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Search of human proteins with 56119214
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56119214 GTPase, IMAP family member 6 [Homo sapiens]
(292 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56119214 GTPase, IMAP family member 6 [Homo sapiens] 581 e-166
gi|18594498 GTPase, IMAP family member 1 [Homo sapiens] 202 3e-52
gi|28416431 GTPase, IMAP family member 2 [Homo sapiens] 201 8e-52
gi|28416949 GTPase, IMAP family member 5 [Homo sapiens] 189 2e-48
gi|23397516 GTPase, IMAP family member 7 [Homo sapiens] 176 3e-44
gi|8922873 GTPase, IMAP family member 4 [Homo sapiens] 175 5e-44
gi|28416956 GTPase, IMAP family member 8 [Homo sapiens] 158 6e-39
gi|24307899 Era-like 1 [Homo sapiens] 40 0.002
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 37 0.021
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 37 0.021
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 37 0.021
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 37 0.021
gi|239753874 PREDICTED: similar to hCG2036814 [Homo sapiens] 35 0.078
gi|239748437 PREDICTED: similar to hCG2036814 [Homo sapiens] 35 0.078
gi|239742371 PREDICTED: hypothetical protein XP_002342504 [Homo ... 35 0.078
gi|205360934 fibronectin type III domain containing 3B [Homo sap... 33 0.23
gi|205360932 fibronectin type III domain containing 3B [Homo sap... 33 0.23
gi|5730009 ret finger protein [Homo sapiens] 33 0.30
gi|5031937 calcium binding and coiled-coil domain 2 [Homo sapiens] 33 0.39
gi|164698504 septin 9 isoform f [Homo sapiens] 32 0.51
gi|164698502 septin 9 isoform d [Homo sapiens] 32 0.51
gi|164698500 septin 9 isoform e [Homo sapiens] 32 0.51
gi|164698498 septin 9 isoform b [Homo sapiens] 32 0.51
gi|164698496 septin 9 isoform e [Homo sapiens] 32 0.51
gi|164698494 septin 9 isoform a [Homo sapiens] 32 0.51
gi|116256489 septin 9 isoform c [Homo sapiens] 32 0.51
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 32 0.86
gi|31742498 unc-84 homolog B [Homo sapiens] 32 0.86
gi|45827771 autoantigen RCD8 [Homo sapiens] 32 0.86
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 31 1.1
>gi|56119214 GTPase, IMAP family member 6 [Homo sapiens]
Length = 292
Score = 581 bits (1497), Expect = e-166
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MEEEEYEQIPQENPPEELSQDPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSI 60
MEEEEYEQIPQENPPEELSQDPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSI
Sbjct: 1 MEEEEYEQIPQENPPEELSQDPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSI 60
Query: 61 LGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPNILSPQVSPEVADAICQAIVLSA 120
LGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPNILSPQVSPEVADAICQAIVLSA
Sbjct: 61 LGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPNILSPQVSPEVADAICQAIVLSA 120
Query: 121 PGPHAVLLVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRET 180
PGPHAVLLVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRET
Sbjct: 121 PGPHAVLLVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRET 180
Query: 181 NNQALAWLDVTLARRHCGFNNRAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQ 240
NNQALAWLDVTLARRHCGFNNRAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQ
Sbjct: 181 NNQALAWLDVTLARRHCGFNNRAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQ 240
Query: 241 QNFRLKELQERQVSQGQGSEDVPGEESWLEGLSQIQKESEEAHRCLLGKADL 292
QNFRLKELQERQVSQGQGSEDVPGEESWLEGLSQIQKESEEAHRCLLGKADL
Sbjct: 241 QNFRLKELQERQVSQGQGSEDVPGEESWLEGLSQIQKESEEAHRCLLGKADL 292
>gi|18594498 GTPase, IMAP family member 1 [Homo sapiens]
Length = 306
Score = 202 bits (514), Expect = 3e-52
Identities = 117/240 (48%), Positives = 153/240 (63%), Gaps = 13/240 (5%)
Query: 29 GLREKEQKTPRRLR-LILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWA 87
GL E Q R LIL+G+TG+GKSATGNSILG+ F S+L VT+ SR W
Sbjct: 15 GLEENAQSRQESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTGSRRWD 74
Query: 88 GKELEVIDTPNILSPQVSPEVADAICQ----AIVLSAPGPHAVLLVTQLGRFTDEDQQVV 143
+EV+DTP+I S QVS D C+ +LSAPGPHA+LLVTQLGRFT +DQQ V
Sbjct: 75 KCHVEVVDTPDIFSSQVSK--TDPGCEERGHCYLLSAPGPHALLLVTQLGRFTAQDQQAV 132
Query: 144 RRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRA 203
R+++++FG VL ++VFTRKEDLAGGSL DYV T N+AL L R C F+NRA
Sbjct: 133 RQVRDMFGEDVLKWMVIVFTRKEDLAGGSLHDYVSNTENRALRELVAECGGRVCAFDNRA 192
Query: 204 QGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQ------QNFRLKELQERQVSQGQ 257
G EQEAQ+ +L+ VE ++ E++G +YSN+ Y+ Q RL+ + ER ++ Q
Sbjct: 193 TGREQEAQVEQLLGMVEGLVLEHKGAHYSNEVYELAQVLRWAGPEERLRRVAERVAARVQ 252
>gi|28416431 GTPase, IMAP family member 2 [Homo sapiens]
Length = 337
Score = 201 bits (510), Expect = 8e-52
Identities = 97/203 (47%), Positives = 142/203 (69%), Gaps = 1/203 (0%)
Query: 41 LRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPNIL 100
LR+IL+GKTG+GKSA GNSIL + FESKL ++ +TKT + W +E+ +IDTP++
Sbjct: 23 LRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIVIIDTPDMF 82
Query: 101 SPQVSPEVA-DAICQAIVLSAPGPHAVLLVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTI 159
S + E + + +LSAPGPH +LLVTQLGR+T +DQQ +R++E+FG +GHTI
Sbjct: 83 SWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGHTI 142
Query: 160 LVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEAQLRELMEKV 219
++FT KEDL GGSL DY+ +++N+AL+ L R C FNNRA+G Q+ Q++ELM+ +
Sbjct: 143 VLFTHKEDLNGGSLMDYMHDSDNKALSKLVAACGGRICAFNNRAEGSNQDDQVKELMDCI 202
Query: 220 EAIMWENEGDYYSNKAYQYTQQN 242
E ++ E GD+Y+N Y Q++
Sbjct: 203 EDLLMEKNGDHYTNGLYSLIQRS 225
>gi|28416949 GTPase, IMAP family member 5 [Homo sapiens]
Length = 307
Score = 189 bits (481), Expect = 2e-48
Identities = 98/201 (48%), Positives = 134/201 (66%), Gaps = 1/201 (0%)
Query: 37 TPRRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDT 96
TP LR+IL+GKTG GKSATGNSILG+ VFESKL + VT+T Q ++ W G+++ V+DT
Sbjct: 24 TPPALRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQVKTGTWNGRKVLVVDT 83
Query: 97 PNILSPQV-SPEVADAICQAIVLSAPGPHAVLLVTQLGRFTDEDQQVVRRLQEVFGVGVL 155
P+I Q + E+ I +LSAPGPH +LLV QLGRFT +D +R+++EVFG G +
Sbjct: 84 PSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQLGRFTAQDTVAIRKVKEVFGTGAM 143
Query: 156 GHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEAQLREL 215
H +++FT KEDL G +L+DYV T+N +L L RR+C FNN EEQ Q EL
Sbjct: 144 RHVVILFTHKEDLGGQALDDYVANTDNCSLKDLVRECERRYCAFNNWGSVEEQRQQQAEL 203
Query: 216 MEKVEAIMWENEGDYYSNKAY 236
+ +E + E EG ++SN +
Sbjct: 204 LAVIERLGREREGSFHSNDLF 224
>gi|23397516 GTPase, IMAP family member 7 [Homo sapiens]
Length = 300
Score = 176 bits (445), Expect = 3e-44
Identities = 95/256 (37%), Positives = 160/256 (62%), Gaps = 7/256 (2%)
Query: 39 RRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPN 98
R LR++L+GKTGSGKSAT N+ILG ++F+S+++ + VTK Q+ SREW G++L V+DTP
Sbjct: 7 RSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPG 66
Query: 99 ILSPQVSPE-VADAICQAIVLSAPGPHAVLLVTQLGRFTDEDQQVVRRLQEVFGVGVLGH 157
+ + S + I + I+ S PGPHA++LV LGR+T+E+Q+ V ++ VFG + H
Sbjct: 67 LFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKH 126
Query: 158 TILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNN--RAQGEEQEAQLREL 215
+++FTRKE+L G S D++ + + L + R C F+N + E+E+Q++EL
Sbjct: 127 MVILFTRKEELEGQSFHDFIADA-DVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQEL 185
Query: 216 MEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQGSEDVPGEESWLEGLSQI 275
+E +E ++ NEG Y+S+ Y+ T++ + +E R++ Q +E++ E E +
Sbjct: 186 VELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVE---EDKHKS 242
Query: 276 QKESEEAHRCLLGKAD 291
++E E+ + L K D
Sbjct: 243 EEEKEKEIKLLKLKYD 258
>gi|8922873 GTPase, IMAP family member 4 [Homo sapiens]
Length = 329
Score = 175 bits (443), Expect = 5e-44
Identities = 89/221 (40%), Positives = 140/221 (63%), Gaps = 3/221 (1%)
Query: 33 KEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELE 92
+++ +LR++L+GKTG+GKSATGNSILGR VF S + + +TK ++RS W EL
Sbjct: 23 RQEPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV 82
Query: 93 VIDTPNILSPQV-SPEVADAICQAIVLSAPGPHAVLLVTQLGRFTDEDQQVVRRLQEVFG 151
V+DTP I +V + E + I + I+L++PGPHA+LLV LGR+T+E+ + ++ ++FG
Sbjct: 83 VVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPLGRYTEEEHKATEKILKMFG 142
Query: 152 VGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEAQ 211
IL+FTRK+DL +L DY+RE +D+ R+C NN+A G EQEAQ
Sbjct: 143 ERARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLMDI-FGDRYCALNNKATGAEQEAQ 201
Query: 212 LRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQ 252
+L+ ++ ++ EN+ Y+N+ YQ ++ + K+ Q Q
Sbjct: 202 RAQLLGLIQRVVRENKEGCYTNRMYQRAEEEIQ-KQTQAMQ 241
>gi|28416956 GTPase, IMAP family member 8 [Homo sapiens]
Length = 665
Score = 158 bits (399), Expect = 6e-39
Identities = 91/226 (40%), Positives = 138/226 (61%), Gaps = 16/226 (7%)
Query: 31 REKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKE 90
REKE L ++L+G++G+GKSATGNSILG VF S+L +PVTKTSQ R W G+E
Sbjct: 434 REKET-----LNIVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTWDGQE 488
Query: 91 LEVIDTPN---ILSPQVSPE-VADAICQAIVLSAPGPHAVLLVTQLGRFTDEDQQVVRRL 146
+ V+DTP+ +L + P + + + + + G +LV QLGRFT+ED+ V +L
Sbjct: 489 VVVVDTPSFNQMLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQLGRFTEEDKTAVAKL 548
Query: 147 QEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGE 206
+ +FG + I++FTRKEDL G+LED+++ ++N+AL + RR C FNN+ G+
Sbjct: 549 EAIFGADFTKYAIMLFTRKEDLGAGNLEDFMKNSDNKALRRIFKKCGRRVCAFNNKETGQ 608
Query: 207 EQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFR--LKELQE 250
QE Q++ L+ KV + E+ Y +TQ+N +K +QE
Sbjct: 609 AQETQVKALLTKVNDLRKES-----GWSGYPHTQENVSKLIKNVQE 649
Score = 142 bits (359), Expect = 3e-34
Identities = 87/223 (39%), Positives = 130/223 (58%), Gaps = 4/223 (1%)
Query: 41 LRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPNIL 100
LRL+L+GK SGKSATGN+ILG+ VF+SK S + V K QR S +++ VIDTP++
Sbjct: 11 LRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVVVIDTPDLF 70
Query: 101 SPQVSPEVADAICQ-AIVLSAPGPHAVLLVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTI 159
S E Q + LSAP HA+LLV +G FT ED++ + +Q+VFG H I
Sbjct: 71 SSIACAEDKQRNIQHCLELSAPSLHALLLVIAIGHFTREDEETAKGIQQVFGAEARRHII 130
Query: 160 LVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQG-EEQEAQLRELMEK 218
+VFTRK+DL L+D++ + N+ L L R+C FNN+ +EQ Q+ EL+ K
Sbjct: 131 IVFTRKDDLGDDLLQDFIEK--NKPLKQLVQDYEGRYCIFNNKTNSKDEQITQVLELLRK 188
Query: 219 VEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQGSED 261
VE+++ N G Y+ N + ++ + E ++ + QG +
Sbjct: 189 VESLVNTNGGPYHVNFKTEGSRFQDCVNEAASQEGDKPQGPRE 231
Score = 134 bits (338), Expect = 7e-32
Identities = 77/187 (41%), Positives = 112/187 (59%), Gaps = 9/187 (4%)
Query: 41 LRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPNIL 100
L ++L+GK G+GKSA GNSILGR F++ S + VT++ SR W K++ +ID P+I
Sbjct: 248 LTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESRSWRKKKVSIIDAPDIS 307
Query: 101 S-PQVSPEVADAICQAIVLSAPGPHAVLLVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTI 159
S + EV IC GPHA LLVT LG +T D+ V+ +Q FG + I
Sbjct: 308 SLKNIDSEVRKHIC-------TGPHAFLLVTPLGFYTKNDEAVLSTIQNNFGEKFFEYMI 360
Query: 160 LVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEAQLRELMEKV 219
++ TRKEDL L+ ++R +N+AL L R+ FN RA GEE++ Q EL+EK+
Sbjct: 361 ILLTRKEDLGDQDLDTFLR-NSNKALYGLIQKCKNRYSAFNYRATGEEEQRQADELLEKI 419
Query: 220 EAIMWEN 226
E+++ +N
Sbjct: 420 ESMVHQN 426
>gi|24307899 Era-like 1 [Homo sapiens]
Length = 437
Score = 40.0 bits (92), Expect = 0.002
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 39 RRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELEVI--DT 96
R LR++L+G +GKS N +LGR VF +R V T + KE +VI DT
Sbjct: 112 RVLRVVLLGAPNAGKSTLSNQLLGRKVFP---VSRKVHTTRCQALGVITEKETQVILLDT 168
Query: 97 PNILSP 102
P I+SP
Sbjct: 169 PGIISP 174
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 37.0 bits (84), Expect = 0.021
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 29/162 (17%)
Query: 138 EDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHC 197
+ ++ +RRL+E R+E+ E+ +R+ +A W +
Sbjct: 809 QQEEALRRLEE--------------RRREEEERRKQEELLRKQEEEAAKWAREEEEAQRR 854
Query: 198 GFNNRAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQ 257
NR + EE+ A+LR E+ E E E Q QQ L+ LQ++Q Q
Sbjct: 855 LEENRLRMEEEAARLRH--EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQL 912
Query: 258 GSEDVPGEESWLE-------------GLSQIQKESEEAHRCL 286
+P +W + L++IQK EE R L
Sbjct: 913 AQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERERQL 954
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 37.0 bits (84), Expect = 0.021
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 29/162 (17%)
Query: 138 EDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHC 197
+ ++ +RRL+E R+E+ E+ +R+ +A W +
Sbjct: 836 QQEEALRRLEE--------------RRREEEERRKQEELLRKQEEEAAKWAREEEEAQRR 881
Query: 198 GFNNRAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQ 257
NR + EE+ A+LR E+ E E E Q QQ L+ LQ++Q Q
Sbjct: 882 LEENRLRMEEEAARLRH--EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQL 939
Query: 258 GSEDVPGEESWLE-------------GLSQIQKESEEAHRCL 286
+P +W + L++IQK EE R L
Sbjct: 940 AQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERERQL 981
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 37.0 bits (84), Expect = 0.021
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 29/162 (17%)
Query: 138 EDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHC 197
+ ++ +RRL+E R+E+ E+ +R+ +A W +
Sbjct: 815 QQEEALRRLEE--------------RRREEEERRKQEELLRKQEEEAAKWAREEEEAQRR 860
Query: 198 GFNNRAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQ 257
NR + EE+ A+LR E+ E E E Q QQ L+ LQ++Q Q
Sbjct: 861 LEENRLRMEEEAARLRH--EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQL 918
Query: 258 GSEDVPGEESWLE-------------GLSQIQKESEEAHRCL 286
+P +W + L++IQK EE R L
Sbjct: 919 AQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERERQL 960
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 37.0 bits (84), Expect = 0.021
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 29/162 (17%)
Query: 138 EDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHC 197
+ ++ +RRL+E R+E+ E+ +R+ +A W +
Sbjct: 815 QQEEALRRLEE--------------RRREEEERRKQEELLRKQEEEAAKWAREEEEAQRR 860
Query: 198 GFNNRAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQ 257
NR + EE+ A+LR E+ E E E Q QQ L+ LQ++Q Q
Sbjct: 861 LEENRLRMEEEAARLRH--EEEERKRKELEVQRQKELMRQRQQQQEALRRLQQQQQQQQL 918
Query: 258 GSEDVPGEESWLE-------------GLSQIQKESEEAHRCL 286
+P +W + L++IQK EE R L
Sbjct: 919 AQMKLPSSSTWGQQSNTTACQSQATLSLAEIQKLEEERERQL 960
>gi|239753874 PREDICTED: similar to hCG2036814 [Homo sapiens]
Length = 547
Score = 35.0 bits (79), Expect = 0.078
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 18/105 (17%)
Query: 41 LRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVT-----------KTSQRRSREWAGK 89
+ L L G T SGKS+ GN +LG F S + VT + RR
Sbjct: 284 INLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVAL 343
Query: 90 ELEVIDTP-----NILSPQVSPEVADAICQAIVLSAPGPHAVLLV 129
+++V+DTP + V EV +A+ A G H LLV
Sbjct: 344 QVQVLDTPGYPHSRLSKKYVKQEVKEAL--AHHFGQGGLHLALLV 386
>gi|239748437 PREDICTED: similar to hCG2036814 [Homo sapiens]
Length = 547
Score = 35.0 bits (79), Expect = 0.078
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 18/105 (17%)
Query: 41 LRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVT-----------KTSQRRSREWAGK 89
+ L L G T SGKS+ GN +LG F S + VT + RR
Sbjct: 284 INLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVAL 343
Query: 90 ELEVIDTP-----NILSPQVSPEVADAICQAIVLSAPGPHAVLLV 129
+++V+DTP + V EV +A+ A G H LLV
Sbjct: 344 QVQVLDTPGYPHSRLSKKYVKQEVKEAL--AHHFGQGGLHLALLV 386
>gi|239742371 PREDICTED: hypothetical protein XP_002342504 [Homo
sapiens]
Length = 547
Score = 35.0 bits (79), Expect = 0.078
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 18/105 (17%)
Query: 41 LRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVT-----------KTSQRRSREWAGK 89
+ L L G T SGKS+ GN +LG F S + VT + RR
Sbjct: 284 INLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVAL 343
Query: 90 ELEVIDTP-----NILSPQVSPEVADAICQAIVLSAPGPHAVLLV 129
+++V+DTP + V EV +A+ A G H LLV
Sbjct: 344 QVQVLDTPGYPHSRLSKKYVKQEVKEAL--AHHFGQGGLHLALLV 386
>gi|205360934 fibronectin type III domain containing 3B [Homo
sapiens]
Length = 1204
Score = 33.5 bits (75), Expect = 0.23
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 47 GKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPNILSPQVSP 106
GK SG S G S G + +++ R K++ +E+ ELEV +ILS P
Sbjct: 226 GKGHSGGSGGGGSGSGPGIKKTERRARSSPKSNDSDLQEY---ELEVKRVQDILSGIEKP 282
Query: 107 EVADAICQAIVLS-AP------GPHAVL 127
+V++ +A+VLS AP GPH+ L
Sbjct: 283 QVSNIQARAVVLSWAPPVGLSCGPHSGL 310
>gi|205360932 fibronectin type III domain containing 3B [Homo
sapiens]
Length = 1204
Score = 33.5 bits (75), Expect = 0.23
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 47 GKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPNILSPQVSP 106
GK SG S G S G + +++ R K++ +E+ ELEV +ILS P
Sbjct: 226 GKGHSGGSGGGGSGSGPGIKKTERRARSSPKSNDSDLQEY---ELEVKRVQDILSGIEKP 282
Query: 107 EVADAICQAIVLS-AP------GPHAVL 127
+V++ +A+VLS AP GPH+ L
Sbjct: 283 QVSNIQARAVVLSWAPPVGLSCGPHSGL 310
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 33.1 bits (74), Expect = 0.30
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 173 LEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEAQLRELME-KVEAIMWENEGDYY 231
LE+ V Q LD + RAQGE+ A+L L + + E I+WE E Y+
Sbjct: 132 LEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMEREKIVWEFEQLYH 191
Query: 232 SNKAYQYTQQNFRLKEL 248
S K ++Y + RL+EL
Sbjct: 192 SLKEHEY-RLLARLEEL 207
>gi|5031937 calcium binding and coiled-coil domain 2 [Homo sapiens]
Length = 446
Score = 32.7 bits (73), Expect = 0.39
Identities = 30/136 (22%), Positives = 64/136 (47%), Gaps = 16/136 (11%)
Query: 159 ILVFTRKEDLAGGSLEDYVRET--NNQALAWLDVTLARRHCGFNNRAQGEEQEAQLRELM 216
ILV T + ++ +E + +E NQ L ++L +++ Q +++E + + +
Sbjct: 133 ILVVTTQGEVE--EIEQHNKELCKENQELKDSCISLQKQNSDMQAELQKKQEELETLQSI 190
Query: 217 EKVEAIMWENEGDYYSNKAYQYTQQN-----------FRLKELQERQVSQGQGSED-VPG 264
K + + + DY+ + Q +QN R+ +LQ + +Q + E V G
Sbjct: 191 NKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQEKEMEKLVQG 250
Query: 265 EESWLEGLSQIQKESE 280
++ E L Q++KE++
Sbjct: 251 DQDKTEQLEQLKKEND 266
>gi|164698504 septin 9 isoform f [Homo sapiens]
Length = 335
Score = 32.3 bits (72), Expect = 0.51
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 21 DPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ 80
D +LE +R K K ++++G++G GKS N++ F+SK+S + V TS+
Sbjct: 31 DSILEQ---MRRKAMKQGFEFNIMVVGQSGLGKSTLINTL-----FKSKISRKSVQPTSE 82
Query: 81 RR--------------SREWAGKELEVIDTP 97
R + +L VIDTP
Sbjct: 83 ERIPKTIEIKSITHDIEEKGVRMKLTVIDTP 113
>gi|164698502 septin 9 isoform d [Homo sapiens]
Length = 474
Score = 32.3 bits (72), Expect = 0.51
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 21 DPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ 80
D +LE +R K K ++++G++G GKS N++ F+SK+S + V TS+
Sbjct: 170 DSILEQ---MRRKAMKQGFEFNIMVVGQSGLGKSTLINTL-----FKSKISRKSVQPTSE 221
Query: 81 RR--------------SREWAGKELEVIDTP 97
R + +L VIDTP
Sbjct: 222 ERIPKTIEIKSITHDIEEKGVRMKLTVIDTP 252
>gi|164698500 septin 9 isoform e [Homo sapiens]
Length = 422
Score = 32.3 bits (72), Expect = 0.51
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 21 DPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ 80
D +LE +R K K ++++G++G GKS N++ F+SK+S + V TS+
Sbjct: 118 DSILEQ---MRRKAMKQGFEFNIMVVGQSGLGKSTLINTL-----FKSKISRKSVQPTSE 169
Query: 81 RR--------------SREWAGKELEVIDTP 97
R + +L VIDTP
Sbjct: 170 ERIPKTIEIKSITHDIEEKGVRMKLTVIDTP 200
>gi|164698498 septin 9 isoform b [Homo sapiens]
Length = 579
Score = 32.3 bits (72), Expect = 0.51
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 21 DPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ 80
D +LE +R K K ++++G++G GKS N++ F+SK+S + V TS+
Sbjct: 275 DSILEQ---MRRKAMKQGFEFNIMVVGQSGLGKSTLINTL-----FKSKISRKSVQPTSE 326
Query: 81 RR--------------SREWAGKELEVIDTP 97
R + +L VIDTP
Sbjct: 327 ERIPKTIEIKSITHDIEEKGVRMKLTVIDTP 357
>gi|164698496 septin 9 isoform e [Homo sapiens]
Length = 422
Score = 32.3 bits (72), Expect = 0.51
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 21 DPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ 80
D +LE +R K K ++++G++G GKS N++ F+SK+S + V TS+
Sbjct: 118 DSILEQ---MRRKAMKQGFEFNIMVVGQSGLGKSTLINTL-----FKSKISRKSVQPTSE 169
Query: 81 RR--------------SREWAGKELEVIDTP 97
R + +L VIDTP
Sbjct: 170 ERIPKTIEIKSITHDIEEKGVRMKLTVIDTP 200
>gi|164698494 septin 9 isoform a [Homo sapiens]
Length = 586
Score = 32.3 bits (72), Expect = 0.51
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 21 DPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ 80
D +LE +R K K ++++G++G GKS N++ F+SK+S + V TS+
Sbjct: 282 DSILEQ---MRRKAMKQGFEFNIMVVGQSGLGKSTLINTL-----FKSKISRKSVQPTSE 333
Query: 81 RR--------------SREWAGKELEVIDTP 97
R + +L VIDTP
Sbjct: 334 ERIPKTIEIKSITHDIEEKGVRMKLTVIDTP 364
>gi|116256489 septin 9 isoform c [Homo sapiens]
Length = 568
Score = 32.3 bits (72), Expect = 0.51
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 21 DPVLELSGGLREKEQKTPRRLRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ 80
D +LE +R K K ++++G++G GKS N++ F+SK+S + V TS+
Sbjct: 264 DSILEQ---MRRKAMKQGFEFNIMVVGQSGLGKSTLINTL-----FKSKISRKSVQPTSE 315
Query: 81 RR--------------SREWAGKELEVIDTP 97
R + +L VIDTP
Sbjct: 316 ERIPKTIEIKSITHDIEEKGVRMKLTVIDTP 346
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 31.6 bits (70), Expect = 0.86
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 20/137 (14%)
Query: 164 RKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGE-------------EQEA 210
RK++ E+ +RE Q L + T G E EQE
Sbjct: 258 RKQEEQMREQEEQMREQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEE 317
Query: 211 QLRELME---KVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQGSEDVPGEES 267
Q+RE E K E MWE + + K + Q+ +++ E++ + E V +E
Sbjct: 318 QMREQEEQMGKQEEQMWEQKEQMWEQKEQMWKQE----EQMGEQEEQMQKQEEQVRKQEE 373
Query: 268 WLEGLSQIQKESEEAHR 284
+ + ++ EE R
Sbjct: 374 QMRKQEEQMRKQEEQMR 390
>gi|31742498 unc-84 homolog B [Homo sapiens]
Length = 717
Score = 31.6 bits (70), Expect = 0.86
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 179 ETNNQALAWLDVTLARRHCGFNNRAQGEEQEAQLRELMEKVEAIMWENEG 228
+ +Q AW+ LAR G Q EE +AQLREL K+ + E +G
Sbjct: 452 DVESQFPAWISQFLARGGGGRVGLLQREEMQAQLRELESKILTHVAEMQG 501
>gi|45827771 autoantigen RCD8 [Homo sapiens]
Length = 1401
Score = 31.6 bits (70), Expect = 0.86
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 19/120 (15%)
Query: 14 PPEELSQDPVLELSGGLREKE----QKTPRRLRLIL-------MGKTGSGKSATGNSILG 62
PPEEL+ P L+L G L Q +PR L L + G G+ T S L
Sbjct: 649 PPEELTLSPKLQLDGSLTMSSSGSLQASPRGLLPGLLPAPADKLTPKGPGQVPTATSALS 708
Query: 63 RDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPNILSPQVSPEVA-DAICQAIVLSAP 121
++ E + P S+ RS +VI + + Q PE+A +A+ + SAP
Sbjct: 709 LELQEVEPLGLPQASPSRTRSP-------DVISSASTALSQDIPEIASEALSRGFGSSAP 761
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 31.2 bits (69), Expect = 1.1
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 205 GEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQGSEDVPG 264
G+E++ +E M + E MWE E + + Q+ K+ QE++ E +
Sbjct: 528 GQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMRE 587
Query: 265 EESWLEGLSQIQKESE 280
EE E ++++E E
Sbjct: 588 EERMREREKKMREEEE 603
Score = 28.5 bits (62), Expect = 7.3
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 206 EEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQER--QVSQGQGSEDVP 263
EE+ + E M++ E MWE E + + + QQ RL E +E+ + + Q E +
Sbjct: 623 EEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQ--RLPEQKEKLWEHEKMQEQEKMQ 680
Query: 264 GEESWLEGLSQIQKESEEAHR 284
+E + +++K+++E +
Sbjct: 681 EQEEKIWEQEKMEKKTQEQEK 701
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,161,439
Number of Sequences: 37866
Number of extensions: 555089
Number of successful extensions: 1794
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 1739
Number of HSP's gapped (non-prelim): 94
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.