CHPF2 31098

Name: CHPF2	Sequence: fasta or formatted (772aa)		NCBI GI: 48717495
Description: chondroitin polymerizing factor 2		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 80 4 C cysteine 1.7 13 1 D aspartate 4.1 32 2 E glutamate 7.1 55 4 F phenylalanine 4.4 34 2 G glycine 8.0 62 2 H histidine 2.6 20 2 I isoleucine 1.8 14 1 K lysine 1.7 13 2 L leucine 13.9 107 3 M methionine 1.4 11 1 N asparagine 1.9 15 1 P proline 7.3 56 2 Q glutamine 4.5 35 2 R arginine 9.8 76 2 S serine 6.0 46 2 T threonine 3.6 28 2 V valine 5.6 43 2 W tryptophan 1.2 9 1 Y tyrosine 3.0 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chondroitin polymerizing factor 2 CHPF 0.537 chondroitin polymerizing factor CHSY1 0.096 chondroitin sulfate synthase 1 CHSY3 0.096 chondroitin sulfate synthase 3 C1GALT1 0.026 core 1 synthase, glycoprotein-N-acetylgalactosamine 3... CSGALNACT2 0.019 chondroitin sulfate N-acetylgalactosaminyltransferas... CSGALNACT1 0.016 chondroitin sulfate N-acetylgalactosaminyltransfera... CSGALNACT1 0.016 chondroitin sulfate N-acetylgalactosaminyltransfera... RFNG 0.014 radical fringe CECR2 0.010 cat eye syndrome chromosome region, candidate 2 [Ho... SNIP 0.009 SNAP25-interacting protein GLDN 0.009 gliomedin HOXD11 0.008 homeobox D11 C1QL4 0.008 complement component 1, q subcomponent-like 4 MFNG 0.008 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransfer... CNTROB 0.007 centrobin, centrosomal BRCA2 interacting protein is... CNTROB 0.007 centrobin, centrosomal BRCA2 interacting protein iso... ARTN 0.007 neurotrophic factor artemin isoform 2 ARTN 0.007 neurotrophic factor artemin isoform 1 precursor [Ho... ARTN 0.007 neurotrophic factor artemin isoform 3 precursor [Ho... ARTN 0.007 neurotrophic factor artemin isoform 1 precursor [Ho... ARTN 0.007 neurotrophic factor artemin isoform 3 precursor [Ho... SF3B4 0.007 splicing factor 3b, subunit 4 COL2A1 0.007 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.007 collagen, type II, alpha 1 isoform 2 precursor [Hom... UPF1 0.007 regulator of nonsense transcripts 1 COL4A5 0.007 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.007 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.007 type IV collagen alpha 5 isoform 3 precursor C9orf75 0.007 hypothetical protein LOC286262 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.