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Search of human proteins with 5174717
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5174717 T-cell, immune regulator 1 isoform b [Homo sapiens]
(614 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5174717 T-cell, immune regulator 1 isoform b [Homo sapiens] 1232 0.0
gi|19924145 T-cell, immune regulator 1 isoform a [Homo sapiens] 1232 0.0
gi|42741679 ATPase, H+ transporting, lysosomal V0 subunit A2 [Ho... 652 0.0
gi|85386547 ATPase, H+ transporting, lysosomal V0 subunit a4 [Ho... 607 e-173
gi|85386056 ATPase, H+ transporting, lysosomal V0 subunit a4 [Ho... 607 e-173
gi|85386053 ATPase, H+ transporting, lysosomal V0 subunit a4 [Ho... 607 e-173
gi|194097403 ATPase, H+ transporting, lysosomal V0 subunit a1 is... 589 e-168
gi|19913418 ATPase, H+ transporting, lysosomal V0 subunit a1 iso... 588 e-168
gi|194097401 ATPase, H+ transporting, lysosomal V0 subunit a1 is... 588 e-168
gi|7661960 Rough Deal homolog, centromere/kinetochore protein [H... 31 3.8
gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens] 31 3.8
gi|46559747 hypothetical protein LOC399947 [Homo sapiens] 31 3.8
gi|130980075 centromere protein J [Homo sapiens] 30 5.0
gi|117414154 sodium channel associated protein 2 isoform b [Homo... 30 5.0
gi|117414162 sodium channel associated protein 2 isoform a [Homo... 30 5.0
gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens] 30 5.0
gi|13899255 membrane frizzled-related protein [Homo sapiens] 30 6.5
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 30 6.5
gi|7657345 mitochondrial carrier homolog 1 [Homo sapiens] 30 6.5
gi|7657326 male-enhanced antigen [Homo sapiens] 30 6.5
gi|149944680 HAUS augmin-like complex, subunit 5 [Homo sapiens] 30 8.5
gi|5453726 leucine rich repeat (in FLII) interacting protein 2 i... 30 8.5
gi|7705268 family with sequence similarity 8, member A1 [Homo sa... 30 8.5
gi|157042792 coiled-coil domain containing 64B [Homo sapiens] 30 8.5
>gi|5174717 T-cell, immune regulator 1 isoform b [Homo sapiens]
Length = 614
Score = 1232 bits (3187), Expect = 0.0
Identities = 614/614 (100%), Positives = 614/614 (100%)
Query: 1 MTFLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETER 60
MTFLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETER
Sbjct: 1 MTFLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETER 60
Query: 61 FLSQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEAL 120
FLSQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEAL
Sbjct: 61 FLSQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEAL 120
Query: 121 RDSSMEEGVSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 180
RDSSMEEGVSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF
Sbjct: 121 RDSSMEEGVSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 180
Query: 181 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 240
PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY
Sbjct: 181 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 240
Query: 241 TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLGPYPFGI 300
TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLGPYPFGI
Sbjct: 241 TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLGPYPFGI 300
Query: 301 DPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELTF 360
DPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELTF
Sbjct: 301 DPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELTF 360
Query: 361 LLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSNRLLYPRQEVVQATL 420
LLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSNRLLYPRQEVVQATL
Sbjct: 361 LLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSNRLLYPRQEVVQATL 420
Query: 421 VVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDASVNGWSSDEEKA 480
VVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDASVNGWSSDEEKA
Sbjct: 421 VVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDASVNGWSSDEEKA 480
Query: 481 GGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVM 540
GGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVM
Sbjct: 481 GGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVM 540
Query: 541 RIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGT 600
RIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGT
Sbjct: 541 RIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGT 600
Query: 601 GYKLSPFTFAATDD 614
GYKLSPFTFAATDD
Sbjct: 601 GYKLSPFTFAATDD 614
>gi|19924145 T-cell, immune regulator 1 isoform a [Homo sapiens]
Length = 830
Score = 1232 bits (3187), Expect = 0.0
Identities = 614/614 (100%), Positives = 614/614 (100%)
Query: 1 MTFLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETER 60
MTFLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETER
Sbjct: 217 MTFLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETER 276
Query: 61 FLSQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEAL 120
FLSQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEAL
Sbjct: 277 FLSQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEAL 336
Query: 121 RDSSMEEGVSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 180
RDSSMEEGVSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF
Sbjct: 337 RDSSMEEGVSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 396
Query: 181 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 240
PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY
Sbjct: 397 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 456
Query: 241 TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLGPYPFGI 300
TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLGPYPFGI
Sbjct: 457 TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLGPYPFGI 516
Query: 301 DPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELTF 360
DPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELTF
Sbjct: 517 DPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELTF 576
Query: 361 LLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSNRLLYPRQEVVQATL 420
LLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSNRLLYPRQEVVQATL
Sbjct: 577 LLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSNRLLYPRQEVVQATL 636
Query: 421 VVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDASVNGWSSDEEKA 480
VVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDASVNGWSSDEEKA
Sbjct: 637 VVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEENKAGLLDLPDASVNGWSSDEEKA 696
Query: 481 GGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVM 540
GGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVM
Sbjct: 697 GGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLWAMVM 756
Query: 541 RIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGT 600
RIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGT
Sbjct: 757 RIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGT 816
Query: 601 GYKLSPFTFAATDD 614
GYKLSPFTFAATDD
Sbjct: 817 GYKLSPFTFAATDD 830
>gi|42741679 ATPase, H+ transporting, lysosomal V0 subunit A2 [Homo
sapiens]
Length = 856
Score = 652 bits (1681), Expect = 0.0
Identities = 335/627 (53%), Positives = 431/627 (68%), Gaps = 27/627 (4%)
Query: 3 FLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETERFL 62
FLIS+WGEQIG K++KI DC+HCHV+P+ E R + L + Q+L VL +TE +L
Sbjct: 225 FLISFWGEQIGHKVKKICDCYHCHVYPYPNTAEERREIQEGLNTRIQDLYTVLHKTEDYL 284
Query: 63 SQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEALRD 122
QVL + + + +QV KMKA+Y LN CS T+KCLIAE WC DL L+ AL +
Sbjct: 285 RQVLCKAAESVYSRVIQVKKMKAIYHMLNMCSFDVTNKCLIAEVWCPEADLQDLRRALEE 344
Query: 123 SSMEEG--VSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 180
S E G + + + IP ++ PPT IRTN+FT FQ IVDAYGVG Y+EVNPA +TIITF
Sbjct: 345 GSRESGATIPSFMNIIPTKETPPTRIRTNKFTEGFQNIVDAYGVGSYREVNPALFTIITF 404
Query: 181 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 240
PFLFAVMFGD GHG +MFLFAL +VL EN P + +Q EI + FF GRY+LLLMGLFS+Y
Sbjct: 405 PFLFAVMFGDFGHGFVMFLFALLLVLNENHPRLNQSQ-EIMRMFFNGRYILLLMGLFSVY 463
Query: 241 TGFIYNECFSRATSIFPSGWSVAAMANQSG----------WSDAFLAQHTMLTLDPNVTG 290
TG IYN+CFS++ ++F SGW+V+AM + S W+D+ + +++L LDP++ G
Sbjct: 464 TGLIYNDCFSKSVNLFGSGWNVSAMYSSSHPPAEHKKMVLWNDSVVRHNSILQLDPSIPG 523
Query: 291 VFLGPYPFGIDPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRL 350
VF GPYP GIDPIW+LA N L+FLNSFKMKMSVILG++HM FGV+LG+FNH+HF ++ +
Sbjct: 524 VFRGPYPLGIDPIWNLATNRLTFLNSFKMKMSVILGIIHMTFGVILGIFNHLHFRKKFNI 583
Query: 351 LLETLPELTFLLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSNRLLY 410
L ++PEL F+L +FGYL+F++ YKWL A + APSILI FINMFLF S ++ LY
Sbjct: 584 YLVSIPELLFMLCIFGYLIFMIFYKWLVFSAETSRVAPSILIEFINMFLFPASKTSG-LY 642
Query: 411 PRQEVVQATLVVLALAMVPILLLGTPLHLLHRHR-------RRLRRRPADRQEENKAGLL 463
QE VQ L+V+ VP+L LG PL LL H R + E + LL
Sbjct: 643 TGQEYVQRVLLVVTALSVPVLFLGKPLFLLWLHNGRSCFGVNRSGYTLIRKDSEEEVSLL 702
Query: 464 DLPDASVNGWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWA 523
D + + G + E E+LM Q IH+IE+CLGC+SNTASYLRLWA
Sbjct: 703 GSQDIE----EGNHQVEDGCREMACEEFNFGEILMTQVIHSIEYCLGCISNTASYLRLWA 758
Query: 524 LSLAHAQLSEVLWAMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLH 583
LSLAHAQLS+VLWAM+MR+GL + GV ++L+P+ A FAV+T+ ILL+MEGLSAFLH
Sbjct: 759 LSLAHAQLSDVLWAMLMRVGLRVDTTYGV--LLLLPVIALFAVLTIFILLIMEGLSAFLH 816
Query: 584 ALRLHWVEFQNKFYSGTGYKLSPFTFA 610
A+RLHWVEFQNKFY G G K PF+F+
Sbjct: 817 AIRLHWVEFQNKFYVGAGTKFVPFSFS 843
>gi|85386547 ATPase, H+ transporting, lysosomal V0 subunit a4 [Homo
sapiens]
Length = 840
Score = 607 bits (1564), Expect = e-173
Identities = 325/613 (53%), Positives = 408/613 (66%), Gaps = 10/613 (1%)
Query: 3 FLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETERFL 62
F+I Y GEQ+ QKI+KI D F V+P + R L+ + + ++L V+ +TE
Sbjct: 222 FIIFYQGEQLRQKIKKICDGFRATVYPCPEPAVERREMLESVNVRLEDLITVITQTESHR 281
Query: 63 SQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEALRD 122
++L ++V KMKAVY LN C++ T +C+IAE W V D ++ AL
Sbjct: 282 QRLLQEAAANWHSWLIKVQKMKAVYHILNMCNIDVTQQCVIAEIWFPVADATRIKRALEQ 341
Query: 123 SSMEEGVSA--VAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 180
G S + + + PPT RTN+FTA FQ IVDAYGVG Y+E+NPAPYTIITF
Sbjct: 342 GMELSGSSMAPIMTTVQSKTAPPTFNRTNKFTAGFQNIVDAYGVGSYREINPAPYTIITF 401
Query: 181 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 240
PFLFAVMFGD GHG +M L AL M+L E R + NEIW TFF GRYL+LLMG+FSIY
Sbjct: 402 PFLFAVMFGDCGHGTVMLLAALWMILNERRLLSQKTDNEIWNTFFHGRYLILLMGIFSIY 461
Query: 241 TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLG-PYPFG 299
TG IYN+CFS++ +IF S WSV M W+ + + L LDP + GV+ G PYPFG
Sbjct: 462 TGLIYNDCFSKSLNIFGSSWSVQPMFRNGTWNTHVMEESLYLQLDPAIPGVYFGNPYPFG 521
Query: 300 IDPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELT 359
IDPIW+LA+N L+FLNS+KMKMSVILG+V M FGV+L +FNH++F + ++L+ +PE+
Sbjct: 522 IDPIWNLASNKLTFLNSYKMKMSVILGIVQMVFGVILSLFNHIYFRRTLNIILQFIPEMI 581
Query: 360 FLLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHS-PSNRLLYPRQEVVQA 418
F+L LFGYLVF++I+KW C + APSILIHFINMFLF++S SN LY Q+ VQ+
Sbjct: 582 FILCLFGYLVFMIIFKWCCFDVHVSQHAPSILIHFINMFLFNYSDSSNAPLYKHQQEVQS 641
Query: 419 TLVVLALAMVPILLLGTP--LHLLHRHRRRLRRRPADRQEENKAGLLDLPDASVNGWSSD 476
VV+AL VP +LL P L HR + R + EN G P +S +G +
Sbjct: 642 FFVVMALISVPWMLLIKPFILRASHRKSQLQASRIQEDATENIEGDSSSP-SSRSGQRTS 700
Query: 477 EEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLW 536
+ G LDD E E +V +HQAIHTIE+CLGC+SNTASYLRLWALSLAHAQLSEVLW
Sbjct: 701 ADTHGALDDHGE-EFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLW 759
Query: 537 AMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKF 596
MVM GL G+ V + IFA FAV+TVAILL+MEGLSAFLHALRLHWVEFQNKF
Sbjct: 760 TMVMNSGLQTRGWGGIVGVFI--IFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKF 817
Query: 597 YSGTGYKLSPFTF 609
Y G GYK SPF+F
Sbjct: 818 YVGDGYKFSPFSF 830
>gi|85386056 ATPase, H+ transporting, lysosomal V0 subunit a4 [Homo
sapiens]
Length = 840
Score = 607 bits (1564), Expect = e-173
Identities = 325/613 (53%), Positives = 408/613 (66%), Gaps = 10/613 (1%)
Query: 3 FLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETERFL 62
F+I Y GEQ+ QKI+KI D F V+P + R L+ + + ++L V+ +TE
Sbjct: 222 FIIFYQGEQLRQKIKKICDGFRATVYPCPEPAVERREMLESVNVRLEDLITVITQTESHR 281
Query: 63 SQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEALRD 122
++L ++V KMKAVY LN C++ T +C+IAE W V D ++ AL
Sbjct: 282 QRLLQEAAANWHSWLIKVQKMKAVYHILNMCNIDVTQQCVIAEIWFPVADATRIKRALEQ 341
Query: 123 SSMEEGVSA--VAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 180
G S + + + PPT RTN+FTA FQ IVDAYGVG Y+E+NPAPYTIITF
Sbjct: 342 GMELSGSSMAPIMTTVQSKTAPPTFNRTNKFTAGFQNIVDAYGVGSYREINPAPYTIITF 401
Query: 181 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 240
PFLFAVMFGD GHG +M L AL M+L E R + NEIW TFF GRYL+LLMG+FSIY
Sbjct: 402 PFLFAVMFGDCGHGTVMLLAALWMILNERRLLSQKTDNEIWNTFFHGRYLILLMGIFSIY 461
Query: 241 TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLG-PYPFG 299
TG IYN+CFS++ +IF S WSV M W+ + + L LDP + GV+ G PYPFG
Sbjct: 462 TGLIYNDCFSKSLNIFGSSWSVQPMFRNGTWNTHVMEESLYLQLDPAIPGVYFGNPYPFG 521
Query: 300 IDPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELT 359
IDPIW+LA+N L+FLNS+KMKMSVILG+V M FGV+L +FNH++F + ++L+ +PE+
Sbjct: 522 IDPIWNLASNKLTFLNSYKMKMSVILGIVQMVFGVILSLFNHIYFRRTLNIILQFIPEMI 581
Query: 360 FLLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHS-PSNRLLYPRQEVVQA 418
F+L LFGYLVF++I+KW C + APSILIHFINMFLF++S SN LY Q+ VQ+
Sbjct: 582 FILCLFGYLVFMIIFKWCCFDVHVSQHAPSILIHFINMFLFNYSDSSNAPLYKHQQEVQS 641
Query: 419 TLVVLALAMVPILLLGTP--LHLLHRHRRRLRRRPADRQEENKAGLLDLPDASVNGWSSD 476
VV+AL VP +LL P L HR + R + EN G P +S +G +
Sbjct: 642 FFVVMALISVPWMLLIKPFILRASHRKSQLQASRIQEDATENIEGDSSSP-SSRSGQRTS 700
Query: 477 EEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLW 536
+ G LDD E E +V +HQAIHTIE+CLGC+SNTASYLRLWALSLAHAQLSEVLW
Sbjct: 701 ADTHGALDDHGE-EFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLW 759
Query: 537 AMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKF 596
MVM GL G+ V + IFA FAV+TVAILL+MEGLSAFLHALRLHWVEFQNKF
Sbjct: 760 TMVMNSGLQTRGWGGIVGVFI--IFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKF 817
Query: 597 YSGTGYKLSPFTF 609
Y G GYK SPF+F
Sbjct: 818 YVGDGYKFSPFSF 830
>gi|85386053 ATPase, H+ transporting, lysosomal V0 subunit a4 [Homo
sapiens]
Length = 840
Score = 607 bits (1564), Expect = e-173
Identities = 325/613 (53%), Positives = 408/613 (66%), Gaps = 10/613 (1%)
Query: 3 FLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETERFL 62
F+I Y GEQ+ QKI+KI D F V+P + R L+ + + ++L V+ +TE
Sbjct: 222 FIIFYQGEQLRQKIKKICDGFRATVYPCPEPAVERREMLESVNVRLEDLITVITQTESHR 281
Query: 63 SQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEALRD 122
++L ++V KMKAVY LN C++ T +C+IAE W V D ++ AL
Sbjct: 282 QRLLQEAAANWHSWLIKVQKMKAVYHILNMCNIDVTQQCVIAEIWFPVADATRIKRALEQ 341
Query: 123 SSMEEGVSA--VAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 180
G S + + + PPT RTN+FTA FQ IVDAYGVG Y+E+NPAPYTIITF
Sbjct: 342 GMELSGSSMAPIMTTVQSKTAPPTFNRTNKFTAGFQNIVDAYGVGSYREINPAPYTIITF 401
Query: 181 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 240
PFLFAVMFGD GHG +M L AL M+L E R + NEIW TFF GRYL+LLMG+FSIY
Sbjct: 402 PFLFAVMFGDCGHGTVMLLAALWMILNERRLLSQKTDNEIWNTFFHGRYLILLMGIFSIY 461
Query: 241 TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLG-PYPFG 299
TG IYN+CFS++ +IF S WSV M W+ + + L LDP + GV+ G PYPFG
Sbjct: 462 TGLIYNDCFSKSLNIFGSSWSVQPMFRNGTWNTHVMEESLYLQLDPAIPGVYFGNPYPFG 521
Query: 300 IDPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELT 359
IDPIW+LA+N L+FLNS+KMKMSVILG+V M FGV+L +FNH++F + ++L+ +PE+
Sbjct: 522 IDPIWNLASNKLTFLNSYKMKMSVILGIVQMVFGVILSLFNHIYFRRTLNIILQFIPEMI 581
Query: 360 FLLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHS-PSNRLLYPRQEVVQA 418
F+L LFGYLVF++I+KW C + APSILIHFINMFLF++S SN LY Q+ VQ+
Sbjct: 582 FILCLFGYLVFMIIFKWCCFDVHVSQHAPSILIHFINMFLFNYSDSSNAPLYKHQQEVQS 641
Query: 419 TLVVLALAMVPILLLGTP--LHLLHRHRRRLRRRPADRQEENKAGLLDLPDASVNGWSSD 476
VV+AL VP +LL P L HR + R + EN G P +S +G +
Sbjct: 642 FFVVMALISVPWMLLIKPFILRASHRKSQLQASRIQEDATENIEGDSSSP-SSRSGQRTS 700
Query: 477 EEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVLW 536
+ G LDD E E +V +HQAIHTIE+CLGC+SNTASYLRLWALSLAHAQLSEVLW
Sbjct: 701 ADTHGALDDHGE-EFNFGDVFVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLW 759
Query: 537 AMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKF 596
MVM GL G+ V + IFA FAV+TVAILL+MEGLSAFLHALRLHWVEFQNKF
Sbjct: 760 TMVMNSGLQTRGWGGIVGVFI--IFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKF 817
Query: 597 YSGTGYKLSPFTF 609
Y G GYK SPF+F
Sbjct: 818 YVGDGYKFSPFSF 830
>gi|194097403 ATPase, H+ transporting, lysosomal V0 subunit a1
isoform b [Homo sapiens]
Length = 837
Score = 589 bits (1519), Expect = e-168
Identities = 310/618 (50%), Positives = 411/618 (66%), Gaps = 21/618 (3%)
Query: 3 FLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETERFL 62
F+I + G+Q+ +++KI + F ++P + + R + + +LQ VL +TE
Sbjct: 220 FIIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDDLQMVLNQTEDHR 279
Query: 63 SQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEALRD 122
+VL + + ++V KMKA+Y LN C++ T KCLIAE WC V DL ++Q ALR
Sbjct: 280 QRVLQAAAKNIRVWFIKVRKMKAIYHTLNLCNIDVTQKCLIAEVWCPVTDLDSIQFALRR 339
Query: 123 SSMEEG--VSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 180
+ G V ++ +R+ PPT +TN+FT FQ IVDAYG+G Y+E+NPAPYTIITF
Sbjct: 340 GTEHSGSTVPSILNRMQTNQTPPTYNKTNKFTYGFQNIVDAYGIGTYREINPAPYTIITF 399
Query: 181 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 240
PFLFAVMFGD GHG+LM LFA+ MVL E+R + +NE++ T F GRY++LLMG+FS+Y
Sbjct: 400 PFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKNENEMFSTVFSGRYIILLMGVFSMY 459
Query: 241 TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLGPYPFGI 300
TG IYN+CFS++ +IF S WSV M + W++ L + +L L+P + GVF GPYPFGI
Sbjct: 460 TGLIYNDCFSKSLNIFGSSWSVRPMFTYN-WTEETLRGNPVLQLNPALPGVFGGPYPFGI 518
Query: 301 DPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELTF 360
DPIW++A N L+FLNSFKMKMSVILG++HM FGV L +FNH++F + + +PE+ F
Sbjct: 519 DPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKPLNIYFGFIPEIIF 578
Query: 361 LLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSN-RLLYPRQEVVQAT 419
+ LFGYLV L+ YKW A + +APS+LIHFINMFLFS+ S +LY Q+ +Q
Sbjct: 579 MTSLFGYLVILIFYKWTAYDAHTSENAPSLLIHFINMFLFSYPESGYSMLYSGQKGIQCF 638
Query: 420 LVVLALAMVPILLLGTPLHLLHRHRRRLRR--------RPADRQEENKAGLLDLPDASVN 471
LVV+AL VP +LL PL L ++ RR R + E A ++ S +
Sbjct: 639 LVVVALLCVPWMLLFKPLVLRRQYLRRKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTH 698
Query: 472 GWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQL 531
+DE E+ + ++HQAIHTIE+CLGC+SNTASYLRLWALSLAHAQL
Sbjct: 699 SEDADE-------PSEDEVFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQL 751
Query: 532 SEVLWAMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVE 591
SEVLW MV+ IGL + G +VL F AFA +TVAILL+MEGLSAFLHALRLHWVE
Sbjct: 752 SEVLWTMVIHIGLSVKSLAG--GLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVE 809
Query: 592 FQNKFYSGTGYKLSPFTF 609
FQNKFYSGTG+K PF+F
Sbjct: 810 FQNKFYSGTGFKFLPFSF 827
>gi|19913418 ATPase, H+ transporting, lysosomal V0 subunit a1
isoform c [Homo sapiens]
Length = 831
Score = 588 bits (1517), Expect = e-168
Identities = 310/618 (50%), Positives = 410/618 (66%), Gaps = 27/618 (4%)
Query: 3 FLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETERFL 62
F+I + G+Q+ +++KI + F ++P + + R + + +LQ VL +TE
Sbjct: 220 FIIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDDLQMVLNQTEDHR 279
Query: 63 SQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEALRD 122
+VL + + ++V KMKA+Y LN C++ T KCLIAE WC V DL ++Q ALR
Sbjct: 280 QRVLQAAAKNIRVWFIKVRKMKAIYHTLNLCNIDVTQKCLIAEVWCPVTDLDSIQFALRR 339
Query: 123 SSMEEG--VSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 180
+ G V ++ +R+ PPT +TN+FT FQ IVDAYG+G Y+E+NPAPYTIITF
Sbjct: 340 GTEHSGSTVPSILNRMQTNQTPPTYNKTNKFTYGFQNIVDAYGIGTYREINPAPYTIITF 399
Query: 181 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 240
PFLFAVMFGD GHG+LM LFA+ MVL E+R + +NE++ T F GRY++LLMG+FS+Y
Sbjct: 400 PFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKNENEMFSTVFSGRYIILLMGVFSMY 459
Query: 241 TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLGPYPFGI 300
TG IYN+CFS++ +IF S WSV M + W++ L + +L L+P + GVF GPYPFGI
Sbjct: 460 TGLIYNDCFSKSLNIFGSSWSVRPMFTYN-WTEETLRGNPVLQLNPALPGVFGGPYPFGI 518
Query: 301 DPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELTF 360
DPIW++A N L+FLNSFKMKMSVILG++HM FGV L +FNH++F + + +PE+ F
Sbjct: 519 DPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKPLNIYFGFIPEIIF 578
Query: 361 LLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSN-RLLYPRQEVVQAT 419
+ LFGYLV L+ YKW A + +APS+LIHFINMFLFS+ S +LY Q+ +Q
Sbjct: 579 MTSLFGYLVILIFYKWTAYDAHTSENAPSLLIHFINMFLFSYPESGYSMLYSGQKGIQCF 638
Query: 420 LVVLALAMVPILLLGTPLHLLHRHRRRLRR--------RPADRQEENKAGLLDLPDASVN 471
LVV+AL VP +LL PL L ++ RR R + E A ++ S +
Sbjct: 639 LVVVALLCVPWMLLFKPLVLRRQYLRRKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTH 698
Query: 472 GWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQL 531
+DE G + ++HQAIHTIE+CLGC+SNTASYLRLWALSLAHAQL
Sbjct: 699 SEDADEFDFG-------------DTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQL 745
Query: 532 SEVLWAMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVE 591
SEVLW MV+ IGL + G +VL F AFA +TVAILL+MEGLSAFLHALRLHWVE
Sbjct: 746 SEVLWTMVIHIGLSVKSLAG--GLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVE 803
Query: 592 FQNKFYSGTGYKLSPFTF 609
FQNKFYSGTG+K PF+F
Sbjct: 804 FQNKFYSGTGFKFLPFSF 821
>gi|194097401 ATPase, H+ transporting, lysosomal V0 subunit a1
isoform a [Homo sapiens]
Length = 838
Score = 588 bits (1517), Expect = e-168
Identities = 310/618 (50%), Positives = 410/618 (66%), Gaps = 27/618 (4%)
Query: 3 FLISYWGEQIGQKIRKITDCFHCHVFPFLQQEEARLGALQQLQQQSQELQEVLGETERFL 62
F+I + G+Q+ +++KI + F ++P + + R + + +LQ VL +TE
Sbjct: 227 FIIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDDLQMVLNQTEDHR 286
Query: 63 SQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEALRD 122
+VL + + ++V KMKA+Y LN C++ T KCLIAE WC V DL ++Q ALR
Sbjct: 287 QRVLQAAAKNIRVWFIKVRKMKAIYHTLNLCNIDVTQKCLIAEVWCPVTDLDSIQFALRR 346
Query: 123 SSMEEG--VSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITF 180
+ G V ++ +R+ PPT +TN+FT FQ IVDAYG+G Y+E+NPAPYTIITF
Sbjct: 347 GTEHSGSTVPSILNRMQTNQTPPTYNKTNKFTYGFQNIVDAYGIGTYREINPAPYTIITF 406
Query: 181 PFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIY 240
PFLFAVMFGD GHG+LM LFA+ MVL E+R + +NE++ T F GRY++LLMG+FS+Y
Sbjct: 407 PFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKNENEMFSTVFSGRYIILLMGVFSMY 466
Query: 241 TGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTLDPNVTGVFLGPYPFGI 300
TG IYN+CFS++ +IF S WSV M + W++ L + +L L+P + GVF GPYPFGI
Sbjct: 467 TGLIYNDCFSKSLNIFGSSWSVRPMFTYN-WTEETLRGNPVLQLNPALPGVFGGPYPFGI 525
Query: 301 DPIWSLAANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELTF 360
DPIW++A N L+FLNSFKMKMSVILG++HM FGV L +FNH++F + + +PE+ F
Sbjct: 526 DPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKPLNIYFGFIPEIIF 585
Query: 361 LLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSN-RLLYPRQEVVQAT 419
+ LFGYLV L+ YKW A + +APS+LIHFINMFLFS+ S +LY Q+ +Q
Sbjct: 586 MTSLFGYLVILIFYKWTAYDAHTSENAPSLLIHFINMFLFSYPESGYSMLYSGQKGIQCF 645
Query: 420 LVVLALAMVPILLLGTPLHLLHRHRRRLRR--------RPADRQEENKAGLLDLPDASVN 471
LVV+AL VP +LL PL L ++ RR R + E A ++ S +
Sbjct: 646 LVVVALLCVPWMLLFKPLVLRRQYLRRKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTH 705
Query: 472 GWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQL 531
+DE G + ++HQAIHTIE+CLGC+SNTASYLRLWALSLAHAQL
Sbjct: 706 SEDADEFDFG-------------DTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQL 752
Query: 532 SEVLWAMVMRIGLGLGREVGVAAVVLVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVE 591
SEVLW MV+ IGL + G +VL F AFA +TVAILL+MEGLSAFLHALRLHWVE
Sbjct: 753 SEVLWTMVIHIGLSVKSLAG--GLVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVE 810
Query: 592 FQNKFYSGTGYKLSPFTF 609
FQNKFYSGTG+K PF+F
Sbjct: 811 FQNKFYSGTGFKFLPFSF 828
>gi|7661960 Rough Deal homolog, centromere/kinetochore protein [Homo
sapiens]
Length = 2209
Score = 30.8 bits (68), Expect = 3.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 236 LFSIYTGFIYNECFSRATSIFPSGWSVAAMANQSGWSDAFLAQHTMLTL 284
L +Y + N C S++TS+F + W AMA + SD L +L +
Sbjct: 755 LLLLYIEDLLNRCSSKSTSLFETAWEAKAMAVIACLSDTDLIFDAVLKI 803
>gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens]
Length = 439
Score = 30.8 bits (68), Expect = 3.8
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 15/79 (18%)
Query: 422 VLALAMVPILLLGTPLHLLHR-----HRRRLRRRPADRQEENKAGLLDLPDASVNGWS-- 474
++ ++ ++ LG +H L R RR LRRRP R +A LP GW
Sbjct: 84 IVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGPR----RAPRAHLPPPHA-GWPEP 138
Query: 475 ---SDEEKAGGLDDEEEAE 490
+EE GL +EEE E
Sbjct: 139 ADLGEEEPMLGLGEEEEEE 157
>gi|46559747 hypothetical protein LOC399947 [Homo sapiens]
Length = 197
Score = 30.8 bits (68), Expect = 3.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 418 ATLVVLALAMVPILLLGTPLHLLHRHRRRLRRRPADRQEE 457
+TLV++ L V L+ L H H+RR+++R R +E
Sbjct: 60 STLVLIVLVTVIFCLIVLSLSTFHIHKRRMKKRKMQRAQE 99
>gi|130980075 centromere protein J [Homo sapiens]
Length = 1338
Score = 30.4 bits (67), Expect = 5.0
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 32 QQEEARLGALQQLQ-QQSQELQEVLGETERFLSQVLGRV----LQLLPPGQVQVHK 82
Q +E + +QL+ QQ ++LQ ++ E E+ L+ V G+ L LLP Q Q H+
Sbjct: 148 QLKEVQQKKQEQLKRQQLEQLQRLMEEQEKLLTMVSGQCTLPGLSLLPDDQSQKHR 203
>gi|117414154 sodium channel associated protein 2 isoform b [Homo
sapiens]
Length = 939
Score = 30.4 bits (67), Expect = 5.0
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 21/91 (23%)
Query: 14 QKIRKITDCFHCHVFPFLQQEEARLGALQ------------QLQQQSQELQEVLGETERF 61
+ IRK+ DC LQ+++ + LQ QL ++S +L EVL + ER
Sbjct: 731 ETIRKLKDC--------LQEKDEHIKRLQEKITEIEKCTQEQLDEKSSQLDEVLEKLERH 782
Query: 62 LSQVLGRVLQLLPPGQVQVHKMKAVYLALNQ 92
++ ++ Q L +V++ +++ Y LN+
Sbjct: 783 -NERKEKLKQQLKGKEVELEEIRKAYSTLNR 812
>gi|117414162 sodium channel associated protein 2 isoform a [Homo
sapiens]
Length = 1032
Score = 30.4 bits (67), Expect = 5.0
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 21/91 (23%)
Query: 14 QKIRKITDCFHCHVFPFLQQEEARLGALQ------------QLQQQSQELQEVLGETERF 61
+ IRK+ DC LQ+++ + LQ QL ++S +L EVL + ER
Sbjct: 824 ETIRKLKDC--------LQEKDEHIKRLQEKITEIEKCTQEQLDEKSSQLDEVLEKLERH 875
Query: 62 LSQVLGRVLQLLPPGQVQVHKMKAVYLALNQ 92
++ ++ Q L +V++ +++ Y LN+
Sbjct: 876 -NERKEKLKQQLKGKEVELEEIRKAYSTLNR 905
>gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens]
Length = 894
Score = 30.4 bits (67), Expect = 5.0
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 444 RRRLRRRPADRQEENKAGLLDLPDASVNGWSSDEEKAGGLDDEEEAELVPSEV 496
RRR RR+ Q++ ++ +D S G S+EE A +DD+ +E SE+
Sbjct: 690 RRRKRRKSIFVQKKRRSSAVDFTAGS--GEESEEEDADAMDDDTASEETGSEL 740
>gi|13899255 membrane frizzled-related protein [Homo sapiens]
Length = 579
Score = 30.0 bits (66), Expect = 6.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 482 GLDDEEEAELVPSEVLMHQAIHTIEFCLGCVSNTASYLRLWALSLAHAQLSEVL 535
G DD L P L + + +E CLG NT ++ +W + ++ EVL
Sbjct: 449 GSDDNCSGPLFPPPELACEPVQ-VEMCLGLSYNTTAFPNIWVGMITQEEVVEVL 501
>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
sapiens]
Length = 631
Score = 30.0 bits (66), Expect = 6.5
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 11 QIGQKIRKITDCFHCHVFPFLQQEEARLGALQQL-----------QQQSQELQEVLGETE 59
Q+ K R+ + L++EE +L L QL QQ+ +ELQ+ + +
Sbjct: 443 QLEVKARRDEESVRIAQTRLLEEEEEKLKQLMQLKEEQERYIERAQQEKEELQQEMAQQS 502
Query: 60 RFLSQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTH 99
R L Q ++ ++ Q ++A L Q S + H
Sbjct: 503 RSLQQAQQQLEEVRQNRQRADEDVEAAQRKLRQASTNVKH 542
>gi|7657345 mitochondrial carrier homolog 1 [Homo sapiens]
Length = 372
Score = 30.0 bits (66), Expect = 6.5
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 358 LTFLLGLFGYLVFLVIYKWLCVWAARAASAPSILIHFINMFLFSHSPSNRLLYPRQEVVQ 417
L F +GL +L+ V++ W C ++L HFIN +L S S L R
Sbjct: 250 LGFFVGLIPHLLGDVVFLWGC----------NLLAHFINAYLVDDSFSQALAI-RSYTKF 298
Query: 418 ATLVVLALAMVPILLLG 434
+ +++ P LL+G
Sbjct: 299 VMGIAVSMLTYPFLLVG 315
>gi|7657326 male-enhanced antigen [Homo sapiens]
Length = 185
Score = 30.0 bits (66), Expect = 6.5
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 452 ADRQEENKAGLLDLPDASVNGWSSDEEKAGGLDDEEEAELVPSEVLMHQAIHTIEFCLGC 511
AD Q+ +A L LPD + DEE A L++ + P V ++ +
Sbjct: 94 ADIQDRIQALGLHLPDPPLESEDEDEEGATALNNHSSIPMDPEHV------ELVKRTMAG 147
Query: 512 VSNTASYLRLWALSLAHAQLSEVL 535
VS A + WA ++ AQ +V+
Sbjct: 148 VSLPAPGVPAWAREISDAQWEDVV 171
>gi|149944680 HAUS augmin-like complex, subunit 5 [Homo sapiens]
Length = 633
Score = 29.6 bits (65), Expect = 8.5
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 41 LQQLQQQSQELQEVLGETERFLSQVLGRVLQLLPPGQVQVHKMKAVYLALNQCSVSTTHK 100
L+ L QSQELQ+ G + L ++ + ++L Q+ + V L + S S T
Sbjct: 355 LKALHDQSQELQDAAGHRQLLLRELQAKQQRILHWRQLVEETQEQVRLLIKGNSASKTRL 414
Query: 101 C 101
C
Sbjct: 415 C 415
>gi|5453726 leucine rich repeat (in FLII) interacting protein 2
isoform 1 [Homo sapiens]
Length = 721
Score = 29.6 bits (65), Expect = 8.5
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 440 LHRHRRRLRRRPADRQEE----NKAGLLDLPDASVNGWSSDEEKAGGLD--DEEEAELVP 493
L R LR AD QE K GL+ +PD + NG S E AG + +E A+++
Sbjct: 500 LRNERDMLREELADLQETVKTGEKHGLVIIPDGTPNGDVSHEPVAGAITVVSQEAAQVLE 559
Query: 494 S 494
S
Sbjct: 560 S 560
>gi|7705268 family with sequence similarity 8, member A1 [Homo
sapiens]
Length = 413
Score = 29.6 bits (65), Expect = 8.5
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 308 ANHLSFLNSFKMKMSVILGVVHMAFGVVLGVFNHVHFGQRHRLLLETLPELTFLLGLFGY 367
A + F F +K +++L ++H++ G+ + F + ++E + E T + L
Sbjct: 252 AEMVDFFILFFIKATIVLSIMHLS-----GIKDISKFAMHY--IIEEIDEDTSMEDLQKM 304
Query: 368 LVFLVIYKWL-------CVWAARAASAPSILIHFINMFLFSH---SPSNRLLYPRQEVVQ 417
+V +IY+ L C+W A A+ L+ + + +PS L+ P V
Sbjct: 305 MVVALIYRLLVCFYEIICIWGAGGATPGKFLLGLRVVTCDTSVLIAPSRVLVIPSSNVSI 364
Query: 418 ATLVVLAL 425
T + AL
Sbjct: 365 TTSTIRAL 372
>gi|157042792 coiled-coil domain containing 64B [Homo sapiens]
Length = 508
Score = 29.6 bits (65), Expect = 8.5
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 445 RRLRRRPADRQEENKAGLLDLPDASVNGWSSDEEKAGGLDDEEEAE 490
RRL+RR ++ +EE++ L DA V+ S E A LDD ++ +
Sbjct: 270 RRLQRRVSELEEESR-----LQDADVSAASLQSELAHSLDDGDQGQ 310
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,110,602
Number of Sequences: 37866
Number of extensions: 952992
Number of successful extensions: 4550
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4498
Number of HSP's gapped (non-prelim): 26
length of query: 614
length of database: 18,247,518
effective HSP length: 108
effective length of query: 506
effective length of database: 14,157,990
effective search space: 7163942940
effective search space used: 7163942940
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.