Guide to the Human Genome
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Name: RNPEPL1 Sequence: fasta or formatted (494aa) NCBI GI: 54020718
Description:

arginyl aminopeptidase (aminopeptidase B)-like 1

Referenced in:

Aminopeptidases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         46           3
 C cysteine            1.6          8           1
 D aspartate           5.5         27           2
 E glutamate           7.5         37           3
 F phenylalanine       4.9         24           2
 G glycine             4.7         23           1
 H histidine           1.8          9           1
 I isoleucine          3.6         18           2
 K lysine              2.6         13           1
 L leucine            12.6         62           3
 M methionine          2.4         12           1
 N asparagine          2.0         10           1
 P proline             5.9         29           2
 Q glutamine           4.3         21           2
 R arginine            5.5         27           2
 S serine              9.1         45           2
 T threonine           5.1         25           2
 V valine              5.9         29           2
 W tryptophan          2.0         10           1
 Y tyrosine            3.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arginyl aminopeptidase (aminopeptidase B)-like 1 [Ho... 
RNPEP                 0.445   arginyl aminopeptidase 
LTA4H                 0.226   leukotriene A4 hydrolase 
ERAP1                 0.058   type 1 tumor necrosis factor receptor shedding amino...
ERAP1                 0.058   type 1 tumor necrosis factor receptor shedding amino...
ANPEP                 0.053   membrane alanine aminopeptidase precursor 
ERAP2                 0.049   endoplasmic reticulum aminopeptidase 2 
ERAP2                 0.049   endoplasmic reticulum aminopeptidase 2 
LVRN                  0.046   laeverin 
C9orf3                0.045   aminopeptidase O 
LNPEP                 0.045   leucyl/cystinyl aminopeptidase isoform 1 
LNPEP                 0.045   leucyl/cystinyl aminopeptidase isoform 2 
TRHDE                 0.043   thyrotropin-releasing hormone degrading enzyme 
NPEPPS                0.035   aminopeptidase puromycin sensitive 
ENPEP                 0.034   glutamyl aminopeptidase 
NUP98                 0.009   nucleoporin 98kD isoform 4 
NUP98                 0.009   nucleoporin 98kD isoform 1 
TRIM10                0.006   tripartite motif-containing 10 isoform 1 
NPHP3                 0.005   nephrocystin 3 
IRF3                  0.005   interferon regulatory factor 3 
GBF1                  0.005   golgi-specific brefeldin A resistant guanine nucleoti...
LOC100291055          0.004   PREDICTED: hypothetical protein XP_002347125 
TAF2                  0.004   TBP-associated factor 2 
C9orf139              0.004   hypothetical protein LOC401563 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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