LOC643997 36738

Name: LOC643997	Sequence: fasta or formatted (165aa)		NCBI GI: 88958081
Description: PREDICTED: similar to TRIMCyp isoform 2		Referenced in: Peptidylprolyl Isomerases
Other entries for this name: alt mRNA [165aa] PREDICTED: similar to TRIMCyp isoform 1 alt prot [136aa] PREDICTED: similar to peptidylprolyl isomerase A isoform 1 alt prot [136aa] PREDICTED: similar to TRIMCyp isoform 1 alt prot [136aa] PREDICTED: similar to TRIMCyp isoform 2 alt mRNA [165aa] PREDICTED: similar to peptidylprolyl isomerase A isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.2 7 1 C cysteine 3.0 5 2 D aspartate 4.8 8 3 E glutamate 6.1 10 1 F phenylalanine 9.1 15 2 G glycine 13.3 22 2 H histidine 4.8 8 2 I isoleucine 6.7 11 2 K lysine 8.5 14 2 L leucine 4.2 7 1 M methionine 3.0 5 1 N asparagine 6.1 10 1 P proline 3.6 6 1 Q glutamine 1.2 2 1 R arginine 1.8 3 1 S serine 6.1 10 1 T threonine 6.1 10 1 V valine 5.5 9 2 W tryptophan 0.6 1 1 Y tyrosine 1.2 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 1.000 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 1.000 PREDICTED: similar to peptidylprolyl isomerase A iso... PPIA 0.859 peptidylprolyl isomerase A LOC342541 0.774 PREDICTED: similar to TRIMCyp LOC342541 0.774 PREDICTED: similar to TRIMCyp LOC342541 0.774 PREDICTED: similar to TRIMCyp LOC643997 0.768 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 0.768 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 0.768 PREDICTED: similar to peptidylprolyl isomerase A is... LOC650157 0.755 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC131055 0.752 PREDICTED: similar to TRIMCyp LOC131055 0.752 PREDICTED: similar to TRIMCyp LOC131055 0.752 PREDICTED: similar to TRIMCyp PPIAL4G 0.749 peptidylprolyl isomerase A (cyclophilin A)-like 4G ... LOC650157 0.749 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.749 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.749 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.749 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.749 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... PPIAL4B 0.743 peptidylprolyl isomerase A (cyclophilin A)-like 4B ... PPIAL4A 0.743 peptidylprolyl isomerase A-like 4A PPIAL4C 0.743 peptidylprolyl isomerase A (cyclophilin A)-like 4C ... LOC390956 0.743 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC390956 0.743 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC390956 0.743 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC401859 0.734 PREDICTED: similar to TRIMCyp LOC401859 0.734 PREDICTED: similar to TRIMCyp PPIAL4E 0.728 peptidylprolyl isomerase A (cyclophilin A)-like 4E ... PPIF 0.661 peptidylprolyl isomerase F precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.