Guide to the Human Genome
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Name: NDST3 Sequence: fasta or formatted (873aa) NCBI GI: 4758766
Description:

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         36           2
 C cysteine            1.4         12           2
 D aspartate           5.3         46           2
 E glutamate           5.2         45           3
 F phenylalanine       6.2         54           2
 G glycine             5.5         48           2
 H histidine           4.0         35           2
 I isoleucine          6.3         55           3
 K lysine              6.9         60           2
 L leucine            10.8         94           2
 M methionine          2.2         19           1
 N asparagine          4.0         35           2
 P proline             5.6         49           2
 Q glutamine           4.1         36           2
 R arginine            4.0         35           2
 S serine              7.4         65           2
 T threonine           4.9         43           2
 V valine              5.5         48           2
 W tryptophan          1.9         17           2
 Y tyrosine            4.7         41           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-deacetylase/N-sulfotransferase (heparan glucosaminy... 
NDST4                 0.838   heparan sulfate N-deacetylase/N-sulfotransferase 4 [...
NDST1                 0.725   N-deacetylase/N-sulfotransferase (heparan glucosaminy...
NDST2                 0.677   heparan glucosaminyl N-deacetylase/N-sulfotransferase...
HS3ST4                0.059   heparan sulfate D-glucosaminyl 3-O-sulfotransferase...
HS3ST2                0.058   heparan sulfate D-glucosaminyl  3-O-sulfotransferase ...
HS3ST5                0.058   heparan sulfate (glucosamine) 3-O-sulfotransferase 5...
HS3ST3B1              0.058   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...
HS3ST3A1              0.058   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...
HS3ST1                0.058   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1...
HS3ST6                0.055   heparan sulfate (glucosamine) 3-O-sulfotransferase ...
CHST15                0.012   B cell RAG associated protein 
SULT1C3               0.005   sulfotransferase family, cytosolic, 1C, member 3 [Ho...
ABCC2                 0.004   ATP-binding cassette, sub-family C (CFTR/MRP), member...
SULT4A1               0.004   sulfotransferase family 4A, member 1 
DYNC1H1               0.004   cytoplasmic dynein 1 heavy chain 1 
LRRC2                 0.004   leucine rich repeat containing 2 
LRRC2                 0.004   leucine rich repeat containing 2 
ABCA2                 0.003   ATP-binding cassette, sub-family A, member 2 isoform...
ABCA2                 0.003   ATP-binding cassette, sub-family A, member 2 isoform...
CCDC144B              0.003   coiled-coil domain containing 144B 
SULT1A4               0.003   aryl sulfotransferase 
SULT1A4               0.003   aryl sulfotransferase 
SULT1A3               0.003   sulfotransferase family, cytosolic, 1A, phenol-prefe...
SULT1A3               0.003   sulfotransferase family, cytosolic, 1A, phenol-prefe...
LRRC8D                0.003   leucine rich repeat containing 8 family, member D [...
LRRC8D                0.003   leucine rich repeat containing 8 family, member D [H...
GRM1                  0.003   glutamate receptor, metabotropic 1 isoform beta pre...
GRM1                  0.003   glutamate receptor, metabotropic 1 isoform alpha pr...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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