Guide to the Human Genome
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Name: CECR2 Sequence: fasta or formatted (1484aa) NCBI GI: 148612882
Description:

cat eye syndrome chromosome region, candidate 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         84           2
 C cysteine            1.7         25           1
 D aspartate           4.0         59           3
 E glutamate           8.0        119           5
 F phenylalanine       2.8         42           1
 G glycine             8.7        129           2
 H histidine           3.3         49           2
 I isoleucine          2.0         29           2
 K lysine              4.5         67           2
 L leucine             7.5        112           2
 M methionine          3.0         45           2
 N asparagine          2.7         40           1
 P proline            12.3        182           4
 Q glutamine           5.9         88           2
 R arginine            6.7         99           2
 S serine              9.2        137           4
 T threonine           4.2         63           1
 V valine              3.8         57           2
 W tryptophan          1.1         17           2
 Y tyrosine            2.8         41           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cat eye syndrome chromosome region, candidate 2 [Ho... 
KAT2A                 0.023   general control of amino acid synthesis 5-like 2 [H...
KAT2B                 0.022   K(lysine) acetyltransferase 2B 
BPTF                  0.021   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.021   bromodomain PHD finger transcription factor isoform ...
BRD4                  0.019   bromodomain-containing protein 4 isoform short 
BRD4                  0.019   bromodomain-containing protein 4 isoform long 
BAZ1B                 0.018   bromodomain adjacent to zinc finger domain, 1B [Homo...
TAF1                  0.017   TBP-associated factor 1 isoform 2 
TAF1                  0.017   TBP-associated factor 1 isoform 1 
BAZ2B                 0.017   bromodomain adjacent to zinc finger domain, 2B [Homo...
TAF1L                 0.017   TBP-associated factor RNA polymerase 1-like 
BAZ2A                 0.016   bromodomain adjacent to zinc finger domain, 2A [Homo...
PCLO                  0.016   piccolo isoform 2 
PCLO                  0.016   piccolo isoform 1 
BRDT                  0.016   testis-specific bromodomain protein 
BRDT                  0.016   testis-specific bromodomain protein 
FLJ22184              0.016   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.016   PREDICTED: hypothetical protein LOC80164 
BRD2                  0.015   bromodomain containing 2 
BRD2                  0.015   bromodomain containing 2 
BRD3                  0.015   bromodomain containing protein 3 
BAZ1A                 0.015   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.015   bromodomain adjacent to zinc finger domain, 1A isofo...
FLJ22184              0.014   PREDICTED: hypothetical protein FLJ22184 
PRB2                  0.014   proline-rich protein BstNI subfamily 2 
TRIM24                0.014   transcriptional intermediary factor 1 alpha isoform ...
TRIM24                0.014   transcriptional intermediary factor 1 alpha isoform ...
COL5A1                0.014   alpha 1 type V collagen preproprotein 
WDR33                 0.013   WD repeat domain 33 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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