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Search of human proteins with 5031977
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5031977 nicotinamide phosphoribosyltransferase precursor
[Homo sapiens]
(491 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5031977 nicotinamide phosphoribosyltransferase precursor [Hom... 1002 0.0
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ... 36 0.070
gi|6754638 microtubule-associated protein tau isoform 2 [Homo sa... 36 0.070
gi|8400711 microtubule-associated protein tau isoform 3 [Homo sa... 36 0.070
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s... 36 0.070
gi|178557736 microtubule-associated protein tau isoform 5 [Homo ... 36 0.070
gi|189181742 atlastin GTPase 1 isoform b [Homo sapiens] 32 1.3
gi|74024917 atlastin GTPase 1 isoform b [Homo sapiens] 32 1.3
gi|19923445 atlastin GTPase 1 isoform a [Homo sapiens] 32 1.3
gi|189571674 cadherin-like 23 isoform 1 precursor [Homo sapiens] 32 1.7
gi|78191798 plasma kallikrein B1 precursor [Homo sapiens] 30 3.8
gi|11545859 golgi phosphoprotein 3 [Homo sapiens] 30 6.5
gi|197313638 N-methyl-D-aspartate receptor subunit 2A isoform 2 ... 30 6.5
gi|197313636 N-methyl-D-aspartate receptor subunit 2A isoform 1 ... 30 6.5
gi|4504125 N-methyl-D-aspartate receptor subunit 2A isoform 1 pr... 30 6.5
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 30 6.5
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 30 6.5
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 30 6.5
gi|166295204 hypothetical protein LOC80127 [Homo sapiens] 30 6.5
gi|6005772 G protein-coupled receptor 176 [Homo sapiens] 30 6.5
gi|5032281 dystrophin Dp427c isoform [Homo sapiens] 29 8.5
gi|5032307 dystrophin Dp140c isoform [Homo sapiens] 29 8.5
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens] 29 8.5
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens] 29 8.5
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens] 29 8.5
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens] 29 8.5
gi|5032313 dystrophin Dp140bc isoform [Homo sapiens] 29 8.5
gi|5032311 dystrophin Dp140ab isoform [Homo sapiens] 29 8.5
gi|5032309 dystrophin Dp140b isoform [Homo sapiens] 29 8.5
gi|5032293 dystrophin Dp140 isoform [Homo sapiens] 29 8.5
>gi|5031977 nicotinamide phosphoribosyltransferase precursor [Homo
sapiens]
Length = 491
Score = 1002 bits (2591), Expect = 0.0
Identities = 491/491 (100%), Positives = 491/491 (100%)
Query: 1 MNPAAEAEFNILLATDSYKVTHYKQYPPNTSKVYSYFECREKKTENSKLRKVKYEETVFY 60
MNPAAEAEFNILLATDSYKVTHYKQYPPNTSKVYSYFECREKKTENSKLRKVKYEETVFY
Sbjct: 1 MNPAAEAEFNILLATDSYKVTHYKQYPPNTSKVYSYFECREKKTENSKLRKVKYEETVFY 60
Query: 61 GLQYILNKYLKGKVVTKEKIQEAKDVYKEHFQDDVFNEKGWNYILEKYDGHLPIEIKAVP 120
GLQYILNKYLKGKVVTKEKIQEAKDVYKEHFQDDVFNEKGWNYILEKYDGHLPIEIKAVP
Sbjct: 61 GLQYILNKYLKGKVVTKEKIQEAKDVYKEHFQDDVFNEKGWNYILEKYDGHLPIEIKAVP 120
Query: 121 EGFVIPRGNVLFTVENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLETS 180
EGFVIPRGNVLFTVENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLETS
Sbjct: 121 EGFVIPRGNVLFTVENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLETS 180
Query: 181 GNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKGTDTVAGLALIKKYYGTKDPVPGY 240
GNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKGTDTVAGLALIKKYYGTKDPVPGY
Sbjct: 181 GNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKGTDTVAGLALIKKYYGTKDPVPGY 240
Query: 241 SVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIV 300
SVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIV
Sbjct: 241 SVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIV 300
Query: 301 SRSTQAPLIIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINT 360
SRSTQAPLIIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINT
Sbjct: 301 SRSTQAPLIIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINT 360
Query: 361 LQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVAD 420
LQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVAD
Sbjct: 361 LQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVAD 420
Query: 421 PNKRSKKGRLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSYSFDEIRKNA 480
PNKRSKKGRLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSYSFDEIRKNA
Sbjct: 421 PNKRSKKGRLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSYSFDEIRKNA 480
Query: 481 QLNIELEAAHH 491
QLNIELEAAHH
Sbjct: 481 QLNIELEAAHH 491
>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
sapiens]
Length = 776
Score = 36.2 bits (82), Expect = 0.070
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 365 VEGMKQKMWSIENIAFGSGGGLLQKLTR--DLLNCSFKCSYV-----VTNGLGINVFKDP 417
++ +K K+ S EN+ GGG +Q + + DL N KC V G + + P
Sbjct: 588 LKNVKSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIVYKP 647
Query: 418 VADPNKRSKKGRL-SLHRTPAGNFVTLEEGKGDLEE 452
V SK G L ++H P G V ++ K D ++
Sbjct: 648 VDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKD 683
>gi|6754638 microtubule-associated protein tau isoform 2 [Homo
sapiens]
Length = 441
Score = 36.2 bits (82), Expect = 0.070
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 365 VEGMKQKMWSIENIAFGSGGGLLQKLTR--DLLNCSFKCSYV-----VTNGLGINVFKDP 417
++ +K K+ S EN+ GGG +Q + + DL N KC V G + + P
Sbjct: 253 LKNVKSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIVYKP 312
Query: 418 VADPNKRSKKGRL-SLHRTPAGNFVTLEEGKGDLEE 452
V SK G L ++H P G V ++ K D ++
Sbjct: 313 VDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKD 348
>gi|8400711 microtubule-associated protein tau isoform 3 [Homo
sapiens]
Length = 383
Score = 36.2 bits (82), Expect = 0.070
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 365 VEGMKQKMWSIENIAFGSGGGLLQKLTR--DLLNCSFKCSYV-----VTNGLGINVFKDP 417
++ +K K+ S EN+ GGG +Q + + DL N KC V G + + P
Sbjct: 195 LKNVKSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIVYKP 254
Query: 418 VADPNKRSKKGRL-SLHRTPAGNFVTLEEGKGDLEE 452
V SK G L ++H P G V ++ K D ++
Sbjct: 255 VDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKD 290
>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
sapiens]
Length = 758
Score = 36.2 bits (82), Expect = 0.070
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 365 VEGMKQKMWSIENIAFGSGGGLLQKLTR--DLLNCSFKCSYV-----VTNGLGINVFKDP 417
++ +K K+ S EN+ GGG +Q + + DL N KC V G + + P
Sbjct: 570 LKNVKSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIVYKP 629
Query: 418 VADPNKRSKKGRL-SLHRTPAGNFVTLEEGKGDLEE 452
V SK G L ++H P G V ++ K D ++
Sbjct: 630 VDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKD 665
>gi|178557736 microtubule-associated protein tau isoform 5 [Homo
sapiens]
Length = 412
Score = 36.2 bits (82), Expect = 0.070
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 365 VEGMKQKMWSIENIAFGSGGGLLQKLTR--DLLNCSFKCSYV-----VTNGLGINVFKDP 417
++ +K K+ S EN+ GGG +Q + + DL N KC V G + + P
Sbjct: 224 LKNVKSKIGSTENLKHQPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGSVQIVYKP 283
Query: 418 VADPNKRSKKGRL-SLHRTPAGNFVTLEEGKGDLEE 452
V SK G L ++H P G V ++ K D ++
Sbjct: 284 VDLSKVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKD 319
>gi|189181742 atlastin GTPase 1 isoform b [Homo sapiens]
Length = 553
Score = 32.0 bits (71), Expect = 1.3
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 38/209 (18%)
Query: 96 FNEKGWNYILEKYDGHLPIEIKAVPEGFVIPRGNVLFTVENTDPECYWLTNWIETILVQS 155
F+EK + + E+ + P++ KA P +I + + F ++ T L+ E + +
Sbjct: 14 FSEKTYEWSSEEEE---PVK-KAGPVQVLIVKDDHSFELDETALNRILLS---EAVRDKE 66
Query: 156 WYPITVATNSREQKKILAKYLLETSGNLDGLEY------KLHDFGYRGVSSQETAGIGAS 209
++VA R+ K L ++L N + +++ L F +RG S +ET GI
Sbjct: 67 VVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIW 126
Query: 210 AHLVNFKGTDTVAGLALIKKYYGTKDPVPGYSVPAAEHSTITAWGKDHEKDAFEHIVTQF 269
+ + D L+ GT D + T F
Sbjct: 127 SEIFLINKPDGKKVAVLLMDTQGTFD----------------------SQSTLRDSATVF 164
Query: 270 SSVPVSVVSDSYDIYNACEKIWGEDLRHL 298
+ +S + S +YN + + +DL+HL
Sbjct: 165 A---LSTMISSIQVYNLSQNVQEDDLQHL 190
>gi|74024917 atlastin GTPase 1 isoform b [Homo sapiens]
Length = 553
Score = 32.0 bits (71), Expect = 1.3
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 38/209 (18%)
Query: 96 FNEKGWNYILEKYDGHLPIEIKAVPEGFVIPRGNVLFTVENTDPECYWLTNWIETILVQS 155
F+EK + + E+ + P++ KA P +I + + F ++ T L+ E + +
Sbjct: 14 FSEKTYEWSSEEEE---PVK-KAGPVQVLIVKDDHSFELDETALNRILLS---EAVRDKE 66
Query: 156 WYPITVATNSREQKKILAKYLLETSGNLDGLEY------KLHDFGYRGVSSQETAGIGAS 209
++VA R+ K L ++L N + +++ L F +RG S +ET GI
Sbjct: 67 VVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIW 126
Query: 210 AHLVNFKGTDTVAGLALIKKYYGTKDPVPGYSVPAAEHSTITAWGKDHEKDAFEHIVTQF 269
+ + D L+ GT D + T F
Sbjct: 127 SEIFLINKPDGKKVAVLLMDTQGTFD----------------------SQSTLRDSATVF 164
Query: 270 SSVPVSVVSDSYDIYNACEKIWGEDLRHL 298
+ +S + S +YN + + +DL+HL
Sbjct: 165 A---LSTMISSIQVYNLSQNVQEDDLQHL 190
>gi|19923445 atlastin GTPase 1 isoform a [Homo sapiens]
Length = 558
Score = 32.0 bits (71), Expect = 1.3
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 38/209 (18%)
Query: 96 FNEKGWNYILEKYDGHLPIEIKAVPEGFVIPRGNVLFTVENTDPECYWLTNWIETILVQS 155
F+EK + + E+ + P++ KA P +I + + F ++ T L+ E + +
Sbjct: 14 FSEKTYEWSSEEEE---PVK-KAGPVQVLIVKDDHSFELDETALNRILLS---EAVRDKE 66
Query: 156 WYPITVATNSREQKKILAKYLLETSGNLDGLEY------KLHDFGYRGVSSQETAGIGAS 209
++VA R+ K L ++L N + +++ L F +RG S +ET GI
Sbjct: 67 VVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIW 126
Query: 210 AHLVNFKGTDTVAGLALIKKYYGTKDPVPGYSVPAAEHSTITAWGKDHEKDAFEHIVTQF 269
+ + D L+ GT D + T F
Sbjct: 127 SEIFLINKPDGKKVAVLLMDTQGTFD----------------------SQSTLRDSATVF 164
Query: 270 SSVPVSVVSDSYDIYNACEKIWGEDLRHL 298
+ +S + S +YN + + +DL+HL
Sbjct: 165 A---LSTMISSIQVYNLSQNVQEDDLQHL 190
>gi|189571674 cadherin-like 23 isoform 1 precursor [Homo sapiens]
Length = 3354
Score = 31.6 bits (70), Expect = 1.7
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 163 TNSREQKKILAKYLLETSGNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKGTDTVA 222
T R++ IL +L+ + N +E FGY VS E G G + +V + TD
Sbjct: 1504 TPPRKKDHILQVTILDINDNPPVIE---SPFGYN-VSVNENVGGGTA--VVQVRATDRDI 1557
Query: 223 GLALIKKYY---GTKDPVPGYSVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSD 279
G+ + YY G KD + E +T A D E+ +F H+V +S
Sbjct: 1558 GINSVLSYYITEGNKDMAFRMDRISGEIATRPA-PPDRERQSFYHLVATVEDEGTPTLSA 1616
Query: 280 SYDIY 284
+ +Y
Sbjct: 1617 TTHVY 1621
>gi|78191798 plasma kallikrein B1 precursor [Homo sapiens]
Length = 638
Score = 30.4 bits (67), Expect = 3.8
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 16 DSYKVTHYKQYPPNTSKVYSYFECREKKTENSKLRKVKYEETVFYGLQY---ILNKYLKG 72
D YK + N SKV S EC+++ T N + + Y F+ +Y L KY G
Sbjct: 114 DIYKGVDMRGVNFNVSKVSSVEECQKRCTSNIRCQFFSYATQTFHKAEYRNNCLLKYSPG 173
Query: 73 KVVTKEKI 80
T K+
Sbjct: 174 GTPTAIKV 181
>gi|11545859 golgi phosphoprotein 3 [Homo sapiens]
Length = 298
Score = 29.6 bits (65), Expect = 6.5
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 126 PRGNVLFT-----VENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLE 178
P G+VL V+ T P + NWIE + ++W P+ + R ++ LAK L+E
Sbjct: 127 PTGDVLLDEALKHVKETQPP-ETVQNWIELLSGETWNPLKLHYQLRNVRERLAKNLVE 183
>gi|197313638 N-methyl-D-aspartate receptor subunit 2A isoform 2
precursor [Homo sapiens]
Length = 1281
Score = 29.6 bits (65), Expect = 6.5
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 414 FKDPVADPNKRSKKG--RLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSY 471
F DP DP++ +KG L ++R P N EEG + ++Y H K+ S
Sbjct: 1147 FPDPYQDPSENFRKGDSTLPMNRNPLHN----EEGLSNNDQYKLYSKHFTLKDKGSPHSE 1202
Query: 472 SFDEIRKNA 480
+ + R+N+
Sbjct: 1203 TSERYRQNS 1211
>gi|197313636 N-methyl-D-aspartate receptor subunit 2A isoform 1
precursor [Homo sapiens]
Length = 1464
Score = 29.6 bits (65), Expect = 6.5
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 414 FKDPVADPNKRSKKG--RLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSY 471
F DP DP++ +KG L ++R P N EEG + ++Y H K+ S
Sbjct: 1147 FPDPYQDPSENFRKGDSTLPMNRNPLHN----EEGLSNNDQYKLYSKHFTLKDKGSPHSE 1202
Query: 472 SFDEIRKNA 480
+ + R+N+
Sbjct: 1203 TSERYRQNS 1211
>gi|4504125 N-methyl-D-aspartate receptor subunit 2A isoform 1
precursor [Homo sapiens]
Length = 1464
Score = 29.6 bits (65), Expect = 6.5
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 414 FKDPVADPNKRSKKG--RLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSY 471
F DP DP++ +KG L ++R P N EEG + ++Y H K+ S
Sbjct: 1147 FPDPYQDPSENFRKGDSTLPMNRNPLHN----EEGLSNNDQYKLYSKHFTLKDKGSPHSE 1202
Query: 472 SFDEIRKNA 480
+ + R+N+
Sbjct: 1203 TSERYRQNS 1211
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
[Homo sapiens]
Length = 3321
Score = 29.6 bits (65), Expect = 6.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 336 ENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIEN 377
+NS GYK + YL+ +G +DIN Q V+ + Q + I +
Sbjct: 1462 KNSIGYKAIHEYLQKYKGFKIDINCKQLTVDFVNQSVLQISS 1503
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 29.6 bits (65), Expect = 6.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 336 ENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIEN 377
+NS GYK + YL+ +G +DIN Q V+ + Q + I +
Sbjct: 6867 KNSIGYKAIHEYLQKYKGFKIDINCKQLTVDFVNQSVLQISS 6908
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 29.6 bits (65), Expect = 6.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 336 ENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIEN 377
+NS GYK + YL+ +G +DIN Q V+ + Q + I +
Sbjct: 6938 KNSIGYKAIHEYLQKYKGFKIDINCKQLTVDFVNQSVLQISS 6979
>gi|166295204 hypothetical protein LOC80127 [Homo sapiens]
Length = 529
Score = 29.6 bits (65), Expect = 6.5
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 42 KKTENSKLRKVKYEETVFYGLQYI----------LNKYLKGKVVTKEKIQEAKDVYKEHF 91
K E+ K ++ K E+ + L Y+ + K + TKEK QE KD ++ +
Sbjct: 62 KSNEDLKKKQCKMEKDIMSVLSYLKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKY 121
Query: 92 QDDVFNEKGWNYILEKYDGHLPIEIKAV 119
+ +G + K G + E+KAV
Sbjct: 122 TRQINELEGQFHQKAKEIGMIHTELKAV 149
>gi|6005772 G protein-coupled receptor 176 [Homo sapiens]
Length = 515
Score = 29.6 bits (65), Expect = 6.5
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 270 SSVPVSVVSDSYDIY--NACEKIWGEDLRHLI 299
+SVPV V++ DIY + C ++W L HL+
Sbjct: 173 ASVPVFAVTNVADIYATSTCTEVWSNSLGHLV 204
>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 29.3 bits (64), Expect = 8.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 319 DTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENI 378
+T VL+ +K + E+SKG K L + +QG +I ++ + + I
Sbjct: 2701 ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG---EIEAHTDVYHNLDENSQKILRS 2757
Query: 379 AFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKR 424
GS +L L R L N +FK S + L I + +D KR
Sbjct: 2758 LEGSDDAVL--LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR 2801
>gi|5032307 dystrophin Dp140c isoform [Homo sapiens]
Length = 1105
Score = 29.3 bits (64), Expect = 8.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 319 DTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENI 378
+T VL+ +K + E+SKG K L + +QG +I ++ + + I
Sbjct: 249 ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG---EIEAHTDVYHNLDENSQKILRS 305
Query: 379 AFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKR 424
GS +L L R L N +FK S + L I + +D KR
Sbjct: 306 LEGSDDAVL--LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR 349
>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
Length = 2341
Score = 29.3 bits (64), Expect = 8.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 319 DTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENI 378
+T VL+ +K + E+SKG K L + +QG +I ++ + + I
Sbjct: 1365 ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG---EIEAHTDVYHNLDENSQKILRS 1421
Query: 379 AFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKR 424
GS +L L R L N +FK S + L I + +D KR
Sbjct: 1422 LEGSDDAVL--LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR 1465
>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
Length = 2344
Score = 29.3 bits (64), Expect = 8.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 319 DTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENI 378
+T VL+ +K + E+SKG K L + +QG +I ++ + + I
Sbjct: 1368 ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG---EIEAHTDVYHNLDENSQKILRS 1424
Query: 379 AFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKR 424
GS +L L R L N +FK S + L I + +D KR
Sbjct: 1425 LEGSDDAVL--LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR 1468
>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 29.3 bits (64), Expect = 8.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 319 DTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENI 378
+T VL+ +K + E+SKG K L + +QG +I ++ + + I
Sbjct: 2586 ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG---EIEAHTDVYHNLDENSQKILRS 2642
Query: 379 AFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKR 424
GS +L L R L N +FK S + L I + +D KR
Sbjct: 2643 LEGSDDAVL--LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR 2686
>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 29.3 bits (64), Expect = 8.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 319 DTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENI 378
+T VL+ +K + E+SKG K L + +QG +I ++ + + I
Sbjct: 2705 ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG---EIEAHTDVYHNLDENSQKILRS 2761
Query: 379 AFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKR 424
GS +L L R L N +FK S + L I + +D KR
Sbjct: 2762 LEGSDDAVL--LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR 2805
>gi|5032313 dystrophin Dp140bc isoform [Homo sapiens]
Length = 1133
Score = 29.3 bits (64), Expect = 8.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 319 DTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENI 378
+T VL+ +K + E+SKG K L + +QG +I ++ + + I
Sbjct: 249 ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG---EIEAHTDVYHNLDENSQKILRS 305
Query: 379 AFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKR 424
GS +L L R L N +FK S + L I + +D KR
Sbjct: 306 LEGSDDAVL--LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR 349
>gi|5032311 dystrophin Dp140ab isoform [Homo sapiens]
Length = 1230
Score = 29.3 bits (64), Expect = 8.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 319 DTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENI 378
+T VL+ +K + E+SKG K L + +QG +I ++ + + I
Sbjct: 249 ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG---EIEAHTDVYHNLDENSQKILRS 305
Query: 379 AFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKR 424
GS +L L R L N +FK S + L I + +D KR
Sbjct: 306 LEGSDDAVL--LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR 349
>gi|5032309 dystrophin Dp140b isoform [Homo sapiens]
Length = 1243
Score = 29.3 bits (64), Expect = 8.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 319 DTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENI 378
+T VL+ +K + E+SKG K L + +QG +I ++ + + I
Sbjct: 249 ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG---EIEAHTDVYHNLDENSQKILRS 305
Query: 379 AFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKR 424
GS +L L R L N +FK S + L I + +D KR
Sbjct: 306 LEGSDDAVL--LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR 349
>gi|5032293 dystrophin Dp140 isoform [Homo sapiens]
Length = 1225
Score = 29.3 bits (64), Expect = 8.5
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 319 DTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENI 378
+T VL+ +K + E+SKG K L + +QG +I ++ + + I
Sbjct: 249 ETTANVLQDATRKERLLEDSKGVKELMKQWQDLQG---EIEAHTDVYHNLDENSQKILRS 305
Query: 379 AFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPNKR 424
GS +L L R L N +FK S + L I + +D KR
Sbjct: 306 LEGSDDAVL--LQRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKR 349
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,111,220
Number of Sequences: 37866
Number of extensions: 874088
Number of successful extensions: 1998
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1978
Number of HSP's gapped (non-prelim): 55
length of query: 491
length of database: 18,247,518
effective HSP length: 106
effective length of query: 385
effective length of database: 14,233,722
effective search space: 5479982970
effective search space used: 5479982970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.