Guide to the Human Genome
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Name: FLJ36031 Sequence: fasta or formatted (235aa) NCBI GI: 57242766
Description:

hypothetical protein LOC168455

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.2         31           4
 C cysteine            1.7          4           1
 D aspartate           3.4          8           1
 E glutamate           5.1         12           2
 F phenylalanine       3.8          9           1
 G glycine             6.0         14           2
 H histidine           0.9          2           1
 I isoleucine          1.3          3           1
 K lysine              3.4          8           1
 L leucine             6.8         16           1
 M methionine          2.1          5           1
 N asparagine          0.4          1           1
 P proline            12.8         30           9
 Q glutamine           1.7          4           1
 R arginine           17.9         42           6
 S serine              7.2         17           2
 T threonine           4.3         10           2
 V valine              5.5         13           2
 W tryptophan          1.3          3           1
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC168455 
CCDC71                0.088   coiled-coil domain containing 71 
C9orf75               0.059   hypothetical protein LOC286262 isoform 2 
C9orf75               0.059   hypothetical protein LOC286262 isoform 1 
HOXB4                 0.042   homeobox B4 
LOC729370             0.042   PREDICTED: hypothetical protein 
BAI1                  0.042   brain-specific angiogenesis inhibitor 1 precursor [...
LOC645529             0.040   PREDICTED: similar to Putative acrosin-like proteas...
MLL4                  0.040   myeloid/lymphoid or mixed-lineage leukemia 4 
ZCCHC2                0.040   zinc finger, CCHC domain containing 2 
SAMD1                 0.040   sterile alpha motif domain containing 1 
ACR                   0.040   acrosin precursor 
ATOH8                 0.037   atonal homolog 8 
SYNPO                 0.037   synaptopodin isoform A 
RAPH1                 0.037   Ras association and pleckstrin homology domains 1 is...
PCLO                  0.037   piccolo isoform 2 
PCLO                  0.037   piccolo isoform 1 
ZFPM1                 0.037   zinc finger protein, multitype 1 
FAM83E                0.037   hypothetical protein LOC54854 
BPTF                  0.037   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.037   bromodomain PHD finger transcription factor isoform ...
RANBP9                0.035   RAN binding protein 9 
FMN1                  0.035   formin 1 
LTBP1                 0.035   latent transforming growth factor beta binding prote...
LOC100131880          0.035   PREDICTED: hypothetical protein 
C1QL4                 0.035   complement component 1, q subcomponent-like 4 
ESPN                  0.035   espin 
NCOR1                 0.033   nuclear receptor co-repressor 1 
LOC100128074          0.033   PREDICTED: hypothetical protein 
ZFHX4                 0.033   zinc finger homeodomain 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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