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Search of human proteins with 54144646
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|54144646 vacuolar protein sorting 24 isoform 2 [Homo
sapiens]
(156 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7706353 vacuolar protein sorting 24 isoform 1 [Homo sapiens] 294 2e-80
gi|54144646 vacuolar protein sorting 24 isoform 2 [Homo sapiens] 294 2e-80
gi|40254866 chromatin modifying protein 2B [Homo sapiens] 62 2e-10
gi|38372933 chromatin modifying protein 2A [Homo sapiens] 54 5e-08
gi|7656922 chromatin modifying protein 2A [Homo sapiens] 54 5e-08
gi|121949802 cancer/testis antigen family 47, member A1 [Homo sa... 40 0.001
gi|121949798 cancer/testis antigen family 47, member A2 [Homo sa... 40 0.001
gi|121949773 cancer/testis antigen family 47, member A3 [Homo sa... 40 0.001
gi|121949771 cancer/testis antigen family 47, member A4 [Homo sa... 40 0.001
gi|121949796 cancer/testis antigen family 47, member A5 [Homo sa... 40 0.001
gi|121949794 cancer/testis antigen family 47, member A6 [Homo sa... 40 0.001
gi|121949792 cancer/testis antigen family 47, member A7 [Homo sa... 40 0.001
gi|121949790 cancer/testis antigen family 47, member A8 [Homo sa... 40 0.001
gi|121949788 cancer/testis antigen family 47, member A9 [Homo sa... 40 0.001
gi|121949786 cancer/testis antigen family 47, member A10 [Homo s... 40 0.001
gi|122114660 cancer/testis antigen family 47, member A11 [Homo s... 40 0.001
gi|109134347 NY-REN-58 antigen [Homo sapiens] 37 0.009
gi|109134355 NY-REN-58 antigen [Homo sapiens] 37 0.009
gi|224591404 cancer/testis antigen family 147, member B1 [Homo s... 36 0.012
gi|82830424 gon-4-like isoform a [Homo sapiens] 36 0.015
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 35 0.020
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 35 0.020
gi|113430055 PREDICTED: similar to cancer/testis antigen family ... 34 0.044
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 34 0.044
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 33 0.098
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 33 0.098
gi|239747212 PREDICTED: hypothetical protein XP_002346939 [Homo ... 33 0.13
gi|41349472 PR domain containing 16 isoform 2 [Homo sapiens] 33 0.13
gi|41349470 PR domain containing 16 isoform 1 [Homo sapiens] 33 0.13
gi|156104908 myosin heavy chain 6 [Homo sapiens] 33 0.13
>gi|7706353 vacuolar protein sorting 24 isoform 1 [Homo sapiens]
Length = 222
Score = 294 bits (752), Expect = 2e-80
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT 60
MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT
Sbjct: 67 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT 126
Query: 61 MRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTD 120
MRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTD
Sbjct: 127 MRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTD 186
Query: 121 ALPEPEPPGAMAASEDEEEEEEALEAMQSRLATLRS 156
ALPEPEPPGAMAASEDEEEEEEALEAMQSRLATLRS
Sbjct: 187 ALPEPEPPGAMAASEDEEEEEEALEAMQSRLATLRS 222
>gi|54144646 vacuolar protein sorting 24 isoform 2 [Homo sapiens]
Length = 156
Score = 294 bits (752), Expect = 2e-80
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT 60
MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT
Sbjct: 1 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT 60
Query: 61 MRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTD 120
MRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTD
Sbjct: 61 MRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTD 120
Query: 121 ALPEPEPPGAMAASEDEEEEEEALEAMQSRLATLRS 156
ALPEPEPPGAMAASEDEEEEEEALEAMQSRLATLRS
Sbjct: 121 ALPEPEPPGAMAASEDEEEEEEALEAMQSRLATLRS 156
>gi|40254866 chromatin modifying protein 2B [Homo sapiens]
Length = 213
Score = 62.4 bits (150), Expect = 2e-10
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 1 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT 60
++ RK ++ +A + + S+ K + +++AG++ + + M+A+ + + T
Sbjct: 65 LVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQT 124
Query: 61 MRELSKEMMKAGIIEEMLEDT----FESMDDQEEMEEEAEMEIDRILFEITAGALGKAPS 116
M+ KE MK + EEM+ DT F+ DD+EE ++ +D I EI +G + KAPS
Sbjct: 125 MQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEI-SGKMAKAPS 183
Query: 117 KVTDALPEPEPPGAMAASEDEEEEEEAL 144
+LP A + E+ E + +AL
Sbjct: 184 -AARSLPSASTSKATISDEEIERQLKAL 210
>gi|38372933 chromatin modifying protein 2A [Homo sapiens]
Length = 222
Score = 53.9 bits (128), Expect = 5e-08
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 1 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT 60
++R+R+ V K +A++ +V + ++ + +A +++ T+ M M +K+P+IQ
Sbjct: 66 LVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKI 125
Query: 61 MRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTD 120
M E ++ + EEM+ D + EE EEE++ + ++L E+ +TD
Sbjct: 126 MMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGL--------SLTD 177
Query: 121 ALPE-PEPPGAMAASEDEEEEEEALEAMQSRLATL 154
L P G+++ + ++ E A A+ A L
Sbjct: 178 ELSNLPSTGGSLSVAAGGKKAEAAASALADADADL 212
>gi|7656922 chromatin modifying protein 2A [Homo sapiens]
Length = 222
Score = 53.9 bits (128), Expect = 5e-08
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 1 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT 60
++R+R+ V K +A++ +V + ++ + +A +++ T+ M M +K+P+IQ
Sbjct: 66 LVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKI 125
Query: 61 MRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTD 120
M E ++ + EEM+ D + EE EEE++ + ++L E+ +TD
Sbjct: 126 MMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGL--------SLTD 177
Query: 121 ALPE-PEPPGAMAASEDEEEEEEALEAMQSRLATL 154
L P G+++ + ++ E A A+ A L
Sbjct: 178 ELSNLPSTGGSLSVAAGGKKAEAAASALADADADL 212
>gi|121949802 cancer/testis antigen family 47, member A1 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|121949798 cancer/testis antigen family 47, member A2 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|121949773 cancer/testis antigen family 47, member A3 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|121949771 cancer/testis antigen family 47, member A4 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|121949796 cancer/testis antigen family 47, member A5 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|121949794 cancer/testis antigen family 47, member A6 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|121949792 cancer/testis antigen family 47, member A7 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|121949790 cancer/testis antigen family 47, member A8 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|121949788 cancer/testis antigen family 47, member A9 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|121949786 cancer/testis antigen family 47, member A10 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|122114660 cancer/testis antigen family 47, member A11 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 35 AGSLQKSTEVMKAMQSLVKIPE--IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEME 92
AG+ ++ E + +Q +PE + A + E+++E + E++ E+ E D +E
Sbjct: 176 AGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPAT 235
Query: 93 EEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 142
EE + E TA P +VT + PE A A+ +EE+E+E
Sbjct: 236 EEPTAQ------EATA------PEEVTKSQPEKWDEEAQDAAGEEEKEQE 273
>gi|109134347 NY-REN-58 antigen [Homo sapiens]
Length = 701
Score = 36.6 bits (83), Expect = 0.009
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 1 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVK-IPEIQA 59
+ + K V +L K ++ L G++ ++A L+ A +V A + V+ + E+QA
Sbjct: 203 LTKDSKRVEQLAREKVYLCQKLKGLEAEVAELK-AEKENSEAQVENAQRIQVRQLAEMQA 261
Query: 60 TMRELSKEMMKAGIIEEMLEDTFESMDDQE----EMEEEAEMEIDRI 102
T+R L E A + E LE +S +Q +AE EI+ +
Sbjct: 262 TVRSLEAEKQSANLRAERLEKELQSSSEQNTFLINKLHKAEREINTL 308
>gi|109134355 NY-REN-58 antigen [Homo sapiens]
Length = 701
Score = 36.6 bits (83), Expect = 0.009
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 1 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVK-IPEIQA 59
+ + K V +L K ++ L G++ ++A L+ A +V A + V+ + E+QA
Sbjct: 203 LTKDSKRVEQLAREKVYLCQKLKGLEAEVAELK-AEKENSEAQVENAQRIQVRQLAEMQA 261
Query: 60 TMRELSKEMMKAGIIEEMLEDTFESMDDQE----EMEEEAEMEIDRI 102
T+R L E A + E LE +S +Q +AE EI+ +
Sbjct: 262 TVRSLEAEKQSANLRAERLEKELQSSSEQNTFLINKLHKAEREINTL 308
>gi|224591404 cancer/testis antigen family 147, member B1 [Homo
sapiens]
Length = 299
Score = 36.2 bits (82), Expect = 0.012
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 36 GSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEA 95
G +Q++ V +A V P + A + E+++E + E+ E+ E +E EE A
Sbjct: 188 GLIQEAASVQEAAS--VPEPAVPADLAEMAREPAEEAADEKPPEEAAEEKLTEEATEEPA 245
Query: 96 EMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEEALEAMQSRL 151
E AP +VT + PE A A+ +EE+E+E + +++++
Sbjct: 246 AEE--------PTSEEAVAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDVENKV 293
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 35.8 bits (81), Expect = 0.015
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 49 QSLVKIPEIQATMRELS-----KEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRIL 103
+S++ +PE+Q TM +L+ + M + G EE S ++EE EE ME +
Sbjct: 1482 ESVLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSEPEEEEEEEAEGMESLQKE 1541
Query: 104 FEITAGALGKAPSK-VTDALPEPEP 127
E+T A+G + K T A PE P
Sbjct: 1542 DEMTDEAVGDSAEKPPTFASPETAP 1566
Score = 28.1 bits (61), Expect = 3.2
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 75 EEMLEDTFESM--DDQEEMEEEAEM------EIDRILFEITAGALGKAPSKVTDALPEPE 126
EE E+ F+ + D+++EM +E E+ + ++T A + S+ ++ E
Sbjct: 1458 EEEEEEDFDDLTQDEEDEMSSASEESVLSVPELQETMEKLTWLASERRMSQEGESEEENS 1517
Query: 127 PPGAMAASEDEEEEEEALEAMQ 148
E+EEEE E +E++Q
Sbjct: 1518 QEENSEPEEEEEEEAEGMESLQ 1539
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 35.4 bits (80), Expect = 0.020
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 83 ESMDDQEEMEEEAEMEIDRILFEITA------GALGKAPSKVTDALPEPEPPGAMAASED 136
E +++EE EEEAE E L G G + + EP P A A ED
Sbjct: 37 EEEEEEEEEEEEAEAEAVAALLLNGGSGGGGGGGGGGVGGGEAETMSEPSPESASQAGED 96
Query: 137 EEEEEE 142
E+EEE+
Sbjct: 97 EDEEED 102
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 35.4 bits (80), Expect = 0.020
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 83 ESMDDQEEMEEEAEMEIDRILFEITA------GALGKAPSKVTDALPEPEPPGAMAASED 136
E +++EE EEEAE E L G G + + EP P A A ED
Sbjct: 37 EEEEEEEEEEEEAEAEAVAALLLNGGSGGGGGGGGGGVGGGEAETMSEPSPESASQAGED 96
Query: 137 EEEEEE 142
E+EEE+
Sbjct: 97 EDEEED 102
>gi|113430055 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 1 [Homo sapiens]
Length = 284
Score = 34.3 bits (77), Expect = 0.044
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 50 SLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAG 109
+LV PE+ A + E+++E + EE+ E+ E +E EE E A
Sbjct: 185 ALVPEPEVPADLAEMAREPAEEPAEEELAEEAAEEPAKEEPAAEEESA-------EEPAT 237
Query: 110 ALGKAPSKVTDALPEPEPPGAMAASEDEEEEEEALEA 146
AP +VT E A A+ EE+EE+ +A
Sbjct: 238 EEAAAPEEVTKYQHEKWDEEAQDAAGKEEKEEKEKDA 274
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 34.3 bits (77), Expect = 0.044
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 76 EMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPE--PEPPGAMAA 133
E E+ E +++EE EEE E E + E G G PS++ + L + E PGA A
Sbjct: 457 EPAEEEAEEEEEEEEAEEEEEEEEEEEEEEEDEGCKGLFPSELDEELEDRPHEEPGAAAG 516
Query: 134 SEDEEE 139
S +++
Sbjct: 517 SSSKKD 522
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 33.1 bits (74), Expect = 0.098
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 36 GSLQKSTEVMKAMQS------LVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMD--- 86
G L + + +A+ S L +++ R+L +E+ + L+ D
Sbjct: 1285 GELSRQLDEKEALISQLTRGKLTYTQQLEDLKRQLEEEVKAKNALAHALQSARHDCDLLR 1344
Query: 87 DQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEPE--PPGAMAASEDEEEEEEAL 144
+Q E E EA+ E+ R+L + + TDA+ E ++ +E EEA+
Sbjct: 1345 EQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEAV 1404
Query: 145 EAMQSRLATL 154
EA+ ++ ++L
Sbjct: 1405 EAVNAKCSSL 1414
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 33.1 bits (74), Expect = 0.098
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 52 VKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEE-EAEMEIDRILFEITAGA 110
V+ PE + +E E E E E+ + E++E EAE E+ + GA
Sbjct: 1851 VEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQ----PESEGA 1906
Query: 111 LGKAPSKVTDALPEPEPPGAMAASEDEEEEEEALEAMQSRLA 152
+AP +A PE E A+ ++E E E EA ++ A
Sbjct: 1907 --EAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEA 1946
Score = 28.9 bits (63), Expect = 1.8
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 39 QKSTEVMKAMQSLVKI-PEIQ-ATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAE 96
Q TE ++A+++ + PE + A +E + +A + + ES + +EE + E+E
Sbjct: 1916 QPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESE 1975
Query: 97 MEIDRILFEI-TAGALGKAPSKVTDALPEPEPPGAMAASEDE-EEEEEALEA 146
+++ + E+ T A G+A + D + PE G M +E+E + E + +EA
Sbjct: 1976 -DVEALEVEVETQEAEGEAQPESED-VEAPEAEGEMQEAEEEAQPESDGVEA 2025
Score = 26.9 bits (58), Expect = 7.0
Identities = 33/138 (23%), Positives = 50/138 (36%), Gaps = 27/138 (19%)
Query: 34 VAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKA-GIIEEMLEDTFESMDDQEEME 92
V G QK+ + V+ PE + +E E+ +A G ED D +E E
Sbjct: 2037 VEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDV-----DAQEAE 2091
Query: 93 EEAEMEIDRILFEITAGALGKA---------------------PSKVTDALPEPEPPGAM 131
EA+ E + + G KA P +A PE E A
Sbjct: 2092 GEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQ 2151
Query: 132 AASEDEEEEEEALEAMQS 149
A + + E E +EA ++
Sbjct: 2152 DAEGEAQPESEGIEAQEA 2169
Score = 26.9 bits (58), Expect = 7.0
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 87 DQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEEALEA 146
+ +E EEEA+ E++ + +AP +A PE E A A + + E E +EA
Sbjct: 2165 EAQEAEEEAQPELEGV----------EAPEAEGEAQPESEGIEAPEAEGEAQPELEGVEA 2214
Query: 147 MQS 149
++
Sbjct: 2215 PEA 2217
>gi|239747212 PREDICTED: hypothetical protein XP_002346939 [Homo
sapiens]
Length = 1158
Score = 32.7 bits (73), Expect = 0.13
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 56 EIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAP 115
E +A M+ + G+ E ED E DD E ++E + GK+
Sbjct: 994 EKRADMQIVDGSAQCPGLASEKQEDVEEEDDDDLEEDDEDSLA-------------GKSQ 1040
Query: 116 SKVTDALPEPEPPGAMAASEDEEEEEEA 143
PEP+ AA EDEE+EE A
Sbjct: 1041 DDTVSPAPEPQ-----AAYEDEEDEEPA 1063
>gi|41349472 PR domain containing 16 isoform 2 [Homo sapiens]
Length = 1256
Score = 32.7 bits (73), Expect = 0.13
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 56 EIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAP 115
E +A M+ + G+ E ED E DD E ++E + GK+
Sbjct: 1092 EKRADMQIVDGSAQCPGLASEKQEDVEEEDDDDLEEDDEDSLA-------------GKSQ 1138
Query: 116 SKVTDALPEPEPPGAMAASEDEEEEEEA 143
PEP+ AA EDEE+EE A
Sbjct: 1139 DDTVSPAPEPQ-----AAYEDEEDEEPA 1161
>gi|41349470 PR domain containing 16 isoform 1 [Homo sapiens]
Length = 1275
Score = 32.7 bits (73), Expect = 0.13
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 56 EIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAP 115
E +A M+ + G+ E ED E DD E ++E + GK+
Sbjct: 1092 EKRADMQIVDGSAQCPGLASEKQEDVEEEDDDDLEEDDEDSLA-------------GKSQ 1138
Query: 116 SKVTDALPEPEPPGAMAASEDEEEEEEA 143
PEP+ AA EDEE+EE A
Sbjct: 1139 DDTVSPAPEPQ-----AAYEDEEDEEPA 1161
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 32.7 bits (73), Expect = 0.13
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 36 GSLQKSTEVMKAMQSLVKIPEIQAT--MRELSKEMMKAGIIEEMLEDTFES-------MD 86
G L + E +A+ S + ++ T M +L +++ + G + L +S +
Sbjct: 1287 GELARQLEEKEALISQLTRGKLSYTQQMEDLKRQLEEEGKAKNALAHALQSARHDCDLLR 1346
Query: 87 DQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEPE--PPGAMAASEDEEEEEEAL 144
+Q E E EA+ E+ R+L + + TDA+ E ++ ++ EEA+
Sbjct: 1347 EQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEAV 1406
Query: 145 EAMQSRLATL 154
EA+ ++ ++L
Sbjct: 1407 EAVNAKCSSL 1416
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.122 0.305
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,215,618
Number of Sequences: 37866
Number of extensions: 237715
Number of successful extensions: 3575
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 228
Number of HSP's that attempted gapping in prelim test: 2873
Number of HSP's gapped (non-prelim): 809
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.