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Search of human proteins with 56181387
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56181387 STIP1 homology and U-box containing protein 1 [Homo
sapiens]
(303 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56181387 STIP1 homology and U-box containing protein 1 [Homo ... 617 e-177
gi|24308141 small glutamine-rich tetratricopeptide repeat (TPR)-... 75 7e-14
gi|29725607 smooth muscle cell associated protein-1 isoform 2 [H... 69 5e-12
gi|21361356 translocase of outer mitochondrial membrane 34 [Homo... 68 9e-12
gi|90669931 tetratricopeptide repeat domain 12 [Homo sapiens] 67 1e-11
gi|4506921 small glutamine-rich tetratricopeptide [Homo sapiens] 67 3e-11
gi|22095349 WD and tetratricopeptide repeats 1 [Homo sapiens] 66 4e-11
gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... 64 1e-10
gi|54607135 translocase of outer mitochondrial membrane 70 homol... 64 1e-10
gi|89179321 smooth muscle cell associated protein-1 isoform 3 [H... 64 1e-10
gi|27262638 sperm associated antigen 1 [Homo sapiens] 64 1e-10
gi|27262636 sperm associated antigen 1 [Homo sapiens] 64 1e-10
gi|5453958 protein phosphatase 5, catalytic subunit [Homo sapiens] 64 2e-10
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 63 4e-10
gi|225735593 RNA polymerase II associated protein 3 isoform 2 [H... 59 4e-09
gi|225735591 RNA polymerase II associated protein 3 isoform 1 [H... 59 4e-09
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 59 4e-09
gi|225735595 RNA polymerase II associated protein 3 isoform 3 [H... 59 7e-09
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 59 7e-09
gi|75750484 cardiomyopathy associated 4 isoform 2 [Homo sapiens] 58 9e-09
gi|27477061 cardiomyopathy associated 4 isoform 1 [Homo sapiens] 58 9e-09
gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Hom... 57 2e-08
gi|19923193 heat shock 70kD protein binding protein [Homo sapiens] 57 2e-08
gi|224809329 FK506 binding protein 5 isoform 1 [Homo sapiens] 55 1e-07
gi|224809327 FK506 binding protein 5 isoform 1 [Homo sapiens] 55 1e-07
gi|4758384 FK506 binding protein 5 isoform 1 [Homo sapiens] 55 1e-07
gi|4503729 FK506 binding protein 52 [Homo sapiens] 53 3e-07
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 52 6e-07
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens] 51 1e-06
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens] 51 1e-06
>gi|56181387 STIP1 homology and U-box containing protein 1 [Homo
sapiens]
Length = 303
Score = 617 bits (1590), Expect = e-177
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MKGKEEKEGGARLGAGGGSPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA 60
MKGKEEKEGGARLGAGGGSPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA
Sbjct: 1 MKGKEEKEGGARLGAGGGSPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA 60
Query: 61 VYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRA 120
VYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRA
Sbjct: 61 VYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRA 120
Query: 121 YSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEEC 180
YSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEEC
Sbjct: 121 YSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEEC 180
Query: 181 QRNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELM 240
QRNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELM
Sbjct: 181 QRNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELM 240
Query: 241 REPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGWV 300
REPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGWV
Sbjct: 241 REPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGWV 300
Query: 301 EDY 303
EDY
Sbjct: 301 EDY 303
>gi|24308141 small glutamine-rich tetratricopeptide repeat
(TPR)-containing, beta [Homo sapiens]
Length = 304
Score = 75.1 bits (183), Expect = 7e-14
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 20 PEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQA 79
PE A +LK++GN Y A CY +AI +P AVYY NRA K+ + A
Sbjct: 79 PEDVGKADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDA 138
Query: 80 LADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSAL 139
+ DC +A+ +D + KA+ +G + ++EA+ + Q+A L E D S L
Sbjct: 139 IKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDLDPE-----NDSYKSNL 193
Query: 140 RIAKKK 145
+IA++K
Sbjct: 194 KIAEQK 199
>gi|29725607 smooth muscle cell associated protein-1 isoform 2 [Homo
sapiens]
Length = 944
Score = 68.9 bits (167), Expect = 5e-12
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 19/157 (12%)
Query: 15 AGGGSPEKSP------SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---AVYYTN 65
+G G+PE P S ++L+++GN LF Y A A Y +A+ + AV + N
Sbjct: 4 SGPGTPEPRPATPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRN 63
Query: 66 RALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 125
RA C+LK++ +++A + +A+E DG VKA + Q ++ D+A+ +LQR SL
Sbjct: 64 RAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEP 123
Query: 126 EQRLNFGDDIPSALR-----IAKKKRWNSIEERRIHQ 157
+ ++ ALR I +K R+ S + ++ Q
Sbjct: 124 KNKV-----FQEALRNIGGQIQEKVRYMSSTDAKVEQ 155
>gi|21361356 translocase of outer mitochondrial membrane 34 [Homo
sapiens]
Length = 309
Score = 68.2 bits (165), Expect = 9e-12
Identities = 33/92 (35%), Positives = 56/92 (60%)
Query: 26 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRR 85
A+ LKE+GN L + +A Y ++ + L + Y+NRALCYL ++Q+ +A+ DC
Sbjct: 193 ARVLKEEGNELVKKGNHKKAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTE 252
Query: 86 ALELDGQSVKAHFFLGQCQLEMESYDEAIANL 117
AL+LDG++VKA + Q ++ Y + A++
Sbjct: 253 ALKLDGKNVKAFYRRAQAHKALKDYKSSFADI 284
Score = 53.1 bits (126), Expect = 3e-07
Identities = 51/170 (30%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 19 SPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAI-------TRNP-LVAVYYTNRALCY 70
+P+ S +EL+ GN F +Y EA+A YGRA+ + +P +V Y+NRA C+
Sbjct: 2 APKFPDSVEELRAAGNESFRNGQYAEASALYGRALRVLQAQGSSDPEEESVLYSNRAACH 61
Query: 71 LKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYD------------------- 111
LK + DC AL L S+K +E Y
Sbjct: 62 LKDGNCRDCIKDCTSALALVPFSIKPLLRRASAYEALEKYPMAYVDYKTVLQIDDNVTSA 121
Query: 112 -EAIANLQRAY--SLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQE 158
E I + RA SL E RL IP + ++ +KRWNS+ H+E
Sbjct: 122 VEGINRMTRALMDSLGPEWRLKL-PSIP-LVPVSAQKRWNSLPSEN-HKE 168
>gi|90669931 tetratricopeptide repeat domain 12 [Homo sapiens]
Length = 705
Score = 67.4 bits (163), Expect = 1e-11
Identities = 33/90 (36%), Positives = 50/90 (55%)
Query: 21 EKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQAL 80
E A LKE+GN F Y A Y + + + V YTNRA Y+K++ +E+AL
Sbjct: 101 ENKVLADALKEKGNEAFAEGNYETAILRYSEGLEKLKDMKVLYTNRAQAYMKLEDYEKAL 160
Query: 81 ADCRRALELDGQSVKAHFFLGQCQLEMESY 110
DC AL+ D + KA+F +G+ L +++Y
Sbjct: 161 VDCEWALKCDEKCTKAYFHMGKANLALKNY 190
>gi|4506921 small glutamine-rich tetratricopeptide [Homo sapiens]
Length = 313
Score = 66.6 bits (161), Expect = 3e-11
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 19 SPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQ 78
S E S A+ LK +GN + A YG+AI NP AVY+ NRA Y K+ +
Sbjct: 84 SEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAG 143
Query: 79 ALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSA 138
A+ DC RA+ +D KA+ +G + + EA+A ++A L + + S
Sbjct: 144 AVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPD-----NETYKSN 198
Query: 139 LRIAKKK 145
L+IA+ K
Sbjct: 199 LKIAELK 205
>gi|22095349 WD and tetratricopeptide repeats 1 [Homo sapiens]
Length = 676
Score = 65.9 bits (159), Expect = 4e-11
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 21 EKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ---QHE 77
E P + +K+Q N F +++ +A Y +A+ R P A+ Y NRA Y+K + H
Sbjct: 356 ELPPYLERVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHY 415
Query: 78 QALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANL--------QRAYSLAKEQRL 129
AL DC +A+ L+ +KAHF L +C E++ EA+ L ++A+S A +
Sbjct: 416 DALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDA-- 473
Query: 130 NFGDDIPSAL 139
G DI +AL
Sbjct: 474 -LGRDITAAL 482
>gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
protein) [Homo sapiens]
Length = 543
Score = 64.3 bits (155), Expect = 1e-10
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 26 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRR 85
A E K +GN F YP+A Y AI RNP A Y+NRA CY K+ + + AL DC
Sbjct: 360 ALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEE 419
Query: 86 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKK 145
++L+ +K + M+ Y +A+ Q+A L + D +A+
Sbjct: 420 CIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDL--DSSCKEAADGYQRCMMAQYN 477
Query: 146 RWNSIEE--RRIHQESELHSYLS----RLIAAERERE 176
R +S E+ RR + E+ +S RLI + +++
Sbjct: 478 RHDSPEDVKRRAMADPEVQQIMSDPAMRLILEQMQKD 514
Score = 50.8 bits (120), Expect = 1e-06
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 14/167 (8%)
Query: 28 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRAL 87
ELKE+GN+ +A CY AI +P V Y+NR+ Y K +++A D + +
Sbjct: 6 ELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTV 65
Query: 88 EL-----DGQSVKAHF--FLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR 140
+L G S KA FL + + +Y+E + + L KE N R
Sbjct: 66 DLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQL-KEGLQNM------EAR 118
Query: 141 IAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEECQRNHEGD 187
+A++K N ++Q+ E L++ REL E RN D
Sbjct: 119 LAERKFMNPFNMPNLYQKLESDPRTRTLLSDPTYRELIEQLRNKPSD 165
Score = 44.3 bits (103), Expect = 1e-04
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 23/168 (13%)
Query: 20 PEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQA 79
PE A + KE GN + + + A Y +A +P Y TN+A Y + + +
Sbjct: 219 PENKKQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKC 278
Query: 80 LADCRRALELD-------GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFG 132
C +A+E+ Q KA+ +G + E Y +AI + SLA+ +
Sbjct: 279 RELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNK--SLAEHR----- 331
Query: 133 DDIPSALRIAKKKRWNSIEERRIHQESELHSYLSRLIAAERERELEEC 180
P L+ + + +I +E E +Y++ +A E + + EC
Sbjct: 332 --TPDVLKKCQ-------QAEKILKEQERLAYINPDLALEEKNKGNEC 370
>gi|54607135 translocase of outer mitochondrial membrane 70 homolog
A [Homo sapiens]
Length = 608
Score = 64.3 bits (155), Expect = 1e-10
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 4 KEEKEGGARLGAGGGSPEKSPS---------AQELKEQGNRLFVGRKYPEAAACYGRAIT 54
++ EG A G G PE + AQ K +GN+ F KY +A CY AI+
Sbjct: 83 RKTPEGRASPAPGSGHPEGPGAHLDMNSLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAIS 142
Query: 55 -----RNPLVAVYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMES 109
+N ++ +Y NRA + ++Q+ ++ DC +A+EL+ + VKA F + ++++
Sbjct: 143 LCPTEKNVDLSTFYQNRAAAFEQLQKWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDN 202
Query: 110 YDEAIANLQRAYSL---AKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLS 166
E + ++ L +Q + D + L K K E + + SY S
Sbjct: 203 KKECLEDVTAVCILEGFQNQQSMLLADKVLKLLGKEKAKEKYKNREPLMPSPQFIKSYFS 262
Query: 167 R-----LIAAERERELEECQRNHEGD-----EDDSHVRAQQACIEAKHDKYMAD 210
+ + E + ++ EG+ E+ +++A+Q E +DK +++
Sbjct: 263 SFTDDIISQPMLKGEKSDEDKDKEGEALEVKENSGYLKAKQYMEEENYDKIISE 316
Score = 33.9 bits (76), Expect = 0.18
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 40 RKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQH-EQALADCRRALELDGQSVKAHF 98
+++ +A Y + I P A Y ++ L L+ +Q ++ L +A+E+D + A+
Sbjct: 490 QQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQDLDRGLELISKAIEIDNKCDFAYE 549
Query: 99 FLGQCQLEMESYDEAIANLQRAYSLAKEQ 127
+G +++ + ++AI +A +LAK +
Sbjct: 550 TMGTIEVQRGNMEKAIDMFNKAINLAKSE 578
>gi|89179321 smooth muscle cell associated protein-1 isoform 3 [Homo
sapiens]
Length = 929
Score = 64.3 bits (155), Expect = 1e-10
Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 13/141 (9%)
Query: 25 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---AVYYTNRALCYLKMQQHEQALA 81
S ++L+++GN LF Y A A Y +A+ + AV + NRA C+LK++ +++A
Sbjct: 5 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAET 64
Query: 82 DCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR- 140
+ +A+E DG VKA + Q ++ D+A+ +LQR SL + ++ ALR
Sbjct: 65 EASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKV-----FQEALRN 119
Query: 141 ----IAKKKRWNSIEERRIHQ 157
I +K R+ S + ++ Q
Sbjct: 120 IGGQIQEKVRYMSSTDAKVEQ 140
>gi|27262638 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 64.3 bits (155), Expect = 1e-10
Identities = 33/95 (34%), Positives = 53/95 (55%)
Query: 29 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALE 88
LKE+GN+ + Y +A + Y + N YTNRALCYLK+ Q E+A DC +AL+
Sbjct: 626 LKEEGNQCVNDKNYKDALSKYSECLKINNKECAIYTNRALCYLKLCQFEEAKQDCDQALQ 685
Query: 89 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 123
L +VKA + +++Y +++ +L + L
Sbjct: 686 LADGNVKAFYRRALAHKGLKNYQKSLIDLNKVILL 720
Score = 58.5 bits (140), Expect = 7e-09
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 9 GGARLGAGGGSPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITR-NPL-------VA 60
GGA GGG ++P+ LK QGN LF ++ EAA Y AI P ++
Sbjct: 430 GGATGHPGGGQGAENPAG--LKSQGNELFRSGQFAEAAGKYSAAIALLEPAGSEIADDLS 487
Query: 61 VYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEA 113
+ Y+NRA CYLK + DC RALEL S+K +E Y +A
Sbjct: 488 ILYSNRAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMAYETLEQYGKA 540
Score = 57.0 bits (136), Expect = 2e-08
Identities = 60/211 (28%), Positives = 81/211 (38%), Gaps = 26/211 (12%)
Query: 15 AGGGSPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ 74
AG EK A KE+GN F Y EA Y R+I+ P V V Y NRA +K+Q
Sbjct: 198 AGLTEKEKDFLATREKEKGNEAFNSGDYEEAVMYYTRSISALPTV-VAYNNRAQAEIKLQ 256
Query: 75 QHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 134
A DC + LEL+ +VKA EA +L + + + L
Sbjct: 257 NWNSAFQDCEKVLELEPGNVKALLRRATTYKHQNKLREATEDLSKVLDVEPDNDL----- 311
Query: 135 IPSALRIAKKKRWNSIEERRIHQE--SELHSYLSRLIAAERERELEE---CQRNHE---G 186
KK + +E + E SE + R++ E E +E R HE G
Sbjct: 312 --------AKKTLSEVERDLKNSEAASETQTKGKRMVIQEIENSEDEEGKSGRKHEDGGG 363
Query: 187 D----EDDSHVRAQQACIEAKHDKYMADMDE 213
D E RA Q C+ K + E
Sbjct: 364 DKKPAEPAGAARAAQPCVMGNIQKKLTGKAE 394
>gi|27262636 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 64.3 bits (155), Expect = 1e-10
Identities = 33/95 (34%), Positives = 53/95 (55%)
Query: 29 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALE 88
LKE+GN+ + Y +A + Y + N YTNRALCYLK+ Q E+A DC +AL+
Sbjct: 626 LKEEGNQCVNDKNYKDALSKYSECLKINNKECAIYTNRALCYLKLCQFEEAKQDCDQALQ 685
Query: 89 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 123
L +VKA + +++Y +++ +L + L
Sbjct: 686 LADGNVKAFYRRALAHKGLKNYQKSLIDLNKVILL 720
Score = 58.5 bits (140), Expect = 7e-09
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 9 GGARLGAGGGSPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITR-NPL-------VA 60
GGA GGG ++P+ LK QGN LF ++ EAA Y AI P ++
Sbjct: 430 GGATGHPGGGQGAENPAG--LKSQGNELFRSGQFAEAAGKYSAAIALLEPAGSEIADDLS 487
Query: 61 VYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEA 113
+ Y+NRA CYLK + DC RALEL S+K +E Y +A
Sbjct: 488 ILYSNRAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMAYETLEQYGKA 540
Score = 57.0 bits (136), Expect = 2e-08
Identities = 60/211 (28%), Positives = 81/211 (38%), Gaps = 26/211 (12%)
Query: 15 AGGGSPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQ 74
AG EK A KE+GN F Y EA Y R+I+ P V V Y NRA +K+Q
Sbjct: 198 AGLTEKEKDFLATREKEKGNEAFNSGDYEEAVMYYTRSISALPTV-VAYNNRAQAEIKLQ 256
Query: 75 QHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 134
A DC + LEL+ +VKA EA +L + + + L
Sbjct: 257 NWNSAFQDCEKVLELEPGNVKALLRRATTYKHQNKLREATEDLSKVLDVEPDNDL----- 311
Query: 135 IPSALRIAKKKRWNSIEERRIHQE--SELHSYLSRLIAAERERELEE---CQRNHE---G 186
KK + +E + E SE + R++ E E +E R HE G
Sbjct: 312 --------AKKTLSEVERDLKNSEAASETQTKGKRMVIQEIENSEDEEGKSGRKHEDGGG 363
Query: 187 D----EDDSHVRAQQACIEAKHDKYMADMDE 213
D E RA Q C+ K + E
Sbjct: 364 DKKPAEPAGAARAAQPCVMGNIQKKLTGKAE 394
>gi|5453958 protein phosphatase 5, catalytic subunit [Homo sapiens]
Length = 499
Score = 63.9 bits (154), Expect = 2e-10
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 26 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRR 85
A+ELK Q N F + Y A Y +AI NP A+YY NR+L YL+ + + AL D R
Sbjct: 28 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATR 87
Query: 86 ALELDGQSVKAHF-------FLGQCQLEMESYDEAI 114
A+ELD + +K ++ LG+ + + Y+ +
Sbjct: 88 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVV 123
>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
[Homo sapiens]
Length = 494
Score = 62.8 bits (151), Expect = 4e-10
Identities = 35/103 (33%), Positives = 52/103 (50%)
Query: 21 EKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQAL 80
E A+ KEQGN + + Y EA Y +AI P A YY NRA + + + +AL
Sbjct: 23 EAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREAL 82
Query: 81 ADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 123
D ++++ LD V+ H G+C L + + A + QRA L
Sbjct: 83 GDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALEL 125
Score = 59.7 bits (143), Expect = 3e-09
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 30 KEQGNRLFVGRKYPEAAACYGRAITRNP----LVAVYYTNRALCYLKMQQHEQALADCRR 85
KE GN+ F Y A Y A+ +P A Y NR K+++ + A+ DC
Sbjct: 260 KEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTN 319
Query: 86 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK-EQRLNFGDDIPSALRIAKK 144
A++LD +KA+ QC ++ E Y+EA+ + ++ Y K ++ + LR +K+
Sbjct: 320 AVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLELRKSKR 379
Query: 145 KRWNSIEERRIHQESELHSYLSRLIAAERERELEECQRNHEGDEDDSHVRAQQACIEAKH 204
K + I + ++ + A R+R L H G A ++ +
Sbjct: 380 KDYYKI------LGVDKNASEDEIKKAYRKRALMHHPDRHSG---------ASAEVQKEE 424
Query: 205 DKYMADMDELFSQVDEKRKK 224
+K ++ E F+ + + +KK
Sbjct: 425 EKKFKEVGEAFTILSDPKKK 444
>gi|225735593 RNA polymerase II associated protein 3 isoform 2 [Homo
sapiens]
Length = 631
Score = 59.3 bits (142), Expect = 4e-09
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 23 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALAD 82
S A LKE+GN+ F KY EA CY + + +P V TNRA Y ++++ A +D
Sbjct: 130 SQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESD 189
Query: 83 CRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 123
C A+ L+ KA+ G + ++ +EA + +R L
Sbjct: 190 CNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLEL 230
Score = 58.5 bits (140), Expect = 7e-09
Identities = 32/84 (38%), Positives = 46/84 (54%)
Query: 30 KEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALEL 89
K++GN F KY A CY R I + A+ NRA+ YLK+Q++E+A DC +A+ L
Sbjct: 286 KDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILL 345
Query: 90 DGQSVKAHFFLGQCQLEMESYDEA 113
DG KA G + + +EA
Sbjct: 346 DGSYSKAFARRGTARTFLGKLNEA 369
>gi|225735591 RNA polymerase II associated protein 3 isoform 1 [Homo
sapiens]
Length = 665
Score = 59.3 bits (142), Expect = 4e-09
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 23 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALAD 82
S A LKE+GN+ F KY EA CY + + +P V TNRA Y ++++ A +D
Sbjct: 130 SQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESD 189
Query: 83 CRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 123
C A+ L+ KA+ G + ++ +EA + +R L
Sbjct: 190 CNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLEL 230
Score = 58.5 bits (140), Expect = 7e-09
Identities = 32/84 (38%), Positives = 46/84 (54%)
Query: 30 KEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALEL 89
K++GN F KY A CY R I + A+ NRA+ YLK+Q++E+A DC +A+ L
Sbjct: 286 KDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILL 345
Query: 90 DGQSVKAHFFLGQCQLEMESYDEA 113
DG KA G + + +EA
Sbjct: 346 DGSYSKAFARRGTARTFLGKLNEA 369
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 59.3 bits (142), Expect = 4e-09
Identities = 70/299 (23%), Positives = 113/299 (37%), Gaps = 36/299 (12%)
Query: 26 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRR 85
A +L+ +GNRL+ R+ A Y A+ P + Y+NR+ Y ++ HE AL D
Sbjct: 243 ASQLRHEGNRLYRERQVEAALLKYNEAVKLAPNDHLLYSNRSQIYFTLESHENALHDAEI 302
Query: 86 ALELDGQSVKAHFFLGQCQLEMESYDEAIA----------------------NLQRAYSL 123
A +L KAHF Q + +EA+ NL+ +
Sbjct: 303 ACKLRPMGFKAHFRKAQALATLGKVEEALREFLYCVSLDGKNKRARCEAQRDNLELPHCS 362
Query: 124 AKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSY--LSRLIAAERERELEECQ 181
++E+ GD S+L K + + + QE E + S A+ + + +E +
Sbjct: 363 SQEEAAARGDG--SSLMDPAKVKGDGQQHHMKDQEEEEEKWDATSPKAASSKTGKCQEKK 420
Query: 182 RNHEGDEDDSHVRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMR 241
R H E + D L + D D C + L
Sbjct: 421 RKHCQIESQEETGMPNKASKQDPPTDQGDKPALSLPL----ASFDASDLECA-LCMRLFY 475
Query: 242 EPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQ----EQLIPNLAMKEVIDAFISE 296
EP TP G T+ K +E L P+ + L+Q + N+ M+E+I F+ E
Sbjct: 476 EPVTTPCGHTFCLKCLERCLDHNAKC-PLCKDGLSQCLASRKYSKNVIMEELIAKFLPE 533
>gi|225735595 RNA polymerase II associated protein 3 isoform 3 [Homo
sapiens]
Length = 506
Score = 58.5 bits (140), Expect = 7e-09
Identities = 32/84 (38%), Positives = 46/84 (54%)
Query: 30 KEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALEL 89
K++GN F KY A CY R I + A+ NRA+ YLK+Q++E+A DC +A+ L
Sbjct: 127 KDRGNGFFKEGKYERAIECYTRGIAADGANALLPANRAMAYLKIQKYEEAEKDCTQAILL 186
Query: 90 DGQSVKAHFFLGQCQLEMESYDEA 113
DG KA G + + +EA
Sbjct: 187 DGSYSKAFARRGTARTFLGKLNEA 210
Score = 35.0 bits (79), Expect = 0.082
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 56 NPLVAVYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIA 115
+P V TNRA Y ++++ A +DC A+ L+ KA+ G + ++ +EA
Sbjct: 4 DPYNPVLPTNRASAYFRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKK 63
Query: 116 NLQRAYSL 123
+ +R L
Sbjct: 64 DYERVLEL 71
>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
[Homo sapiens]
Length = 438
Score = 58.5 bits (140), Expect = 7e-09
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 30 KEQGNRLFVGRKYPEAAACYGRAITRNP----LVAVYYTNRALCYLKMQQHEQALADCRR 85
KE GN+ F Y A Y A+ +P A Y NR K+++ + A+ DC
Sbjct: 204 KEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTN 263
Query: 86 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK-EQRLNFGDDIPSALRIAKK 144
A++LD +KA+ QC ++ E Y+EA+ + ++ Y K ++ + L+ +K+
Sbjct: 264 AVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLELKKSKR 323
Query: 145 KRWNSIEERRIHQESELHSYLSRLIAAERERELEECQRNHEGDEDDSHVRAQQACIEAKH 204
K + I + ++ + A R+R L H G A ++ +
Sbjct: 324 KDYYKI------LGVDKNASEDEIKKAYRKRALMHHPDRHSG---------ASAEVQKEE 368
Query: 205 DKYMADMDELFSQVDEKRKK 224
+K ++ E F+ + + +KK
Sbjct: 369 EKKFKEVGEAFTILSDPKKK 388
Score = 42.7 bits (99), Expect = 4e-04
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 57 PLVAVYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIAN 116
P A YY NRA + + + +AL D ++++ LD V+ H G+C L + + A +
Sbjct: 3 PKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRS 62
Query: 117 LQRAYSL 123
QRA L
Sbjct: 63 FQRALEL 69
>gi|75750484 cardiomyopathy associated 4 isoform 2 [Homo sapiens]
Length = 929
Score = 58.2 bits (139), Expect = 9e-09
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 26 AQELKEQGNRLFVGRKYPEAAACYGRAITRNP---LVAVYYTNRALCYLKMQQHEQALAD 82
A +LKE+GNR F + Y A Y +A+ L+A Y NRA C LK + + QA +D
Sbjct: 6 AVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASD 65
Query: 83 CRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 123
RA++++ +KA + Q + D+A ++QR +L
Sbjct: 66 ASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATL 106
>gi|27477061 cardiomyopathy associated 4 isoform 1 [Homo sapiens]
Length = 931
Score = 58.2 bits (139), Expect = 9e-09
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 26 AQELKEQGNRLFVGRKYPEAAACYGRAITRNP---LVAVYYTNRALCYLKMQQHEQALAD 82
A +LKE+GNR F + Y A Y +A+ L+A Y NRA C LK + + QA +D
Sbjct: 6 AVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASD 65
Query: 83 CRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 123
RA++++ +KA + Q + D+A ++QR +L
Sbjct: 66 ASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATL 106
>gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Homo
sapiens]
Length = 420
Score = 57.4 bits (137), Expect = 2e-08
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 21 EKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQAL 80
EK+P + LK++GN+LF Y A Y AI N + + Y NRA C+LK++ +A+
Sbjct: 287 EKNP--EWLKDKGNKLFATENYLAAINAYNLAIRLNNKMPLLYLNRAACHLKLKNLHKAI 344
Query: 81 ADCRRALEL--------DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRL 129
D +ALEL +KAH G ++E Y E + + + A + ++
Sbjct: 345 EDSSKALELLMPPVTDNANARMKAHVRRGTAFCQLELYVEGLQDYEAALKIDPSNKI 401
>gi|19923193 heat shock 70kD protein binding protein [Homo sapiens]
Length = 369
Score = 57.0 bits (136), Expect = 2e-08
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 21 EKSPSAQELKEQGNRLFVGR-------KYPEAAACYGRAITRNPLVAVYYTNRALCYLKM 73
E + +E+ +Q N V + +A + AI NP +A+ Y RA ++K+
Sbjct: 102 ENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKL 161
Query: 74 QQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGD 133
Q+ A+ DC RA+E++ S + + + G+ + ++EA A+ LA +L++ +
Sbjct: 162 QKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEA------AHDLALACKLDYDE 215
Query: 134 DIPSALRIAKKKRWNSIEERRIH----QESELHSYLSRLIAAERERELEECQRNHE 185
D + L+ + + E RR + +E E+ + R+ A E E QR E
Sbjct: 216 DASAMLKEVQPRAQKIAEHRRKYERKREEREIKERIERVKKAREEH--ERAQREEE 269
>gi|224809329 FK506 binding protein 5 isoform 1 [Homo sapiens]
Length = 457
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 25/154 (16%)
Query: 21 EKSPSAQELKEQGNRLFVGRKYPEAAACYGRAIT---------------RNPLVAVYYTN 65
EK A +KE+G F G KY +A YG+ ++ + + N
Sbjct: 263 EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLN 322
Query: 66 RALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 125
A+CYLK++++ +A+ C +AL LD + K + G+ QL M ++ A + ++ +
Sbjct: 323 LAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNP 382
Query: 126 EQRLNFGDDIPSALRIA---KKKRWNSIEERRIH 156
+ + + L+I+ KK + ++ +RRI+
Sbjct: 383 QNK-------AARLQISMCQKKAKEHNERDRRIY 409
>gi|224809327 FK506 binding protein 5 isoform 1 [Homo sapiens]
Length = 457
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 25/154 (16%)
Query: 21 EKSPSAQELKEQGNRLFVGRKYPEAAACYGRAIT---------------RNPLVAVYYTN 65
EK A +KE+G F G KY +A YG+ ++ + + N
Sbjct: 263 EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLN 322
Query: 66 RALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 125
A+CYLK++++ +A+ C +AL LD + K + G+ QL M ++ A + ++ +
Sbjct: 323 LAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNP 382
Query: 126 EQRLNFGDDIPSALRIA---KKKRWNSIEERRIH 156
+ + + L+I+ KK + ++ +RRI+
Sbjct: 383 QNK-------AARLQISMCQKKAKEHNERDRRIY 409
>gi|4758384 FK506 binding protein 5 isoform 1 [Homo sapiens]
Length = 457
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 25/154 (16%)
Query: 21 EKSPSAQELKEQGNRLFVGRKYPEAAACYGRAIT---------------RNPLVAVYYTN 65
EK A +KE+G F G KY +A YG+ ++ + + N
Sbjct: 263 EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLN 322
Query: 66 RALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 125
A+CYLK++++ +A+ C +AL LD + K + G+ QL M ++ A + ++ +
Sbjct: 323 LAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNP 382
Query: 126 EQRLNFGDDIPSALRIA---KKKRWNSIEERRIH 156
+ + + L+I+ KK + ++ +RRI+
Sbjct: 383 QNK-------AARLQISMCQKKAKEHNERDRRIY 409
>gi|4503729 FK506 binding protein 52 [Homo sapiens]
Length = 459
Score = 53.1 bits (126), Expect = 3e-07
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 31/206 (15%)
Query: 19 SPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAIT---------------RNPLVAVYY 63
S EK + +KE+G F KY +A Y + ++ L +
Sbjct: 263 SEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASH 322
Query: 64 TNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 123
N A+C+LK+Q A+ C +ALELD + K F G+ L + ++ A A+ Q+ L
Sbjct: 323 LNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQL 382
Query: 124 AKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYL-SRLIAAERERELEECQR 182
+ + L + +++ R++ +E +L++ + RL E + + E
Sbjct: 383 YPNNKA-----AKTQLAVCQQR-----IRRQLAREKKLYANMFERLAEEENKAKAEASSG 432
Query: 183 NHEGD-----EDDSHVRAQQACIEAK 203
+H D E S+ Q+ +E +
Sbjct: 433 DHPTDTEMKEEQKSNTAGSQSQVETE 458
>gi|37622896 LON peptidase N-terminal domain and ring finger 3
isoform 2 [Homo sapiens]
Length = 718
Score = 52.0 bits (123), Expect = 6e-07
Identities = 67/277 (24%), Positives = 104/277 (37%), Gaps = 33/277 (11%)
Query: 26 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRR 85
A +L+ +GNRL+ R+ A Y A+ P + Y+NR+ Y ++ HE AL D
Sbjct: 243 ASQLRHEGNRLYRERQVEAALLKYNEAVKLAPNDHLLYSNRSQIYFTLESHENALHDAEI 302
Query: 86 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKK 145
A +L K + L C S +EA A GD S+L K
Sbjct: 303 ACKLRPMGFKDNLELPHC----SSQEEAAAR---------------GDG--SSLMDPAKV 341
Query: 146 RWNSIEERRIHQESELHSY--LSRLIAAERERELEECQRNHEGDEDDSHVRAQQACIEAK 203
+ + + QE E + S A+ + + +E +R H E +
Sbjct: 342 KGDGQQHHMKDQEEEEEKWDATSPKAASSKTGKCQEKKRKHCQIESQEETGMPNKASKQD 401
Query: 204 HDKYMADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQR 263
D L + D D C + L EP TP G T+ K +E L
Sbjct: 402 PPTDQGDKPALSLPL----ASFDASDLECA-LCMRLFYEPVTTPCGHTFCLKCLERCLDH 456
Query: 264 VGHFDPVTRSPLTQ----EQLIPNLAMKEVIDAFISE 296
P+ + L+Q + N+ M+E+I F+ E
Sbjct: 457 NAKC-PLCKDGLSQCLASRKYSKNVIMEELIAKFLPE 492
>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 50.8 bits (120), Expect = 1e-06
Identities = 35/116 (30%), Positives = 51/116 (43%)
Query: 29 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALE 88
+K +GN F ++ A Y RAI P + Y NRALC+L+ Q AL D +RA
Sbjct: 234 MKMKGNEEFSKERFDIAIIYYTRAIEYRPENYLLYGNRALCFLRTGQFRNALGDGKRATI 293
Query: 89 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 144
L K H+ + YD A+ +A L K D I +++ K+
Sbjct: 294 LKNTWPKGHYRYCDALSMLGEYDWALQANIKAQKLCKNDPEGIKDLIQQHVKLQKQ 349
>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 50.8 bits (120), Expect = 1e-06
Identities = 35/116 (30%), Positives = 51/116 (43%)
Query: 29 LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQHEQALADCRRALE 88
+K +GN F ++ A Y RAI P + Y NRALC+L+ Q AL D +RA
Sbjct: 234 MKMKGNEEFSKERFDIAIIYYTRAIEYRPENYLLYGNRALCFLRTGQFRNALGDGKRATI 293
Query: 89 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 144
L K H+ + YD A+ +A L K D I +++ K+
Sbjct: 294 LKNTWPKGHYRYCDALSMLGEYDWALQANIKAQKLCKNDPEGIKDLIQQHVKLQKQ 349
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,138,928
Number of Sequences: 37866
Number of extensions: 569936
Number of successful extensions: 2756
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 2437
Number of HSP's gapped (non-prelim): 401
length of query: 303
length of database: 18,247,518
effective HSP length: 102
effective length of query: 201
effective length of database: 14,385,186
effective search space: 2891422386
effective search space used: 2891422386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.