PKP1 32363

Name: PKP1	Sequence: fasta or formatted (747aa)		NCBI GI: 53729346
Description: plakophilin 1 isoform 1b		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [726aa] plakophilin 1 isoform 1a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 52 3 C cysteine 3.1 23 1 D aspartate 4.4 33 2 E glutamate 4.1 31 3 F phenylalanine 2.3 17 2 G glycine 6.6 49 2 H histidine 1.3 10 1 I isoleucine 3.2 24 2 K lysine 5.5 41 2 L leucine 9.9 74 3 M methionine 3.1 23 2 N asparagine 6.4 48 3 P proline 3.7 28 2 Q glutamine 5.9 44 2 R arginine 6.8 51 2 S serine 12.3 92 3 T threonine 5.5 41 2 V valine 4.0 30 2 W tryptophan 0.8 6 1 Y tyrosine 4.0 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 plakophilin 1 isoform 1b PKP1 0.966 plakophilin 1 isoform 1a LOC652798 0.828 PREDICTED: similar to plakophilin 1, partial PKP2 0.220 plakophilin 2 isoform 2a PKP2 0.206 plakophilin 2 isoform 2b PKP4 0.159 plakophilin 4 isoform b PKP4 0.159 plakophilin 4 isoform a CTNND2 0.153 catenin (cadherin-associated protein), delta 2 (neur... PKP3 0.151 plakophilin 3 ARVCF 0.142 armadillo repeat protein CTNND1 0.131 catenin, delta 1 isoform 3A CTNND1 0.131 catenin, delta 1 isoform 3A CTNND1 0.131 catenin, delta 1 isoform 3A CTNND1 0.131 catenin, delta 1 isoform 3B CTNND1 0.131 catenin, delta 1 isoform 3AB CTNND1 0.131 catenin, delta 1 isoform 1A CTNND1 0.131 catenin, delta 1 isoform 1A CTNND1 0.131 catenin, delta 1 isoform 1A CTNND1 0.131 catenin, delta 1 isoform 1B CTNND1 0.131 catenin, delta 1 isoform 1AB CTNND1 0.129 catenin, delta 1 isoform 3AC CTNND1 0.129 catenin, delta 1 isoform 3ABC CTNND1 0.129 catenin, delta 1 isoform 1ABC ARMC3 0.012 armadillo repeat containing 3 APC 0.011 adenomatous polyposis coli APC 0.011 adenomatous polyposis coli APC 0.011 adenomatous polyposis coli RAP1GDS1 0.009 RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [... CTNNB1 0.009 catenin (cadherin-associated protein), beta 1, 88kD... CTNNB1 0.009 catenin (cadherin-associated protein), beta 1, 88kD... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.