Guide to the Human Genome
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Name: NDST1 Sequence: fasta or formatted (882aa) NCBI GI: 4505351
Description:

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         56           3
 C cysteine            1.4         12           1
 D aspartate           5.4         48           2
 E glutamate           5.0         44           2
 F phenylalanine       5.8         51           2
 G glycine             6.1         54           2
 H histidine           4.0         35           2
 I isoleucine          4.4         39           2
 K lysine              6.1         54           2
 L leucine            12.4        109           3
 M methionine          1.7         15           1
 N asparagine          4.0         35           2
 P proline             6.0         53           3
 Q glutamine           3.4         30           1
 R arginine            4.6         41           2
 S serine              5.9         52           2
 T threonine           5.2         46           2
 V valine              5.7         50           2
 W tryptophan          2.0         18           2
 Y tyrosine            4.5         40           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-deacetylase/N-sulfotransferase (heparan glucosaminy... 
NDST4                 0.719   heparan sulfate N-deacetylase/N-sulfotransferase 4 [...
NDST3                 0.716   N-deacetylase/N-sulfotransferase (heparan glucosaminy...
NDST2                 0.715   heparan glucosaminyl N-deacetylase/N-sulfotransferase...
HS3ST3B1              0.053   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...
HS3ST3A1              0.053   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...
HS3ST4                0.052   heparan sulfate D-glucosaminyl 3-O-sulfotransferase...
HS3ST2                0.051   heparan sulfate D-glucosaminyl  3-O-sulfotransferase ...
HS3ST6                0.051   heparan sulfate (glucosamine) 3-O-sulfotransferase ...
HS3ST5                0.050   heparan sulfate (glucosamine) 3-O-sulfotransferase 5...
HS3ST1                0.047   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1...
CHST15                0.008   B cell RAG associated protein 
SULT1C3               0.007   sulfotransferase family, cytosolic, 1C, member 3 [Ho...
SULT1A4               0.004   aryl sulfotransferase 
SULT1A4               0.004   aryl sulfotransferase 
SULT1A3               0.004   sulfotransferase family, cytosolic, 1A, phenol-prefe...
SULT1A3               0.004   sulfotransferase family, cytosolic, 1A, phenol-prefe...
EPOR                  0.004   erythropoietin receptor precursor 
KIAA2018              0.003   hypothetical protein LOC205717 
MLL2                  0.003   myeloid/lymphoid or mixed-lineage leukemia 2 
ADAM15                0.003   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.003   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.003   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.003   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.003   a disintegrin and metalloproteinase domain 15 isofor...
ACVR2A                0.003   activin A receptor, type IIA precursor 
PDS5B                 0.003   PDS5, regulator of cohesion maintenance, homolog B [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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