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Search of human proteins with 5174467
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase
3B1 [Homo sapiens]
(390 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3... 803 0.0
gi|5174465 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3... 544 e-155
gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase... 446 e-125
gi|116089312 heparan sulfate (glucosamine) 3-O-sulfotransferase ... 436 e-122
gi|5174463 heparan sulfate D-glucosaminyl 3-O-sulfotransferase ... 434 e-122
gi|45267824 heparan sulfate (glucosamine) 3-O-sulfotransferase 5... 244 7e-65
gi|4826764 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1... 226 3e-59
gi|4758766 N-deacetylase/N-sulfotransferase (heparan glucosaminy... 128 1e-29
gi|12007650 heparan sulfate N-deacetylase/N-sulfotransferase 4 [... 124 2e-28
gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase... 122 4e-28
gi|4505351 N-deacetylase/N-sulfotransferase (heparan glucosaminy... 120 3e-27
gi|45505173 B cell RAG associated protein [Homo sapiens] 52 9e-07
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 42 0.001
gi|63025220 ring finger protein 215 [Homo sapiens] 40 0.004
gi|153792074 proline rich 12 [Homo sapiens] 40 0.004
gi|148276998 zinc finger protein 628 [Homo sapiens] 39 0.008
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 39 0.008
gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo sa... 39 0.010
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 37 0.023
gi|18079216 CASK interacting protein 1 [Homo sapiens] 37 0.031
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 37 0.040
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 36 0.068
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.068
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 36 0.068
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 36 0.068
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 36 0.068
gi|157168329 formin 1 [Homo sapiens] 35 0.089
gi|11386165 myeloid cell leukemia sequence 1 isoform 1 [Homo sap... 35 0.12
gi|33519458 myeloid cell leukemia sequence 1 isoform 2 [Homo sap... 35 0.12
gi|239582720 ATG9 autophagy related 9 homolog B [Homo sapiens] 35 0.12
>gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3B1
[Homo sapiens]
Length = 390
Score = 803 bits (2073), Expect = 0.0
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MGQRLSGGRSCLDVPGRLLPQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPG 60
MGQRLSGGRSCLDVPGRLLPQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPG
Sbjct: 1 MGQRLSGGRSCLDVPGRLLPQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPG 60
Query: 61 LLLLGSGSRAAHDPPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVPD 120
LLLLGSGSRAAHDPPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVPD
Sbjct: 61 LLLLGSGSRAAHDPPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVPD 120
Query: 121 SPSPISSFFSGSGSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKG 180
SPSPISSFFSGSGSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKG
Sbjct: 121 SPSPISSFFSGSGSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKG 180
Query: 181 LAWYRDLMPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQ 240
LAWYRDLMPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQ
Sbjct: 181 LAWYRDLMPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQ 240
Query: 241 TLSKRPDIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERL 300
TLSKRPDIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERL
Sbjct: 241 TLSKRPDIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERL 300
Query: 301 ISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEI 360
ISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEI
Sbjct: 301 ISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEI 360
Query: 361 DREVVRRLREFYRPFNLKFYQMTGHDFGWD 390
DREVVRRLREFYRPFNLKFYQMTGHDFGWD
Sbjct: 361 DREVVRRLREFYRPFNLKFYQMTGHDFGWD 390
>gi|5174465 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3A1
[Homo sapiens]
Length = 406
Score = 544 bits (1401), Expect = e-155
Identities = 291/385 (75%), Positives = 299/385 (77%), Gaps = 27/385 (7%)
Query: 31 RKLALLFAMLCVWLYMFLYSCAGSCAAAPGLL--LLGSGSRA--------AHDPPALATA 80
RK L+ L LY+F Y A C G + L G G A A P LA
Sbjct: 23 RKFLLMLCSLLTSLYVF-YCLAERCQTLSGPVVGLSGGGEEAGAPGGGVLAGGPRELAVW 81
Query: 81 PDGTP-------PRLPFRAPPATPLASGKEMAEGAASP--------EEQSPEVPDSPSPI 125
P P+ R PPA P G+E A SP V ++P
Sbjct: 82 PAAAQRKRLLQLPQWRRRRPPA-PRDDGEEAAWEEESPGLSGGPGGSGAGSTVAEAPPGT 140
Query: 126 SSFFSGSGSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKGLAWYR 185
+ GSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKGLAWYR
Sbjct: 141 LALLLDEGSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKGLAWYR 200
Query: 186 DLMPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKR 245
DLMPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKR
Sbjct: 201 DLMPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKR 260
Query: 246 PDIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPA 305
PDIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPA
Sbjct: 261 PDIPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPA 320
Query: 306 GELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVV 365
GELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVV
Sbjct: 321 GELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVV 380
Query: 366 RRLREFYRPFNLKFYQMTGHDFGWD 390
RRLREFYRPFNLKFYQMTGHDFGWD
Sbjct: 381 RRLREFYRPFNLKFYQMTGHDFGWD 405
>gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4
[Homo sapiens]
Length = 456
Score = 446 bits (1147), Expect = e-125
Identities = 240/443 (54%), Positives = 287/443 (64%), Gaps = 72/443 (16%)
Query: 20 PQPPPPPPPVR--------------RKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLG 65
P PPPPPPP+ RKL + + Y+ GS + L L
Sbjct: 8 PPPPPPPPPLAAPPPPGASAKGPPARKLLFMCTLSLSVTYLCYSLLGGSGSLQFPLALQE 67
Query: 66 SGSRAAHDPPA------------------------LATAPDGTPPRLPFR-APPAT---- 96
S AA PP+ L A G PP P + A P T
Sbjct: 68 SPGAAAEPPPSPPPPSLLPTPVRLGAPSQPPAPPPLDNASHGEPPEPPEQPAAPGTDGWG 127
Query: 97 ---------------PLASGKEMAEGAASPEEQSPEVPDSPSPISSFFSGSGS------- 134
PLA + + +A PE ++ E + ++ + +GS
Sbjct: 128 LPSGGGGAQDAWLRTPLAPSEMITAQSALPEREAQESSTTDEDLAGRRAANGSSERGGAV 187
Query: 135 -------KQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKGLAWYRDL 187
K+LPQA+IIGVKKGGTRALLE +RVHPDVRAVG EPHFFDR+Y+KGL WYR++
Sbjct: 188 STPDYGEKKLPQALIIGVKKGGTRALLEAIRVHPDVRAVGVEPHFFDRNYEKGLEWYRNV 247
Query: 188 MPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPD 247
MP+TLDGQITMEKTPSYFVT EAP RI +M+KD KLIVVVR+PVTRAISDYTQTLSK+P+
Sbjct: 248 MPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTRAISDYTQTLSKKPE 307
Query: 248 IPTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGE 307
IPTFE L FKNRT GLID SWSAI+IGIYA HLE+WL++FP+ Q+LFVSGERLI DPAGE
Sbjct: 308 IPTFEVLAFKNRTLGLIDASWSAIRIGIYALHLENWLQYFPLSQILFVSGERLIVDPAGE 367
Query: 308 LGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRR 367
+ +VQDFLGLKR++T+KHFYFNKTKGFPCLKK E SS P CLGK+KGRTHP ID +V+ R
Sbjct: 368 MAKVQDFLGLKRVVTEKHFYFNKTKGFPCLKKPEDSSAPRCLGKSKGRTHPRIDPDVIHR 427
Query: 368 LREFYRPFNLKFYQMTGHDFGWD 390
LR+FY+PFNL FYQMTG DF W+
Sbjct: 428 LRKFYKPFNLMFYQMTGQDFQWE 450
>gi|116089312 heparan sulfate (glucosamine) 3-O-sulfotransferase 6
[Homo sapiens]
Length = 311
Score = 436 bits (1121), Expect = e-122
Identities = 208/302 (68%), Positives = 246/302 (81%), Gaps = 7/302 (2%)
Query: 88 LPFRAPPATPLASGKEMAEGAASPEEQSPEVPDSPSPISSFFSGSGSKQLPQAIIIGVKK 147
LP R PPA + A +P E S V +P SG G ++ PQA+I+GVKK
Sbjct: 16 LPGRCPPAARAPAP------APAPSEPSSSVHRPGAPGLPLASGPGRRRFPQALIVGVKK 69
Query: 148 GGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKGLAWYRDLMPRTLDGQITMEKTPSYFVT 207
GGTRALLEFLR+HPDVRA+G+EPHFFDR Y++GLAWYR LMPRTLDGQITMEKTPSYFVT
Sbjct: 70 GGTRALLEFLRLHPDVRALGSEPHFFDRCYERGLAWYRSLMPRTLDGQITMEKTPSYFVT 129
Query: 208 REAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTAGLIDTS 267
REAP RI AMS DTKLIVVVR+PVTRAISDY QTLSK P +P+F +L F++ G +DT+
Sbjct: 130 REAPRRIHAMSPDTKLIVVVRNPVTRAISDYAQTLSKTPGLPSFRALAFRHGL-GPVDTA 188
Query: 268 WSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITDKHFY 327
WSA++IG+YA+HL+HWLR+FP+ LFVSGERL+SDPAGE+GRVQDFLGLKR++TDKHFY
Sbjct: 189 WSAVRIGLYAQHLDHWLRYFPLSHFLFVSGERLVSDPAGEVGRVQDFLGLKRVVTDKHFY 248
Query: 328 FNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLREFYRPFNLKFYQMTGHDF 387
FN TKGFPCLKKA+G SRP CLGK+KGR HP + + +VRRL+EFYRPFN +FYQMTG DF
Sbjct: 249 FNATKGFPCLKKAQGGSRPRCLGKSKGRPHPRVPQALVRRLQEFYRPFNRRFYQMTGQDF 308
Query: 388 GW 389
GW
Sbjct: 309 GW 310
>gi|5174463 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 2
[Homo sapiens]
Length = 367
Score = 434 bits (1115), Expect = e-122
Identities = 225/377 (59%), Positives = 274/377 (72%), Gaps = 16/377 (4%)
Query: 17 RLLPQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHDPPA 76
R+L + PP P R+L F + Y+ YS C LLG+ P
Sbjct: 4 RVLGRAGPPQPRRARRLLFAFTLSLSCTYL-CYSFLCCCDDLGRSRLLGA--------PR 54
Query: 77 LATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVPDSPSPISSFFSGS---G 133
P +L ++ P P SG +E +A P + VP +P S SGS G
Sbjct: 55 CLRGPSAGGQKLLQKSRPCDP--SGPTPSEPSA-PSAPAAAVP-APRLSGSNHSGSPKLG 110
Query: 134 SKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYDKGLAWYRDLMPRTLD 193
+K+LPQA+I+GVKKGGTRA+LEF+RVHPDVRA+G EPHFFDR+Y +GL WYR LMPRTL+
Sbjct: 111 TKRLPQALIVGVKKGGTRAVLEFIRVHPDVRALGTEPHFFDRNYGRGLDWYRSLMPRTLE 170
Query: 194 GQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFES 253
QIT+EKTPSYFVT+EAP RI MS+DTKLIVVVR+PVTRAISDYTQTLSK+PDIPTFE
Sbjct: 171 SQITLEKTPSYFVTQEAPRRIFNMSRDTKLIVVVRNPVTRAISDYTQTLSKKPDIPTFEG 230
Query: 254 LTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQD 313
L+F+NRT GL+D SW+AI+IG+Y HLE WL++FP+ Q+ FVSGERLI+DPAGE+GRVQD
Sbjct: 231 LSFRNRTLGLVDVSWNAIRIGMYVLHLESWLQYFPLAQIHFVSGERLITDPAGEMGRVQD 290
Query: 314 FLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLREFYR 373
FLG+KR ITDKHFYFNKTKGFPCLKK E S P CLGK+KGRTH +ID EV+ +LREFYR
Sbjct: 291 FLGIKRFITDKHFYFNKTKGFPCLKKTESSLLPRCLGKSKGRTHVQIDPEVIDQLREFYR 350
Query: 374 PFNLKFYQMTGHDFGWD 390
P+N+KFY+ G DF W+
Sbjct: 351 PYNIKFYETVGQDFRWE 367
>gi|45267824 heparan sulfate (glucosamine) 3-O-sulfotransferase 5
[Homo sapiens]
Length = 346
Score = 244 bits (624), Expect = 7e-65
Identities = 127/261 (48%), Positives = 167/261 (63%), Gaps = 9/261 (3%)
Query: 135 KQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDR--SYDKGLAWYRDLMPRTL 192
+QLP+AIIIGV+KGGTRALLE L +HP V E HFFD +Y KG+ WYR MP +
Sbjct: 88 QQLPKAIIIGVRKGGTRALLEMLNLHPAVVKASQEIHFFDNDENYGKGIEWYRKKMPFSY 147
Query: 193 DGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLS----KRPDI 248
QIT+EK+P+YF+T E P RI M+ KL+++VR+P TRAISDYTQ L K
Sbjct: 148 PQQITIEKSPAYFITEEVPERIYKMNSSIKLLIIVREPTTRAISDYTQVLEGKERKNKTY 207
Query: 249 PTFESLTFKNRTAGLIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGEL 308
FE L T ++T + A++ IY KHLE WL++FPI Q V G+RLI++P EL
Sbjct: 208 YKFEKLAIDPNTCE-VNTKYKAVRTSIYTKHLERWLKYFPIEQFHVVDGDRLITEPLPEL 266
Query: 309 GRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRL 368
V+ FL L I+ + YFN T+GF CL+ ++ CL +KGR HPE+D V+ +L
Sbjct: 267 QLVEKFLNLPPRISQYNLYFNATRGFYCLRFNIIFNK--CLAGSKGRIHPEVDPSVITKL 324
Query: 369 REFYRPFNLKFYQMTGHDFGW 389
R+F+ PFN KFYQ+TG W
Sbjct: 325 RKFFHPFNQKFYQITGRTLNW 345
>gi|4826764 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1
precursor [Homo sapiens]
Length = 307
Score = 226 bits (576), Expect = 3e-59
Identities = 121/303 (39%), Positives = 181/303 (59%), Gaps = 22/303 (7%)
Query: 94 PATPLASGK-EMAEGAASPEEQSPEVPDSPSPISSFFSGSGSKQLPQAIIIGVKKGGTRA 152
P+ P G+ E+ A + ++ +V D +P S ++QLPQ IIIGV+KGGTRA
Sbjct: 19 PSRPAELGQQELLRKAGTLQD---DVRDGVAPNGS------AQQLPQTIIIGVRKGGTRA 69
Query: 153 LLEFLRVHPDVRAVGAEPHFFD--RSYDKGLAWYRDLMPRTLDGQITMEKTPSYFVTREA 210
LLE L +HPDV A E HFFD Y GL WY MP + Q+T+EKTP+YF + +
Sbjct: 70 LLEMLSLHPDVAAAENEVHFFDWEEHYSHGLGWYLSQMPFSWPHQLTVEKTPAYFTSPKV 129
Query: 211 PARISAMSKDTKLIVVVRDPVTRAISDYTQT----LSKRPDIPTFESLTFKNRTAGLIDT 266
P R+ +M+ +L++++RDP R +SDYTQ + K P+ E ++ G ++
Sbjct: 130 PERVYSMNPSIRLLLILRDPSERVLSDYTQVFYNHMQKHKPYPSIEEFLVRD---GRLNV 186
Query: 267 SWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITDKHF 326
+ A+ +Y H+++WLR FP+R + V G+RLI DP E+ +V+ FL L I +F
Sbjct: 187 DYKALNRSLYHVHMQNWLRFFPLRHIHIVDGDRLIRDPFPEIQKVERFLKLSPQINASNF 246
Query: 327 YFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLREFYRPFNLKFYQMTGHD 386
YFNKTKGF CL+ S R CL ++KGR HP++D +++ +L E++ N KF+++ G
Sbjct: 247 YFNKTKGFYCLR---DSGRDRCLHESKGRAHPQVDPKLLNKLHEYFHEPNKKFFELVGRT 303
Query: 387 FGW 389
F W
Sbjct: 304 FDW 306
>gi|4758766 N-deacetylase/N-sulfotransferase (heparan glucosaminyl)
3 [Homo sapiens]
Length = 873
Score = 128 bits (321), Expect = 1e-29
Identities = 86/263 (32%), Positives = 135/263 (51%), Gaps = 19/263 (7%)
Query: 136 QLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEP------HFFDRS-YDKGLAWYRDL- 187
+LP+ ++IG +K GT AL FL +HP + + P FF+R+ Y +G+ WY D
Sbjct: 594 RLPKFLVIGPQKTGTTALYLFLVMHPSILSNSPSPKTFEEVQFFNRNNYHRGIDWYMDFF 653
Query: 188 -MPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRP 246
+P + EK+ +YF + EAP R +++ K+I ++ DP RA S Y S
Sbjct: 654 PVPSNVTTDFLFEKSANYFHSEEAPKRAASLVPKAKIITILIDPSDRAYSWYQHQRSHE- 712
Query: 247 DIPTFESLTFKNRTAG------LIDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERL 300
D + ++ +AG L + G YA H+E WL +FP Q+L + G++L
Sbjct: 713 DPAALKFSFYEVISAGPRAPSELRALQKRCLVPGWYASHIERWLVYFPPFQLLIIDGQQL 772
Query: 301 ISDPAGELGRVQDFLG-LKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPE 359
+DPA + VQ FLG L + F+ KGF C EG ++ CLGK+KGR +P
Sbjct: 773 RTDPATVMDEVQKFLGVLPHYNYSEALTFDSHKGFWCQLLEEGKTK--CLGKSKGRKYPP 830
Query: 360 IDREVVRRLREFYRPFNLKFYQM 382
+D + L +YR N++ ++
Sbjct: 831 MDSDSRTFLSSYYRDHNVELSKL 853
>gi|12007650 heparan sulfate N-deacetylase/N-sulfotransferase 4
[Homo sapiens]
Length = 872
Score = 124 bits (310), Expect = 2e-28
Identities = 83/261 (31%), Positives = 129/261 (49%), Gaps = 17/261 (6%)
Query: 137 LPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDR-------SYDKGLAWYRDLMP 189
LP+ ++IG +K GT AL FL +HP + + P F+ +Y KG+ WY D P
Sbjct: 594 LPKFLVIGPQKTGTTALYLFLLMHPSIISNLPSPKTFEEVQFFNGNNYHKGIDWYMDFFP 653
Query: 190 RTLD--GQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPD 247
+ EK+ +YF + EAP R +++ K+I ++ DP RA S Y S
Sbjct: 654 TPSNTTSDFLFEKSANYFHSEEAPRRAASLVPKAKIITILIDPSDRAYSWYQHQRSHEDP 713
Query: 248 IPT----FESLTFKNRTAGLIDTSWSAIQI-GIYAKHLEHWLRHFPIRQMLFVSGERLIS 302
+E ++ + + T + G YA H+E WL +F Q+L + G++L S
Sbjct: 714 AALRFNFYEVISTGHWAPSDLKTLQRRCLVPGWYAVHIERWLTYFATSQLLIIDGQQLRS 773
Query: 303 DPAGELGRVQDFLGL-KRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEID 361
DPA + VQ FLG+ R + F+ KGF C G ++ CLGK+KGR +P +D
Sbjct: 774 DPATVMDEVQKFLGVTPRYNYSEALTFDPQKGFWCQLLEGGKTK--CLGKSKGRKYPPMD 831
Query: 362 REVVRRLREFYRPFNLKFYQM 382
E L +YR N++ ++
Sbjct: 832 PESRTFLSNYYRDHNVELSKL 852
>gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase 2
[Homo sapiens]
Length = 883
Score = 122 bits (307), Expect = 4e-28
Identities = 89/312 (28%), Positives = 150/312 (48%), Gaps = 20/312 (6%)
Query: 87 RLPFRAPPATPLASGK-EMAEGAASPEEQSPEVPDSPSPISSFFSGSGSKQLPQAIIIGV 145
RL + P PLA E+ SP Q+P D + +LP+ +I+G
Sbjct: 554 RLRLQTLPPVPLAQKYFELFPQERSPLWQNP--CDDKRHKDIWSKEKTCDRLPKFLIVGP 611
Query: 146 KKGGTRALLEFLRVHPDVRAVGAEPHFFDR-------SYDKGLAWYRDL--MPRTLDGQI 196
+K GT A+ FL +HP V + P F+ +Y KG+ WY D +P
Sbjct: 612 QKTGTTAIHFFLSLHPAVTSSFPSPSTFEEIQFFNSPNYHKGIDWYMDFFPVPSNASTDF 671
Query: 197 TMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPT----FE 252
EK+ +YF + P R +A+ K+I V+ +P RA S Y + + ++
Sbjct: 672 LFEKSATYFDSEVVPRRGAALLPRAKIITVLTNPADRAYSWYQHQRAHGDPVALNYTFYQ 731
Query: 253 SLTFKNRTAGLIDTSWSAIQI-GIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRV 311
++ ++T + + + + G Y+ HL+ WL ++P Q+L V G+ L ++PA + +
Sbjct: 732 VISASSQTPLALRSLQNRCLVPGYYSTHLQRWLTYYPSGQLLIVDGQELRTNPAASMESI 791
Query: 312 QDFLGLKRIIT-DKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLRE 370
Q FLG+ + + F+ KGF C G +R CLG++KGR +P++D E L +
Sbjct: 792 QKFLGITPFLNYTRTLRFDDDKGFWCQGLEGGKTR--CLGRSKGRRYPDMDTESRLFLTD 849
Query: 371 FYRPFNLKFYQM 382
F+R NL+ ++
Sbjct: 850 FFRNHNLELSKL 861
>gi|4505351 N-deacetylase/N-sulfotransferase (heparan glucosaminyl)
1 [Homo sapiens]
Length = 882
Score = 120 bits (300), Expect = 3e-27
Identities = 83/264 (31%), Positives = 130/264 (49%), Gaps = 21/264 (7%)
Query: 136 QLPQAIIIGVKKGGTRALLEFLRVHPDVRA------VGAEPHFFD-RSYDKGLAWYRDL- 187
+ P+ +IIG +K GT AL FL +HPD+ + E FF+ +Y KG+ WY +
Sbjct: 603 RFPKLLIIGPQKTGTTALYLFLGMHPDLSSNYPSSETFEEIQFFNGHNYHKGIDWYMEFF 662
Query: 188 -MPRTLDGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRP 246
+P EK+ +YF + AP R +A+ K++ ++ +P RA S Y +
Sbjct: 663 PIPSNTTSDFYFEKSANYFDSEVAPRRAAALLPKAKVLTILINPADRAYSWYQH--QRAH 720
Query: 247 DIPTFESLTFKNRTAGLIDTSWSAIQI-------GIYAKHLEHWLRHFPIRQMLFVSGER 299
D P TF D S + G YA H+E WL + Q+L + G+
Sbjct: 721 DDPVALKYTFHEVITAGSDASSKLRALQNRCLVPGWYATHIERWLSAYHANQILVLDGKL 780
Query: 300 LISDPAGELGRVQDFLGLKRIIT-DKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHP 358
L ++PA + VQ FLG+ I K F+ KGF C G ++ CLGK+KGR +P
Sbjct: 781 LRTEPAKVMDMVQKFLGVTNTIDYHKTLAFDPKKGFWCQLLEGGKTK--CLGKSKGRKYP 838
Query: 359 EIDREVVRRLREFYRPFNLKFYQM 382
E+D + L+++YR N++ ++
Sbjct: 839 EMDLDSRAFLKDYYRDHNIELSKL 862
>gi|45505173 B cell RAG associated protein [Homo sapiens]
Length = 561
Score = 52.0 bits (123), Expect = 9e-07
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 37/197 (18%)
Query: 214 ISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTF-ESLT-----FKNRTAGLIDTS 267
I A + +LIV++RDPV R SDY S F E +T F+N ++D S
Sbjct: 378 IHAFQPNARLIVMLRDPVERLYSDYLYFASSNKSADDFHEKVTEALQLFEN---CMLDYS 434
Query: 268 WSA--------------IQIGIYAKHLEHWLRHFPIRQMLFVSGERLISDPAGELGRVQD 313
A +Q+G+YA +L WL F +Q L + E S+ + +V
Sbjct: 435 LRACVYNNTLNNAMPVRLQVGLYAVYLLDWLSVFDKQQFLILRLEDHASNVKYTMHKVFQ 494
Query: 314 FLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKTKGRTHPEIDREVVRRLREFYR 373
FL L + + K+ A + RP + G P I +++ LR+FYR
Sbjct: 495 FLNLGPLSEKQEALMTKS-------PASNARRPE--DRNLGPMWP-ITQKI---LRDFYR 541
Query: 374 PFNLKFYQMTGHD-FGW 389
PFN + Q+ + F W
Sbjct: 542 PFNARLAQVLADEAFAW 558
Score = 33.1 bits (74), Expect = 0.44
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 137 LPQAIIIGVKKGGTRALLEFLRVHPDVR-AVGAEPHFFDR 175
LP IIG K GT L + LR+HP+V+ + EPH++ R
Sbjct: 253 LPHFYIIGQPKCGTTDLYDRLRLHPEVKFSAIKEPHWWTR 292
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 41.6 bits (96), Expect = 0.001
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 70 AAHDPPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVPDSPSP 124
AA DPPA T P+ PP P +PP L + EG A PEE S + SP P
Sbjct: 1179 AATDPPAPRTPPE--PPGSPPSSPPPASLGRPEGEEEGPAEPEEHSVRICMSPGP 1231
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 40.0 bits (92), Expect = 0.004
Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 28/166 (16%)
Query: 19 LPQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGL-LLLGSGSRAAHD---- 73
L PPPPPPP L LL +L +WL AG AAA G G+G A
Sbjct: 9 LRSPPPPPPPPPSPLLLLLPLLPLWL-----GLAGPGAAADGSEPAAGAGRGGARAVRVD 63
Query: 74 ---PPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEV---------PDS 121
P A +G R+ A PA PL G+ + E+++P +
Sbjct: 64 VRLPRQDALVLEGV--RIGSEADPA-PLLGGRLLLMDIVDAEQEAPVEGWIAVAYVGKEQ 120
Query: 122 PSPISSFFSGSGSKQLPQAIIIGVKKG---GTRALLEFLRVHPDVR 164
+ GSG + P+A++ +++ G ALL + H VR
Sbjct: 121 AAQFHQENKGSGPQAYPKALVQQMRRALFLGASALLLLILNHNVVR 166
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 40.0 bits (92), Expect = 0.004
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 29/103 (28%)
Query: 20 PQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHDPPALAT 79
PQPPPPPPP + A P L + + ++ PP L
Sbjct: 1469 PQPPPPPPPPQ-------------------------PALPSPPPLVAPTPSSPPPPPLPP 1503
Query: 80 APDGTPPRLPFRAPPATPLASG-KEMAEGAASPEEQSPEVPDS 121
P PP +P PP P A+ E A+P + PE+PD+
Sbjct: 1504 PP---PPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDT 1543
Score = 30.4 bits (67), Expect = 2.9
Identities = 35/104 (33%), Positives = 40/104 (38%), Gaps = 16/104 (15%)
Query: 20 PQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHDPPA--- 76
PQPPPPPPP + L L L S G AAP L S DPP
Sbjct: 833 PQPPPPPPPPPPPMPL-------QLEAHLRS-HGLEPAAPSPRLRPEESL---DPPGAMQ 881
Query: 77 -LATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVP 119
L A + PP P P + GK+ A SP Q + P
Sbjct: 882 ELLGALEPLPP-APGDTGVGPPNSEGKDPAGAYRSPSPQGTKAP 924
Score = 30.0 bits (66), Expect = 3.7
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Query: 64 LGSGSRAAHDPPALA----TAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVP 119
+ S A DPP + PDG PP P A P P G A +PE E
Sbjct: 1398 ISSAISALDDPPLAGPKDTSTPDG-PPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEK 1456
Query: 120 DSPSP 124
P+P
Sbjct: 1457 PPPTP 1461
Score = 29.6 bits (65), Expect = 4.9
Identities = 31/111 (27%), Positives = 36/111 (32%), Gaps = 26/111 (23%)
Query: 16 GRLLPQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHDPP 75
G L + PPPPPP A S P LLL +G P
Sbjct: 757 GAFLQKSPPPPPPT----------------------AQSTQPTPHGLLLEAGGPDL--PL 792
Query: 76 ALATAPDGTPPRLPFRAPPATPLAS--GKEMAEGAASPEEQSPEVPDSPSP 124
L P P + AP +P AS G + E A P P P P
Sbjct: 793 VLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPP 843
Score = 29.6 bits (65), Expect = 4.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 15 PGRLLPQPPPPPPPVRRKLA 34
P +P PPPPPPP LA
Sbjct: 1505 PPPAMPSPPPPPPPAAAPLA 1524
Score = 28.9 bits (63), Expect = 8.3
Identities = 19/66 (28%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 63 LLGSGSRAAHDPPALATAPDGTPPRLPF----RAPPATPLASGKEMAEGAASPEEQSPEV 118
L + S +PP L P TPP P PP P +P SP
Sbjct: 1439 LPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPP 1498
Query: 119 PDSPSP 124
P P P
Sbjct: 1499 PPLPPP 1504
>gi|148276998 zinc finger protein 628 [Homo sapiens]
Length = 1055
Score = 38.9 bits (89), Expect = 0.008
Identities = 36/90 (40%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 20 PQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAG--SCAAAPGLLLLGS---GSRAAHDP 74
P PPPPPPPV +L L A V L +Y C G ++ LLL G AA P
Sbjct: 265 PAPPPPPPPVVPELFLAAAETTVEL---VYRCDGCEQGFSSEELLLEHQPCPGPDAAPQP 321
Query: 75 ---PALATAPDGTPPRLPFRAPPATPLASG 101
PA A D P LP PPA A G
Sbjct: 322 QEAPAEAPKADQPPSPLPQPPPPAAAPAPG 351
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.9 bits (89), Expect = 0.008
Identities = 33/114 (28%), Positives = 43/114 (37%), Gaps = 19/114 (16%)
Query: 20 PQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHD----PP 75
P PPPPP PV + A + +PG G ++ A PP
Sbjct: 131 PAPPPPPAPVAAAAPARAPRAA--------AAAATAPPSPGPAQPGPRAQRAAPLAAPPP 182
Query: 76 ALATAPDGTPPRLPFRAPPATPLASGKE-----MAEGAASPEEQSPEVPDSPSP 124
A A P PP P RAPP P + +E + A P++Q P P P
Sbjct: 183 APAAPPAVAPPAGPRRAPP--PAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPP 234
Score = 30.4 bits (67), Expect = 2.9
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 69 RAAHDPPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEE------QSPEVPDSP 122
R PPA AP G P APP TP AA+P + P SP
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSP 162
Query: 123 SP 124
P
Sbjct: 163 GP 164
>gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo
sapiens]
Length = 331
Score = 38.5 bits (88), Expect = 0.010
Identities = 39/132 (29%), Positives = 53/132 (40%), Gaps = 21/132 (15%)
Query: 3 QRLSGGRSCLDVPGRLLPQ------PPPPPPPVRRK-----LALLFAMLCVWLYMFLYSC 51
+RL G S VP R Q PPPPPP + + L+L ++ L L S
Sbjct: 81 ERLKAGASPRSVPARKKAQTAPPLQPPPPPPALSEELPWGDLSLNKCLVLASLVALLGSA 140
Query: 52 AGSCA-AAPGLLLLGSGSRAAHDPPALATAPDGTP-PRLPFRAPPATPLASGKEMAEGAA 109
C A PG L + PP+ A +P P+ +APP+ P A E
Sbjct: 141 FQLCRDAVPGEAALQARVPEPWVPPSSAPREPSSPLPKFEAQAPPSAPPAPRAE------ 194
Query: 110 SPEEQSPEVPDS 121
E P++P S
Sbjct: 195 --AEVRPKIPGS 204
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 37.4 bits (85), Expect = 0.023
Identities = 43/152 (28%), Positives = 54/152 (35%), Gaps = 37/152 (24%)
Query: 20 PQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHDPPALAT 79
P PPPPPP S G+ P ++ G P L
Sbjct: 312 PLPPPPPP----------------------SRGGNQLPRPPIVGGNKGRSGPLPPVPLGI 349
Query: 80 APDGTPPRLP-----FRAPPATPLASGKE-----MAEGAASPEEQSPEVPDSPSPISSFF 129
AP PR P PP P A+G+ GA P P P P P S
Sbjct: 350 APPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSG-- 407
Query: 130 SGSGSKQLPQAIII--GVKKGGTR-ALLEFLR 158
+G LP A++ G+ GG R ALL+ +R
Sbjct: 408 NGPAPPPLPPALVPAGGLAPGGGRGALLDQIR 439
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 37.0 bits (84), Expect = 0.031
Identities = 35/115 (30%), Positives = 41/115 (35%), Gaps = 33/115 (28%)
Query: 22 PPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHDPPALATAP 81
P PPPPP K A L +GS +P A PPA P
Sbjct: 1272 PKPPPPPTAPKPVKAVAGLP----------SGSAGPSPA-------PSPARQPPAALAKP 1314
Query: 82 DGTPPRL---PFRAP---------PATPLASGKEMAEGAASPEEQSPEVPDSPSP 124
GTPP L P + P PA P + A AA+P P P+ SP
Sbjct: 1315 PGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAP----PAPPEGASP 1365
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 36.6 bits (83), Expect = 0.040
Identities = 39/159 (24%), Positives = 52/159 (32%), Gaps = 38/159 (23%)
Query: 13 DVPGRLLPQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAH 72
+VP P PPPPPPP+ L + + PG L G+ A
Sbjct: 170 NVPAPPPPTPPPPPPPLPPPLPSSSPI------------KTPLVSPPGPLTKGNLPVVAP 217
Query: 73 DPPALATAPDGTPPRLPFRAPPATPLASGKEMAEGA------------------------ 108
P P PP P PPA+ L+ + A
Sbjct: 218 PVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKA 277
Query: 109 --ASPEEQSPEVPDSPSPISSFFSGSGSKQLPQAIIIGV 145
ASP + + E P P P+ + S S LP + GV
Sbjct: 278 EPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGV 316
Score = 30.4 bits (67), Expect = 2.9
Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 19/79 (24%)
Query: 52 AGSCAAAPGLLLLGSGSRAAHDPPALATAPDGTPPRLPFRA------PPATPLASGKEMA 105
AG A G G GSRA PRLP + PPA+P A
Sbjct: 112 AGQRDVAGGKTGQGPGSRAPS-------------PRLPNKTISGPLIPPASPRLGNTSEA 158
Query: 106 EGAASPEEQSPEVPDSPSP 124
GAA P VP P P
Sbjct: 159 HGAARTAPPRPNVPAPPPP 177
Score = 30.0 bits (66), Expect = 3.7
Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 31/130 (23%)
Query: 15 PGRLLPQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHDP 74
P + +PP PPPP+ Y+ A+ P L G S + P
Sbjct: 282 PAQDAQEPPAPPPPLPP-----------------YASCSPRASLPAPPLPGVNSSSETPP 324
Query: 75 PALATAPD-GTPPR------LPFRAPPATP-----LASGKEMAEGAASPEEQSPEVPDSP 122
P +P PP+ LP APPA P L + GA + P P +
Sbjct: 325 PLPPKSPSFQAPPQKAGAQALP--APPAPPGSQPFLQKKRHGRPGAGGGKLNPPPAPPAR 382
Query: 123 SPISSFFSGS 132
SP + S S
Sbjct: 383 SPTTELSSKS 392
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 35.8 bits (81), Expect = 0.068
Identities = 38/135 (28%), Positives = 48/135 (35%), Gaps = 28/135 (20%)
Query: 22 PPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHDPPALATA- 80
PPPPPP V +A L + C G L LGS PP A A
Sbjct: 716 PPPPPPQVTSAIATLQQAAA------MSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAA 769
Query: 81 ----------PDGTP--PRLPFRAP----PATPLAS----GKEMAEGAASPEEQSPEVP- 119
P G P PR P +P PA PLA + ++ + P +P
Sbjct: 770 ASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQPSLPH 829
Query: 120 DSPSPISSFFSGSGS 134
+P P +S S S
Sbjct: 830 GAPGPAASTRPASSS 844
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 35.8 bits (81), Expect = 0.068
Identities = 44/143 (30%), Positives = 53/143 (37%), Gaps = 21/143 (14%)
Query: 8 GRSCLDVPGRLLPQPPPPP---PPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLL 64
G L LP PP P PP + AL L S A+P L L
Sbjct: 370 GSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPL---------QAPPSPPASPPLSPL 420
Query: 65 GSGSRAAHDPPALAT----APDGTPPRLPFRAP---PATPLASGKEMAEGAASPEEQSPE 117
+ S A P ALA AP PP P +AP PA+P S A P +P
Sbjct: 421 ATPSPQA--PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 478
Query: 118 VPDSPSPISSFFSGSGSKQLPQA 140
+ PSP +S + PQA
Sbjct: 479 LQVPPSPPASPPMSPSATPPPQA 501
Score = 33.1 bits (74), Expect = 0.44
Identities = 37/124 (29%), Positives = 44/124 (35%), Gaps = 26/124 (20%)
Query: 15 PGRLLPQPP----PPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRA 70
PG L P+PP PPPP L +L A V G +G +
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGG----------IGGATIP 71
Query: 71 AHDPPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVPDSPSPISSFFS 130
P A T GT R P PP ASG+ E P SP P+SS
Sbjct: 72 ESAPRAGPTRSAGTSSRNPASRPP----ASGR--------GERAPPAKNTSPGPVSSPGR 119
Query: 131 GSGS 134
SG+
Sbjct: 120 ASGT 123
Score = 31.2 bits (69), Expect = 1.7
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 25/110 (22%)
Query: 20 PQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHDPPALAT 79
P PPP PPV+ +S S +P S + + PP+LA
Sbjct: 439 PFSPPPSPPVQAP----------------FSPPASPPVSP------SATPPSQAPPSLAA 476
Query: 80 APDGTPPRLPFRAPPATPLASGKEMAEG--AASPEEQSPEVPDSPSPISS 127
P PP P +PP +P A+ A AA P + + P +P +++
Sbjct: 477 PPLQVPPSPP-ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 525
Score = 30.0 bits (66), Expect = 3.7
Identities = 31/95 (32%), Positives = 38/95 (40%), Gaps = 27/95 (28%)
Query: 57 AAPGLLLLGSGSRAAHDPPALATAP----DGTPPRLPFRAP-------PATPLASGKEMA 105
AAP L L +A PPALAT P P P +AP P +PLA+ A
Sbjct: 506 AAPPLQLAKPPPQA---PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA 562
Query: 106 -------------EGAASPEEQSPEVPDSPSPISS 127
ASP Q+P P +P P +S
Sbjct: 563 PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTS 597
Score = 28.9 bits (63), Expect = 8.3
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 24/118 (20%)
Query: 22 PPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAP----GLLLLGSGSRAAHDPPAL 77
P PPPPP R + L L + S + P G G AA PP
Sbjct: 609 PGPPPPPSRSPSSTLSG-------PDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDA 661
Query: 78 ATA-------PDGTPPRLPFRAPPATPL----ASGKEMAEGAASPEEQSPEVPDSPSP 124
A G P L FR P PL A+G A+G + E E P+S +P
Sbjct: 662 ELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYE--TEGPESATP 717
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 35.8 bits (81), Expect = 0.068
Identities = 44/143 (30%), Positives = 53/143 (37%), Gaps = 21/143 (14%)
Query: 8 GRSCLDVPGRLLPQPPPPP---PPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLL 64
G L LP PP P PP + AL L S A+P L L
Sbjct: 331 GSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPL---------QAPPSPPASPPLSPL 381
Query: 65 GSGSRAAHDPPALAT----APDGTPPRLPFRAP---PATPLASGKEMAEGAASPEEQSPE 117
+ S A P ALA AP PP P +AP PA+P S A P +P
Sbjct: 382 ATPSPQA--PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 439
Query: 118 VPDSPSPISSFFSGSGSKQLPQA 140
+ PSP +S + PQA
Sbjct: 440 LQVPPSPPASPPMSPSATPPPQA 462
Score = 31.2 bits (69), Expect = 1.7
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 25/110 (22%)
Query: 20 PQPPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHDPPALAT 79
P PPP PPV+ +S S +P S + + PP+LA
Sbjct: 400 PFSPPPSPPVQAP----------------FSPPASPPVSP------SATPPSQAPPSLAA 437
Query: 80 APDGTPPRLPFRAPPATPLASGKEMAEG--AASPEEQSPEVPDSPSPISS 127
P PP P +PP +P A+ A AA P + + P +P +++
Sbjct: 438 PPLQVPPSPP-ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 486
Score = 30.0 bits (66), Expect = 3.7
Identities = 33/123 (26%), Positives = 41/123 (33%), Gaps = 33/123 (26%)
Query: 15 PGRLLPQPP---PPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAA 71
PG L P+PP PPPPV L +LG+
Sbjct: 22 PGLLTPRPPGSPRPPPPV---------------------------TPAALRVLGAAGAVG 54
Query: 72 HDPPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVPDSPSPISSFFSG 131
P A G +P AP A P + + A G E P SP P+SS
Sbjct: 55 RKPLAERAGGIG-GATIPESAPRAGPTRTSRPPASGRG--ERAPPAKNTSPGPVSSPGRA 111
Query: 132 SGS 134
SG+
Sbjct: 112 SGT 114
Score = 30.0 bits (66), Expect = 3.7
Identities = 31/95 (32%), Positives = 38/95 (40%), Gaps = 27/95 (28%)
Query: 57 AAPGLLLLGSGSRAAHDPPALATAP----DGTPPRLPFRAP-------PATPLASGKEMA 105
AAP L L +A PPALAT P P P +AP P +PLA+ A
Sbjct: 467 AAPPLQLAKPPPQA---PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA 523
Query: 106 -------------EGAASPEEQSPEVPDSPSPISS 127
ASP Q+P P +P P +S
Sbjct: 524 PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTS 558
Score = 28.9 bits (63), Expect = 8.3
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 24/118 (20%)
Query: 22 PPPPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAP----GLLLLGSGSRAAHDPPAL 77
P PPPPP R + L L + S + P G G AA PP
Sbjct: 570 PGPPPPPSRSPSSTLSG-------PDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDA 622
Query: 78 ATA-------PDGTPPRLPFRAPPATPL----ASGKEMAEGAASPEEQSPEVPDSPSP 124
A G P L FR P PL A+G A+G + E E P+S +P
Sbjct: 623 ELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYE--TEGPESATP 678
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 35.8 bits (81), Expect = 0.068
Identities = 25/59 (42%), Positives = 26/59 (44%), Gaps = 10/59 (16%)
Query: 74 PPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQS---------PEVPDSPS 123
PP P PP LP PP TP +E EG A P EQS EVP SPS
Sbjct: 1147 PPLPPEEPPTMPP-LPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTWPTEVPSSPS 1204
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 35.8 bits (81), Expect = 0.068
Identities = 25/59 (42%), Positives = 26/59 (44%), Gaps = 10/59 (16%)
Query: 74 PPALATAPDGTPPRLPFRAPPATPLASGKEMAEGAASPEEQS---------PEVPDSPS 123
PP P PP LP PP TP +E EG A P EQS EVP SPS
Sbjct: 1147 PPLPPEEPPTMPP-LPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTWPTEVPSSPS 1204
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 35.4 bits (80), Expect = 0.089
Identities = 37/131 (28%), Positives = 44/131 (33%), Gaps = 32/131 (24%)
Query: 17 RLLPQPP---PPPPPVRRKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSGSRAAHD 73
+ LP PP PPPPP L S GS + AP + + +G
Sbjct: 643 KALPPPPASIPPPPP-------------------LPSGLGSLSPAPPMPPVSAGPPLPPP 683
Query: 74 PPALATAPD----GTPPRLPFRAPPATPLASGKEMAEGAASPEEQSPEVPDSPSPISSFF 129
PP P G PP PP PL + P P P P FF
Sbjct: 684 PPPPPPLPPPSSAGPPP-----PPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGLFF 738
Query: 130 S-GSGSKQLPQ 139
GS S Q P+
Sbjct: 739 GLGSSSSQCPR 749
>gi|11386165 myeloid cell leukemia sequence 1 isoform 1 [Homo
sapiens]
Length = 350
Score = 35.0 bits (79), Expect = 0.12
Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 53 GSCAAAPGLLLLGSGSRAAHDPPALATAPD--GTPPRLPFRAPP--ATPLASGK-EMAEG 107
GS A+P L R A PP A PD TP RL F AP A PL + A+
Sbjct: 59 GSAGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADA 118
Query: 108 AASPEEQ 114
SPEE+
Sbjct: 119 IMSPEEE 125
>gi|33519458 myeloid cell leukemia sequence 1 isoform 2 [Homo
sapiens]
Length = 271
Score = 35.0 bits (79), Expect = 0.12
Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 53 GSCAAAPGLLLLGSGSRAAHDPPALATAPD--GTPPRLPFRAPP--ATPLASGK-EMAEG 107
GS A+P L R A PP A PD TP RL F AP A PL + A+
Sbjct: 59 GSAGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADA 118
Query: 108 AASPEEQ 114
SPEE+
Sbjct: 119 IMSPEEE 125
>gi|239582720 ATG9 autophagy related 9 homolog B [Homo sapiens]
Length = 924
Score = 35.0 bits (79), Expect = 0.12
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 9/116 (7%)
Query: 14 VPGRLLPQPPPPPPPVR----RKLALLFAMLCVWLYMFLYSCAGSCAAAPGLLLLGSG-S 68
VP +P PPPPPP R ++++ S + A P +L G+G S
Sbjct: 25 VPLLPMPLPPPPPPSCRGPGGGRISIFSLSPAPHTRSSPSSFSPPTAGPPCSVLQGTGAS 84
Query: 69 RAAHDP-PALATAPDGTPPRL-PFRAPPATPLASGKEMAEGAASPEEQSPEVPDSP 122
++ H P AT P P + P A P+ S +A +P +Q P+ DSP
Sbjct: 85 QSCHSALPIPATPPTQAQPAMTPASASPSWGSHSTPPLAPATPTPSQQCPQ--DSP 138
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,573,742
Number of Sequences: 37866
Number of extensions: 1041002
Number of successful extensions: 12608
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 259
Number of HSP's that attempted gapping in prelim test: 10322
Number of HSP's gapped (non-prelim): 2025
length of query: 390
length of database: 18,247,518
effective HSP length: 104
effective length of query: 286
effective length of database: 14,309,454
effective search space: 4092503844
effective search space used: 4092503844
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.