Guide to the Human Genome
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Name: OR6C1 Sequence: fasta or formatted (312aa) NCBI GI: 52353943
Description:

olfactory receptor, family 6, subfamily C, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         14           2
 C cysteine            3.2         10           1
 D aspartate           2.9          9           2
 E glutamate           1.6          5           1
 F phenylalanine       9.6         30           3
 G glycine             2.6          8           1
 H histidine           1.9          6           1
 I isoleucine         10.6         33           2
 K lysine              3.5         11           1
 L leucine            13.5         42           3
 M methionine          4.2         13           2
 N asparagine          4.2         13           2
 P proline             3.2         10           1
 Q glutamine           2.6          8           2
 R arginine            3.8         12           2
 S serine              9.3         29           2
 T threonine           8.7         27           2
 V valine              6.1         19           3
 W tryptophan          0.3          1           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 6, subfamily C, member 1 ... 
OR6C3                 0.774   olfactory receptor, family 6, subfamily C, member 3 ...
OR6C75                0.725   olfactory receptor, family 6, subfamily C, member 75...
OR6C74                0.696   olfactory receptor, family 6, subfamily C, member 74...
OR6C76                0.684   olfactory receptor, family 6, subfamily C, member 76...
OR6C2                 0.666   olfactory receptor, family 6, subfamily C, member 2 ...
OR6C4                 0.657   olfactory receptor, family 6, subfamily C, member 4 ...
OR6C65                0.649   olfactory receptor, family 6, subfamily C, member 65...
OR6C70                0.645   olfactory receptor, family 6, subfamily C, member 70...
OR6C6                 0.637   olfactory receptor, family 6, subfamily C, member 6 ...
OR6C68                0.611   olfactory receptor, family 6, subfamily C, member 68...
OR6M1                 0.444   olfactory receptor, family 6, subfamily M, member 1 ...
OR6T1                 0.436   olfactory receptor, family 6, subfamily T, member 1 ...
OR5B12                0.432   olfactory receptor, family 5, subfamily B, member 12...
OR6X1                 0.431   olfactory receptor, family 6, subfamily X, member 1 ...
OR5B21                0.419   olfactory receptor, family 5, subfamily B, member 21...
OR6F1                 0.419   olfactory receptor, family 6, subfamily F, member 1 ...
OR8H1                 0.417   olfactory receptor, family 8, subfamily H, member 1 ...
OR10A7                0.417   olfactory receptor, family 10, subfamily A, member 7...
OR8U8                 0.416   olfactory receptor, family 8, subfamily U, member 8 ...
OR8U1                 0.416   olfactory receptor, family 8, subfamily U, member 1 ...
OR8H3                 0.416   olfactory receptor, family 8, subfamily H, member 3 ...
OR8U9                 0.414   olfactory receptor, family 8, subfamily U, member 9 ...
OR5M1                 0.412   olfactory receptor, family 5, subfamily M, member 1 ...
OR5B2                 0.410   olfactory receptor, family 5, subfamily B, member 2 ...
OR8K1                 0.409   olfactory receptor, family 8, subfamily K, member 1 ...
OR5M10                0.407   olfactory receptor, family 5, subfamily M, member 10...
OR6S1                 0.407   olfactory receptor, family 6, subfamily S, member 1 ...
OR8J3                 0.407   olfactory receptor, family 8, subfamily J, member 3 ...
OR8B3                 0.407   olfactory receptor, family 8, subfamily B, member 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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