C + H+ + C
Sbjct: 86 EVIKSQEVFKDNCCKRE--VLNLYVY---CSN----APGCNAKVILGRYQDHL--QQCLF 134
Query: 61 -QVTC---KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHED-YCGARTEL 115
V C KC + + ++ LK+H C R C +C ++ ++ L+ HE+ C
Sbjct: 135 QPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVF 194
Query: 116 C-GNCGRNVLVKDLKTHPEVC 135
C NC + +L ++ H VC
Sbjct: 195 CPNNCAKIILKTEVDEHLAVC 215
>gi|25014093 zinc finger protein 585B [Homo sapiens]
Length = 769
Score = 41.6 bits (96), Expect = 0.002
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 20/150 (13%)
Query: 3 EFLDDQETRL------CDNCKKEIPVFN--FTIHEIHCQRNIGMCPTCKEPFP-KSDM-- 51
EF+ Q+T + C+ C K + F H IH + C C + FP SD+
Sbjct: 172 EFITHQKTHMREKPPKCNECGKSFFQVSSLFRHHRIHTGEKLYECSECGKGFPYNSDLSI 231
Query: 52 --ETHMAAEHCQVTCKCNKKL-EKRLLKKHEETECPLRLAVCQHCDLELSILK---LKEH 105
+ H H + T C K +K LK H++ R +C C + I K +
Sbjct: 232 HEKIHTGERHHECT-DCGKAFTQKSTLKIHQKIHTGERSYICIECG-QAFIQKTQLIAHR 289
Query: 106 EDYCGARTELCGNCGRNVLVK-DLKTHPEV 134
+ G + C NCG++ + K L+ H V
Sbjct: 290 RIHSGEKPYECNNCGKSFISKSQLQVHQRV 319
>gi|22027616 TNF receptor-associated factor 3 isoform 1 [Homo
sapiens]
Length = 568
Score = 40.4 bits (93), Expect = 0.005
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 66 CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDY-CGARTELCGN-CGRNV 123
C +K+ ++ L+ H E C R A C HC ++ ++ L++HED C C + C
Sbjct: 153 CKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQT 212
Query: 124 LVK-DLKTHPEVC 135
L++ +L H C
Sbjct: 213 LLRSELSAHLSEC 225
Score = 30.8 bits (68), Expect = 3.6
Identities = 49/222 (22%), Positives = 88/222 (39%), Gaps = 30/222 (13%)
Query: 13 CDNCKKEIPVFNFTIHE-IHCQRNIGMCP-TCK-EPFPKSDMETHMA-AEHCQVTCK--- 65
C +CK ++P+ HE C + CP C + +S++ H++ + TC
Sbjct: 177 CSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKR 236
Query: 66 --CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGN--CGR 121
C + + +K HE + + QH +L LKE + + L N +
Sbjct: 237 YGCVFQGTNQQIKAHEAS------SAVQHVNL------LKEWSNSLEKKVSLLQNESVEK 284
Query: 122 NVLVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMRL 181
N ++ L H ++C E E +R + + N Q I ++ L++++ P R
Sbjct: 285 NKSIQSL--HNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQ 342
Query: 182 PRRPLRAFESDV--FHNRTTNQRNI---TAQVSIQNNLFEEQ 218
+ +S V NR T ++ QV+ L E Q
Sbjct: 343 NWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQ 384
>gi|22027618 TNF receptor-associated factor 3 isoform 1 [Homo
sapiens]
Length = 568
Score = 40.4 bits (93), Expect = 0.005
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 66 CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDY-CGARTELCGN-CGRNV 123
C +K+ ++ L+ H E C R A C HC ++ ++ L++HED C C + C
Sbjct: 153 CKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQT 212
Query: 124 LVK-DLKTHPEVC 135
L++ +L H C
Sbjct: 213 LLRSELSAHLSEC 225
Score = 30.8 bits (68), Expect = 3.6
Identities = 49/222 (22%), Positives = 88/222 (39%), Gaps = 30/222 (13%)
Query: 13 CDNCKKEIPVFNFTIHE-IHCQRNIGMCP-TCK-EPFPKSDMETHMA-AEHCQVTCK--- 65
C +CK ++P+ HE C + CP C + +S++ H++ + TC
Sbjct: 177 CSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKR 236
Query: 66 --CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGN--CGR 121
C + + +K HE + + QH +L LKE + + L N +
Sbjct: 237 YGCVFQGTNQQIKAHEAS------SAVQHVNL------LKEWSNSLEKKVSLLQNESVEK 284
Query: 122 NVLVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMRL 181
N ++ L H ++C E E +R + + N Q I ++ L++++ P R
Sbjct: 285 NKSIQSL--HNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQ 342
Query: 182 PRRPLRAFESDV--FHNRTTNQRNI---TAQVSIQNNLFEEQ 218
+ +S V NR T ++ QV+ L E Q
Sbjct: 343 NWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQ 384
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 39.7 bits (91), Expect = 0.008
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 419 PRRRVRHQGDLSSGYLDDTKQETANGPTSCLPPSRPINNMTATYNQLSRSTSGPRPGCQP 478
PR++V + +S L + P S LPP PI+ + + + S +TS P P
Sbjct: 464 PRKKVSQKQSCTSHVLATGTTQKLKPPPSSLPPPTPISGQSPSSQKSSTATSSPSPQSSS 523
Query: 479 SSPCVPKLSN 488
S VP LS+
Sbjct: 524 SQCSVPSLSS 533
>gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens]
Length = 1156
Score = 38.9 bits (89), Expect = 0.013
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 26/129 (20%)
Query: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGM--CPTCKEPFPK-SDMETHMAAEHCQVT 63
DQ+T C C + + + N G CPTCK+ FP ++ H+ + H +
Sbjct: 580 DQKTYSCIFCPESFDRLDLLKDHVAIHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKI 639
Query: 64 CKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNV 123
+C TEC A C+ L L +L+ + +D+ LC CG+
Sbjct: 640 YQC--------------TECD--KAFCRPDKLRLHMLRHSDRKDF------LCSTCGKQF 677
Query: 124 LVKD-LKTH 131
KD L+ H
Sbjct: 678 KRKDKLREH 686
>gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens]
Length = 1023
Score = 38.9 bits (89), Expect = 0.013
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 26/129 (20%)
Query: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGM--CPTCKEPFPK-SDMETHMAAEHCQVT 63
DQ+T C C + + + N G CPTCK+ FP ++ H+ + H +
Sbjct: 494 DQKTYSCIFCPESFDRLDLLKDHVAIHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKI 553
Query: 64 CKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNV 123
+C TEC A C+ L L +L+ + +D+ LC CG+
Sbjct: 554 YQC--------------TECD--KAFCRPDKLRLHMLRHSDRKDF------LCSTCGKQF 591
Query: 124 LVKD-LKTH 131
KD L+ H
Sbjct: 592 KRKDKLREH 600
>gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens]
Length = 1160
Score = 38.9 bits (89), Expect = 0.013
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 26/129 (20%)
Query: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGM--CPTCKEPFPK-SDMETHMAAEHCQVT 63
DQ+T C C + + + N G CPTCK+ FP ++ H+ + H +
Sbjct: 584 DQKTYSCIFCPESFDRLDLLKDHVAIHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKI 643
Query: 64 CKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNV 123
+C TEC A C+ L L +L+ + +D+ LC CG+
Sbjct: 644 YQC--------------TECD--KAFCRPDKLRLHMLRHSDRKDF------LCSTCGKQF 681
Query: 124 LVKD-LKTH 131
KD L+ H
Sbjct: 682 KRKDKLREH 690
>gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens]
Length = 1061
Score = 38.9 bits (89), Expect = 0.013
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 26/129 (20%)
Query: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGM--CPTCKEPFPK-SDMETHMAAEHCQVT 63
DQ+T C C + + + N G CPTCK+ FP ++ H+ + H +
Sbjct: 498 DQKTYSCIFCPESFDRLDLLKDHVAIHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKI 557
Query: 64 CKCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNV 123
+C TEC A C+ L L +L+ + +D+ LC CG+
Sbjct: 558 YQC--------------TECD--KAFCRPDKLRLHMLRHSDRKDF------LCSTCGKQF 595
Query: 124 LVKD-LKTH 131
KD L+ H
Sbjct: 596 KRKDKLREH 604
>gi|134142822 zinc finger protein 133 [Homo sapiens]
Length = 653
Score = 37.7 bits (86), Expect = 0.029
Identities = 36/127 (28%), Positives = 49/127 (38%), Gaps = 17/127 (13%)
Query: 27 IHE-IHCQRNIGMCPTCKEPFP-KSDMETHM---AAEHCQVTCKCNKKL-EKRLLKKHEE 80
IHE H MC C F KS++ H + E V +C K +K + +H+
Sbjct: 286 IHERTHSGEKPYMCSECGRGFSQKSNLIIHQRTHSGEKPYVCRECGKGFSQKSAVVRHQR 345
Query: 81 TECPLRLAVCQHCDLELSILK--LKEHEDYCGARTELCGNCG-----RNVLVKDLKTH-- 131
T + VC C L S + + G + C CG R LV +TH
Sbjct: 346 THLEEKTIVCSDCGLGFSDRSNLISHQRTHSGEKPYACKECGRCFRQRTTLVNHQRTHSK 405
Query: 132 --PEVCG 136
P VCG
Sbjct: 406 EKPYVCG 412
Score = 30.0 bits (66), Expect = 6.1
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 21/134 (15%)
Query: 31 HCQRNIGMCPTCKEPFP-KSDMETHMAAEHCQ--VTCK-CNKKLEKRL-LKKHEET---E 82
H + +C C F +S++ +H + CK C + +R L H+ T E
Sbjct: 347 HLEEKTIVCSDCGLGFSDRSNLISHQRTHSGEKPYACKECGRCFRQRTTLVNHQRTHSKE 406
Query: 83 CPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKD-LKTHPEV------- 134
P VC H + S L + + G + +CG CGR +K L H +
Sbjct: 407 KPYVCGVCGHSFSQNSTL-ISHRRTHTGEKPYVCGVCGRGFSLKSHLNRHQNIHSGEKPI 465
Query: 135 ----CGREGEEKRN 144
CGR ++ N
Sbjct: 466 VCKDCGRGFSQQSN 479
>gi|27545332 zinc finger protein 133 [Homo sapiens]
Length = 653
Score = 37.7 bits (86), Expect = 0.029
Identities = 36/127 (28%), Positives = 49/127 (38%), Gaps = 17/127 (13%)
Query: 27 IHE-IHCQRNIGMCPTCKEPFP-KSDMETHM---AAEHCQVTCKCNKKL-EKRLLKKHEE 80
IHE H MC C F KS++ H + E V +C K +K + +H+
Sbjct: 286 IHERTHSGEKPYMCSECGRGFSQKSNLIIHQRTHSGEKPYVCRECGKGFSQKSAVVRHQR 345
Query: 81 TECPLRLAVCQHCDLELSILK--LKEHEDYCGARTELCGNCG-----RNVLVKDLKTH-- 131
T + VC C L S + + G + C CG R LV +TH
Sbjct: 346 THLEEKTIVCSDCGLGFSDRSNLISHQRTHSGEKPYACKECGRCFRQRTTLVNHQRTHSK 405
Query: 132 --PEVCG 136
P VCG
Sbjct: 406 EKPYVCG 412
Score = 30.0 bits (66), Expect = 6.1
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 21/134 (15%)
Query: 31 HCQRNIGMCPTCKEPFP-KSDMETHMAAEHCQ--VTCK-CNKKLEKRL-LKKHEET---E 82
H + +C C F +S++ +H + CK C + +R L H+ T E
Sbjct: 347 HLEEKTIVCSDCGLGFSDRSNLISHQRTHSGEKPYACKECGRCFRQRTTLVNHQRTHSKE 406
Query: 83 CPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKD-LKTHPEV------- 134
P VC H + S L + + G + +CG CGR +K L H +
Sbjct: 407 KPYVCGVCGHSFSQNSTL-ISHRRTHTGEKPYVCGVCGRGFSLKSHLNRHQNIHSGEKPI 465
Query: 135 ----CGREGEEKRN 144
CGR ++ N
Sbjct: 466 VCKDCGRGFSQQSN 479
>gi|38505215 zinc finger protein 614 [Homo sapiens]
Length = 585
Score = 37.0 bits (84), Expect = 0.050
Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 9/129 (6%)
Query: 7 DQETRLCDNCKKEIPVFNFTI--HEIHCQRNIGMCPTCKEPFP-KSDMETHM---AAEHC 60
++++ +C C K + + I H +C C + F KS++ H E
Sbjct: 283 EEKSYMCSECGKGFTMKRYLIAHQRTHSGEKPYVCKECGKGFTVKSNLIVHQRTHTGEKP 342
Query: 61 QVTCKCNKKLE-KRLLKKHEETECPLRLAVCQHCDLELSILK--LKEHEDYCGARTELCG 117
+ +C K KR L H+ T + +C C ++ + + G ++ +C
Sbjct: 343 YICSECGKGFTMKRYLVVHQRTHTGEKPYMCSECGKGFTVKSNLIVHQRSHTGEKSYICS 402
Query: 118 NCGRNVLVK 126
CG+ VK
Sbjct: 403 ECGKGFTVK 411
>gi|31657109 zinc finger protein 282 [Homo sapiens]
Length = 671
Score = 36.6 bits (83), Expect = 0.065
Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 13/150 (8%)
Query: 13 CDNCKKEIPVFNFTI--HEIHCQRNIGMCPTCKEPFP-KSDMETHMAAEHCQVTCKCNKK 69
C C K V I H H + C C++ F S + H + KC++
Sbjct: 520 CPECGKSFGVRKSLIIHHRSHTKERPYECAECEKSFNCHSGLIRHQMTHRGERPYKCSEC 579
Query: 70 LEKRLLKKHEET-------ECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRN 122
+ K+H + E P + A+C + L LK + G R CG CG++
Sbjct: 580 EKTYSRKEHLQNHQRLHTGERPFQCALCGKSFIRKQNL-LKHQRIHTGERPYTCGECGKS 638
Query: 123 VLVKD-LKTHPEV-CGREGEEKRNEVAIPP 150
K+ LK H V G G ++ PP
Sbjct: 639 FRYKESLKDHLRVHSGGPGPGAPRQLPPPP 668
>gi|113204607 zinc finger protein 157 [Homo sapiens]
Length = 506
Score = 35.8 bits (81), Expect = 0.11
Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 20/155 (12%)
Query: 13 CDNCKKEIPVFNFTI--HEIHCQRNIGMCPTCKEPFPKSDM-----ETHMAAEHCQVTCK 65
C C K ++ I + H C C + F + TH + T +
Sbjct: 192 CGECAKTFSARSYLIAHQKTHTGERPFECNECGKSFGRKSQLILHTRTHTGERPYECT-E 250
Query: 66 CNKKL-EKRLLKKHEETECPLRLAVCQHCD--LELSILKLKEHEDYCGARTELCGNCGRN 122
C K EK L H+ T + C C + I + H + G + CG CG+N
Sbjct: 251 CGKTFSEKATLTIHQRTHTGEKPYECSECGKTFRVKISLTQHHRTHTGEKPYECGECGKN 310
Query: 123 VLV-KDLKTH--------PEVCGREGEEKRNEVAI 148
K L H P CG G+ R ++ +
Sbjct: 311 FRAKKSLNQHQRIHTGEKPYECGECGKFFRMKMTL 345
>gi|24432013 zinc finger protein 668 [Homo sapiens]
Length = 619
Score = 34.7 bits (78), Expect = 0.25
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 66 CNKKL-EKRLLKKHEETECPLRLAVCQHCDLELSILK-LKEHE-DYCGARTELCGNCGRN 122
C K + + +KH T LR C+ C + LK L+ HE + G R LC CG++
Sbjct: 173 CGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPFLCSECGKS 232
Score = 33.1 bits (74), Expect = 0.72
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 38 MCPTCKEPFPKSDMETHMAAEHCQVT----CKCNKKLEKRL-LKKHEETECPLRLAVCQH 92
+C CKE F + H ++ +C K R L+KH T +R C H
Sbjct: 517 VCRECKETFSTMTLLRRHERSHPELRPFPCTQCGKSFSDRAGLRKHSRTHSSVRPYTCPH 576
Query: 93 CDLE-LSILKLKEHE 106
C LS L++HE
Sbjct: 577 CPKAFLSASDLRKHE 591
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 34.3 bits (77), Expect = 0.32
Identities = 57/227 (25%), Positives = 72/227 (31%), Gaps = 64/227 (28%)
Query: 395 TATNHVTEGIPRLDSQPQETSPELPRRRVRHQGDLSSGYLDDTKQETANGPTSCLPPSRP 454
T++ H TE RL Q Q RR R D ++E A P +P SR
Sbjct: 96 TSSGHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAP---VPTSRG 152
Query: 455 INNMTATYNQLSRSTSGPRPGCQPSSPCVPKLSNSDSQDIQGRNRDSQNGAIAP-----G 509
Q R +G + S +S S D QG + A AP G
Sbjct: 153 HRTEKRKRQQPQRRPAGGTGQRRGSG-------SSPSADQQGAQDREEEAAAAPAPTSRG 205
Query: 510 HVSVIRPPQNLYPENIVPSFSPGPSGRYGASGRSEGGRNS---------------RVTPA 554
H + R PQ P P G +G+ G R+S PA
Sbjct: 206 HRTEKRKPQQ-------PQCRPA-----GGTGQRRGSRSSPSADQQRAQDREEEAAAAPA 253
Query: 555 AANYRSRTAKAKPSK----------------------QQGAGDAEEE 579
+ RT K KP + QQGA D EEE
Sbjct: 254 PTSRGHRTEKRKPQQPQRRPAGGTGQRRGSGYSPSADQQGAQDREEE 300
>gi|138175817 zinc finger protein 236 [Homo sapiens]
Length = 1845
Score = 34.3 bits (77), Expect = 0.32
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 13 CDNCKKEIPV-FNFTIHEIHCQRNIGMCPTCKEPFPK-SDMETHMAAEHCQVTCKCNK-- 68
CD C + V FN T+H+ CP C + F + + ++ H+ + C++
Sbjct: 68 CDQCPQTFNVEFNLTLHKCTHSGEDPTCPVCNKKFSRVASLKAHIMLHEKEENLICSECG 127
Query: 69 ---KLEKRL---LKKHEETECPLRLAVCQHCDLEL-SILKLKEH 105
L+ +L +++H + R C+ C E + +LKEH
Sbjct: 128 DEFTLQSQLAVHMEEHRQELAGTRQHACKACKKEFETSSELKEH 171
Score = 31.2 bits (69), Expect = 2.7
Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 17/123 (13%)
Query: 13 CDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFP-----KSDMETHMAAEHCQ------ 61
CD V E+H + I CP C++ F K M+TH A
Sbjct: 1662 CDRAFSSAAVLMHHSKEVHGRERIHGCPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRV 1721
Query: 62 VTC-KCNKKLEK-RLLKKHEET---ECPLRLAVCQHCDLELSILKLKEHEDYCGARTELC 116
C C K K L++H E P +C+ + S L++ + + G R C
Sbjct: 1722 FKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQV-HMKKHTGERPYKC 1780
Query: 117 GNC 119
C
Sbjct: 1781 AYC 1783
>gi|41349476 PR domain containing 5 [Homo sapiens]
Length = 630
Score = 34.3 bits (77), Expect = 0.32
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 30 IHCQRNIG----MCPTCKEPFPKSD-METHMAAEHCQVTCKCNKKL----EKRLLKKHEE 80
+H + + G CP C++ F K+D ++ H+ + KC++ +KR L +H+
Sbjct: 506 VHIRSHTGERPYQCPYCEKGFSKNDGLKMHIRTHTREKPYKCSECSKAFSQKRGLDEHKR 565
Query: 81 TECPLRLAVCQHCDLELSILKL 102
T + C CDL S+ K+
Sbjct: 566 THTGEKPFQCDVCDLAFSLKKM 587
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 34.3 bits (77), Expect = 0.32
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 8/163 (4%)
Query: 408 DSQPQETSPELPRRRVRHQGDLSSGYLDDTKQETANGPTSCLPPSRPINNMTATYNQLSR 467
+ +P E +P +RR SS + +++ +S S ++ +++ + S
Sbjct: 2592 EGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSP 2651
Query: 468 STSGPRPGCQPSSPCVP----KLSNSDSQDIQGRNRDSQNGAIAPGHVSVIRPPQNLYPE 523
+ GP+ +P+SP P + S S + I RDS++ + +P V RP P
Sbjct: 2652 AKPGPQALPKPASPKKPPPGERRSRSPRKPIDSL-RDSRSLSYSP--VERRRPSPQPSPR 2708
Query: 524 NIVPSFSPGPSGR-YGASGRSEGGRNSRVTPAAANYRSRTAKA 565
+ S S S R RS + R TP+ R R++++
Sbjct: 2709 DQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMRHRSSRS 2751
Score = 32.0 bits (71), Expect = 1.6
Identities = 39/180 (21%), Positives = 63/180 (35%), Gaps = 5/180 (2%)
Query: 401 TEGIPRLDSQPQETS-PELPRRRVRHQGDLSSGYLDDTKQETANGPTSCLPPSRPINNMT 459
+ G DS P+ + P+ PR R R T Q +G S +
Sbjct: 1474 SRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVART-- 1531
Query: 460 ATYNQLSRSTSGPRPGCQPSSPCVPKLSNSDSQDIQGRNRDSQNGAIAPGHVSVIRPPQN 519
Q SRS S +PS+ + + S D + + R G +
Sbjct: 1532 -PLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSR 1590
Query: 520 LYPENIVPSFSPGPSGRYGASGRSEGGRNSRVTPAAANYRSRTAKAKP-SKQQGAGDAEE 578
L P SP + A+ R++ G +S P A R+ +++ S +G G + E
Sbjct: 1591 LSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPE 1650
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,789,841
Number of Sequences: 37866
Number of extensions: 1392712
Number of successful extensions: 4720
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 4520
Number of HSP's gapped (non-prelim): 313
length of query: 582
length of database: 18,247,518
effective HSP length: 108
effective length of query: 474
effective length of database: 14,157,990
effective search space: 6710887260
effective search space used: 6710887260
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.