Guide to the Human Genome
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Name: PPIH Sequence: fasta or formatted (177aa) NCBI GI: 5454154
Description:

peptidylprolyl isomerase H

Referenced in:

Peptidylprolyl Isomerases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          8           1
 C cysteine            2.8          5           1
 D aspartate           5.6         10           1
 E glutamate           4.0          7           1
 F phenylalanine       7.9         14           2
 G glycine            11.9         21           2
 H histidine           1.7          3           1
 I isoleucine          6.2         11           2
 K lysine              6.8         12           1
 L leucine             4.5          8           2
 M methionine          3.4          6           1
 N asparagine          5.6         10           2
 P proline             6.2         11           1
 Q glutamine           2.8          5           1
 R arginine            4.0          7           1
 S serine              6.2         11           2
 T threonine           4.0          7           1
 V valine             10.2         18           2
 W tryptophan          0.6          1           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peptidylprolyl isomerase H 
PPID                  0.496   peptidylprolyl isomerase D 
PPIE                  0.496   peptidylprolyl isomerase E isoform 3 
PPIE                  0.496   peptidylprolyl isomerase E isoform 1 
PPIF                  0.484   peptidylprolyl isomerase F precursor 
PPIB                  0.478   peptidylprolyl isomerase B precursor 
PPIA                  0.472   peptidylprolyl isomerase A 
PPIC                  0.461   peptidylprolyl isomerase C 
PPIE                  0.461   peptidylprolyl isomerase E isoform 2 
PPIG                  0.431   peptidylprolyl isomerase G 
RANBP2                0.426   RAN binding protein 2 
PPIAL4G               0.411   peptidylprolyl isomerase A (cyclophilin A)-like 4G ...
LOC650157             0.411   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
PPIAL4B               0.408   peptidylprolyl isomerase A (cyclophilin A)-like 4B ...
PPIAL4A               0.408   peptidylprolyl isomerase A-like 4A 
PPIAL4C               0.408   peptidylprolyl isomerase A (cyclophilin A)-like 4C ...
PPIAL4E               0.405   peptidylprolyl isomerase A (cyclophilin A)-like 4E ...
NKTR                  0.405   natural killer-tumor recognition sequence 
LOC643997             0.405   PREDICTED: similar to TRIMCyp isoform 1 
LOC650157             0.405   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC643997             0.405   PREDICTED: similar to TRIMCyp isoform 2 
LOC650157             0.405   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC643997             0.405   PREDICTED: similar to peptidylprolyl isomerase A iso...
LOC131055             0.399   PREDICTED: similar to TRIMCyp 
LOC131055             0.399   PREDICTED: similar to TRIMCyp 
LOC131055             0.399   PREDICTED: similar to TRIMCyp 
LOC342541             0.391   PREDICTED: similar to TRIMCyp 
LOC342541             0.391   PREDICTED: similar to TRIMCyp 
LOC342541             0.391   PREDICTED: similar to TRIMCyp 
LOC390956             0.388   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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