Guide to the Human Genome
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Name: OR6C2 Sequence: fasta or formatted (312aa) NCBI GI: 50080219
Description:

olfactory receptor, family 6, subfamily C, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         18           2
 C cysteine            3.8         12           2
 D aspartate           3.2         10           1
 E glutamate           1.6          5           1
 F phenylalanine       7.7         24           2
 G glycine             3.2         10           1
 H histidine           2.2          7           2
 I isoleucine         10.3         32           2
 K lysine              4.8         15           2
 L leucine            13.1         41           2
 M methionine          3.2         10           1
 N asparagine          3.8         12           2
 P proline             3.5         11           2
 Q glutamine           2.6          8           2
 R arginine            2.9          9           1
 S serine              7.7         24           2
 T threonine           7.1         22           2
 V valine              9.0         28           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 6, subfamily C, member 2 ... 
OR6C68                0.771   olfactory receptor, family 6, subfamily C, member 68...
OR6C74                0.728   olfactory receptor, family 6, subfamily C, member 74...
OR6C76                0.704   olfactory receptor, family 6, subfamily C, member 76...
OR6C3                 0.692   olfactory receptor, family 6, subfamily C, member 3 ...
OR6C75                0.677   olfactory receptor, family 6, subfamily C, member 75...
OR6C65                0.674   olfactory receptor, family 6, subfamily C, member 65...
OR6C4                 0.674   olfactory receptor, family 6, subfamily C, member 4 ...
OR6C1                 0.662   olfactory receptor, family 6, subfamily C, member 1 ...
OR6C6                 0.659   olfactory receptor, family 6, subfamily C, member 6 ...
OR6C70                0.644   olfactory receptor, family 6, subfamily C, member 70...
OR6M1                 0.439   olfactory receptor, family 6, subfamily M, member 1 ...
OR6T1                 0.434   olfactory receptor, family 6, subfamily T, member 1 ...
OR5B12                0.425   olfactory receptor, family 5, subfamily B, member 12...
OR6F1                 0.422   olfactory receptor, family 6, subfamily F, member 1 ...
OR6X1                 0.418   olfactory receptor, family 6, subfamily X, member 1 ...
OR6S1                 0.415   olfactory receptor, family 6, subfamily S, member 1 ...
OR9A4                 0.413   olfactory receptor, family 9, subfamily A, member 4 ...
OR2B6                 0.410   olfactory receptor, family 2, subfamily B, member 6 ...
OR2G3                 0.407   olfactory receptor, family 2, subfamily G, member 3 ...
OR10A7                0.403   olfactory receptor, family 10, subfamily A, member 7...
OR5V1                 0.398   olfactory receptor, family 5, subfamily V, member 1 ...
OR5B17                0.398   olfactory receptor, family 5, subfamily B, member 17...
OR2W3                 0.397   olfactory receptor, family 2, subfamily W, member 3 ...
OR5B21                0.395   olfactory receptor, family 5, subfamily B, member 21...
OR8K5                 0.393   olfactory receptor, family 8, subfamily K, member 5...
OR9A2                 0.392   olfactory receptor, family 9, subfamily A, member 2 ...
OR2B2                 0.392   olfactory receptor, family 2, subfamily B, member 2 ...
OR5B2                 0.392   olfactory receptor, family 5, subfamily B, member 2 ...
OR2K2                 0.390   olfactory receptor, family 2, subfamily K, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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