LDOC1L 31308

Name: LDOC1L	Sequence: fasta or formatted (239aa)		NCBI GI: 49355807
Description: leucine zipper, down-regulated in cancer 1-like		Referenced in: NF-kappaB Pathway DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.6 30 2 C cysteine 0.8 2 1 D aspartate 2.5 6 2 E glutamate 5.0 12 1 F phenylalanine 2.9 7 1 G glycine 4.6 11 1 H histidine 1.3 3 1 I isoleucine 3.3 8 1 K lysine 2.1 5 1 L leucine 10.5 25 2 M methionine 4.2 10 1 N asparagine 4.2 10 2 P proline 9.6 23 2 Q glutamine 4.6 11 1 R arginine 10.9 26 2 S serine 8.8 21 2 T threonine 7.9 19 2 V valine 2.9 7 1 W tryptophan 0.4 1 1 Y tyrosine 0.8 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine zipper, down-regulated in cancer 1-like [Hom... RGAG4 0.139 retrotransposon gag domain containing 4 FAM127B 0.123 family with sequence similarity 127, member B isofo... FAM127A 0.123 family with sequence similarity 127, member A [Homo... LOC100292719 0.121 PREDICTED: similar to Family with sequence similari... LDOC1 0.121 leucine zipper, down-regulated in cancer 1 FAM127C 0.121 family with sequence similarity 127, member C [Homo... PEG10 0.085 paternally expressed 10 isoform RF1 PEG10 0.085 paternally expressed 10 isoform RF1/2 C22orf29 0.076 hypothetical protein LOC79680 ZCCHC5 0.040 zinc finger, CCHC domain containing 5 RTL1 0.034 retrotransposon-like 1 RGAG1 0.034 retrotransposon gag domain containing 1 AMZ1 0.016 archaelysin family metallopeptidase 1 RUNX2 0.016 runt-related transcription factor 2 isoform a [Homo... RUNX2 0.016 runt-related transcription factor 2 isoform c MTMR2 0.016 myotubularin-related protein 2 isoform 1 MTMR2 0.016 myotubularin-related protein 2 isoform 2 MTMR2 0.016 myotubularin-related protein 2 isoform 2 ZCCHC16 0.013 zinc finger, CCHC domain containing 16 SRCAP 0.013 Snf2-related CBP activator protein CACNA1I 0.011 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1I 0.011 calcium channel, voltage-dependent, T type, alpha 1I... FAM127B 0.011 family with sequence similarity 127, member B isofo... MLXIPL 0.011 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.011 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.011 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.011 Williams Beuren syndrome chromosome region 14 isofor... RINL 0.011 Ras and Rab interactor-like MAPT 0.011 microtubule-associated protein tau isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.