RPAP3 15220

Name: RPAP3	Sequence: fasta or formatted (506aa)		NCBI GI: 225735595
Description: RNA polymerase II associated protein 3 isoform 3		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [665aa] RNA polymerase II associated protein 3 isoform 1 alt prot [631aa] RNA polymerase II associated protein 3 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 47 3 C cysteine 0.8 4 1 D aspartate 5.7 29 2 E glutamate 8.7 44 2 F phenylalanine 4.2 21 2 G glycine 3.6 18 2 H histidine 0.8 4 1 I isoleucine 5.9 30 2 K lysine 10.1 51 2 L leucine 9.3 47 3 M methionine 1.4 7 1 N asparagine 5.1 26 2 P proline 5.5 28 2 Q glutamine 5.5 28 2 R arginine 4.5 23 2 S serine 6.9 35 2 T threonine 4.9 25 2 V valine 4.2 21 2 W tryptophan 0.2 1 1 Y tyrosine 3.4 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA polymerase II associated protein 3 isoform 3 [H... RPAP3 1.000 RNA polymerase II associated protein 3 isoform 1 [H... RPAP3 0.907 RNA polymerase II associated protein 3 isoform 2 [H... TOMM34 0.081 translocase of outer mitochondrial membrane 34 [Homo... SPAG1 0.076 sperm associated antigen 1 SPAG1 0.076 sperm associated antigen 1 SGTB 0.066 small glutamine-rich tetratricopeptide repeat (TPR)-... STIP1 0.059 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... PPP5C 0.059 protein phosphatase 5, catalytic subunit FKBP4 0.054 FK506 binding protein 52 SGTA 0.053 small glutamine-rich tetratricopeptide FKBP5 0.053 FK506 binding protein 5 isoform 1 FKBP5 0.053 FK506 binding protein 5 isoform 1 FKBP5 0.053 FK506 binding protein 5 isoform 1 TOMM70A 0.052 translocase of outer mitochondrial membrane 70 homol... DNAJC7 0.048 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... UNC45A 0.048 smooth muscle cell associated protein-1 isoform 3 [H... UNC45A 0.048 smooth muscle cell associated protein-1 isoform 2 [H... DNAJC7 0.046 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... TTC1 0.046 tetratricopeptide repeat domain 1 TTC12 0.044 tetratricopeptide repeat domain 12 TTC28 0.043 tetratricopeptide repeat domain 28 FKBPL 0.038 WAF-1/CIP1 stabilizing protein 39 UNC45B 0.037 cardiomyopathy associated 4 isoform 2 UNC45B 0.037 cardiomyopathy associated 4 isoform 1 DYX1C1 0.035 dyslexia susceptibility 1 candidate 1 isoform a [Hom... STUB1 0.035 STIP1 homology and U-box containing protein 1 ST13 0.030 heat shock 70kD protein binding protein DNAJC3 0.030 DnaJ (Hsp40) homolog, subfamily C, member 3 TTC6 0.028 PREDICTED: tetratricopeptide repeat domain 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.