Search of human proteins with 4885407

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
         (1203 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4885407 hyperpolarization activated cyclic nucleotide-gated p...  2429   0.0  
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...  1068   0.0  
gi|116325989 hyperpolarization activated cyclic nucleotide-gated...  1005   0.0  
gi|38327037 hyperpolarization activated cyclic nucleotide-gated ...   962   0.0  
gi|120433600 cyclic nucleotide gated channel alpha 3 isoform 2 [...   191   3e-48
gi|4502917 cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...   190   8e-48
gi|13540549 potassium voltage-gated channel, subfamily H, member...   186   2e-46
gi|27886653 potassium voltage-gated channel, subfamily H, member...   178   3e-44
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [...   175   2e-43
gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [H...   175   2e-43
gi|26051273 voltage-gated potassium channel, subfamily H, member...   174   3e-43
gi|4557729 voltage-gated potassium channel, subfamily H, member ...   174   3e-43
gi|4504831 potassium voltage-gated channel, subfamily H, member ...   173   8e-43
gi|42718011 cyclic nucleotide gated channel alpha 2 [Homo sapiens]    171   4e-42
gi|82617546 cyclic nucleotide gated channel alpha 4 [Homo sapiens]    170   7e-42
gi|22024390 potassium voltage-gated channel, subfamily H, member...   170   9e-42
gi|27886648 potassium voltage-gated channel, subfamily H, member...   170   9e-42
gi|27886651 potassium voltage-gated channel, subfamily H, member...   170   9e-42
gi|6912446 potassium voltage-gated channel, subfamily H, member ...   165   2e-40
gi|27437001 potassium voltage-gated channel, subfamily H, member...   165   3e-40
gi|27886667 potassium voltage-gated channel, subfamily H, member...   159   2e-38
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H...   156   1e-37
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re...   153   8e-37
gi|26051271 voltage-gated potassium channel, subfamily H, member...   152   2e-36
gi|27886646 potassium voltage-gated channel, subfamily H, member...   150   7e-36
gi|116642889 cyclic nucleotide gated channel beta 3 [Homo sapiens]    140   9e-33
gi|27886665 potassium voltage-gated channel, subfamily H, member...   136   1e-31
gi|163965366 nascent polypeptide-associated complex alpha subuni...    93   2e-18
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     86   3e-16
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    82   3e-15

>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
            potassium channel 4 [Homo sapiens]
          Length = 1203

 Score = 2429 bits (6295), Expect = 0.0
 Identities = 1203/1203 (100%), Positives = 1203/1203 (100%)

Query: 1    MDKLPPSMRKRLYSLPQQVGAKAWIMDEEEDAEEEGAGGRQDPSRRSIRLRPLPSPSPSA 60
            MDKLPPSMRKRLYSLPQQVGAKAWIMDEEEDAEEEGAGGRQDPSRRSIRLRPLPSPSPSA
Sbjct: 1    MDKLPPSMRKRLYSLPQQVGAKAWIMDEEEDAEEEGAGGRQDPSRRSIRLRPLPSPSPSA 60

Query: 61   AAGGTESRSSALGAADSEGPARGAGKSSTNGDCRRFRGSLASLGSRGGGSGGTGSGSSHG 120
            AAGGTESRSSALGAADSEGPARGAGKSSTNGDCRRFRGSLASLGSRGGGSGGTGSGSSHG
Sbjct: 61   AAGGTESRSSALGAADSEGPARGAGKSSTNGDCRRFRGSLASLGSRGGGSGGTGSGSSHG 120

Query: 121  HLHDSAEERRLIAEGDASPGEDRTPPGLAAEPERPGASAQPAASPPPPQQPPQPASASCE 180
            HLHDSAEERRLIAEGDASPGEDRTPPGLAAEPERPGASAQPAASPPPPQQPPQPASASCE
Sbjct: 121  HLHDSAEERRLIAEGDASPGEDRTPPGLAAEPERPGASAQPAASPPPPQQPPQPASASCE 180

Query: 181  QPSVDTAIKVEGGAAAGDQILPEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAV 240
            QPSVDTAIKVEGGAAAGDQILPEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAV
Sbjct: 181  QPSVDTAIKVEGGAAAGDQILPEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAV 240

Query: 241  EREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNV 300
            EREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNV
Sbjct: 241  EREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNV 300

Query: 301  VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVE 360
            VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVE
Sbjct: 301  VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVE 360

Query: 361  TRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN 420
            TRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN
Sbjct: 361  TRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN 420

Query: 421  LIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIG 480
            LIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIG
Sbjct: 421  LIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIG 480

Query: 481  YGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSF 540
            YGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSF
Sbjct: 481  YGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSF 540

Query: 541  HKLPPDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANAD 600
            HKLPPDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANAD
Sbjct: 541  HKLPPDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANAD 600

Query: 601  PNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGE 660
            PNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGE
Sbjct: 601  PNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGE 660

Query: 661  ICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSI 720
            ICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSI
Sbjct: 661  ICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSI 720

Query: 721  LLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHRVQAAASATPTPTPVIWTPLIQA 780
            LLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHRVQAAASATPTPTPVIWTPLIQA
Sbjct: 721  LLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHRVQAAASATPTPTPVIWTPLIQA 780

Query: 781  PLQAAAATTSVAIALTHHPRLPAAIFRPPPGSGLGNLGAGQTPRHLKRLQSLIPSALGSA 840
            PLQAAAATTSVAIALTHHPRLPAAIFRPPPGSGLGNLGAGQTPRHLKRLQSLIPSALGSA
Sbjct: 781  PLQAAAATTSVAIALTHHPRLPAAIFRPPPGSGLGNLGAGQTPRHLKRLQSLIPSALGSA 840

Query: 841  SPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSPPPGACGSPSAPTPSAGVA 900
            SPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSPPPGACGSPSAPTPSAGVA
Sbjct: 841  SPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSPPPGACGSPSAPTPSAGVA 900

Query: 901  ATTIAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGARGGLGLPEHFLP 960
            ATTIAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGARGGLGLPEHFLP
Sbjct: 901  ATTIAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGARGGLGLPEHFLP 960

Query: 961  PPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFT 1020
            PPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFT
Sbjct: 961  PPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFT 1020

Query: 1021 PRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLT 1080
            PRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLT
Sbjct: 1021 PRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLT 1080

Query: 1081 QDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGR 1140
            QDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGR
Sbjct: 1081 QDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGR 1140

Query: 1141 PYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTAGPQREPGARPEPVRSKLP 1200
            PYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTAGPQREPGARPEPVRSKLP
Sbjct: 1141 PYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTAGPQREPGARPEPVRSKLP 1200

Query: 1201 SNL 1203
            SNL
Sbjct: 1201 SNL 1203


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 1068 bits (2762), Expect = 0.0
 Identities = 598/933 (64%), Positives = 651/933 (69%), Gaps = 99/933 (10%)

Query: 52  PLPSPSPSAAAGGTESRSSALG--AADSEGPARGAGKSSTNGDCRRFRGSLASLGSRGGG 109
           P P P P  A      R+ AL   AAD  GP                RG L S  S  G 
Sbjct: 41  PAPPPGPGPAPPQHPPRAEALPPEAADEGGP----------------RGRLRSRDSSCGR 84

Query: 110 SGGTGSGSSHGHLHDSAEERRLIAEGDASPGEDRTPPGLAAEPERPGASAQPAASPPPPQ 169
            G  G+ S+           +    G+   GE +  P   A PE P    + + S     
Sbjct: 85  PGTPGAAST----------AKGSPNGECGRGEPQCSP---AGPEGPARGPKVSFSCRGAA 131

Query: 170 QPPQPASASCEQPSVDTAIKVEGGAAAGDQILPEAEVRLGQAGFMQRQFGAMLQPGVNKF 229
             P P     E+             A  ++  P  E R  QA FMQRQFGA+LQPGVNKF
Sbjct: 132 SGPAPGPGPAEE-------------AGSEEAGPAGEPRGSQASFMQRQFGALLQPGVNKF 178

Query: 230 SLRMFGSQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKD 289
           SLRMFGSQKAVEREQERVKSAG WIIHPYSDFRFYWD TMLL MVGNLIIIPVGITFFKD
Sbjct: 179 SLRMFGSQKAVEREQERVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKD 238

Query: 290 ENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISS 349
           E T PWIVFNVVSDTFFL+DLVLNFRTGIV+EDNTEIILDP++IK KYL++WF+VDF+SS
Sbjct: 239 ETTAPWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLRTWFVVDFVSS 298

Query: 350 IPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTY 409
           IPVDYIFLIVE  IDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTY
Sbjct: 299 IPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTY 358

Query: 410 DLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYAL 469
           DLASAV+RI NLI MMLLLCHWDGCLQFLVPMLQDFP +CWVSIN MVN+SW + YS+AL
Sbjct: 359 DLASAVMRICNLISMMLLLCHWDGCLQFLVPMLQDFPRNCWVSINGMVNHSWSELYSFAL 418

Query: 470 FKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQE 529
           FKAMSHMLCIGYGRQAP  M+D+WLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQE
Sbjct: 419 FKAMSHMLCIGYGRQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQE 478

Query: 530 KYKQVEQYMSFHKLPPDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKL 589
           KYKQVEQYMSFHKLP D RQ+IHDYYEHRYQGKMFDE+SILGEL+ PLREEI+NFNCRKL
Sbjct: 479 KYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEDSILGELNGPLREEIVNFNCRKL 538

Query: 590 VASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKE 649
           VASMPLFANADPNFVT+MLTKL+FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKE
Sbjct: 539 VASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKE 598

Query: 650 TKLADGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALD 709
            KL+DGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVA+D
Sbjct: 599 MKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAID 658

Query: 710 RLDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHRVQAAASATPTP 769
           RLDRIGKKNSILLHKVQHDLNSGVFN QEN IIQ+IV++DREM   A   Q      P P
Sbjct: 659 RLDRIGKKNSILLHKVQHDLNSGVFNNQENAIIQEIVKYDREMVQQAELGQRVGLFPPPP 718

Query: 770 TPVIWTPLIQAPLQAAAATTSVAIALTHHPRL----PAAIFRPPPGSGLGNLGAGQTPRH 825
            P   T  I    QAAA +    +A      L    P  + RPPPG        G  P  
Sbjct: 719 PPPQVTSAIATLQQAAAMSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAAASPGPPP-- 776

Query: 826 LKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSS--SSSPP 883
                         ASP  +P+    P +S +      G  A     P LP+   S +  
Sbjct: 777 -------------PASPPGAPASPRAPRTSPY-----GGLPAAPLAGPALPARRLSRASR 818

Query: 884 PGACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQPSP 943
           P +   PS P  + G AA+T               +SS +P L P  P AR   AA PSP
Sbjct: 819 PLSASQPSLPHGAPGPAAST-------------RPASSSTPRLGP-TPAAR---AAAPSP 861

Query: 944 -----APPGARGGLGLPEHFLPPPPSSRSPSSS 971
                A PGA GG       L P  S+RS  SS
Sbjct: 862 DRRDSASPGAAGG-------LDPQDSARSRLSS 887



 Score = 47.4 bits (111), Expect = 8e-05
 Identities = 46/139 (33%), Positives = 56/139 (40%), Gaps = 25/139 (17%)

Query: 924  PLLTPLQPGA-RSPQAAQPSPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPPGEL 982
            PL+ PL  G+ R  +   P PAP  A  G        PPPP+S  P  +P     P    
Sbjct: 745  PLVGPLALGSPRLVRRPPPGPAPAAASPG--------PPPPAS--PPGAPASPRAPRTSP 794

Query: 983  SLGLATGPLSTPETP---------PRQPEPPSLVAGASGGASPV----GFTPRGGLSPPG 1029
              GL   PL+ P  P         P     PSL  GA G A+        TPR G +P  
Sbjct: 795  YGGLPAAPLAGPALPARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAA 854

Query: 1030 HSPGP-PRTFPSAPPRASG 1047
             +  P P    SA P A+G
Sbjct: 855  RAAAPSPDRRDSASPGAAG 873



 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 55/192 (28%), Positives = 77/192 (40%), Gaps = 27/192 (14%)

Query: 952  LGLPEHFLPPPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGAS 1011
            LG      PPPP              PP +++  +AT   +   +   Q   P LV   +
Sbjct: 707  LGQRVGLFPPPP--------------PPPQVTSAIATLQQAAAMSFCPQVARP-LVGPLA 751

Query: 1012 GGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGT 1071
             G+  +   P  G +P   SPGPP   P++PP A  S  +    P +SP           
Sbjct: 752  LGSPRLVRRPPPGPAPAAASPGPPP--PASPPGAPASPRA----PRTSPYGGLPAAPLAG 805

Query: 1072 PPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSS-----GESMAAFPLFPRAG-GG 1125
            P L   RL++  + +SASQP+LP           P SS     G + AA    P      
Sbjct: 806  PALPARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPDRRD 865

Query: 1126 SGGSGSSGGLGP 1137
            S   G++GGL P
Sbjct: 866  SASPGAAGGLDP 877



 Score = 41.2 bits (95), Expect = 0.006
 Identities = 66/263 (25%), Positives = 81/263 (30%), Gaps = 80/263 (30%)

Query: 913  ALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGARGGLGLPEHFLPPPPSSRSPSSSP 972
            A GG     +SP  TP  PG   P    P PAPP  +          PPPP   +P   P
Sbjct: 3    ARGGGGRPGESPGATPA-PGPPPP----PPPAPPQQQ----------PPPPPPPAPPPGP 47

Query: 973  GQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSP 1032
            G                  + P+ PPR    P   A   G        PRG L     S 
Sbjct: 48   GP-----------------APPQHPPRAEALPPEAADEGG--------PRGRLRSRDSSC 82

Query: 1033 GPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPA 1092
            G P T P A   A GS              P     RG P  +P            + P 
Sbjct: 83   GRPGT-PGAASTAKGS--------------PNGECGRGEPQCSP------------AGPE 115

Query: 1093 LPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGRPYGAIPGQHVTL 1152
             P  G +        +SG         P  G G      S   GP G P G+      + 
Sbjct: 116  GPARGPKVSFSCRGAASG---------PAPGPGPAEEAGSEEAGPAGEPRGS----QASF 162

Query: 1153 PRKTSSGSLPPPLSLFGARATSS 1175
             ++     L P ++ F  R   S
Sbjct: 163  MQRQFGALLQPGVNKFSLRMFGS 185



 Score = 37.4 bits (85), Expect = 0.087
 Identities = 52/176 (29%), Positives = 60/176 (34%), Gaps = 33/176 (18%)

Query: 1022 RGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQ 1081
            RGG   PG SPG     P  PP                PPPP  PQ++  PP  P     
Sbjct: 4    RGGGGRPGESPGATPA-PGPPP----------------PPPPAPPQQQPPPPPPPAPPPG 46

Query: 1082 DLKLISASQP---ALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGS--GSSGGLG 1136
                     P   ALP + A          S +S    P  P A   + GS  G  G   
Sbjct: 47   PGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDSSCGRPGTPGAASTAKGSPNGECGRGE 106

Query: 1137 P---PGRPYGAIPGQHVTLP-RKTSSGSLPPPLSLFGARATSSGGPPLTAGPQREP 1188
            P   P  P G   G  V+   R  +SG  P P       A  +G     AGP  EP
Sbjct: 107  PQCSPAGPEGPARGPKVSFSCRGAASGPAPGP-----GPAEEAGSE--EAGPAGEP 155



 Score = 37.4 bits (85), Expect = 0.087
 Identities = 47/153 (30%), Positives = 55/153 (35%), Gaps = 26/153 (16%)

Query: 1053 LLPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGES 1112
            L PP   PPPPQV     T       L Q   +    Q A P  G   L   SP      
Sbjct: 713  LFPPP--PPPPQVTSAIAT-------LQQAAAMSFCPQVARPLVGPLAL--GSPR----- 756

Query: 1113 MAAFPLFPRAGGGSGGSGSSGGLGPPGRPYGAIPGQHVTLPRKTSSGSLPP-PLS--LFG 1169
                 L  R   G   + +S G  PP  P GA        PR +  G LP  PL+     
Sbjct: 757  -----LVRRPPPGPAPAAASPGPPPPASPPGAPASPRA--PRTSPYGGLPAAPLAGPALP 809

Query: 1170 ARATSSGGPPLTAGPQREPGARPEPVRSKLPSN 1202
            AR  S    PL+A     P   P P  S  P++
Sbjct: 810  ARRLSRASRPLSASQPSLPHGAPGPAASTRPAS 842



 Score = 33.9 bits (76), Expect = 0.96
 Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 135 GDASPGED--RTPPGLAAEPERPGASAQPAASPPPPQQPPQPASASCEQPSVDTAIKVEG 192
           G   PGE    TP      P  P    Q    PPPP  PP P  A  + P    A+  E 
Sbjct: 6   GGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEA 65

Query: 193 GAAAG 197
               G
Sbjct: 66  ADEGG 70


>gi|116325989 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 1 [Homo sapiens]
          Length = 890

 Score = 1005 bits (2599), Expect = 0.0
 Identities = 554/901 (61%), Positives = 627/901 (69%), Gaps = 82/901 (9%)

Query: 135 GDASPGEDRTPPGLAAEPERPGAS-AQPAASPPPPQQPPQPASASCEQPSVDTAIKVEGG 193
           G  +   +    G +  P +  A+ A PAA+      PP    A  ++       KV+GG
Sbjct: 5   GKPNSSSNSRDDGNSVFPAKASATGAGPAAAEKRLGTPPGGGGAGAKEHGNSVCFKVDGG 64

Query: 194 AAAGDQI---------LPEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQ 244
              G              +AE    Q GFMQRQF +MLQPGVNKFSLRMFGSQKAVE+EQ
Sbjct: 65  GGGGGGGGGGEEPAGGFEDAEGPRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQ 124

Query: 245 ERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDT 304
           ERVK+AGFWIIHPYSDFRFYWDL ML++MVGNL+IIPVGITFF ++ TTPWI+FNV SDT
Sbjct: 125 ERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQTTTPWIIFNVASDT 184

Query: 305 FFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVETRID 364
            FL+DL++NFRTG V ED++EIILDP+ IKM YLKSWF+VDFISSIPVDYIFLIVE  +D
Sbjct: 185 VFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSWFVVDFISSIPVDYIFLIVEKGMD 244

Query: 365 SEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGM 424
           SEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRI NLIGM
Sbjct: 245 SEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGM 304

Query: 425 MLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIGYGRQ 484
           MLLLCHWDGCLQFLVP+LQDFP DCWVS+N MVN+SWGKQYSYALFKAMSHMLCIGYG Q
Sbjct: 305 MLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIGYGAQ 364

Query: 485 APVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLP 544
           APV MSD+W+TMLSMIVGATCYAMF+GHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLP
Sbjct: 365 APVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLP 424

Query: 545 PDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANADPNFV 604
            D RQ+IHDYYEHRYQGK+FDEE+IL EL++PLREEI+NFNCRKLVA+MPLFANADPNFV
Sbjct: 425 ADMRQKIHDYYEHRYQGKIFDEENILNELNDPLREEIVNFNCRKLVATMPLFANADPNFV 484

Query: 605 TSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLL 664
           T+ML+KLRFEVFQPGDYIIREG +GKKMYFIQHGV  V+TK +KE KL DGSYFGEICLL
Sbjct: 485 TAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLL 544

Query: 665 TRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLHK 724
           T+GRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVA+DRLDRIGKKNSILL K
Sbjct: 545 TKGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLQK 604

Query: 725 VQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHRVQAAASATPTPTPVIWTPLIQAPLQA 784
            Q DLN+GVFN QENEI++QIV+HDREM      +      T   T    TP  +   Q+
Sbjct: 605 FQKDLNTGVFNNQENEILKQIVKHDREMVQAIAPINYPQMTTLNSTSSTTTPTSRMRTQS 664

Query: 785 AAATTSVAIALTHHPRLPAAIFRPPPGSGLGNLGAGQTPRHLKRLQSLIPSALGSASPAS 844
               T  A +L+H     + +  P P +        QTP+    L     +    + P  
Sbjct: 665 PPVYT--ATSLSH-----SNLHSPSPST--------QTPQPSAILSPCSYTTAVCSPPVQ 709

Query: 845 SPSQVDT-----PSSSSFHI-----QQLAGFSAPAGLSPLLPSSSSSPPPGACGSP---- 890
           SP    T     P++S   +     QQ    S P    P  P    SP P   GS     
Sbjct: 710 SPLAARTFHYASPTASQLSLMQQQPQQQVQQSQPPQTQPQQP----SPQPQTPGSSTPKN 765

Query: 891 ---------------------SAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSPLL--- 926
                                SA  PS     +T+      H  +G SL+S   P+    
Sbjct: 766 EVHKSTQALHNTNLTREVRPLSASQPSLPHEVSTL--ISRPHPTVGESLASIPQPVTAVP 823

Query: 927 -TPLQPGARS--PQAA-----QPSPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQP 978
            T LQ G RS  PQ         S A P  R   G+P    PPPP++  P  S   L   
Sbjct: 824 GTGLQAGGRSTVPQRVTLFRQMSSGAIPPNR---GVPP--APPPPAAALPRESSSVLNTD 878

Query: 979 P 979
           P
Sbjct: 879 P 879



 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 78/265 (29%), Positives = 112/265 (42%), Gaps = 50/265 (18%)

Query: 964  SSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRG 1023
            SS +  +S  +   PP   +  L+   L +P    + P+P +++       SP  +T   
Sbjct: 651  SSTTTPTSRMRTQSPPVYTATSLSHSNLHSPSPSTQTPQPSAIL-------SPCSYTT-A 702

Query: 1024 GLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPAS---SPPPPQVPQRRGTPPLTPG--- 1077
              SPP  SP   RTF  A P AS        P      S PP   PQ+    P TPG   
Sbjct: 703  VCSPPVQSPLAARTFHYASPTASQLSLMQQQPQQQVQQSQPPQTQPQQPSPQPQTPGSST 762

Query: 1078 ---------------RLTQDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRA 1122
                            LT++++ +SASQP+LP + +  + R  P + GES+A+ P    A
Sbjct: 763  PKNEVHKSTQALHNTNLTREVRPLSASQPSLPHEVSTLISRPHP-TVGESLASIPQPVTA 821

Query: 1123 GGGSGGSGSSGGLGPPGRPYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTA 1182
              G+       GL   GR    +P Q VTL R+ SSG++PP       R      PP  A
Sbjct: 822  VPGT-------GLQAGGR--STVP-QRVTLFRQMSSGAIPP------NRGVPPAPPPPAA 865

Query: 1183 GPQREPGA----RPEPVRSKLPSNL 1203
               RE  +     P+  + +  SNL
Sbjct: 866  ALPRESSSVLNTDPDAEKPRFASNL 890


>gi|38327037 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 3 [Homo sapiens]
          Length = 774

 Score =  962 bits (2487), Expect = 0.0
 Identities = 520/814 (63%), Positives = 592/814 (72%), Gaps = 61/814 (7%)

Query: 142 DRTPPGLAAEPERPGASAQPAASPPPPQQPPQPASASCEQPSVDTAIKVEGGAAAGDQIL 201
           ++ P   A+E   PG  A P  +PPP      P   S  +P                   
Sbjct: 4   EQRPAAGASEGATPGLEAVPPVAPPPATAASGPIPKSGPEPK------------------ 45

Query: 202 PEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGFWIIHPYSDF 261
                        +R  G +LQP VNKFSLR+FGS KAVE EQERVKSAG WIIHPYSDF
Sbjct: 46  -------------RRHLGTLLQPTVNKFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDF 92

Query: 262 RFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVE 321
           RFYWDL MLLLMVGNLI++PVGITFFK+EN+ PWIVFNV+SDTFFL+DLVLNFRTGIVVE
Sbjct: 93  RFYWDLIMLLLMVGNLIVLPVGITFFKEENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVE 152

Query: 322 DNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVET--RIDSEVYKTARALRIVRF 379
           +  EI+L P+ I+ +YL++WF+VD ISSIPVDYIFL+VE   R+D+EVYKTARALRIVRF
Sbjct: 153 EGAEILLAPRAIRTRYLRTWFLVDLISSIPVDYIFLVVELEPRLDAEVYKTARALRIVRF 212

Query: 380 TKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLV 439
           TKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRI NLIGMMLLLCHWDGCLQFLV
Sbjct: 213 TKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLV 272

Query: 440 PMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSM 499
           PMLQDFP DCWVSIN+MVN+SWG+QYS+ALFKAMSHMLCIGYG+QAPVGM DVWLTMLSM
Sbjct: 273 PMLQDFPPDCWVSINHMVNHSWGRQYSHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSM 332

Query: 500 IVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY 559
           IVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLP DTRQRIH+YYEHRY
Sbjct: 333 IVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRY 392

Query: 560 QGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPG 619
           QGKMFDEESILGELSEPLREEIINF CR LVA MPLFA+ADP+FVT++LTKLRFEVFQPG
Sbjct: 393 QGKMFDEESILGELSEPLREEIINFTCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPG 452

Query: 620 DYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLTRGRRTASVRADTYC 679
           D ++REG++G+KMYFIQHG++SVL +G ++T+L DGSYFGEICLLTRGRRTASVRADTYC
Sbjct: 453 DLVVREGSVGRKMYFIQHGLLSVLARGARDTRLTDGSYFGEICLLTRGRRTASVRADTYC 512

Query: 680 RLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLHKVQHDLNSGVFNYQEN 739
           RLYSLSVD+FN VLEE+PMMRRAFETVA+DRL RIGKKNSIL  K             E 
Sbjct: 513 RLYSLSVDHFNAVLEEFPMMRRAFETVAMDRLLRIGKKNSILQRKRSEPSPGSSGGIME- 571

Query: 740 EIIQQIVQHDREMAHCAHRVQAAASATPTPTPVIWTPLIQAPLQAAAATTSVAIALTHHP 799
              Q +VQHDR+MA        +  A  +  PV+W PL+ APLQAAA T++VAIALTH  
Sbjct: 572 ---QHLVQHDRDMARGVRGRAPSTGAQLSGKPVLWEPLVHAPLQAAAVTSNVAIALTHQ- 627

Query: 800 RLPAAIFRPPPGSGLG-----NLGAGQTPRHLKRLQSLIPSALGSASPASSPSQVDTPSS 854
           R P  +    P + L      + G+  +P        L+P   G   P +S S++  P +
Sbjct: 628 RGPLPLSPDSPATLLARSAWRSAGSPASP--------LVPVRAG---PWASTSRLPAPPA 676

Query: 855 SSFHIQ-QLAGFSAPAGLSPLLPSSSSSPPPGACGSP-SAPTPSAGVAATTIAGFGHFHK 912
            + H     AG S  + L P  P        G  G P SA  PS    AT   G G   +
Sbjct: 677 RTLHASLSRAGRSQVSLLGP--PPGGGGRRLGPRGRPLSASQPSLPQRAT---GDGSPGR 731

Query: 913 ALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPP 946
              GS     S LL      A+ P+   P PA P
Sbjct: 732 KGSGSERLPPSGLLAKPPRTAQPPRPPVPEPATP 765



 Score = 34.3 bits (77), Expect = 0.73
 Identities = 48/153 (31%), Positives = 54/153 (35%), Gaps = 32/153 (20%)

Query: 989  GPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPP-RTFPSAPPRASG 1047
            GPL      P      S    A   ASP+     G  +     P PP RT  ++  RA  
Sbjct: 629  GPLPLSPDSPATLLARSAWRSAGSPASPLVPVRAGPWASTSRLPAPPARTLHASLSRAGR 688

Query: 1048 SHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPH 1107
            S  SLL       PPP    RR  P   P         +SASQP+LPQ      R     
Sbjct: 689  SQVSLL------GPPPGGGGRRLGPRGRP---------LSASQPSLPQ------RATGDG 727

Query: 1108 SSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGR 1140
            S G          R G GS     SG L  P R
Sbjct: 728  SPG----------RKGSGSERLPPSGLLAKPPR 750



 Score = 33.5 bits (75), Expect = 1.3
 Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 10/86 (11%)

Query: 94  RRFRGSLASLGSRGGGSGGTGSGSSHGHLHDSAEERRLIAEGDASPGE-----DRTPP-G 147
           R  R  ++ LG   GG GG   G     L  S       A GD SPG      +R PP G
Sbjct: 685 RAGRSQVSLLGPPPGG-GGRRLGPRGRPLSASQPSLPQRATGDGSPGRKGSGSERLPPSG 743

Query: 148 LAAEPERPGASAQPAASPPPPQQPPQ 173
           L A+P R   +AQP   P P    P+
Sbjct: 744 LLAKPPR---TAQPPRPPVPEPATPR 766


>gi|120433600 cyclic nucleotide gated channel alpha 3 isoform 2
           [Homo sapiens]
          Length = 676

 Score =  191 bits (486), Expect = 3e-48
 Identities = 137/486 (28%), Positives = 241/486 (49%), Gaps = 42/486 (8%)

Query: 235 GSQKAVER-EQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGN--LIIIPVGITFFKDEN 291
           GSQ+  +R  +++ K     ++ P S+  + W   + L +  N  L+I        + E 
Sbjct: 122 GSQEPADRGRRKKTKKKDAIVVDPSSNLYYRWLTAIALPVFYNWYLLICRACFDELQSEY 181

Query: 292 TTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKY-LKSWFMVDFISSI 350
              W+V +  +D  +++D+++  RTG +  +   ++ D  R+   Y   + F +D +S +
Sbjct: 182 LMLWLVLDYSADVLYVLDVLVRARTGFL--EQGLMVSDTNRLWQHYKTTTQFKLDVLSLV 239

Query: 351 PVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYD 410
           P D  +L V T               VRF       RLL+ SRL  +  + E     T  
Sbjct: 240 PTDLAYLKVGTNYPE-----------VRFN------RLLKFSRLFEFFDRTE-----TRT 277

Query: 411 LASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMV--NNSWGKQYSYA 468
               + RI NL+  +L++ HW+ C+ F +     F  D WV  N  +  +    ++Y Y+
Sbjct: 278 NYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNISIPEHGRLSRKYIYS 337

Query: 469 LFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQ 528
           L+ +   +  IG     PV   +    ++  +VG   +A  +G+  ++I ++++SR ++Q
Sbjct: 338 LYWSTLTLTTIGE-TPPPVKDEEYLFVVVDFLVGVLIFATIVGNVGSMISNMNASRAEFQ 396

Query: 529 EKYKQVEQYMSFHKLPPDTRQRIHDYYEHRYQG-KMFDEESILGELSEPLREEI-INFNC 586
            K   ++QYM F K+  D   R+  ++++ +   K  DE+ +L  L + L+ EI IN + 
Sbjct: 397 AKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEIAINVHL 456

Query: 587 RKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG 646
             L   + +F + +   +  ++ KLR  VF PGDYI ++G IGK+MY I  G ++V+   
Sbjct: 457 DTL-KKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEGKLAVVADD 515

Query: 647 --NKETKLADGSYFGEICLL------TRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPM 698
              +   L+DGSYFGEI +L      +  RRTA++R+  Y  L+ LS D+  E L EYP 
Sbjct: 516 GVTQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPE 575

Query: 699 MRRAFE 704
            ++A E
Sbjct: 576 AKKALE 581


>gi|4502917 cyclic nucleotide gated channel alpha 3 isoform 1 [Homo
           sapiens]
          Length = 694

 Score =  190 bits (482), Expect = 8e-48
 Identities = 134/477 (28%), Positives = 236/477 (49%), Gaps = 41/477 (8%)

Query: 243 EQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGN--LIIIPVGITFFKDENTTPWIVFNV 300
           E+++ K     ++ P S+  + W   + L +  N  L+I        + E    W+V + 
Sbjct: 149 EEKKTKKKDAIVVDPSSNLYYRWLTAIALPVFYNWYLLICRACFDELQSEYLMLWLVLDY 208

Query: 301 VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKY-LKSWFMVDFISSIPVDYIFLIV 359
            +D  +++D+++  RTG +  +   ++ D  R+   Y   + F +D +S +P D  +L V
Sbjct: 209 SADVLYVLDVLVRARTGFL--EQGLMVSDTNRLWQHYKTTTQFKLDVLSLVPTDLAYLKV 266

Query: 360 ETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIV 419
            T               VRF       RLL+ SRL  +  + E     T      + RI 
Sbjct: 267 GTNYPE-----------VRFN------RLLKFSRLFEFFDRTE-----TRTNYPNMFRIG 304

Query: 420 NLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMV--NNSWGKQYSYALFKAMSHML 477
           NL+  +L++ HW+ C+ F +     F  D WV  N  +  +    ++Y Y+L+ +   + 
Sbjct: 305 NLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNISIPEHGRLSRKYIYSLYWSTLTLT 364

Query: 478 CIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQY 537
            IG     PV   +    ++  +VG   +A  +G+  ++I ++++SR ++Q K   ++QY
Sbjct: 365 TIGE-TPPPVKDEEYLFVVVDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQY 423

Query: 538 MSFHKLPPDTRQRIHDYYEHRYQG-KMFDEESILGELSEPLREEI-INFNCRKLVASMPL 595
           M F K+  D   R+  ++++ +   K  DE+ +L  L + L+ EI IN +   L   + +
Sbjct: 424 MQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEIAINVHLDTL-KKVRI 482

Query: 596 FANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--NKETKLA 653
           F + +   +  ++ KLR  VF PGDYI ++G IGK+MY I  G ++V+      +   L+
Sbjct: 483 FQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEGKLAVVADDGVTQFVVLS 542

Query: 654 DGSYFGEICLL------TRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFE 704
           DGSYFGEI +L      +  RRTA++R+  Y  L+ LS D+  E L EYP  ++A E
Sbjct: 543 DGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALE 599


>gi|13540549 potassium voltage-gated channel, subfamily H, member 6
           isoform 1 [Homo sapiens]
          Length = 994

 Score =  186 bits (471), Expect = 2e-46
 Identities = 132/480 (27%), Positives = 223/480 (46%), Gaps = 51/480 (10%)

Query: 253 WIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFF---KDENT--------TPWIVFNVV 301
           W I  YS F+  WD  +LLL++   +  P    F    +DE+         +P  V +++
Sbjct: 247 WTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESRRGACSYTCSPLTVVDLI 306

Query: 302 SDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVET 361
            D  F++D+V+NFRT   V  N E++  P+RI + Y K WF++D +++IP D   LI  T
Sbjct: 307 VDIMFVVDIVINFRT-TYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFD--LLIFRT 363

Query: 362 RIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNL 421
             D               T ++ LL+  RL RL+R   + +      Y    A V  + L
Sbjct: 364 GSDET-------------TTLIGLLKTARLLRLVRVARKLDR-----YSEYGAAVLFL-L 404

Query: 422 IGMMLLLCHWDGCLQFLV-----PMLQD---FPDDCWVSINNMVNNS-------WGKQYS 466
           +    L+ HW  C+ + +     P L+    + D   V +    N S          +Y 
Sbjct: 405 MCTFALIAHWLACIWYAIGNVERPYLEHKIGWLDSLGVQLGKRYNGSDPASGPSVQDKYV 464

Query: 467 YALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQ 526
            AL+   S +  +G+G  +P   S+   ++  M++G+  YA   G+ +A+IQ L S   +
Sbjct: 465 TALYFTFSSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTAR 524

Query: 527 YQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRYQ-GKMFDEESILGELSEPLREEIINFN 585
           Y  +  +V++++ FH++P   RQR+ +Y++H +      D  ++L    E L+ +I    
Sbjct: 525 YHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHL 584

Query: 586 CRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTK 645
            R L+   P F+ A    + ++  K +     PGD ++  G +   +YFI  G + +L  
Sbjct: 585 HRALLQHCPAFSGAGKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRD 644

Query: 646 GNKETKLADGSYFGEICLL--TRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAF 703
                 L     FGE   L    G+ +A VRA TYC L+ +   +  EVL+ YP    +F
Sbjct: 645 DVVVAILGKNDIFGEPVSLHAQPGKSSADVRALTYCDLHKIQRADLLEVLDMYPAFAESF 704


>gi|27886653 potassium voltage-gated channel, subfamily H, member 7
           isoform 1 [Homo sapiens]
          Length = 1196

 Score =  178 bits (451), Expect = 3e-44
 Identities = 130/483 (26%), Positives = 225/483 (46%), Gaps = 52/483 (10%)

Query: 252 FWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDE-----------NTTPWIVFNV 300
           F I+H YS F+  WD  +LLL++   I  P    F  ++           + +P  V ++
Sbjct: 398 FTILH-YSPFKAVWDWLILLLVIYTAIFTPYSAAFLLNDREEQKRRECGYSCSPLNVVDL 456

Query: 301 VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVE 360
           + D  F+ID+++NFRT   V  N E++ DP +I + Y K WF++D +++IP D   LI  
Sbjct: 457 IVDIMFIIDILINFRT-TYVNQNEEVVSDPAKIAIHYFKGWFLIDMVAAIPFD--LLIFG 513

Query: 361 TRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN 420
           +  D               T ++ LL+  RL RL+R   + +      Y    A V ++ 
Sbjct: 514 SGSDET-------------TTLIGLLKTARLLRLVRVARKLDR-----YSEYGAAVLML- 554

Query: 421 LIGMMLLLCHWDGCLQFLV-----PMLQD---FPDDCWVSINNMVNNSWGK-------QY 465
           L+ +  L+ HW  C+ + +     P L D   + D     I    N+S          +Y
Sbjct: 555 LMCIFALIAHWLACIWYAIGNVERPYLTDKIGWLDSLGQQIGKRYNDSDSSSGPSIKDKY 614

Query: 466 SYALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRR 525
             AL+   S +  +G+G  +P   S+   ++  M++G+  YA   G+ +A+IQ L S   
Sbjct: 615 VTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTA 674

Query: 526 QYQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY-QGKMFDEESILGELSEPLREEIINF 584
           +Y  +  +V++++ FH++P   RQR+ +Y++H +      D   +L    E L+ +I   
Sbjct: 675 RYHMQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWTYTNGIDMNMVLKGFPECLQADICLH 734

Query: 585 NCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLT 644
             + L+ +   F  A    + ++  K +     PGD ++  G +   +YF+  G + +L 
Sbjct: 735 LNQTLLQNCKAFRGASKGCLRALAMKFKTTHAPPGDTLVHCGDVLTALYFLSRGSIEILK 794

Query: 645 KGNKETKLADGSYFGEICLL--TRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRA 702
                  L     FGE+  L    G+  A VRA TYC L+ +  ++  EVL+ YP     
Sbjct: 795 DDIVVAILGKNDIFGEMVHLYAKPGKSNADVRALTYCDLHKIQREDLLEVLDMYPEFSDH 854

Query: 703 FET 705
           F T
Sbjct: 855 FLT 857


>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
           [Homo sapiens]
          Length = 759

 Score =  175 bits (444), Expect = 2e-43
 Identities = 124/483 (25%), Positives = 241/483 (49%), Gaps = 43/483 (8%)

Query: 237 QKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTP 294
           +K+ ++++E  K     +I P  +  + W   + L ++ N  ++     F   + +    
Sbjct: 211 EKSKDKKEEEKKEVV--VIDPSGNTYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEY 268

Query: 295 WIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FMVDFISSIPVD 353
           W++ + VSD  +LID+ +  RTG +  +   ++ +  ++  KY  +  F +D +S IP D
Sbjct: 269 WLILDYVSDIVYLIDMFVRTRTGYL--EQGLLVKEELKLINKYKSNLQFKLDVLSLIPTD 326

Query: 354 YIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS 413
            ++  +                       + L RLLR SR+  +  + E     T     
Sbjct: 327 LLYFKLGWNYPE-----------------IRLNRLLRFSRMFEFFQRTE-----TRTNYP 364

Query: 414 AVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWV--SINNMVNNSWGKQYSYALFK 471
            + RI NL+  ++++ HW+ C+ + +     F +D WV   IN+       ++Y Y+L+ 
Sbjct: 365 NIFRISNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYW 424

Query: 472 AMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKY 531
           +   +  IG     PV  S+    ++  ++G   +A  +G+  ++I +++++R ++Q + 
Sbjct: 425 STLTLTTIGE-TPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARI 483

Query: 532 KQVEQYMSFHKLPPDTRQRIHDYYEHRYQGKM-FDEESILGELSEPLREEI-INFNCRKL 589
             ++QYM F  +  D  +R+  ++++ +  K   DE+ +L  L + LR EI IN +   L
Sbjct: 484 DAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTL 543

Query: 590 VASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--N 647
              + +FA+ +   +  ++ KL+ +V+ PGDYI ++G IG++MY I+ G ++V+      
Sbjct: 544 -KKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVT 602

Query: 648 KETKLADGSYFGEICLL------TRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRR 701
           +   L+DGSYFGEI +L         RRTA++++  Y  L+ LS D+  E L EYP  + 
Sbjct: 603 QFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKT 662

Query: 702 AFE 704
             E
Sbjct: 663 MLE 665


>gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [Homo
           sapiens]
          Length = 690

 Score =  175 bits (444), Expect = 2e-43
 Identities = 124/483 (25%), Positives = 241/483 (49%), Gaps = 43/483 (8%)

Query: 237 QKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTP 294
           +K+ ++++E  K     +I P  +  + W   + L ++ N  ++     F   + +    
Sbjct: 142 EKSKDKKEEEKKEVV--VIDPSGNTYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEY 199

Query: 295 WIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FMVDFISSIPVD 353
           W++ + VSD  +LID+ +  RTG +  +   ++ +  ++  KY  +  F +D +S IP D
Sbjct: 200 WLILDYVSDIVYLIDMFVRTRTGYL--EQGLLVKEELKLINKYKSNLQFKLDVLSLIPTD 257

Query: 354 YIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS 413
            ++  +                       + L RLLR SR+  +  + E     T     
Sbjct: 258 LLYFKLGWNYPE-----------------IRLNRLLRFSRMFEFFQRTE-----TRTNYP 295

Query: 414 AVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWV--SINNMVNNSWGKQYSYALFK 471
            + RI NL+  ++++ HW+ C+ + +     F +D WV   IN+       ++Y Y+L+ 
Sbjct: 296 NIFRISNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYW 355

Query: 472 AMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKY 531
           +   +  IG     PV  S+    ++  ++G   +A  +G+  ++I +++++R ++Q + 
Sbjct: 356 STLTLTTIGE-TPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARI 414

Query: 532 KQVEQYMSFHKLPPDTRQRIHDYYEHRYQGKM-FDEESILGELSEPLREEI-INFNCRKL 589
             ++QYM F  +  D  +R+  ++++ +  K   DE+ +L  L + LR EI IN +   L
Sbjct: 415 DAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTL 474

Query: 590 VASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--N 647
              + +FA+ +   +  ++ KL+ +V+ PGDYI ++G IG++MY I+ G ++V+      
Sbjct: 475 -KKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVT 533

Query: 648 KETKLADGSYFGEICLL------TRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRR 701
           +   L+DGSYFGEI +L         RRTA++++  Y  L+ LS D+  E L EYP  + 
Sbjct: 534 QFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKT 593

Query: 702 AFE 704
             E
Sbjct: 594 MLE 596


>gi|26051273 voltage-gated potassium channel, subfamily H, member 2
           isoform c [Homo sapiens]
          Length = 819

 Score =  174 bits (442), Expect = 3e-43
 Identities = 124/474 (26%), Positives = 214/474 (45%), Gaps = 54/474 (11%)

Query: 253 WIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTT------------PWIVFNV 300
           W I  YS F+  WD  +LLL++   +  P    F   E               P  V ++
Sbjct: 58  WTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLKETEEGPPATECGYACQPLAVVDL 117

Query: 301 VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVE 360
           + D  F++D+++NFRT   V  N E++  P RI + Y K WF++D +++IP D +     
Sbjct: 118 IVDIMFIVDILINFRT-TYVNANEEVVSHPGRIAVHYFKGWFLIDMVAAIPFDLLIFGSG 176

Query: 361 TRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN 420
           +     + KTAR LR+VR  +        +L R   Y               +AV+ +  
Sbjct: 177 SEELIGLLKTARLLRLVRVAR--------KLDRYSEY--------------GAAVLFL-- 212

Query: 421 LIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSY------------- 467
           L+    L+ HW  C+ + +  ++    D  +   + + +  GK Y+              
Sbjct: 213 LMCTFALIAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYV 272

Query: 468 -ALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQ 526
            AL+   S +  +G+G  +P   S+   ++  M++G+  YA   G+ +A+IQ L S   +
Sbjct: 273 TALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTAR 332

Query: 527 YQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRYQ-GKMFDEESILGELSEPLREEIINFN 585
           Y  +  +V +++ FH++P   RQR+ +Y++H +      D  ++L    E L+ +I    
Sbjct: 333 YHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHL 392

Query: 586 CRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTK 645
            R L+     F  A    + ++  K +     PGD ++  G +   +YFI  G + +L  
Sbjct: 393 NRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEILRG 452

Query: 646 GNKETKLADGSYFGE-ICLLTR-GRRTASVRADTYCRLYSLSVDNFNEVLEEYP 697
                 L     FGE + L  R G+    VRA TYC L+ +  D+  EVL+ YP
Sbjct: 453 DVVVAILGKNDIFGEPLNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYP 506



 Score = 35.0 bits (79), Expect = 0.43
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 22/102 (21%)

Query: 98  GSLASLGSRGGGSGGTGSGSSHGHLHDSAEERRLIAEGDASPGEDRTPPGLAAEPERPGA 157
           G +++LG    G+G +  G   G   +S       + G +SP         ++E E PG 
Sbjct: 563 GEVSALGPGRAGAGPSSRGRPGGPWGESP------SSGPSSPE--------SSEDEGPGR 608

Query: 158 SAQPA-----ASPPPPQQPP--QPASASCEQPSVDTAIKVEG 192
           S+ P      +SP PP +PP  +P    CE+ S DT   + G
Sbjct: 609 SSSPLRLVPFSSPRPPGEPPGGEPLMEDCEKSS-DTCNPLSG 649


>gi|4557729 voltage-gated potassium channel, subfamily H, member 2
           isoform a [Homo sapiens]
          Length = 1159

 Score =  174 bits (442), Expect = 3e-43
 Identities = 124/474 (26%), Positives = 214/474 (45%), Gaps = 54/474 (11%)

Query: 253 WIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTT------------PWIVFNV 300
           W I  YS F+  WD  +LLL++   +  P    F   E               P  V ++
Sbjct: 398 WTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLKETEEGPPATECGYACQPLAVVDL 457

Query: 301 VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVE 360
           + D  F++D+++NFRT   V  N E++  P RI + Y K WF++D +++IP D +     
Sbjct: 458 IVDIMFIVDILINFRT-TYVNANEEVVSHPGRIAVHYFKGWFLIDMVAAIPFDLLIFGSG 516

Query: 361 TRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN 420
           +     + KTAR LR+VR  +        +L R   Y               +AV+ +  
Sbjct: 517 SEELIGLLKTARLLRLVRVAR--------KLDRYSEY--------------GAAVLFL-- 552

Query: 421 LIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSY------------- 467
           L+    L+ HW  C+ + +  ++    D  +   + + +  GK Y+              
Sbjct: 553 LMCTFALIAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYV 612

Query: 468 -ALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQ 526
            AL+   S +  +G+G  +P   S+   ++  M++G+  YA   G+ +A+IQ L S   +
Sbjct: 613 TALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTAR 672

Query: 527 YQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRYQ-GKMFDEESILGELSEPLREEIINFN 585
           Y  +  +V +++ FH++P   RQR+ +Y++H +      D  ++L    E L+ +I    
Sbjct: 673 YHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHL 732

Query: 586 CRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTK 645
            R L+     F  A    + ++  K +     PGD ++  G +   +YFI  G + +L  
Sbjct: 733 NRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEILRG 792

Query: 646 GNKETKLADGSYFGE-ICLLTR-GRRTASVRADTYCRLYSLSVDNFNEVLEEYP 697
                 L     FGE + L  R G+    VRA TYC L+ +  D+  EVL+ YP
Sbjct: 793 DVVVAILGKNDIFGEPLNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYP 846



 Score = 35.0 bits (79), Expect = 0.43
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 22/102 (21%)

Query: 98  GSLASLGSRGGGSGGTGSGSSHGHLHDSAEERRLIAEGDASPGEDRTPPGLAAEPERPGA 157
           G +++LG    G+G +  G   G   +S       + G +SP         ++E E PG 
Sbjct: 903 GEVSALGPGRAGAGPSSRGRPGGPWGESP------SSGPSSPE--------SSEDEGPGR 948

Query: 158 SAQPA-----ASPPPPQQPP--QPASASCEQPSVDTAIKVEG 192
           S+ P      +SP PP +PP  +P    CE+ S DT   + G
Sbjct: 949 SSSPLRLVPFSSPRPPGEPPGGEPLMEDCEKSS-DTCNPLSG 989


>gi|4504831 potassium voltage-gated channel, subfamily H, member 1
           isoform 2 [Homo sapiens]
          Length = 962

 Score =  173 bits (439), Expect = 8e-43
 Identities = 129/500 (25%), Positives = 221/500 (44%), Gaps = 57/500 (11%)

Query: 235 GSQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTP 294
           GS    + +QE  K+    I+H Y  F+  WD  +L+L     I++P  ++F   +N   
Sbjct: 191 GSDILPQYKQEAPKTPPHIILH-YCVFKTTWDWIILILTFYTAILVPYNVSFKTRQNNVA 249

Query: 295 WIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDY 354
           W+V + + D  FL+D+VLNF T  V     E+I DP+ I+M YLK+WF++D +S +P D 
Sbjct: 250 WLVVDSIVDVIFLVDIVLNFHTTFVGPAG-EVISDPKLIRMNYLKTWFVIDLLSCLPYDV 308

Query: 355 IFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASA 414
           I       +D  +     +L++V         RLLRL R+ R +  + E        A+ 
Sbjct: 309 INAF--ENVDEGISSLFSSLKVV---------RLLRLGRVARKLDHYIEYG------AAV 351

Query: 415 VVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSW--------GKQYS 466
           +V +V + G   L  HW  C+ + +   + F +D       + NNSW        G  Y 
Sbjct: 352 LVLLVCVFG---LAAHWMACIWYSIGDYEIFDED----TKTIRNNSWLYQLAMDIGTPYQ 404

Query: 467 Y--------------------ALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCY 506
           +                    +L+  M+ +  +G+G  AP    +    +  M++G+  Y
Sbjct: 405 FNGSGSGKWEGGPSKNSVYISSLYFTMTSLTSVGFGNIAPSTDIEKIFAVAIMMIGSLLY 464

Query: 507 AMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY-QGKMFD 565
           A   G+ T + Q + ++  +Y E    V  ++  +++P    +R+ DY    +   +  D
Sbjct: 465 ATIFGNVTTIFQQMYANTNRYHEMLNSVRDFLKLYQVPKGLSERVMDYIVSTWSMSRGID 524

Query: 566 EESILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIRE 625
            E +L    + +R +I     RK+    P F  A    + ++  + +     PGD I   
Sbjct: 525 TEKVLQICPKDMRADICVHLNRKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHA 584

Query: 626 GTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICL--LTRGRRTASVRADTYCRLYS 683
           G     + F+  G + V+        L  G  FG++     T  +  A+VRA TYC L+ 
Sbjct: 585 GESVDSLCFVVSGSLEVIQDDEVVAILGKGDVFGDVFWKEATLAQSCANVRALTYCDLHV 644

Query: 684 LSVDNFNEVLEEYPMMRRAF 703
           +  D   +VLE Y     +F
Sbjct: 645 IKRDALQKVLEFYTAFSHSF 664


>gi|42718011 cyclic nucleotide gated channel alpha 2 [Homo sapiens]
          Length = 664

 Score =  171 bits (433), Expect = 4e-42
 Identities = 125/473 (26%), Positives = 227/473 (47%), Gaps = 43/473 (9%)

Query: 248 KSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVSDTF 305
           K    +++ P  D+ + W   + + ++ N  ++     F   +      W+V + VSD  
Sbjct: 126 KKFELFVLDPAGDWYYCWLFVIAMPVLYNWCLLVARACFSDLQKGYYLVWLVLDYVSDVV 185

Query: 306 FLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FMVDFISSIPVDYIFLIVETRID 364
           ++ DL +  RTG +  +   ++ D ++++  Y+ +  F +D  S IP D I+  V+    
Sbjct: 186 YIADLFIRLRTGFL--EQGLLVKDTKKLRDNYIHTLQFKLDVASIIPTDLIYFAVDIHSP 243

Query: 365 SEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGM 424
                       VRF       RLL  +R+  +  + E     T      + RI NL+  
Sbjct: 244 E-----------VRFN------RLLHFARMFEFFDRTE-----TRTNYPNIFRISNLVLY 281

Query: 425 MLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWG---KQYSYALFKAMSHMLCIGY 481
           +L++ HW+ C+ + +     F  D WV   N+ +  +G   ++Y Y L+ +   +  IG 
Sbjct: 282 ILVIIHWNACIYYAISKSIGFGVDTWV-YPNITDPEYGYLAREYIYCLYWSTLTLTTIGE 340

Query: 482 GRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFH 541
               PV   +    +   ++G   +A  +G+  ++I +++++R ++Q K   V+ YM F 
Sbjct: 341 -TPPPVKDEEYLFVIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFR 399

Query: 542 KLPPDTRQRIHDYYEHRYQGKM-FDEESILGELSEPLREEI-INFNCRKLVASMPLFANA 599
           K+      ++  ++++ +  K   DE  IL  L   LR EI IN +   L   + +F + 
Sbjct: 400 KVSKGMEAKVIRWFDYLWTNKKTVDEREILKNLPAKLRAEIAINVHLSTL-KKVRIFHDC 458

Query: 600 DPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--NKETKLADGSY 657
           +   +  ++ KLR +VF PGDYI R+G IGK+MY I+ G ++V+      +   L+ GS 
Sbjct: 459 EAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSC 518

Query: 658 FGEICLLT------RGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFE 704
           FGEI +L         RRTA++R+  Y  L+ LS D+  E + EYP  ++  E
Sbjct: 519 FGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKKVLE 571


>gi|82617546 cyclic nucleotide gated channel alpha 4 [Homo sapiens]
          Length = 575

 Score =  170 bits (431), Expect = 7e-42
 Identities = 121/478 (25%), Positives = 229/478 (47%), Gaps = 41/478 (8%)

Query: 254 IIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVSDTFFLIDLV 311
           ++ P  D+ ++W  TM+  ++ NLII+     F   +      W+V +  SD  +L+D+V
Sbjct: 26  VLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMV 85

Query: 312 LNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FMVDFISSIPVDYIFLIVETRIDSEVYKT 370
           + F TG +  +   +++D  RI  +Y+++W F +D  S +P D +++             
Sbjct: 86  VRFHTGFL--EQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYV------------- 130

Query: 371 ARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCH 430
               R+   T  L L R LR  RL     + E     T        RI  L+  + ++ H
Sbjct: 131 ----RLGPHTPTLRLNRFLRAPRLFEAFDRTE-----TRTAYPNAFRIAKLMLYIFVVIH 181

Query: 431 WDGCLQFLVPMLQDFPDDCWVSINNMVNN--SWGKQYSYALFKAMSHMLCIGYGRQAPVG 488
           W+ CL F +     F  D WV  +          +QY Y+ +   S ++    G   P  
Sbjct: 182 WNSCLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFY--FSTLILTTVGDTPPPA 239

Query: 489 MSDVWLTMLS-MIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDT 547
             + +L M+   ++    +A  +G  +++I +++++   +   +  V++YM    +    
Sbjct: 240 REEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKL 299

Query: 548 RQRIHDYYEH-RYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTS 606
            +R+ D+Y+H +   KM +E +IL  L E LR E+        ++ + +F N + + +  
Sbjct: 300 ERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEE 359

Query: 607 MLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--NKETKLADGSYFGEICL- 663
           ++ KL+ + + PG+Y+ R+G IG++MY I+ G ++V+      +   L  G YFGEI + 
Sbjct: 360 LVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISII 419

Query: 664 -----LTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGK 716
                ++  RRTA++++  Y  L+ LS ++  EVL EYP  +   E    + L ++ K
Sbjct: 420 NIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNK 477


>gi|22024390 potassium voltage-gated channel, subfamily H, member 5
           isoform 1 [Homo sapiens]
          Length = 988

 Score =  170 bits (430), Expect = 9e-42
 Identities = 130/495 (26%), Positives = 218/495 (44%), Gaps = 48/495 (9%)

Query: 235 GSQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTP 294
           GS    + +QE  K+    I+H Y  F+  WD  +L+L     I++P  ++F   +N   
Sbjct: 188 GSDILPQYKQEAPKTPPHIILH-YCAFKTTWDWVILILTFYTAIMVPYNVSFKTKQNNIA 246

Query: 295 WIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDY 354
           W+V + V D  FL+D+VLNF T   V    E+I DP+ I+M YLK+WF++D +S +P D 
Sbjct: 247 WLVLDSVVDVIFLVDIVLNFHT-TFVGPGGEVISDPKLIRMNYLKTWFVIDLLSCLPYDI 305

Query: 355 IFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASA 414
           I       +D  +     +L++V         RLLRL R+ R +  + E        A+ 
Sbjct: 306 INAF--ENVDEGISSLFSSLKVV---------RLLRLGRVARKLDHYLEYG------AAV 348

Query: 415 VVRIVNLIGMMLLLCHWDGCLQFLV-------PMLQDFPDDCW-------VSINNMVNNS 460
           +V +V + G   L+ HW  C+ + +        +      D W       +      N S
Sbjct: 349 LVLLVCVFG---LVAHWLACIWYSIGDYEVIDEVTNTIQIDSWLYQLALSIGTPYRYNTS 405

Query: 461 WG---------KQYSYALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIG 511
            G           Y  +L+  M+ +  IG+G  AP    +   ++  M+VG+  YA   G
Sbjct: 406 AGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATIFG 465

Query: 512 HATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY-QGKMFDEESIL 570
           + T + Q + ++  +Y E    V  ++  +++P    +R+ DY    +   K  D E +L
Sbjct: 466 NVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVL 525

Query: 571 GELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGK 630
               + +R +I     RK+    P F  A    + ++  + +     PGD I   G    
Sbjct: 526 SICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVD 585

Query: 631 KMYFIQHGVVSVLTKGNKETKLADGSYFGEICL--LTRGRRTASVRADTYCRLYSLSVDN 688
            + F+  G + V+        L  G  FG+I     T     A+VRA TYC L+ +  + 
Sbjct: 586 ALCFVVSGSLEVIQDDEVVAILGKGDVFGDIFWKETTLAHACANVRALTYCDLHIIKREA 645

Query: 689 FNEVLEEYPMMRRAF 703
             +VL+ Y     +F
Sbjct: 646 LLKVLDFYTAFANSF 660


>gi|27886648 potassium voltage-gated channel, subfamily H, member 5
           isoform 2 [Homo sapiens]
          Length = 624

 Score =  170 bits (430), Expect = 9e-42
 Identities = 130/495 (26%), Positives = 218/495 (44%), Gaps = 48/495 (9%)

Query: 235 GSQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTP 294
           GS    + +QE  K+    I+H Y  F+  WD  +L+L     I++P  ++F   +N   
Sbjct: 130 GSDILPQYKQEAPKTPPHIILH-YCAFKTTWDWVILILTFYTAIMVPYNVSFKTKQNNIA 188

Query: 295 WIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDY 354
           W+V + V D  FL+D+VLNF T   V    E+I DP+ I+M YLK+WF++D +S +P D 
Sbjct: 189 WLVLDSVVDVIFLVDIVLNFHT-TFVGPGGEVISDPKLIRMNYLKTWFVIDLLSCLPYDI 247

Query: 355 IFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASA 414
           I       +D  +     +L++V         RLLRL R+ R +  + E        A+ 
Sbjct: 248 INAF--ENVDEGISSLFSSLKVV---------RLLRLGRVARKLDHYLEYG------AAV 290

Query: 415 VVRIVNLIGMMLLLCHWDGCLQFLV-------PMLQDFPDDCW-------VSINNMVNNS 460
           +V +V + G   L+ HW  C+ + +        +      D W       +      N S
Sbjct: 291 LVLLVCVFG---LVAHWLACIWYSIGDYEVIDEVTNTIQIDSWLYQLALSIGTPYRYNTS 347

Query: 461 WG---------KQYSYALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIG 511
            G           Y  +L+  M+ +  IG+G  AP    +   ++  M+VG+  YA   G
Sbjct: 348 AGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATIFG 407

Query: 512 HATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY-QGKMFDEESIL 570
           + T + Q + ++  +Y E    V  ++  +++P    +R+ DY    +   K  D E +L
Sbjct: 408 NVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVL 467

Query: 571 GELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGK 630
               + +R +I     RK+    P F  A    + ++  + +     PGD I   G    
Sbjct: 468 SICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVD 527

Query: 631 KMYFIQHGVVSVLTKGNKETKLADGSYFGEICL--LTRGRRTASVRADTYCRLYSLSVDN 688
            + F+  G + V+        L  G  FG+I     T     A+VRA TYC L+ +  + 
Sbjct: 528 ALCFVVSGSLEVIQDDEVVAILGKGDVFGDIFWKETTLAHACANVRALTYCDLHIIKREA 587

Query: 689 FNEVLEEYPMMRRAF 703
             +VL+ Y     +F
Sbjct: 588 LLKVLDFYTAFANSF 602


>gi|27886651 potassium voltage-gated channel, subfamily H, member 6
           isoform 2 [Homo sapiens]
          Length = 905

 Score =  170 bits (430), Expect = 9e-42
 Identities = 123/465 (26%), Positives = 206/465 (44%), Gaps = 74/465 (15%)

Query: 253 WIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFF---KDENT--------TPWIVFNVV 301
           W I  YS F+  WD  +LLL++   +  P    F    +DE+         +P  V +++
Sbjct: 247 WTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESRRGACSYTCSPLTVVDLI 306

Query: 302 SDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVET 361
            D  F++D+V+NFRT   V  N E++  P+RI + Y K WF++D +++IP D   LI  T
Sbjct: 307 VDIMFVVDIVINFRT-TYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFD--LLIFRT 363

Query: 362 RIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNL 421
             D               T ++ LL+  RL RL+R   + +      Y    A V  + L
Sbjct: 364 GSDET-------------TTLIGLLKTARLLRLVRVARKLDR-----YSEYGAAVLFL-L 404

Query: 422 IGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIGY 481
           +    L+ HW  C+  L                                        +G+
Sbjct: 405 MCTFALIAHWLACICSLTS--------------------------------------VGF 426

Query: 482 GRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFH 541
           G  +P   S+   ++  M++G+  YA   G+ +A+IQ L S   +Y  +  +V++++ FH
Sbjct: 427 GNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFH 486

Query: 542 KLPPDTRQRIHDYYEHRYQ-GKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANAD 600
           ++P   RQR+ +Y++H +      D  ++L    E L+ +I     R L+   P F+ A 
Sbjct: 487 QIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFSGAG 546

Query: 601 PNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGE 660
              + ++  K +     PGD ++  G +   +YFI  G + +L        L     FGE
Sbjct: 547 KGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGE 606

Query: 661 ICLL--TRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAF 703
              L    G+ +A VRA TYC L+ +   +  EVL+ YP    +F
Sbjct: 607 PVSLHAQPGKSSADVRALTYCDLHKIQRADLLEVLDMYPAFAESF 651


>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
            [Homo sapiens]
          Length = 1017

 Score =  165 bits (418), Expect = 2e-40
 Identities = 206/893 (23%), Positives = 334/893 (37%), Gaps = 161/893 (18%)

Query: 207  RLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGFWIIHPYSDFRFYWD 266
            R GQ G          +P V ++ +   G  + +             ++H YS  +  WD
Sbjct: 185  RRGQGGMKANNNVFEPKPSVPEYKVASVGGSRCL-------------LLH-YSVSKAIWD 230

Query: 267  LTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDT----FFLIDLVLNFRTGIVVED 322
              +LL      + +P  + F  D++T       +VSD      F++D++LNFRT  V + 
Sbjct: 231  GLILLATFYVAVTVPYNVCFSGDDDTPITSRHTLVSDIAVEMLFILDIILNFRTTYVSQS 290

Query: 323  NTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKI 382
              ++I  P+ I + YL +WF +D I+++P D +++   T                  T +
Sbjct: 291  G-QVISAPRSIGLHYLATWFFIDLIAALPFDLLYIFNIT-----------------VTSL 332

Query: 383  LSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLV--- 439
            + LL+ +RL RL+R + + E      Y   SAVV +  L+ +  LL HW  C+ +++   
Sbjct: 333  VHLLKTVRLLRLLRLLQKLER-----YSQCSAVV-LTLLMSVFALLAHWMACIWYVIGRR 386

Query: 440  ------PMLQDFPDDCWVS----------INNMVNN-SWGKQYSYALFKAMSHMLCIGYG 482
                  P+L D     W+           +N  V   S    Y  AL+  +S +  +G+G
Sbjct: 387  EMEANDPLLWDIG---WLHELGKRLEVPYVNGSVGGPSRRSAYIAALYFTLSSLTSVGFG 443

Query: 483  RQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHK 542
                   ++   ++ +M++GA  +A+  G+ TA+IQ + S R  Y  + K ++ ++  H+
Sbjct: 444  NVCANTDAEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHSRMKDLKDFIRVHR 503

Query: 543  LPPDTRQRIHDYYEHRYQ-GKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANADP 601
            LP   +QR+ +Y++  +      D   +L +  + LR +I   +  + +  +PLF  A  
Sbjct: 504  LPRPLKQRMLEYFQTTWAVNSGIDANELLRDFPDELRADIA-MHLNREILQLPLFGAASR 562

Query: 602  NFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFG-- 659
              + ++   ++     PG+Y++R G   +  Y++  G + VL        L  G   G  
Sbjct: 563  GCLRALSLHIKTSFCAPGEYLLRRGDALQAHYYVCSGSLEVLRDNMVLAILGKGDLIGAD 622

Query: 660  --------------EICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFET 705
                             L T    +A V+A TYC L  LS     EVL  YP    AF  
Sbjct: 623  IPEPGQEPGLGADPNFVLKT----SADVKALTYCGLQQLSSRGLAEVLRLYPEYGAAF-- 676

Query: 706  VALDRLDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHR-----VQ 760
                   R G    +  +  Q    SG+  +  +  + Q       +   + +      +
Sbjct: 677  -------RAGLPRDLTFNLRQGSDTSGLSRFSRSPRLSQ--PRSESLGSSSDKTLPSITE 727

Query: 761  AAASATPTPTPVIWTPLIQAPLQAAAATTSVAIALTHH-PRLPAAIFRPPPGSGLGNLGA 819
            A + A P   P    PL+   L  A    S+   L    P   A +  P     L    A
Sbjct: 728  AESGAEPGGGPRPRRPLLLPNLSPARPRGSLVSLLGEELPPFSALVSSPSLSPSLSPALA 787

Query: 820  GQ--------TPR---HLKRLQSLIPSALGSASPASSPSQVD-------TPSSSSFHIQQ 861
            GQ         PR     K  Q LIP       P  SP  VD       T  + SF   +
Sbjct: 788  GQGHSASPHGPPRCSAAWKPPQLLIPPLGTFGPPDLSPRIVDGIEDSGSTAEAPSFRFSR 847

Query: 862  LAGFSAPAGLSPLLP-SSSSSPPPGACGSPSAPTPSAGV-----------------AATT 903
                       P LP   S +PP G   SP   + +  V                  +  
Sbjct: 848  ----------RPELPRPRSQAPPTGTRPSPELASEAEEVKEKVCRLNQEISRLNQEVSQL 897

Query: 904  IAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQPSPAPPGARGGLGLPEHFLPPPP 963
                 H    L   L     P  +   P    PQ   P  +P  +R           PPP
Sbjct: 898  SRELRHIMGLLQARLGPPGHPAGSAWTPDPPCPQLRPPCLSPCASR-----------PPP 946

Query: 964  SSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASP 1016
            S +  + +        G +  G A   L     PP   EP  L       ASP
Sbjct: 947  SLQDTTLAEVHCPASVGTMETGTALLDLRPSILPPYPSEPDPLGPSPVPEASP 999



 Score = 41.2 bits (95), Expect = 0.006
 Identities = 72/274 (26%), Positives = 95/274 (34%), Gaps = 67/274 (24%)

Query: 916  GSLSSSDSPLLTPLQPGAR---SPQAAQP------SPAPPGARGGL-GLPEHFLPP---- 961
            GS S    P +T  + GA     P+  +P      SPA P  RG L  L    LPP    
Sbjct: 715  GSSSDKTLPSITEAESGAEPGGGPRPRRPLLLPNLSPARP--RGSLVSLLGEELPPFSAL 772

Query: 962  -PPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQP---EPPSLVAGASGGASPV 1017
                S SPS SP   GQ           G  ++P  PPR     +PP L+    G   P 
Sbjct: 773  VSSPSLSPSLSPALAGQ-----------GHSASPHGPPRCSAAWKPPQLLIPPLGTFGPP 821

Query: 1018 GFTPR--GGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLT 1075
              +PR   G+   G +   P    S  P           PP  + P P++          
Sbjct: 822  DLSPRIVDGIEDSGSTAEAPSFRFSRRPELPRPRSQA--PPTGTRPSPELASEAEEVKEK 879

Query: 1076 PGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGL 1135
              RL Q++  ++       Q+ +Q L R   H  G   A                    L
Sbjct: 880  VCRLNQEISRLN-------QEVSQ-LSRELRHIMGLLQAR-------------------L 912

Query: 1136 GPPGRPYGAI-----PGQHVTLPRKTSSGSLPPP 1164
            GPPG P G+      P   +  P  +   S PPP
Sbjct: 913  GPPGHPAGSAWTPDPPCPQLRPPCLSPCASRPPP 946



 Score = 31.2 bits (69), Expect = 6.2
 Identities = 61/232 (26%), Positives = 78/232 (33%), Gaps = 53/232 (22%)

Query: 982  LSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGP--PRTFP 1039
            L  G  T  LS     PR  +P S   G+S   +    T     + PG  P P  P   P
Sbjct: 688  LRQGSDTSGLSRFSRSPRLSQPRSESLGSSSDKTLPSITEAESGAEPGGGPRPRRPLLLP 747

Query: 1040 S-APPRASGSHGSLL---LPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQ 1095
            + +P R  GS  SLL   LPP S+           +P L+P           +  PAL  
Sbjct: 748  NLSPARPRGSLVSLLGEELPPFSA--------LVSSPSLSP-----------SLSPALAG 788

Query: 1096 DGAQTLRRASPHSSGESMAAFP----LFPRAGGGSGGSGSSGGLGPPGRPYGAIPGQHVT 1151
             G      ASPH      AA+     L P            G  GPP      + G    
Sbjct: 789  QG----HSASPHGPPRCSAAWKPPQLLIP----------PLGTFGPPDLSPRIVDG---- 830

Query: 1152 LPRKTSSGSLPPPLSLFGAR----ATSSGGPPLTAGPQREPGARPEPVRSKL 1199
               + S  +   P   F  R       S  PP    P  E  +  E V+ K+
Sbjct: 831  --IEDSGSTAEAPSFRFSRRPELPRPRSQAPPTGTRPSPELASEAEEVKEKV 880


>gi|27437001 potassium voltage-gated channel, subfamily H, member 1
           isoform 1 [Homo sapiens]
          Length = 989

 Score =  165 bits (417), Expect = 3e-40
 Identities = 129/516 (25%), Positives = 220/516 (42%), Gaps = 62/516 (12%)

Query: 235 GSQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTP 294
           GS    + +QE  K+    I+H Y  F+  WD  +L+L     I++P  ++F   +N   
Sbjct: 191 GSDILPQYKQEAPKTPPHIILH-YCVFKTTWDWIILILTFYTAILVPYNVSFKTRQNNVA 249

Query: 295 WIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDY 354
           W+V + + D  FL+D+VLNF T  V     E+I DP+ I+M YLK+WF++D +S +P D 
Sbjct: 250 WLVVDSIVDVIFLVDIVLNFHTTFVGPAG-EVISDPKLIRMNYLKTWFVIDLLSCLPYDV 308

Query: 355 IFLIVETRIDSEVY----------------KTARALRIVRFTKILSLLRLLRLSRLIRYI 398
           I         S                   +   +  I      L ++RLLRL R+ R +
Sbjct: 309 INAFENVDEVSAFMGDPGKIGFADQIPPPLEGRESQGISSLFSSLKVVRLLRLGRVARKL 368

Query: 399 HQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVN 458
             + E        A+ +V +V + G   L  HW  C+ + +   + F +D       + N
Sbjct: 369 DHYIEYG------AAVLVLLVCVFG---LAAHWMACIWYSIGDYEIFDEDT----KTIRN 415

Query: 459 NSW--------GKQYSY--------------------ALFKAMSHMLCIGYGRQAPVGMS 490
           NSW        G  Y +                    +L+  M+ +  +G+G  AP    
Sbjct: 416 NSWLYQLAMDIGTPYQFNGSGSGKWEGGPSKNSVYISSLYFTMTSLTSVGFGNIAPSTDI 475

Query: 491 DVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDTRQR 550
           +    +  M++G+  YA   G+ T + Q + ++  +Y E    V  ++  +++P    +R
Sbjct: 476 EKIFAVAIMMIGSLLYATIFGNVTTIFQQMYANTNRYHEMLNSVRDFLKLYQVPKGLSER 535

Query: 551 IHDYYEHRY-QGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLT 609
           + DY    +   +  D E +L    + +R +I     RK+    P F  A    + ++  
Sbjct: 536 VMDYIVSTWSMSRGIDTEKVLQICPKDMRADICVHLNRKVFKEHPAFRLASDGCLRALAM 595

Query: 610 KLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICL--LTRG 667
           + +     PGD I   G     + F+  G + V+        L  G  FG++     T  
Sbjct: 596 EFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQDDEVVAILGKGDVFGDVFWKEATLA 655

Query: 668 RRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAF 703
           +  A+VRA TYC L+ +  D   +VLE Y     +F
Sbjct: 656 QSCANVRALTYCDLHVIKRDALQKVLEFYTAFSHSF 691


>gi|27886667 potassium voltage-gated channel, subfamily H, member 8
           [Homo sapiens]
          Length = 1107

 Score =  159 bits (401), Expect = 2e-38
 Identities = 118/522 (22%), Positives = 234/522 (44%), Gaps = 68/522 (13%)

Query: 248 KSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDEN---TTPWIVFNVVSDT 304
           K + F ++H +S F+  WD  +LL      + +P  + F  +++   T    V ++  + 
Sbjct: 208 KKSKFILLH-FSTFKAGWDWLILLATFYVAVTVPYNVCFIGNDDLSTTRSTTVSDIAVEI 266

Query: 305 FFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVETRID 364
            F+ID++LNFRT  V +   ++I + + I + Y+ +WF++D I+++P D ++    T   
Sbjct: 267 LFIIDIILNFRTTYVSKSG-QVIFEARSICIHYVTTWFIIDLIAALPFDLLYAFNVT--- 322

Query: 365 SEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGM 424
                      +V    +L  +RLLRL RL++ + ++ +  H T       + +  L+ M
Sbjct: 323 -----------VVSLVHLLKTVRLLRLLRLLQKLDRYSQ--HST-------IVLTLLMSM 362

Query: 425 MLLLCHWDGCLQFLVPMLQDFPDDC------------------WVSINNMVNNSWGKQYS 466
             LL HW  C+ +++  ++   +                    +   N +   S    Y 
Sbjct: 363 FALLAHWMACIWYVIGKMEREDNSLLKWEVGWLHELGKRLESPYYGNNTLGGPSIRSAYI 422

Query: 467 YALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQ 526
            AL+  +S +  +G+G  +    ++   ++ +M++GA  +A+  G+ TA+IQ + S    
Sbjct: 423 AALYFTLSSLTSVGFGNVSANTDAEKIFSICTMLIGALMHALVFGNVTAIIQRMYSRWSL 482

Query: 527 YQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRYQ-GKMFDEESILGELSEPLREEIINFN 585
           Y  + K ++ ++  H LP   +QR+ +Y++  +      D   +L +  + LR + I  +
Sbjct: 483 YHTRTKDLKDFIRVHHLPQQLKQRMLEYFQTTWSVNNGIDSNELLKDFPDELRSD-ITMH 541

Query: 586 CRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTK 645
             K +  + LF  A    + S+   ++     PG+Y++R+G   + +YF+  G + VL  
Sbjct: 542 LNKEILQLSLFECASRGCLRSLSLHIKTSFCAPGEYLLRQGDALQAIYFVCSGSMEVLKD 601

Query: 646 GNKETKLADGSYFGEICLLTRG--RRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAF 703
                 L  G   G    +     +  A V+A TYC L  + +    EVL+ YP     F
Sbjct: 602 SMVLAILGKGDLIGANLSIKDQVIKTNADVKALTYCDLQCIILKGLFEVLDLYPEYAHKF 661

Query: 704 ETVALDRLDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQI 745
                             +  +QHDL   +    E+++I ++
Sbjct: 662 ------------------VEDIQHDLTYNLREGHESDVISRL 685


>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
            sapiens]
          Length = 1251

 Score =  156 bits (394), Expect = 1e-37
 Identities = 118/449 (26%), Positives = 211/449 (46%), Gaps = 53/449 (11%)

Query: 265  WDLTMLLLMVGNLIIIPV--GITFFKDENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVED 322
            W   +++    N  +IPV     +   +N   W++ + + D  + +D+ + F+T +    
Sbjct: 659  WLFFVVMAWNWNCWLIPVRWAFPYQTPDNIHHWLLMDYLCDLIYFLDITV-FQTRLQFVR 717

Query: 323  NTEIILDPQRIKMKYLKSW-FMVDFISSIPVDYIFLIVETRIDSEVYKTARALRIVRFTK 381
              +II D + ++  YLKS  F +D +S +P+D+++L V                      
Sbjct: 718  GGDIITDKKDMRNNYLKSRRFKMDLLSLLPLDFLYLKVGVN------------------- 758

Query: 382  ILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVV-RIVNLIGMMLLLCHWDGCLQFLVP 440
                  LLRL R ++Y+  +E    +   L+ A V R++     +L   H + CL +   
Sbjct: 759  -----PLLRLPRCLKYMAFFEFNSRLESILSKAYVYRVIRTTAYLLYSLHLNSCLYYWAS 813

Query: 441  MLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMI 500
              Q      WV       +  G  Y    + A+  ++ IG G   P  + ++   +L+  
Sbjct: 814  AYQGLGSTHWVY------DGVGNSYIRCYYFAVKTLITIG-GLPDPKTLFEIVFQLLNYF 866

Query: 501  VGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRYQ 560
             G   +++ IG    ++ +  + +  Y+       +YM+F+K+P   + R+  +YE+ + 
Sbjct: 867  TGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPKSVQNRVKTWYEYTWH 926

Query: 561  GK-MFDEESILGELSEPLREEI---INFNCRKLVASMPLFANADPNFVTSMLTKLRFEVF 616
             + M DE  ++ +L + +R ++   +N+N   +V+ + LF   D   +  ML +LR  V+
Sbjct: 927  SQGMLDESELMVQLPDKMRLDLAIDVNYN---IVSKVALFQGCDRQMIFDMLKRLRSVVY 983

Query: 617  QPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETK-----LADGSYFGEICLLTRG---R 668
             P DY+ ++G IG++MY IQ G V VL  G  + K     L  GS FGEI LL  G   R
Sbjct: 984  LPNDYVCKKGEIGREMYIIQAGQVQVL--GGPDGKSVLVTLKAGSVFGEISLLAVGGGNR 1041

Query: 669  RTASVRADTYCRLYSLSVDNFNEVLEEYP 697
            RTA+V A  +  L+ L   + NE+L  YP
Sbjct: 1042 RTANVVAHGFTNLFILDKKDLNEILVHYP 1070



 Score = 38.5 bits (88), Expect = 0.039
 Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 14/137 (10%)

Query: 890  PSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSPL--LTPLQPGARSPQAAQPSPAPPG 947
            P A TP    AA  + G      A GG L+   + L  L  L+  A+  +  + + +   
Sbjct: 1101 PRAGTPKLFNAALAMTGKMGGKGAKGGKLAHLRARLKELAALEAAAKQQELVEQAKSSQD 1160

Query: 948  ARG--GLGLPEHFLPP------PPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPR 999
             +G  G   P+    P      PP+ R+P   PG     P   SLG   G     E  P 
Sbjct: 1161 VKGEEGSAAPDQHTHPKEAATDPPAPRTPPEPPGSPPSSPPPASLGRPEG----EEEGPA 1216

Query: 1000 QPEPPSLVAGASGGASP 1016
            +PE  S+    S G  P
Sbjct: 1217 EPEEHSVRICMSPGPEP 1233



 Score = 36.6 bits (83), Expect = 0.15
 Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 26/136 (19%)

Query: 91   GDCRRFRGSLASLGSRGGGSGGTGSGSSH--------GHLHDSAEERRLIA--------- 133
            G  + F  +LA  G  GG  G  G   +H          L  +A+++ L+          
Sbjct: 1104 GTPKLFNAALAMTGKMGG-KGAKGGKLAHLRARLKELAALEAAAKQQELVEQAKSSQDVK 1162

Query: 134  --EGDASPGEDRTPPGLAAEPERPGASAQPAASPP--PPQ----QPPQPASASCEQPSVD 185
              EG A+P +   P   A +P  P    +P  SPP  PP     +P        E     
Sbjct: 1163 GEEGSAAPDQHTHPKEAATDPPAPRTPPEPPGSPPSSPPPASLGRPEGEEEGPAEPEEHS 1222

Query: 186  TAIKVEGGAAAGDQIL 201
              I +  G   G+QIL
Sbjct: 1223 VRICMSPGPEPGEQIL 1238


>gi|38569493 potassium voltage-gated channel, subfamily H
            (eag-related), member 3 [Homo sapiens]
          Length = 1083

 Score =  153 bits (387), Expect = 8e-37
 Identities = 224/938 (23%), Positives = 365/938 (38%), Gaps = 157/938 (16%)

Query: 211  AGFMQRQFGAMLQPGVNKFSLRMFGSQKAV-EREQERVKSAGFWIIHPYSDFRFYWDLTM 269
            +G +Q+Q       G +K +  +FG +  + E +   ++ + F ++H     R  WD  +
Sbjct: 178  SGHLQKQ-----PKGKHKLNKGVFGEKPNLPEYKVAAIRKSPFILLH-CGALRATWDGFI 231

Query: 270  LLLMVGNLIIIPVGITFFKDENTT----PWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTE 325
            LL  +   + +P  +        +    P  V ++  +  F++D+VLNFRT  V +   +
Sbjct: 232  LLATLYVAVTVPYSVCVSTAREPSAARGPPSVCDLAVEVLFILDIVLNFRTTFVSKSG-Q 290

Query: 326  IILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSL 385
            ++  P+ I + Y+ +WF++D I+++P D +           VY  A  L+ VR   +L L
Sbjct: 291  VVFAPKSICLHYVTTWFLLDVIAALPFDLLHAF-----KVNVYFGAHLLKTVR---LLRL 342

Query: 386  LRLL-RLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQ- 443
            LRLL RL R  +Y               SAVV +  L+ +  LL HW  C+ F +   + 
Sbjct: 343  LRLLPRLDRYSQY---------------SAVV-LTLLMAVFALLAHWVACVWFYIGQREI 386

Query: 444  -----DFPDDCW--------------VSINNMVNNSWGKQ-------------------- 464
                 + P+  W              V       NS G+                     
Sbjct: 387  ESSESELPEIGWLQELARRLETPYYLVGRRPAGGNSSGQSDNCSSSSEANGTGLELLGGP 446

Query: 465  -----YSYALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQS 519
                 Y  +L+ A+S +  +G+G  +    ++   ++ +M++GA  +A+  G+ TA+IQ 
Sbjct: 447  SLRSAYITSLYFALSSLTSVGFGNVSANTDTEKIFSICTMLIGALMHAVVFGNVTAIIQR 506

Query: 520  LDSSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRYQ-GKMFDEESILGELSEPLR 578
            + + R  Y  + + +  Y+  H++P   +QR+ +Y++  +      D   +L  L + LR
Sbjct: 507  MYARRFLYHSRTRDLRDYIRIHRIPKPLKQRMLEYFQATWAVNNGIDTTELLQSLPDELR 566

Query: 579  EEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHG 638
             +I   +  K V  +PLF  A    + ++   LR     PG+Y+I +G   + +YF+  G
Sbjct: 567  ADIA-MHLHKEVLQLPLFEAASRGCLRALSLALRPAFCTPGEYLIHQGDALQALYFVCSG 625

Query: 639  VVSVLTKGNKETKLADGSYFGEICLLTRGRRTASVRAD----TYCRLYSLSVDNFNEVLE 694
             + VL  G     L  G   G  C L R  +     AD    TYC L  L +   ++ L 
Sbjct: 626  SMEVLKGGTVLAILGKGDLIG--CELPRREQVVKANADVKGLTYCVLQCLQLAGLHDSLA 683

Query: 695  EYPMMRRAFETVALDRLDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAH 754
             YP     F              +  L  ++ ++L +G       E+    +  D  +  
Sbjct: 684  LYPEFAPRF--------------SRGLRGELSYNLGAG---GGSAEVDTSSLSGDNTLMS 726

Query: 755  CAHRVQAAASATPTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPR----LPAAIFRPPP 810
                 +      PT +P        +PL +   T+S + A    PR     P    R  P
Sbjct: 727  TLEEKETDGEQGPTVSPAP-ADEPSSPLLSPGCTSSSSAAKLLSPRRTAPRPRLGGRGRP 785

Query: 811  GSG---LGNLGAGQTPRHLKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQLAGFSA 867
            G         G    PR L+ L+  +P    +  P  SP  VD         Q    FS 
Sbjct: 786  GRAGALKAEAGPSAPPRALEGLR--LPPMPWNVPPDLSPRVVDGIEDGCGSDQ--PKFSF 841

Query: 868  PAGLSPLLPSSSSSPPP--GACGSPSAPTPSAGV--------AATTIAGFGHFHKALGGS 917
              G S    SSS SP P  G    P  P+ +           A T ++      +    S
Sbjct: 842  RVGQSGPECSSSPSPGPESGLLTVPHGPSEARNTDTLDKLRQAVTELSEQVLQMREGLQS 901

Query: 918  LSSSDSPLLTPLQPGARSPQAAQPSPAPPGARGGL-------GLPEHFLPPPPSSRSPSS 970
            L  +   +L P + G   P+A+   P P    G L       G   + L PP  S    +
Sbjct: 902  LRQAVQLVLAPHREGP-CPRASGEGPCPASTSGLLQPLCVDTGASSYCLQPPAGSVLSGT 960

Query: 971  SPGQLGQPPGELSLGLATGPLSTPETP-PR---------QPEPPSLVAGASGGASPVGFT 1020
             P     PP  L      GP ++  +P PR           EPP     ASG       T
Sbjct: 961  WPHPRPGPP-PLMAPWPWGPPASQSSPWPRATAFWTSTSDSEPP-----ASGDLCSEPST 1014

Query: 1021 PRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPAS 1058
            P    SPP    G  RT P+ P   + +  +   PP S
Sbjct: 1015 P---ASPPPSEEG-ARTGPAEPVSQAEATSTGEPPPGS 1048



 Score = 32.0 bits (71), Expect = 3.6
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 94  RRFRGSLASLGSRGGGSG--GTGSGSSHGHLHDSAEERRLIAEGDASPGEDRTPPGLAAE 151
           R  RG L+     GGGS    T S S    L  + EE+    +G+  P     P    + 
Sbjct: 694 RGLRGELSYNLGAGGGSAEVDTSSLSGDNTLMSTLEEKE--TDGEQGPTVSPAPADEPSS 751

Query: 152 PE-RPGASAQPAASP--PPPQQPPQPASASCEQPSVDTAIKVEGGAAAGDQIL 201
           P   PG ++  +A+    P +  P+P      +P    A+K E G +A  + L
Sbjct: 752 PLLSPGCTSSSSAAKLLSPRRTAPRPRLGGRGRPGRAGALKAEAGPSAPPRAL 804


>gi|26051271 voltage-gated potassium channel, subfamily H, member 2
           isoform b [Homo sapiens]
          Length = 888

 Score =  152 bits (384), Expect = 2e-36
 Identities = 104/418 (24%), Positives = 188/418 (44%), Gaps = 52/418 (12%)

Query: 253 WIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTT------------PWIVFNV 300
           W I  YS F+  WD  +LLL++   +  P    F   E               P  V ++
Sbjct: 398 WTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLKETEEGPPATECGYACQPLAVVDL 457

Query: 301 VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVE 360
           + D  F++D+++NFRT   V  N E++  P RI + Y K WF++D +++IP D +     
Sbjct: 458 IVDIMFIVDILINFRT-TYVNANEEVVSHPGRIAVHYFKGWFLIDMVAAIPFDLLIFGSG 516

Query: 361 TRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN 420
           +     + KTAR LR+VR  +        +L R   Y               +AV+ +  
Sbjct: 517 SEELIGLLKTARLLRLVRVAR--------KLDRYSEY--------------GAAVLFL-- 552

Query: 421 LIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSY------------- 467
           L+    L+ HW  C+ + +  ++    D  +   + + +  GK Y+              
Sbjct: 553 LMCTFALIAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYV 612

Query: 468 -ALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQ 526
            AL+   S +  +G+G  +P   S+   ++  M++G+  YA   G+ +A+IQ L S   +
Sbjct: 613 TALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTAR 672

Query: 527 YQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRYQ-GKMFDEESILGELSEPLREEIINFN 585
           Y  +  +V +++ FH++P   RQR+ +Y++H +      D  ++L    E L+ +I    
Sbjct: 673 YHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHL 732

Query: 586 CRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVL 643
            R L+     F  A    + ++  K +     PGD ++  G +   +YFI  G + +L
Sbjct: 733 NRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL 790


>gi|27886646 potassium voltage-gated channel, subfamily H, member 5
           isoform 3 [Homo sapiens]
          Length = 611

 Score =  150 bits (379), Expect = 7e-36
 Identities = 112/433 (25%), Positives = 192/433 (44%), Gaps = 46/433 (10%)

Query: 235 GSQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTP 294
           GS    + +QE  K+    I+H Y  F+  WD  +L+L     I++P  ++F   +N   
Sbjct: 188 GSDILPQYKQEAPKTPPHIILH-YCAFKTTWDWVILILTFYTAIMVPYNVSFKTKQNNIA 246

Query: 295 WIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDY 354
           W+V + V D  FL+D+VLNF T   V    E+I DP+ I+M YLK+WF++D +S +P D 
Sbjct: 247 WLVLDSVVDVIFLVDIVLNFHT-TFVGPGGEVISDPKLIRMNYLKTWFVIDLLSCLPYDI 305

Query: 355 IFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASA 414
           I       +D  +     +L++V         RLLRL R+ R +  + E        A+ 
Sbjct: 306 INAF--ENVDEGISSLFSSLKVV---------RLLRLGRVARKLDHYLEYG------AAV 348

Query: 415 VVRIVNLIGMMLLLCHWDGCLQFLV-------PMLQDFPDDCW-------VSINNMVNNS 460
           +V +V + G   L+ HW  C+ + +        +      D W       +      N S
Sbjct: 349 LVLLVCVFG---LVAHWLACIWYSIGDYEVIDEVTNTIQIDSWLYQLALSIGTPYRYNTS 405

Query: 461 WG---------KQYSYALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIG 511
            G           Y  +L+  M+ +  IG+G  AP    +   ++  M+VG+  YA   G
Sbjct: 406 AGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATIFG 465

Query: 512 HATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY-QGKMFDEESIL 570
           + T + Q + ++  +Y E    V  ++  +++P    +R+ DY    +   K  D E +L
Sbjct: 466 NVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVL 525

Query: 571 GELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGK 630
               + +R +I     RK+    P F  A    + ++  + +     PGD I   G    
Sbjct: 526 SICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVD 585

Query: 631 KMYFIQHGVVSVL 643
            + F+  G + V+
Sbjct: 586 ALCFVVSGSLEVI 598


>gi|116642889 cyclic nucleotide gated channel beta 3 [Homo sapiens]
          Length = 809

 Score =  140 bits (352), Expect = 9e-33
 Identities = 115/463 (24%), Positives = 205/463 (44%), Gaps = 52/463 (11%)

Query: 255 IHPYSDFRFY--WDLTMLLLMVGNLIIIPVGITFFKD--ENTTPWIVFNVVSDTFFLIDL 310
           I  Y+D R Y  W L + L    N   IP+ + F     +N   W++ +++ D  +L D+
Sbjct: 210 IDSYTD-RLYLLWLLLVTLAYNWNCCFIPLRLVFPYQTADNIHYWLIADIICDIIYLYDM 268

Query: 311 VLNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FMVDFISSIPVDYIFLIVETRIDSEVYK 369
           +   +  +      +II+D   ++  Y  S  F +D  S IP D  +L            
Sbjct: 269 LF-IQPRLQFVRGGDIIVDSNELRKHYRTSTKFQLDVASIIPFDICYLFFG--------- 318

Query: 370 TARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLC 429
                    F  +    R+L+ +    + H  E I    Y     + R++   G +L + 
Sbjct: 319 ---------FNPMFRANRMLKYTSFFEFNHHLESIMDKAY-----IYRVIRTTGYLLFIL 364

Query: 430 HWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIGYGRQAPVGM 489
           H + C+ +     +      WV       +  G +Y    + A+  ++ IG G   P  +
Sbjct: 365 HINACVYYWASNYEGIGTTRWVY------DGEGNEYLRCYYWAVRTLITIG-GLPEPQTL 417

Query: 490 SDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDTRQ 549
            ++   +L+   G   ++  IG    +I +  +++  ++        YM+ + +P   ++
Sbjct: 418 FEIVFQLLNFFSGVFVFSSLIGQMRDVIGAATANQNYFRACMDDTIAYMNNYSIPKLVQK 477

Query: 550 RIHDYYEHRYQG-KMFDEESILGELSEPLREEI---INFNCRKLVASMPLFANADPNFVT 605
           R+  +YE+ +   +M DE  +L  L   ++  +   +NF+   +++ + LF   D   + 
Sbjct: 478 RVRTWYEYTWDSQRMLDESDLLKTLPTTVQLALAIDVNFS---IISKVDLFKGCDTQMIY 534

Query: 606 SMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETK----LADGSYFGEI 661
            ML +L+  ++ PGD++ ++G IGK+MY I+HG V VL  G   TK    L  GS FGEI
Sbjct: 535 DMLLRLKSVLYLPGDFVCKKGEIGKEMYIIKHGEVQVL-GGPDGTKVLVTLKAGSVFGEI 593

Query: 662 CLLTRG---RRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRR 701
            LL  G   RRTA+V A  +  L +L      E+L  YP   R
Sbjct: 594 SLLAAGGGNRRTANVVAHGFANLLTLDKKTLQEILVHYPDSER 636


>gi|27886665 potassium voltage-gated channel, subfamily H, member 7
           isoform 2 [Homo sapiens]
          Length = 732

 Score =  136 bits (342), Expect = 1e-31
 Identities = 92/334 (27%), Positives = 163/334 (48%), Gaps = 49/334 (14%)

Query: 252 FWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDE-----------NTTPWIVFNV 300
           F I+H YS F+  WD  +LLL++   I  P    F  ++           + +P  V ++
Sbjct: 391 FTILH-YSPFKAVWDWLILLLVIYTAIFTPYSAAFLLNDREEQKRRECGYSCSPLNVVDL 449

Query: 301 VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFMVDFISSIPVDYIFLIVE 360
           + D  F+ID+++NFRT   V  N E++ DP +I + Y K WF++D +++IP D   LI  
Sbjct: 450 IVDIMFIIDILINFRT-TYVNQNEEVVSDPAKIAIHYFKGWFLIDMVAAIPFD--LLIFG 506

Query: 361 TRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN 420
           +  D               T ++ LL+  RL RL+R   + +      Y    A V ++ 
Sbjct: 507 SGSDET-------------TTLIGLLKTARLLRLVRVARKLDR-----YSEYGAAVLML- 547

Query: 421 LIGMMLLLCHWDGCLQFLV-----PMLQD---FPDDCWVSINNMVNNSWGK-------QY 465
           L+ +  L+ HW  C+ + +     P L D   + D     I    N+S          +Y
Sbjct: 548 LMCIFALIAHWLACIWYAIGNVERPYLTDKIGWLDSLGQQIGKRYNDSDSSSGPSIKDKY 607

Query: 466 SYALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRR 525
             AL+   S +  +G+G  +P   S+   ++  M++G+  YA   G+ +A+IQ L S   
Sbjct: 608 VTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTA 667

Query: 526 QYQEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY 559
           +Y  +  +V++++ FH++P   RQR+ +Y++H +
Sbjct: 668 RYHMQMLRVKEFIRFHQIPNPLRQRLEEYFQHAW 701


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 92.8 bits (229), Expect = 2e-18
 Identities = 125/490 (25%), Positives = 167/490 (34%), Gaps = 91/490 (18%)

Query: 760  QAAASATPTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPAAIFRPPPGSGLGNLGA 819
            + + +ATP P     TP    P       T    +L   P  PAA    P G        
Sbjct: 1044 KGSPAATPLPKGAPTTPAATLPSPKGGPATP---SLKGAPTPPAATPPSPKGGPATPSPK 1100

Query: 820  GQ------TPRHLKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSP 873
            G       TP   K   +  P      +PA++P    +P             + PA   P
Sbjct: 1101 GAPMPPAATPPSPKGGLATPPHKGAPTTPAATPP---SPKGGLATPPPKGAPTTPAATPP 1157

Query: 874  LLPSSSSSPPP-GACGSPSA--PTPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLTPLQ 930
                  ++PPP GA  +P+A  P+P  G+A  +  G             +  +P  TP  
Sbjct: 1158 SPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKG-------------APTTPAATPPS 1204

Query: 931  P----GARSPQAAQPSPA--PPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPPGELSL 984
            P       SP+ A  +PA  PP  +GGL  P     P   + +P S  G    PP +   
Sbjct: 1205 PKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPK--- 1261

Query: 985  GLATGPLSTPE-------TPPRQPEP-PSLVAGASGGASPVGFTPRGGLSPPGHSPGPPR 1036
            G  T P +TP        TPP +  P P++V   S    P    P+G  +PP  +P  P+
Sbjct: 1262 GAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPK 1321

Query: 1037 TFPSAPPRASGSHGSLLLPPASSPPPPQ--------VPQRRGTPPL-------TPGRLTQ 1081
              P  PP           PPA +PP P+         P  +G P         TP   T 
Sbjct: 1322 GSPGTPPPKGAP-----TPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATP 1376

Query: 1082 DLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGS------GGSGSSGGL 1135
              K   A  P  P+ G       SP     S A  PL P+    +        + S G L
Sbjct: 1377 SHKGGPAMTPPSPKRGPAI---PSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDL 1433

Query: 1136 GPP-----------------GRPYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGP 1178
             PP                 G P         TLP  T      PP     A ++S    
Sbjct: 1434 TPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKA 1493

Query: 1179 PLTAGPQREP 1188
            P T  P   P
Sbjct: 1494 PATPAPMGAP 1503



 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 128/490 (26%), Positives = 174/490 (35%), Gaps = 108/490 (22%)

Query: 764  SATPTPTPVIWTPLIQAPLQ--AAAATTSVAIALTHHPRLPAAIF--------RPP---- 809
            S T    PV  +P  + P +   A+AT S    LT+    P+ +         RPP    
Sbjct: 755  SHTSALAPVASSPK-ECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKG 813

Query: 810  ---PGSGLGNLGAGQTPRHLKRLQSLIPSALGSA-SPASSPSQVDTPSSSSFHIQQLAGF 865
               P + +GNL +  +P     L     S  GS  SPA++ S   TP S         G 
Sbjct: 814  SAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSP--TPPSPK-------GA 864

Query: 866  SAPAGLSPLLPSSSSSPP-----------PGACGSPSAPTPSAGVAATTIAGFGHFHKAL 914
              P+ ++PL P   + PP           P     P+ P P    A +  +      +A 
Sbjct: 865  PTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARAT 924

Query: 915  GG--SLSSSDSPLLTPLQPGARSPQA----AQPSP---------APPGARGGLGLPEHFL 959
                 + +S SP   P  P A  P      A PSP          PP  +GG   P    
Sbjct: 925  PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKG 984

Query: 960  PPPPSSRSPSSSPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGF 1019
             P P + +P S  G    P  +   G  T P  TP +P   P            A+P   
Sbjct: 985  APTPPAATPPSPKGGPATPSPK---GAPTPPAVTPPSPKGSP-----------AATPF-- 1028

Query: 1020 TPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPP---PQVPQRRGTPPLTP 1076
             P+G  +PP  +P  P+  P+A P   G+  +   P A+ P P   P  P  +G P  TP
Sbjct: 1029 -PKGASTPPAATPPSPKGSPAATPLPKGAPTT---PAATLPSPKGGPATPSLKGAP--TP 1082

Query: 1077 GRLTQDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAG------------G 1124
                       A+ P  P+ G  T    SP  +    AA P  P+ G             
Sbjct: 1083 ----------PAATPPSPKGGPAT---PSPKGAPMPPAATPPSPKGGLATPPHKGAPTTP 1129

Query: 1125 GSGGSGSSGGLGPPGRPYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTAGP 1184
             +      GGL  P  P GA      T P      + PPP    GA  T +  PP   G 
Sbjct: 1130 AATPPSPKGGLATP-PPKGAPTTPAATPPSPKGGLATPPPK---GAPTTPAATPPSPKGG 1185

Query: 1185 QREPGARPEP 1194
               P  +  P
Sbjct: 1186 LATPSPKGAP 1195



 Score = 78.6 bits (192), Expect = 3e-14
 Identities = 123/467 (26%), Positives = 172/467 (36%), Gaps = 83/467 (17%)

Query: 765  ATPTPTPVIWTPLIQAPL-QAAAATTSVAIALTHHPRLPAAIFRPPPGSGLGNLGAGQTP 823
            ATP+P      P    P  +   AT S   A T     P A+  P P    G+  A   P
Sbjct: 978  ATPSPKGAPTPPAATPPSPKGGPATPSPKGAPT-----PPAVTPPSPK---GSPAATPFP 1029

Query: 824  RHLKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSPP 883
            +      +  P +    SPA++P     P++ +  +    G  A   L    P+  ++ P
Sbjct: 1030 KGASTPPAATPPS-PKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGA-PTPPAATP 1087

Query: 884  PGACGSPSAPTPSAGV---AATTIAGFGHFHKALGGSLSSSDSPLLTPLQP----GARSP 936
            P   G P+ P+P       AAT  +  G    A      +  +P  TP  P        P
Sbjct: 1088 PSPKGGPATPSPKGAPMPPAATPPSPKGGL--ATPPHKGAPTTPAATPPSPKGGLATPPP 1145

Query: 937  QAAQPSPA--PPGARGGLGLPEHFLPP------PPSSRSPSSSPGQLGQP------PGEL 982
            + A  +PA  PP  +GGL  P     P      PPS +   ++P   G P      P   
Sbjct: 1146 KGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSP 1205

Query: 983  SLGLAT----GPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTF 1038
              GLAT    G  +TP   P  P+         G A+P   +P+G  + P  +P  P+  
Sbjct: 1206 KGGLATPSPKGAPTTPAATPPSPK--------GGLATP---SPKGAPTTPAATPPSPKGG 1254

Query: 1039 PSAPPRASGSHGSLLLPPASSPPPPQ----VPQRRGTPPLTPGRLTQDLKLISASQPALP 1094
            P+ PP           PPA++PP  +     P  +G P   P  +T          P  P
Sbjct: 1255 PATPPPKGAP-----TPPAATPPSLKGGLATPPHKGAP--NPAVVT----------PPSP 1297

Query: 1095 QDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGRPYGAIPGQHVTLPR 1154
            + G  T   + P  +    AA P  P+   GS G+    G   P       P    TLP 
Sbjct: 1298 KGGPAT---SPPKGAPTPPAATPPSPK---GSPGTPPPKGAPTPPAVTPPSPKGTPTLPA 1351

Query: 1155 KT--SSGSLPPPLSLFG-----ARATSSGGPPLTAGPQREPGARPEP 1194
             T  S G    P S  G     A  +  GGP +T    +   A P P
Sbjct: 1352 TTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSP 1398



 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 112/439 (25%), Positives = 156/439 (35%), Gaps = 109/439 (24%)

Query: 832  LIPSALGSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSP-------PP 884
            L+P+A  +   A SP     P ++               L+P +P S  SP       PP
Sbjct: 700  LVPTASENCPVAPSPQNTCAPLATLV-------------LAPEIPKSVPSPSLPPAGTPP 746

Query: 885  G----------------ACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLTP 928
            G                A      PT  +G +AT  +      K     L+ S SPL   
Sbjct: 747  GTKKVDGISHTSALAPVASSPKECPTEDSGASATASS------KGTLTYLADSPSPLGVS 800

Query: 929  LQPGARSPQAAQPSPAPPGARGGLG----------LPEHFL--------------PPPPS 964
            + P  + P   + S  P    G L           LPE+ L              P PPS
Sbjct: 801  VSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPS 860

Query: 965  SR---SPSS----SPGQLGQPPGEL---SLGLATGPLSTPETP-PRQPEPPSLVAGASGG 1013
             +   +PS+    SP  +  PP E    S+     P   P TP P+Q    S+ + +   
Sbjct: 861  PKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKK 920

Query: 1014 AS--------PVGFTPRGGLSPPGHSPGPPRTFPSAP-PRASGSHGSLLLPPASSPPPPQ 1064
            A         P   +P+G  +PP  +P  P+  P+ P P+ + +      PPA++PP P+
Sbjct: 921  ARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPT------PPAATPPSPK 974

Query: 1065 ----VPQRRGTPPLTPGRLTQDLKLISASQPALPQ-DGAQTLRRASPHSSGESMAAFPLF 1119
                 P  +G P  TP   T          PA P   GA T    +P S   S AA P F
Sbjct: 975  GGPATPSPKGAP--TPPAATPP---SPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP-F 1028

Query: 1120 PRAGGGSGGSGSSGGLGPPGR---PYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSG 1176
            P+       +      G P     P GA      TLP      + P   SL GA    + 
Sbjct: 1029 PKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATP---SLKGAPTPPAA 1085

Query: 1177 GPPLTAGPQREPGARPEPV 1195
             PP   G    P  +  P+
Sbjct: 1086 TPPSPKGGPATPSPKGAPM 1104



 Score = 63.9 bits (154), Expect = 9e-10
 Identities = 82/349 (23%), Positives = 116/349 (33%), Gaps = 44/349 (12%)

Query: 765  ATPTPTPVIWTPLIQAPL-QAAAATTSVAIALTHHPRLPAAI---FRPPPGSGLGNLGAG 820
            ATP+P     TP    P  +   AT     A T     P ++      PP  G  N    
Sbjct: 1233 ATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVV 1292

Query: 821  QTPRHLKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPLLPSSSS 880
              P       +  P    +   A+ PS   +P +         G   P  ++P  P  + 
Sbjct: 1293 TPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPP-----PKGAPTPPAVTPPSPKGTP 1347

Query: 881  SPPPGACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLTPLQPGARS----- 935
            + P     S   PT  +     T       HK  GG   +  SP   P  P  +      
Sbjct: 1348 TLPATTPSSKGGPTTPSSKEGPTPPAATPSHK--GGPAMTPPSPKRGPAIPSPKGDPTSP 1405

Query: 936  ---PQAAQPSPAPPGARGGLGLPEH--FLPP---PPSSRSPSSSPGQLGQPPGELSLGLA 987
               P + + +PA P  R G   P      PP   P S +   ++    G P    S G  
Sbjct: 1406 AVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDP 1465

Query: 988  TGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPR--- 1044
            T P  TP +P   P P  +   +S   +P    P G  + P   P  P+  P+ P     
Sbjct: 1466 TLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRD 1525

Query: 1045 --------------ASGSHGSLLLPPASSPPPPQVPQRRGTP---PLTP 1076
                          A+ +    L+PPA + P P+      TP   P TP
Sbjct: 1526 PIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATP 1574



 Score = 63.9 bits (154), Expect = 9e-10
 Identities = 96/421 (22%), Positives = 142/421 (33%), Gaps = 57/421 (13%)

Query: 808  PPPGSGLGNLGAGQTPRHLKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQLAGFSA 867
            PP G+         +P+    L +  PS+ G  +  SS      P+++  H    A    
Sbjct: 1328 PPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPP 1387

Query: 868  PAGLSPLLPSSSSSPPPGACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLT 927
                 P +PS    P   A      P       AT +   G    + G     + +P+  
Sbjct: 1388 SPKRGPAIPSPKGDPTSPAV----IPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSL 1443

Query: 928  PLQPGARSPQAAQPSPAPPGARGGLGLP-----EHFLPPPPSSRSPSSSPGQLGQPPGEL 982
               P   +P+     PA P ++G   LP         PP P   + SSSP +    P  +
Sbjct: 1444 KKAPATSAPKGG---PATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPM 1500

Query: 983  SLG-----LATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRT 1037
                    + + P   P TP  + +P +  A      +P    P+  L PP  +   P+ 
Sbjct: 1501 GAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKK 1560

Query: 1038 FP-----------------SAPP-------RASGSHGSLLLPPA-SSPPPPQVPQRRGTP 1072
             P                 S+PP       + + S   LL+PPA +SP P + P      
Sbjct: 1561 TPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVT 1620

Query: 1073 PLTP--GRLTQDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSG 1130
            P +P  G  T   K    S P  P     +    SP S    M A    P+A  G     
Sbjct: 1621 PPSPEKGPATPAPKGTPTSPPVTPSSLKDS--PTSPASVTCKMGA--TVPQASKGLPAKK 1676

Query: 1131 SSGGL-------GPPGRPYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTAG 1183
                L        P   P    P +     +K+S+ S  PP+    +    S GP  T  
Sbjct: 1677 GPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATS--PPICPDPSAKNGSKGPLSTVA 1734

Query: 1184 P 1184
            P
Sbjct: 1735 P 1735



 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 90/365 (24%), Positives = 132/365 (36%), Gaps = 74/365 (20%)

Query: 760  QAAASATPTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPAAIFRPPPGSGLGNLGA 819
            Q A S++P   P   TP   AP+ A      +  +    P  P++  R  P +    L +
Sbjct: 1483 QVATSSSPKKAPA--TP---APMGAPTLPAVIPSSPKEVPATPSS--RRDPIAPTATLLS 1535

Query: 820  GQTPRHLKRLQSLIPSALGSASPASSPSQVDTP-----------SSSSFHIQQLAGFSAP 868
             +TP  L   ++LIP A+   SP  +P+ + TP           +SS   +       AP
Sbjct: 1536 KKTPATLAPKEALIPPAMTVPSPKKTPA-IPTPKEAPATPSSKEASSPPAVTPSTYKGAP 1594

Query: 869  AGLSPLLPSSSSSPPPGACGSPSA---PTPSAGVAATTIAGFGHFHKALGGSLSSSD-SP 924
            +    L+P + +SP P    +P A   P+P  G A     G          SL  S  SP
Sbjct: 1595 SPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSP 1654

Query: 925  LLTPLQPGARSPQAAQPSPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQP------ 978
                 + GA  PQA++  PA    +G   L E  + P P S    ++P + G        
Sbjct: 1655 ASVTCKMGATVPQASKGLPAK---KGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSA 1711

Query: 979  ------PGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPP---- 1028
                  P   +   + GPLST    P  P        A G       +P+G L+PP    
Sbjct: 1712 TSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKG--KDASHSPKGPLAPPESKA 1769

Query: 1029 ---------------------GHSPGPPRTFP-------SAPPRAS--GSHGSLLLPPAS 1058
                                   +P PP + P       + PP+     S   L+L   S
Sbjct: 1770 STPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPS 1829

Query: 1059 SPPPP 1063
             P  P
Sbjct: 1830 KPLAP 1834



 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 81/320 (25%), Positives = 116/320 (36%), Gaps = 66/320 (20%)

Query: 761  AAASATPTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPAAIFRPP-PGSGLGN-LG 818
            +  +A   P P +  P   AP Q   +  + A        + +     P P S  G  L 
Sbjct: 33   SVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALP 92

Query: 819  AGQTPRHLKRLQSLI-----PSALGSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSP 873
             G  P     L +LI     P+AL  ASP  +P+   TPSS           SAP  L  
Sbjct: 93   LGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSS-----------SAPLALVA 141

Query: 874  LLPSS---SSSPPPGACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLTPLQ 930
            L P S   SS+ PP    SP    PS  VA +             GS+ +  +P + P +
Sbjct: 142  LAPHSVQKSSAFPPNLLTSP----PSVAVAES-------------GSVITLSAP-IAPSE 183

Query: 931  PGARSPQAAQPSPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPPGELSLGLATGP 990
            P     +   PS   P  +G         P PP     S+ P     P   +  G+A+ P
Sbjct: 184  PKTNLNKV--PSEVVPNPKG--------TPSPPC--IVSTVPYHCVTPMASIQSGVASLP 231

Query: 991  LSTPET----PPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGH-----------SPGPP 1035
             +TP T       Q +  ++ +      +P   + +G +SPP             +    
Sbjct: 232  QTTPTTTLAIASPQVKDTTISSVLISPQNPGSLSLKGPVSPPAALSLSTQSLPVVTSSQK 291

Query: 1036 RTFPSAPPRASGSHGSLLLP 1055
               P+ PP    S GS L P
Sbjct: 292  TAGPNTPPDFPISLGSHLAP 311



 Score = 40.8 bits (94), Expect = 0.008
 Identities = 73/294 (24%), Positives = 101/294 (34%), Gaps = 62/294 (21%)

Query: 931  PGARSPQAAQPSPAPPGARGGLGLPEHFLPPPPS------------SRSPSSSPGQLGQP 978
            P  ++  A  P  +       LG P   LPPP S              SP  SP  +   
Sbjct: 17   PQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIAST 76

Query: 979  PGEL-----SLGLATGPLSTPETPPRQPE---PP--------------SLVAGASGGASP 1016
            P E+     S G A    + PE P   P    PP                + G    ++P
Sbjct: 77   PLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAP 136

Query: 1017 VGFTPRGGLSPPGHSPGPPRTFPSAPPRA---SGSHGSLLLPPASSPPPPQ--------V 1065
            +        S    S  PP    S P  A   SGS  +L  P A S P           V
Sbjct: 137  LALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVV 196

Query: 1066 PQRRGTP------PLTPGRLTQDLKLISASQPALPQ-DGAQTLRRASPHSSGESMAAFPL 1118
            P  +GTP         P      +  I +   +LPQ     TL  ASP     ++++  +
Sbjct: 197  PNPKGTPSPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTTISSVLI 256

Query: 1119 FPRAGGGSGGSGSSGGLGPPGR---PYGAIPGQHVTLPRKTSSGSLPP--PLSL 1167
             P+     G     G + PP        ++P   VT  +KT+  + PP  P+SL
Sbjct: 257  SPQ---NPGSLSLKGPVSPPAALSLSTQSLP--VVTSSQKTAGPNTPPDFPISL 305



 Score = 36.2 bits (82), Expect = 0.19
 Identities = 40/172 (23%), Positives = 57/172 (33%), Gaps = 19/172 (11%)

Query: 52   PLPSPSPSAAAGGTESRSSALGAADSEGPARGAGKSSTNGDCRRFRGSLASLGSRGGGSG 111
            P P  +P+  A    S+      +  EGP   A   S  G       S     +     G
Sbjct: 1341 PSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKG 1400

Query: 112  GTGSGSSHGHLHDSAEERRLIAEGDASPGE-DRTPPGLA-----------------AEPE 153
               S +        A    +  EG A+P + D TPP +                  A P 
Sbjct: 1401 DPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPS 1460

Query: 154  RPGASAQPAASPPPPQQPPQPAS-ASCEQPSVDTAIKVEGGAAAGDQILPEA 204
              G    PA +PP P++PP P   A+   P    A     GA     ++P +
Sbjct: 1461 SKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSS 1512



 Score = 35.4 bits (80), Expect = 0.33
 Identities = 51/189 (26%), Positives = 69/189 (36%), Gaps = 25/189 (13%)

Query: 765  ATPTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPAAIFRPPPGSGLGNLGAGQTPR 824
            +T  P P++       P+Q  ++ T+     +H P+ P A   PP       L A    +
Sbjct: 1731 STVAPAPLL-------PVQKDSSKTAKGKDASHSPKGPLA---PPESKASTPLTAAAFEK 1780

Query: 825  HLKRLQSLIPSALGSAS----------PASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPL 874
             L + +S   SA  S            P   P Q   PSS    ++  +   APA    L
Sbjct: 1781 VLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDEL 1840

Query: 875  LPSSSSSPPPGACGSPSA----PTP-SAGVAATTIAGFGHFHKALGGSLSSSDSPLLTPL 929
            LP     P  G     S     PTP SAG+   T +      K   GS + SDS    P 
Sbjct: 1841 LPLIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPE 1900

Query: 930  QPGARSPQA 938
                 S QA
Sbjct: 1901 LEEQDSTQA 1909



 Score = 34.3 bits (77), Expect = 0.73
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 145 PPGLAAEPERPGASAQPAASPPPPQ-QPPQPASASCEQPSVDTAIKVEGGAA 195
           P G+ A P   GA   PAA+PP P+  P  P+      P   T    +GG A
Sbjct: 927 PKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPA 978



 Score = 33.5 bits (75), Expect = 1.3
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 144  TPPGLAAEPERPGASAQPAASPPPPQ-QPPQPASASCEQPSVDTAIKVEGGAA 195
            +P G  A P   GA   PAA+PP P+  P  P+      P   T    +GG A
Sbjct: 1066 SPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLA 1118



 Score = 33.5 bits (75), Expect = 1.3
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 144  TPPGLAAEPERPGASAQPAASPPPPQ-QPPQPASASCEQPSVDTAIKVEGGAA 195
            +P G  A P   GA   PAA+PP P+  P  P       P   T   ++GG A
Sbjct: 1227 SPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLA 1279



 Score = 32.0 bits (71), Expect = 3.6
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 144  TPPGLAAEPERPGASAQPAASPPPPQ-QPPQPASASCEQPSVDTAIKVEGGAAA 196
            +P G  A P   GA   PAA+PP P+  P  P+      P   T    +G  AA
Sbjct: 972  SPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAA 1025


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 85.5 bits (210), Expect = 3e-16
 Identities = 96/351 (27%), Positives = 118/351 (33%), Gaps = 57/351 (16%)

Query: 864  GFSAPAGLSPLLPSSSSSPPPGACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDS 923
            G + P G  P  P     PPP     P  P P          G              S S
Sbjct: 64   GGNQPQGPPPP-PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG------------DKSRS 110

Query: 924  PLLTPLQPGARSPQAA---QPSPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQ---LGQ 977
            P   P +P    PQ     Q  P PPG   G        PPP     P   P      G 
Sbjct: 111  PRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG--------PPPQGGNKPQGPPPPGKPQGP 162

Query: 978  PP-GELSLGLATGPLSTPETPP----RQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSP 1032
            PP G+     +  P   P+ PP     QP+ P    G   G  P G     G  PPG   
Sbjct: 163  PPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ 222

Query: 1033 GPP-------RTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQDLKL 1085
            GPP       ++  S P +  G        P   PPPP  PQ    PP   G   Q    
Sbjct: 223  GPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQ---GPPPQGGNKPQGPPP 279

Query: 1086 ISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGRPYGAI 1145
                Q   PQ G+++    SP          P  P+     GG+   G   PPG+P G  
Sbjct: 280  PGKPQGPPPQGGSKSRSSRSP----------PGKPQGPPPQGGNQPQGPPPPPGKPQGPP 329

Query: 1146 P--GQHVTLPRKTSSGSLPPPLSLFGARATSSGGPP-LTAGPQREPGARPE 1193
            P  G     P        PPP    G+++ S+  PP    GP ++ G  P+
Sbjct: 330  PQGGNKPQGPPPPGKPQGPPPQG--GSKSRSARSPPGKPQGPPQQEGNNPQ 378



 Score = 64.7 bits (156), Expect = 5e-10
 Identities = 81/292 (27%), Positives = 92/292 (31%), Gaps = 33/292 (11%)

Query: 808  PPPGSGLGNLGAGQTPRHLKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQLAGFSA 867
            PPPG        G  P+   + Q   P       P   P Q D  S SS           
Sbjct: 134  PPPGKP-----QGPPPQGGNKPQGPPPPG----KPQGPPPQGDNKSRSSRSPPGKPQGPP 184

Query: 868  PAGLS-----PLLPSSSSSPPPGACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSD 922
            P G +     P  P     PPP     P  P P          G      A         
Sbjct: 185  PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQG 244

Query: 923  SPLLTPLQPGARSPQAAQPS-PAPPGARGGLGLPEHFLP--PPPS----SRSPSSSPGQL 975
             P     QP    P   +P  P P G     G P    P  PPP     SRS  S PG+ 
Sbjct: 245  PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKP 304

Query: 976  GQPP---GELSLGLATGPLSTPETPPRQ----PEPPSLVAGASGGASPVGFTPRGGLSPP 1028
              PP   G    G    P   P+ PP Q    P+ P       G     G   R   SPP
Sbjct: 305  QGPPPQGGNQPQGPPPPP-GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPP 363

Query: 1029 GHSPGPPRTFPS----APPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTP 1076
            G   GPP+   +     PP A G+      PPA  P  P  P + G P   P
Sbjct: 364  GKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 415



 Score = 60.8 bits (146), Expect = 7e-09
 Identities = 79/292 (27%), Positives = 97/292 (33%), Gaps = 68/292 (23%)

Query: 914  LGGSLSSSDSPLLTPLQPGARSPQAA---QPSPAPPGARGGLGLPEHFLPPPPSSRSPSS 970
            L   +S  +SP L    P    PQ     Q  P+PPG   G        PPP     P  
Sbjct: 19   LNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQG--------PPPQGGNQPQG 70

Query: 971  SPGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGH 1030
             P     PPG+            P+ PP Q           GG  P G        PPG 
Sbjct: 71   PP----PPPGK------------PQGPPPQ-----------GGNKPQG------PPPPGK 97

Query: 1031 SPGPP------RTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQDLK 1084
              GPP      R+  S P +  G        P   PPPP  PQ    PP   G   Q   
Sbjct: 98   PQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ---GPPPQGGNKPQGPP 154

Query: 1085 LISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGRPYGA 1144
                 Q   PQ   ++    SP          P  P+     GG+   G   PPG+P G 
Sbjct: 155  PPGKPQGPPPQGDNKSRSSRSP----------PGKPQGPPPQGGNQPQGPPPPPGKPQGP 204

Query: 1145 IP--GQHVTLPRKTSSGSLPPPLSLFGARATSSGGPP-LTAGPQREPGARPE 1193
             P  G     P        PPP      ++ S+  PP    GP  + G +P+
Sbjct: 205  PPQGGNKPQGPPPPGKPQGPPPQG--DNKSQSARSPPGKPQGPPPQGGNQPQ 254



 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 63/209 (30%), Positives = 76/209 (36%), Gaps = 37/209 (17%)

Query: 1000 QPEPPSLVAGASGGASPVGFT-PRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPAS 1058
            Q E PSL+AG   GA P G   P+G  SPPG   GP       PP+           P  
Sbjct: 25   QEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGP-------PPQGGNQ-------PQG 70

Query: 1059 SPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPL 1118
             PPPP  PQ    PP   G   Q        Q   PQ       R+ P            
Sbjct: 71   PPPPPGKPQ---GPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGK---------- 117

Query: 1119 FPRAGGGSGGSGSSGGLGPPGRPYGAIP--GQHVTLPRKTSSGSLPPPLSLFGARATSS- 1175
             P+     GG+   G   PPG+P G  P  G     P        PPP     +R++ S 
Sbjct: 118  -PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSP 176

Query: 1176 ----GGPPLTAGPQREPGARPEPVRSKLP 1200
                 GPP   G Q + G  P P + + P
Sbjct: 177  PGKPQGPPPQGGNQPQ-GPPPPPGKPQGP 204



 Score = 34.3 bits (77), Expect = 0.73
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 134 EGDASPGEDRTPPGLAAEPERPGASAQPAASPPPPQQPPQPASASCEQP 182
           +GD      R+PPG    P   G + QP   PPPP +P  P      +P
Sbjct: 165 QGDNKSRSSRSPPGKPQGPPPQGGN-QPQGPPPPPGKPQGPPPQGGNKP 212



 Score = 33.5 bits (75), Expect = 1.3
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 134 EGDASPGEDRTPPGLAAEPERPGASAQPAASPPPPQQPPQPASASCEQP 182
           +GD      R+PPG    P   G + QP   PPPP +P  P      +P
Sbjct: 227 QGDNKSQSARSPPGKPQGPPPQGGN-QPQGPPPPPGKPQGPPPQGGNKP 274



 Score = 32.7 bits (73), Expect = 2.1
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 134 EGDASPGEDRTPPGLAAEPERPGASAQPAASPPPPQQPPQPASASCEQP 182
           +G +     R+PPG    P   G + QP   PPPP +P  P      +P
Sbjct: 289 QGGSKSRSSRSPPGKPQGPPPQGGN-QPQGPPPPPGKPQGPPPQGGNKP 336



 Score = 32.7 bits (73), Expect = 2.1
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 6/65 (9%)

Query: 134 EGDASPGEDRTPPGLAAEPERPGASAQPAASPPP------PQQPPQPASASCEQPSVDTA 187
           +G   PG+ + PP       R   S       PP      PQ PP PA  + +QP    A
Sbjct: 337 QGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA 396

Query: 188 IKVEG 192
            + +G
Sbjct: 397 GQPQG 401



 Score = 32.0 bits (71), Expect = 3.6
 Identities = 32/116 (27%), Positives = 41/116 (35%), Gaps = 7/116 (6%)

Query: 1085 LISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGRPYGA 1144
            LI  S   L    AQ L          S+ A    P+     GG+   G   PPG+P G 
Sbjct: 3    LILLSVALLALSSAQNLNEDVSQEESPSLIAGN--PQGAPPQGGNKPQGPPSPPGKPQGP 60

Query: 1145 IPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTAGPQREPGARPEPVRSKLP 1200
             P Q    P+    G  PPP    G        P     P +  G  P+  +S+ P
Sbjct: 61   -PPQGGNQPQ----GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSP 111



 Score = 31.6 bits (70), Expect = 4.8
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 134 EGDASPGEDRTPPGLAAEPERPGASAQPAASPPPPQQPPQPASASCEQP 182
           +GD S    R+PPG    P   G + QP   PPPP +P  P      +P
Sbjct: 104 QGDKSRSP-RSPPGKPQGPPPQGGN-QPQGPPPPPGKPQGPPPQGGNKP 150



 Score = 30.8 bits (68), Expect = 8.1
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 134 EGDASPGEDRTPPGLAAEPERPGASAQPAASPPPPQQPPQPASASCEQP 182
           +G   P    +PPG    P   G + QP   PPPP +P  P      +P
Sbjct: 42  QGGNKPQGPPSPPGKPQGPPPQGGN-QPQGPPPPPGKPQGPPPQGGNKP 89


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
          Length = 855

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 126/469 (26%), Positives = 170/469 (36%), Gaps = 73/469 (15%)

Query: 744  QIVQHDREMAHCAHRVQAAASATPTPTPVIWT---PLIQAPLQAAAATTSVAIALTHHPR 800
            Q+    ++ A     + ++  ATP+P+  + +   P + A   +++ T  +A  L   P 
Sbjct: 284  QVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPP 343

Query: 801  LPAAIFRPPPGSGLGNLGAGQTPRHLKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQ 860
             P+A   PP    L +  A    +    L S    A  S  P+   S + TP   +    
Sbjct: 344  SPSA---PPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPAL 400

Query: 861  QLAGFSAPAGLSPLLPSSSSSPPPGACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSS 920
             L    AP       PS  +SPP     +PS   P+A       A F             
Sbjct: 401  ALPPLQAP-------PSPPASPPLSPLATPSPQAPNALAVHLLQAPFS----------PP 443

Query: 921  SDSPLLTPLQPGAR---SPQAAQPSPAPPGARGGLGLPEHFLPP-PPSS--RSPSSSPG- 973
               P+  P  P A    SP A  PS APP     L  P   +PP PP+S   SPS++P  
Sbjct: 444  PSPPVQAPFSPPASPPVSPSATPPSQAPPS----LAAPPLQVPPSPPASPPMSPSATPPP 499

Query: 974  -----------QLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPVGFTPR 1022
                       QL +PP +    LAT PL    +PP           +  G +P  F+P 
Sbjct: 500  QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPP----------ASFPGQAP--FSPS 547

Query: 1023 GGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPP--QVPQRRGTPPLTPGRLT 1080
              L P      PP   P APP  +     LL  P S P  P  Q P+R  TP        
Sbjct: 548  ASL-PMSPLATPP---PQAPPVLA---APLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG 600

Query: 1081 QDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGR 1140
              L L  A  P  P   + +   + P  +G S +A        G   G        PP  
Sbjct: 601  PRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP-- 658

Query: 1141 PYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTAGPQREPG 1189
            P   +   H   P   S G   PPL+  GA       PP T GP    G
Sbjct: 659  PDAELAACH---PAAWSRGP-APPLAFRGAPGAPLPWPPAT-GPGSADG 702



 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 119/438 (27%), Positives = 157/438 (35%), Gaps = 72/438 (16%)

Query: 807  RPPPGSGLG-NLGAGQTPRHLKRLQSLIPSAL--GSASPASSPSQVDTPSSSSFHIQQLA 863
            RP P    G  + A +T    K  ++   SAL  G+    S P+   TPS +     + A
Sbjct: 125  RPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTP-GTPSPAMARRSRAA 183

Query: 864  GFSAPAGLSPLLPSSSSSPPP-------GACGSPSAPTPSAGVAATTIAGFGHFHKALGG 916
            G     GL    PS+   PP         +    S   PS        AG G   +    
Sbjct: 184  G--TEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG-GGLQRPASR 240

Query: 917  SLSSSDSPLLTPLQ--PGARSPQAAQPSPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQ 974
            SLSSS +PL +P +  P AR    A   P+ P  +G   L    + PP    +P+  P  
Sbjct: 241  SLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP-- 298

Query: 975  LGQPPGELSLGLATGPLSTP--------ETPPRQPEPPSLVAGASGGASPVGFTPRGGLS 1026
                       L++ PL+TP        + PP  P  P   +     A+P+   P    +
Sbjct: 299  -----------LSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSA 347

Query: 1027 PPGHS--PGPPRTFPS------APPRASGSHGSLLLPPAS--SPPPPQVPQRRGTPPL-- 1074
            PP     P PP T PS        P    +H  L  PP S  + PPPQ P     PPL  
Sbjct: 348  PPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQA 407

Query: 1075 -TPGRLTQDLKLISASQPALPQDGAQTLRRA--SPHSSGESMAAF------PLFPRAGGG 1125
                  +  L  ++   P  P   A  L +A  SP  S    A F      P+ P A   
Sbjct: 408  PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 467

Query: 1126 SGGSGSSGGLGPPGRPYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTAG-- 1183
            S    S     PP +   + P      P  T     PPPL+           PPL     
Sbjct: 468  SQAPPSLA--APPLQVPPSPPASPPMSPSATPPPQAPPPLA----------APPLQLAKP 515

Query: 1184 PQREPGARPEPVRSKLPS 1201
            P + P A   P    LPS
Sbjct: 516  PPQAPPALATPPLQALPS 533



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 114/443 (25%), Positives = 154/443 (34%), Gaps = 88/443 (19%)

Query: 765  ATPTPT--PVIWTPLIQAPLQAAAATTSVAIALTHHPRLPAAI--------FRPPPGSGL 814
            ATP P   P +  P +QAP    A+     +A T  P+ P A+        F PPP   +
Sbjct: 390  ATPPPQAPPALALPPLQAPPSPPASPPLSPLA-TPSPQAPNALAVHLLQAPFSPPPSPPV 448

Query: 815  GNLGAGQTPRHLKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQLAGFSAPAGLSPL 874
                  Q P          P A    SP+++P     PS ++  +Q      A   +SP 
Sbjct: 449  ------QAP--------FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS 494

Query: 875  LPSSSSSPPPGACG--SPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLTPLQPG 932
                  +PPP A      + P P A  A  T        +AL    +S   P   P  P 
Sbjct: 495  ATPPPQAPPPLAAPPLQLAKPPPQAPPALATPP-----LQALPSPPASF--PGQAPFSPS 547

Query: 933  ARSPQAAQPSPAPPGARGGLGLPEHFLPP-PPSS-------RSPSSSPGQLGQPPGELSL 984
            A  P +   +P PP A   L  P   +PP PP+S       R P+  P      P  L+L
Sbjct: 548  ASLPMSPLATP-PPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP-RLTL 605

Query: 985  GLATGPLSTPETPPRQPEPPSLVAGASGGASPV-----GFT--PRGGL--SPP------- 1028
             LA GP   P   P        +AG S  A+       G+   P GG   SPP       
Sbjct: 606  ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAA 665

Query: 1029 ------GHSPGPPRTFPSAP------PRASGSHGSLLL-------PPASSPPPPQVPQRR 1069
                     P PP  F  AP      P A+G   +  L        P S+ P P      
Sbjct: 666  CHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPG 725

Query: 1070 GTPPLTPGRLTQDLKLISASQPA-------LPQDGAQTLRRASPHSSGESMAAFPLFPRA 1122
             +P  + G+        ++S+         LP    Q       H    ++        A
Sbjct: 726  PSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQA--SVVQHLLSRTLLLAAAEGAA 783

Query: 1123 GGGSGGSGSSGGLGPPGRPYGAI 1145
            GG  GG G + G G  G    A+
Sbjct: 784  GGSGGGPGGAEGGGVTGGARAAL 806



 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 84/322 (26%), Positives = 115/322 (35%), Gaps = 65/322 (20%)

Query: 933  ARSPQAAQP---SPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPP---GELSLGL 986
            AR+P A  P   +P PPG+      P    P  P++     + G +G+ P       +G 
Sbjct: 14   ARTPAARAPGLLTPRPPGS------PRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGG 67

Query: 987  ATGPLSTPETPP--------RQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTF 1038
            AT P S P   P        R P      +G    A P   T  G +S PG + G  R  
Sbjct: 68   ATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPG 127

Query: 1039 P--------------------SAPPRASGSHGSL--LLPPASSPPPPQVPQR---RGTPP 1073
            P                     AP R++ S G+      P    P P + +R    GT  
Sbjct: 128  PLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEV 187

Query: 1074 LTPGRLTQDLKLISASQPALPQDG-AQTLRRASPHSSGESMAAFPLFPRAGGGSGGSGS- 1131
              P       +   +++P  P +G  +++  AS HS+ E   A    P AGGG     S 
Sbjct: 188  GLP-------RPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASR 240

Query: 1132 --SGGLGPPGRPYGAIPGQHVTLPRKTSSGSLPPPLSLFGARATSSGGPPLTAGP----- 1184
              S    P   P  + P    T PR  +  S P P  L   R      P   A P     
Sbjct: 241  SLSSSATPLSSPARSGPSARGT-PRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPL 299

Query: 1185 QREPGARPEP---VRSKLPSNL 1203
               P A P P   ++S+ P  L
Sbjct: 300  SSSPLATPSPSAALQSQAPPTL 321



 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 81/316 (25%), Positives = 109/316 (34%), Gaps = 70/316 (22%)

Query: 925  LLTPLQPGARSPQAAQPSPAPP---------------------GARGGLGLPEHFLPPPP 963
            LLTP  PG+  P    P P  P                     G  GG  +PE      P
Sbjct: 24   LLTPRPPGSPRP----PPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGP 79

Query: 964  ------SSRSPSSSPGQLGQ----PPGELSLGLATGPLSTPETPPRQPEPPSL------- 1006
                  SSR+P+S P   G+    PP +     + GP+S+P        P  L       
Sbjct: 80   TRSAGTSSRNPASRPPASGRGERAPPAK---NTSPGPVSSPGRASGTTRPGPLGQKGLRI 136

Query: 1007 -----VAGASGGASPVGFTPRGGL--SPPGHSPGPPRTFPSAPPRASGSHGSLLLP-PAS 1058
                 VA      +P       G      G +PG P    +   RA+G+   L  P P++
Sbjct: 137  SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 196

Query: 1059 SPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPL 1118
             P PP    R+     +    T+     S +    P  G    R   P S   S +A PL
Sbjct: 197  RPRPPTEGPRKSVSSASEHSTTEP----SPAARRRPSAGGGLQR---PASRSLSSSATPL 249

Query: 1119 FPRAGGGSGGSGSSGGLGPPGRP----YGAIPGQHVTLPRKTSSGSLPP----PLSLFGA 1170
               A  G    G+      P +P      A+    VT PRK ++ +L P    PL+    
Sbjct: 250  SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSP 309

Query: 1171 RAT--SSGGPPLTAGP 1184
             A   S   P L A P
Sbjct: 310  SAALQSQAPPTLPATP 325



 Score = 38.5 bits (88), Expect = 0.039
 Identities = 34/136 (25%), Positives = 51/136 (37%), Gaps = 10/136 (7%)

Query: 26  MDEEEDAEEEGAGGRQDPSRRSIRLRPLPSPSPSAAAGGTESRSSALGAADSEGPARGAG 85
           MD + D  + GA  R   +R    L P P  SP      T +    LGAA + G    A 
Sbjct: 1   MDNKRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAE 60

Query: 86  KSSTNGDCRRFRGSLASLGSRGGGSGGTGSGSSHGHLHDSAEERRLIAEGDASPGEDRTP 145
           ++   G       ++     R G +   G+ S +      A  R     G+ +P    T 
Sbjct: 61  RAGGIGG-----ATIPESAPRAGPTRSAGTSSRNPASRPPASGR-----GERAPPAKNTS 110

Query: 146 PGLAAEPERPGASAQP 161
           PG  + P R   + +P
Sbjct: 111 PGPVSSPGRASGTTRP 126



 Score = 31.2 bits (69), Expect = 6.2
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 143 RTPPGLAAEPER--PGASAQPAASP---PPPQQPPQPAS 176
           + PP LAA P +  P   A P  SP   PPPQ PP  A+
Sbjct: 469 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 507


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,158,748
Number of Sequences: 37866
Number of extensions: 4097779
Number of successful extensions: 74405
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 2794
Number of HSP's that attempted gapping in prelim test: 30482
Number of HSP's gapped (non-prelim): 28364
length of query: 1203
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1089
effective length of database: 13,930,794
effective search space: 15170634666
effective search space used: 15170634666
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.