Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 5454154
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5454154 peptidylprolyl isomerase H [Homo sapiens]
(177 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5454154 peptidylprolyl isomerase H [Homo sapiens] 368 e-102
gi|4826932 peptidylprolyl isomerase D [Homo sapiens] 195 2e-50
gi|45439318 peptidylprolyl isomerase E isoform 3 [Homo sapiens] 195 2e-50
gi|5174637 peptidylprolyl isomerase E isoform 1 [Homo sapiens] 195 2e-50
gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens] 191 4e-49
gi|4758950 peptidylprolyl isomerase B precursor [Homo sapiens] 189 1e-48
gi|10863927 peptidylprolyl isomerase A [Homo sapiens] 187 4e-48
gi|4505991 peptidylprolyl isomerase C [Homo sapiens] 183 6e-47
gi|45439316 peptidylprolyl isomerase E isoform 2 [Homo sapiens] 183 8e-47
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 173 8e-44
gi|150418007 RAN binding protein 2 [Homo sapiens] 171 2e-43
gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G ... 166 1e-41
gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... 166 1e-41
gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B ... 165 2e-41
gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens] 165 2e-41
gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C ... 165 2e-41
gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E ... 164 4e-41
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 164 4e-41
gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens] 164 5e-41
gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... 164 5e-41
gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens] 164 5e-41
gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... 164 5e-41
gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A iso... 164 5e-41
gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens] 162 1e-40
gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens] 162 1e-40
gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens] 162 1e-40
gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens] 159 9e-40
gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens] 159 9e-40
gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens] 159 9e-40
gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... 158 2e-39
>gi|5454154 peptidylprolyl isomerase H [Homo sapiens]
Length = 177
Score = 368 bits (945), Expect = e-102
Identities = 177/177 (100%), Positives = 177/177 (100%)
Query: 1 MAVANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGY 60
MAVANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGY
Sbjct: 1 MAVANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGY 60
Query: 61 KGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTN 120
KGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTN
Sbjct: 61 KGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTN 120
Query: 121 GCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
GCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM
Sbjct: 121 GCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
>gi|4826932 peptidylprolyl isomerase D [Homo sapiens]
Length = 370
Score = 195 bits (496), Expect = 2e-50
Identities = 102/175 (58%), Positives = 121/175 (69%), Gaps = 4/175 (2%)
Query: 6 SSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEF---RKDGVPIGYKG 62
S+P NP VFFDV IGG+ VGR+ +ELFAD+VPKTAENFR CTGE G P+ +KG
Sbjct: 11 SNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKG 70
Query: 63 STFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGC 122
FHR+IK FMIQGGDF N +GTG SIY F DENF +H GLLSMAN+G +TNG
Sbjct: 71 CPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGS 130
Query: 123 QFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
QFFIT LDGKHVVFG++I G+ V R +ENV KP VI++CGE+
Sbjct: 131 QFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEV-KGEKPAKLCVIAECGEL 184
>gi|45439318 peptidylprolyl isomerase E isoform 3 [Homo sapiens]
Length = 235
Score = 195 bits (495), Expect = 2e-50
Identities = 97/174 (55%), Positives = 122/174 (70%), Gaps = 6/174 (3%)
Query: 3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKG 62
+A + NP V+ D+ IG + GR+++ L +DVVP TAENFR CT E G+KG
Sbjct: 66 IAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHE-----KGFGFKG 120
Query: 63 STFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGC 122
S+FHR+I FM QGGDF N +GTG SIY F DENF L+H+ PGLLSMANSGP+TNG
Sbjct: 121 SSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGS 180
Query: 123 QFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGE 176
QFF+TC K DWLDGKHVVFG++ +GL V+R+IE + KPK V+I+ CGE
Sbjct: 181 QFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKPKQKVIIADCGE 233
>gi|5174637 peptidylprolyl isomerase E isoform 1 [Homo sapiens]
Length = 301
Score = 195 bits (495), Expect = 2e-50
Identities = 97/174 (55%), Positives = 122/174 (70%), Gaps = 6/174 (3%)
Query: 3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKG 62
+A + NP V+ D+ IG + GR+++ L +DVVP TAENFR CT E G+KG
Sbjct: 132 IAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHE-----KGFGFKG 186
Query: 63 STFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGC 122
S+FHR+I FM QGGDF N +GTG SIY F DENF L+H+ PGLLSMANSGP+TNG
Sbjct: 187 SSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGS 246
Query: 123 QFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGE 176
QFF+TC K DWLDGKHVVFG++ +GL V+R+IE + KPK V+I+ CGE
Sbjct: 247 QFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKPKQKVIIADCGE 299
>gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]
Length = 207
Score = 191 bits (484), Expect = 4e-49
Identities = 97/174 (55%), Positives = 121/174 (69%), Gaps = 6/174 (3%)
Query: 4 ANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGS 63
++SS NP+V+ DV G+ +GR+ +EL ADVVPKTAENFR CTGE GYKGS
Sbjct: 39 SSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGE-----KGFGYKGS 93
Query: 64 TFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQ 123
TFHRVI FM Q GDF N +GTG SIY F DENF L+H PG+LSMAN+GP+TNG Q
Sbjct: 94 TFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQ 153
Query: 124 FFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
FFI K DWLDGKHVVFG + +G+ V++KIE+ + K +VI+ CG++
Sbjct: 154 FFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSK-KIVITDCGQL 206
>gi|4758950 peptidylprolyl isomerase B precursor [Homo sapiens]
Length = 216
Score = 189 bits (479), Expect = 1e-48
Identities = 93/165 (56%), Positives = 114/165 (69%), Gaps = 5/165 (3%)
Query: 13 VFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDF 72
V+FD+ IG ++VGR+ LF VPKT +NF TGE GYK S FHRVIKDF
Sbjct: 46 VYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGE-----KGFGYKNSKFHRVIKDF 100
Query: 73 MIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCD 132
MIQGGDF GDGTG SIY F DENFKL+H PG +SMAN+G TNG QFFIT K
Sbjct: 101 MIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTA 160
Query: 133 WLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
WLDGKHVVFGK+++G+ V+RK+E+ T +KP V+I+ CG++
Sbjct: 161 WLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKI 205
>gi|10863927 peptidylprolyl isomerase A [Homo sapiens]
Length = 165
Score = 187 bits (475), Expect = 4e-48
Identities = 91/169 (53%), Positives = 117/169 (69%), Gaps = 6/169 (3%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
VNP VFFD+++ G+ +GR+ ELFAD VPKTAENFR TGE GYKGS FHR+
Sbjct: 2 VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGE-----KGFGYKGSCFHRI 56
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
I FM QGGDF +GTG SIY F DENF L+H+ PG+LSMAN+GP+TNG QFFI
Sbjct: 57 IPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICT 116
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
+K +WLDGKHVVFGK+ +G+ ++ +E + N K + I+ CG++
Sbjct: 117 AKTEWLDGKHVVFGKVKEGMNIVEAMERFGS-RNGKTSKKITIADCGQL 164
>gi|4505991 peptidylprolyl isomerase C [Homo sapiens]
Length = 212
Score = 183 bits (465), Expect = 6e-47
Identities = 97/169 (57%), Positives = 112/169 (66%), Gaps = 5/169 (2%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
V VFFDV IG ++VGR+ I LF VVPKT ENF TGE GYKGS FHRV
Sbjct: 36 VTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGE-----KGYGYKGSKFHRV 90
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
IKDFMIQGGD GDGTG SIY F DENFKL+H G +SMAN+GP TNG QFFIT
Sbjct: 91 IKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITL 150
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
+K WLDGKHVVFGK+IDG+ V+ IE T +++P I G++
Sbjct: 151 TKPTWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSIINSGKI 199
>gi|45439316 peptidylprolyl isomerase E isoform 2 [Homo sapiens]
Length = 296
Score = 183 bits (464), Expect = 8e-47
Identities = 89/153 (58%), Positives = 111/153 (72%), Gaps = 5/153 (3%)
Query: 3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKG 62
+A + NP V+ D+ IG + GR+++ L +DVVP TAENFR CT E G+KG
Sbjct: 132 IAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHE-----KGFGFKG 186
Query: 63 STFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGC 122
S+FHR+I FM QGGDF N +GTG SIY F DENF L+H+ PGLLSMANSGP+TNG
Sbjct: 187 SSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGS 246
Query: 123 QFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIE 155
QFF+TC K DWLDGKHVVFG++ +GL V+R+IE
Sbjct: 247 QFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE 279
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 173 bits (438), Expect = 8e-44
Identities = 90/170 (52%), Positives = 109/170 (64%), Gaps = 3/170 (1%)
Query: 11 PVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEF---RKDGVPIGYKGSTFHR 67
P FFD++I Q GR+ ELF+DV PKT ENFR CTGE + P+ YK FHR
Sbjct: 8 PRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHR 67
Query: 68 VIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFIT 127
V+KDFM+QGGDF G+G G SIY G F DE+F ++H+ LLSMAN G TNG QFFIT
Sbjct: 68 VVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFIT 127
Query: 128 CSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
LDG HVVFG++I G V+R+IEN T +KP V I CGE+
Sbjct: 128 TKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGEL 177
>gi|150418007 RAN binding protein 2 [Homo sapiens]
Length = 3224
Score = 171 bits (434), Expect = 2e-43
Identities = 88/177 (49%), Positives = 115/177 (64%), Gaps = 6/177 (3%)
Query: 1 MAVANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGY 60
+A S NPVVFFDV G+ +GR+ +ELF+++VP+TAENFR CTGE G+
Sbjct: 3054 LAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALCTGE-----KGFGF 3108
Query: 61 KGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTN 120
K S FHRVI DF+ QGGD DGTG SIY F DENF ++H+ PGLLSMAN G +TN
Sbjct: 3109 KNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTN 3168
Query: 121 GCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
QF IT K + LD KHVVFG + DG+ ++KIE+ + P + I++CG++
Sbjct: 3169 NSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGS-PKGSVCRRITITECGQI 3224
>gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G
[Homo sapiens]
Length = 164
Score = 166 bits (420), Expect = 1e-41
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 10/170 (5%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFH 66
VN V+FFD+++ G+ +GR+ I+ FAD +PKTAENFR TGE FR YKGS FH
Sbjct: 2 VNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFR-------YKGSCFH 54
Query: 67 RVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFI 126
R+I FM QGGDF + +GTG SIY F DEN +H+ G+LSMAN+GP+TNG QFFI
Sbjct: 55 RIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFI 114
Query: 127 TCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGE 176
+K +WLDGKHV FGK+ + + ++ +E+ N+K + I+ CG+
Sbjct: 115 CTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGY-RNSKTSKKITIADCGQ 163
>gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
sapiens]
Length = 272
Score = 166 bits (420), Expect = 1e-41
Identities = 84/170 (49%), Positives = 111/170 (65%), Gaps = 8/170 (4%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
VNP VFFD+S+ G+ +G + +FAD + KTA+NFR TGE D YKGS FHR+
Sbjct: 2 VNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLD-----YKGSCFHRI 56
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
I FM QGGDF +GTG S+Y F DENF L+ PG+LSMA +GP+TNG QFFI
Sbjct: 57 IPGFMCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICT 116
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGP-NNKPKLPVVISQCGEM 177
+K +WL GKHVVFGK+ +G+ ++ +E P G N K + I+ CG++
Sbjct: 117 AKTEWLIGKHVVFGKVKEGMNIVEAME--PFGSRNGKTSKKITIADCGQL 164
>gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B
[Homo sapiens]
Length = 164
Score = 165 bits (417), Expect = 2e-41
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 10/170 (5%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFH 66
VN VVFFD+++ G+ +GR+ I+LFAD + KTAENFR TGE FR YKGS FH
Sbjct: 2 VNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFR-------YKGSCFH 54
Query: 67 RVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFI 126
R+I FM QGGDF +GTG SIY F DEN +H+ G+LSMAN+GP+TNG QFFI
Sbjct: 55 RIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFI 114
Query: 127 TCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGE 176
+K +WLDGKHV FGK+ + + ++ +E+ N+K + I+ CG+
Sbjct: 115 CAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGY-RNSKTSKKITIADCGQ 163
>gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]
Length = 164
Score = 165 bits (417), Expect = 2e-41
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 10/170 (5%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFH 66
VN VVFFD+++ G+ +GR+ I+LFAD + KTAENFR TGE FR YKGS FH
Sbjct: 2 VNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFR-------YKGSCFH 54
Query: 67 RVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFI 126
R+I FM QGGDF +GTG SIY F DEN +H+ G+LSMAN+GP+TNG QFFI
Sbjct: 55 RIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFI 114
Query: 127 TCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGE 176
+K +WLDGKHV FGK+ + + ++ +E+ N+K + I+ CG+
Sbjct: 115 CAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGY-RNSKTSKKITIADCGQ 163
>gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C
[Homo sapiens]
Length = 164
Score = 165 bits (417), Expect = 2e-41
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 10/170 (5%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFH 66
VN VVFFD+++ G+ +GR+ I+LFAD + KTAENFR TGE FR YKGS FH
Sbjct: 2 VNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFR-------YKGSCFH 54
Query: 67 RVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFI 126
R+I FM QGGDF +GTG SIY F DEN +H+ G+LSMAN+GP+TNG QFFI
Sbjct: 55 RIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFI 114
Query: 127 TCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGE 176
+K +WLDGKHV FGK+ + + ++ +E+ N+K + I+ CG+
Sbjct: 115 CAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGY-RNSKTSKKITIADCGQ 163
>gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E
[Homo sapiens]
Length = 164
Score = 164 bits (415), Expect = 4e-41
Identities = 85/170 (50%), Positives = 112/170 (65%), Gaps = 10/170 (5%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFH 66
VN VVFF+++ G+ +GR+ I+LFAD +PKTAENFR TGE FR YKGS FH
Sbjct: 2 VNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFR-------YKGSCFH 54
Query: 67 RVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFI 126
R+I FM QGGDF +GTG SIY F DEN +H+ G+LSMAN+GP+TNG QFFI
Sbjct: 55 RIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFI 114
Query: 127 TCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGE 176
+K +WLDGKHV FGK+ + + ++ E+ N+K + I+ CG+
Sbjct: 115 CAAKTEWLDGKHVAFGKVKERVNIVEATEHFGY-RNSKTSKKITIADCGQ 163
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 164 bits (415), Expect = 4e-41
Identities = 85/168 (50%), Positives = 106/168 (63%), Gaps = 3/168 (1%)
Query: 11 PVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEF---RKDGVPIGYKGSTFHR 67
P FD+ I + VGR+ +LF+D+ PKT +NF C+GE + G + YKGSTFHR
Sbjct: 7 PQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHR 66
Query: 68 VIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFIT 127
V+K+FMIQGGDF G+G G SIY G F DENF L+H LLSMAN G TNG QFFIT
Sbjct: 67 VVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFIT 126
Query: 128 CSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCG 175
LDG HVVFG +I G V+ +IEN+ T ++P V + CG
Sbjct: 127 TKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCG 174
>gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]
Length = 165
Score = 164 bits (414), Expect = 5e-41
Identities = 83/169 (49%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
VNP VFF +S+ G+ +GR+ ELFAD PKTAENF TGE GYKG FHR+
Sbjct: 2 VNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGE-----KGFGYKGCCFHRI 56
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
I FM GGDF + +GTG SIY D+NF L+H+ PG+LSMAN+GP+TNG QFFI
Sbjct: 57 IPGFMCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICT 116
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
+K +WLD KHVV GK+ +G+ ++ +E+ + N K V I G++
Sbjct: 117 AKSEWLDSKHVVIGKVKEGMNIVEAMEHFGS-RNGKTSKKVTIPDFGQL 164
>gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
sapiens]
Length = 234
Score = 164 bits (414), Expect = 5e-41
Identities = 83/170 (48%), Positives = 110/170 (64%), Gaps = 8/170 (4%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
VNP VFFD+S+ G+ +G + +FAD + KTA+NFR TGE D YKGS FHR+
Sbjct: 2 VNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLD-----YKGSCFHRI 56
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
I FM QGGDF +GTG S+Y F DENF L+ PG+LSMA +GP+TNG QFFI
Sbjct: 57 IPGFMCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICT 116
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGP-NNKPKLPVVISQCGEM 177
+ +WL GKHVVFGK+ +G+ ++ +E P G N K + I+ CG++
Sbjct: 117 AXTEWLIGKHVVFGKVKEGMNIVEAME--PFGSRNGKTSKKITIADCGQL 164
>gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]
Length = 165
Score = 164 bits (414), Expect = 5e-41
Identities = 83/169 (49%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
VNP VFF +S+ G+ +GR+ ELFAD PKTAENF TGE GYKG FHR+
Sbjct: 2 VNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGE-----KGFGYKGCCFHRI 56
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
I FM GGDF + +GTG SIY D+NF L+H+ PG+LSMAN+GP+TNG QFFI
Sbjct: 57 IPGFMCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICT 116
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
+K +WLD KHVV GK+ +G+ ++ +E+ + N K V I G++
Sbjct: 117 AKSEWLDSKHVVIGKVKEGMNIVEAMEHFGS-RNGKTSKKVTIPDFGQL 164
>gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
sapiens]
Length = 234
Score = 164 bits (414), Expect = 5e-41
Identities = 83/170 (48%), Positives = 110/170 (64%), Gaps = 8/170 (4%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
VNP VFFD+S+ G+ +G + +FAD + KTA+NFR TGE D YKGS FHR+
Sbjct: 2 VNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLD-----YKGSCFHRI 56
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
I FM QGGDF +GTG S+Y F DENF L+ PG+LSMA +GP+TNG QFFI
Sbjct: 57 IPGFMCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICT 116
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGP-NNKPKLPVVISQCGEM 177
+ +WL GKHVVFGK+ +G+ ++ +E P G N K + I+ CG++
Sbjct: 117 AXTEWLIGKHVVFGKVKEGMNIVEAME--PFGSRNGKTSKKITIADCGQL 164
>gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A
isoform 2 [Homo sapiens]
Length = 165
Score = 164 bits (414), Expect = 5e-41
Identities = 83/169 (49%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
VNP VFF +S+ G+ +GR+ ELFAD PKTAENF TGE GYKG FHR+
Sbjct: 2 VNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGE-----KGFGYKGCCFHRI 56
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
I FM GGDF + +GTG SIY D+NF L+H+ PG+LSMAN+GP+TNG QFFI
Sbjct: 57 IPGFMCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICT 116
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
+K +WLD KHVV GK+ +G+ ++ +E+ + N K V I G++
Sbjct: 117 AKSEWLDSKHVVIGKVKEGMNIVEAMEHFGS-RNGKTSKKVTIPDFGQL 164
>gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]
Length = 164
Score = 162 bits (410), Expect = 1e-40
Identities = 81/169 (47%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
VNP VF D+++ G+ +G + ELFAD +PKT ENF TGE GYKGS FHR+
Sbjct: 2 VNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGE-----KGFGYKGSCFHRI 56
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
I M Q GDF + +GTG SI F D+NF L+H+ PG+LSMAN+GP+TN Q FI
Sbjct: 57 IPGVMCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICT 116
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
+K +WLDGKHVVFGK+ +G+ ++ +E + N K + IS CG++
Sbjct: 117 AKAEWLDGKHVVFGKVKEGINIVEAMERFGS-RNGKTSKKITISDCGKL 164
>gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]
Length = 164
Score = 162 bits (410), Expect = 1e-40
Identities = 81/169 (47%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
VNP VF D+++ G+ +G + ELFAD +PKT ENF TGE GYKGS FHR+
Sbjct: 2 VNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGE-----KGFGYKGSCFHRI 56
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
I M Q GDF + +GTG SI F D+NF L+H+ PG+LSMAN+GP+TN Q FI
Sbjct: 57 IPGVMCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICT 116
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
+K +WLDGKHVVFGK+ +G+ ++ +E + N K + IS CG++
Sbjct: 117 AKAEWLDGKHVVFGKVKEGINIVEAMERFGS-RNGKTSKKITISDCGKL 164
>gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]
Length = 164
Score = 162 bits (410), Expect = 1e-40
Identities = 81/169 (47%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
Query: 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRV 68
VNP VF D+++ G+ +G + ELFAD +PKT ENF TGE GYKGS FHR+
Sbjct: 2 VNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGE-----KGFGYKGSCFHRI 56
Query: 69 IKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITC 128
I M Q GDF + +GTG SI F D+NF L+H+ PG+LSMAN+GP+TN Q FI
Sbjct: 57 IPGVMCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICT 116
Query: 129 SKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
+K +WLDGKHVVFGK+ +G+ ++ +E + N K + IS CG++
Sbjct: 117 AKAEWLDGKHVVFGKVKEGINIVEAMERFGS-RNGKTSKKITISDCGKL 164
>gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]
Length = 168
Score = 159 bits (403), Expect = 9e-40
Identities = 80/167 (47%), Positives = 105/167 (62%), Gaps = 6/167 (3%)
Query: 11 PVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIK 70
P VFFD++I + +G + +LFAD PKTAENF TGE GYK S FHR+I
Sbjct: 7 PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGE-----KGFGYKSSCFHRIIP 61
Query: 71 DFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSK 130
FM QGGDF + +GTGV SIY F DENF L+H+ PG+ SMAN+GP+TNG QF +K
Sbjct: 62 GFMCQGGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAK 121
Query: 131 CDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
WLDG HVV GK+ +G+ + +E + N K + I+ CG++
Sbjct: 122 TAWLDGMHVVLGKVKEGMNIAEAMERFGS-RNGKTSKKITIADCGQL 167
>gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]
Length = 168
Score = 159 bits (403), Expect = 9e-40
Identities = 80/167 (47%), Positives = 105/167 (62%), Gaps = 6/167 (3%)
Query: 11 PVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIK 70
P VFFD++I + +G + +LFAD PKTAENF TGE GYK S FHR+I
Sbjct: 7 PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGE-----KGFGYKSSCFHRIIP 61
Query: 71 DFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSK 130
FM QGGDF + +GTGV SIY F DENF L+H+ PG+ SMAN+GP+TNG QF +K
Sbjct: 62 GFMCQGGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAK 121
Query: 131 CDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
WLDG HVV GK+ +G+ + +E + N K + I+ CG++
Sbjct: 122 TAWLDGMHVVLGKVKEGMNIAEAMERFGS-RNGKTSKKITIADCGQL 167
>gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]
Length = 168
Score = 159 bits (403), Expect = 9e-40
Identities = 80/167 (47%), Positives = 105/167 (62%), Gaps = 6/167 (3%)
Query: 11 PVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIK 70
P VFFD++I + +G + +LFAD PKTAENF TGE GYK S FHR+I
Sbjct: 7 PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGE-----KGFGYKSSCFHRIIP 61
Query: 71 DFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSK 130
FM QGGDF + +GTGV SIY F DENF L+H+ PG+ SMAN+GP+TNG QF +K
Sbjct: 62 GFMCQGGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAK 121
Query: 131 CDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177
WLDG HVV GK+ +G+ + +E + N K + I+ CG++
Sbjct: 122 TAWLDGMHVVLGKVKEGMNIAEAMERFGS-RNGKTSKKITIADCGQL 167
>gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
sapiens]
Length = 210
Score = 158 bits (400), Expect = 2e-39
Identities = 82/173 (47%), Positives = 109/173 (63%), Gaps = 8/173 (4%)
Query: 6 SSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTF 65
S+ VNP VFFD+++ G+ +G + ELFAD PK+AE TGE GYKGS F
Sbjct: 45 SATVNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGE-----KGFGYKGSCF 99
Query: 66 HRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFF 125
HR+I FM QGGDF TG S+YR F DENF L+H+ PG+LSMAN+GP+TN Q F
Sbjct: 100 HRIIPGFMCQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCF 159
Query: 126 ITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGP-NNKPKLPVVISQCGEM 177
I +K + LDGKHVVFG + +G+ ++ +E GP N K + I+ C ++
Sbjct: 160 ICTAKTEGLDGKHVVFGTVKEGMKIVEAMEYF--GPRNGKTSKEITIADCEQL 210
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.141 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,514,844
Number of Sequences: 37866
Number of extensions: 339493
Number of successful extensions: 626
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 470
Number of HSP's gapped (non-prelim): 81
length of query: 177
length of database: 18,247,518
effective HSP length: 95
effective length of query: 82
effective length of database: 14,650,248
effective search space: 1201320336
effective search space used: 1201320336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.