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Search of human proteins with 4826724
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4826724 zygin 1 isoform 1 [Homo sapiens]
(392 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4826724 zygin 1 isoform 1 [Homo sapiens] 780 0.0
gi|110349756 zygin 2 isoform 2 [Homo sapiens] 314 8e-86
gi|110349754 zygin 2 isoform 1 [Homo sapiens] 260 1e-69
gi|12025680 zygin 1 isoform 2 [Homo sapiens] 214 1e-55
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 52 7e-07
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 51 2e-06
gi|221219020 NYD-SP11 protein [Homo sapiens] 50 4e-06
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 49 1e-05
gi|82697315 RUN and FYVE domain containing 3 isoform 1 [Homo sap... 49 1e-05
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 46 5e-05
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 46 5e-05
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 46 5e-05
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 46 5e-05
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 46 5e-05
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 46 5e-05
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 46 5e-05
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 46 7e-05
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 46 7e-05
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 46 7e-05
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 46 7e-05
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 46 7e-05
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 46 7e-05
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 45 9e-05
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 45 9e-05
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 45 1e-04
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 44 2e-04
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 44 3e-04
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 44 3e-04
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 43 4e-04
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 43 4e-04
>gi|4826724 zygin 1 isoform 1 [Homo sapiens]
Length = 392
Score = 780 bits (2013), Expect = 0.0
Identities = 392/392 (100%), Positives = 392/392 (100%)
Query: 1 MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSME 60
MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSME
Sbjct: 1 MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSME 60
Query: 61 DLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSED 120
DLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSED
Sbjct: 61 DLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSED 120
Query: 121 WRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPD 180
WRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPD
Sbjct: 121 WRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPD 180
Query: 181 PEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQVE 240
PEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQVE
Sbjct: 181 PEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQVE 240
Query: 241 GAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQ 300
GAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQ
Sbjct: 241 GAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQ 300
Query: 301 SSRIEKGNQMPLKRFSMEGISNILQSGIRQTFGSSGTDKQYLNTVIPYEKKASPPSVEDL 360
SSRIEKGNQMPLKRFSMEGISNILQSGIRQTFGSSGTDKQYLNTVIPYEKKASPPSVEDL
Sbjct: 301 SSRIEKGNQMPLKRFSMEGISNILQSGIRQTFGSSGTDKQYLNTVIPYEKKASPPSVEDL 360
Query: 361 QMLTNILFAMKEDNEKVPTLLTDYILKVLCPT 392
QMLTNILFAMKEDNEKVPTLLTDYILKVLCPT
Sbjct: 361 QMLTNILFAMKEDNEKVPTLLTDYILKVLCPT 392
>gi|110349756 zygin 2 isoform 2 [Homo sapiens]
Length = 380
Score = 314 bits (805), Expect = 8e-86
Identities = 180/339 (53%), Positives = 234/339 (69%), Gaps = 26/339 (7%)
Query: 67 DEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPN- 125
+EKL++CFR + E P + ++ E LQ +E+W+ALTDNY + DW+ +
Sbjct: 55 EEKLSLCFRPSDPGAE---PPRTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSHT 111
Query: 126 --IEALNGNCS----------DTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEE 173
+ L N S DT E+ E+ + S S +N+EPL TADQVIEEIEE
Sbjct: 112 RTLHLLTLNLSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEE 171
Query: 174 MMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELT 233
MMQ SPDPE++E T S S+L QE+Q L ++ ++ E ++ +S SEL
Sbjct: 172 MMQESPDPEDDET--------PTQSDRLSMLSQEIQTLKRSSTGSYE-ERVKRLSVSELN 222
Query: 234 ELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293
E+L+++E AI+++SEELVQQLA RDELEFEKEVKNSFI+VLIEVQNKQKE +E KK++K
Sbjct: 223 EILEEIETAIKEYSEELVQQLALRDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKK 282
Query: 294 EKGLSLQSSRIEKGNQMPLKRFSMEGISNILQSGIRQTFGSSGTDKQYLNTVIPYEKKAS 353
K S Q+ + E+ + MP RFSMEGISN++Q+G+R TFG+SG +KQYL TVIPYEKK
Sbjct: 283 LKNGSSQNGKNERSH-MPGTRFSMEGISNVIQNGLRHTFGNSGGEKQYLTTVIPYEKKNG 341
Query: 354 PPSVEDLQMLTNILFAMKEDNEKVPTLLTDYILKVLCPT 392
PPSVEDLQ+LT IL AMKED+EKVP+LLTDYILKVLCPT
Sbjct: 342 PPSVEDLQILTKILRAMKEDSEKVPSLLTDYILKVLCPT 380
>gi|110349754 zygin 2 isoform 1 [Homo sapiens]
Length = 353
Score = 260 bits (665), Expect = 1e-69
Identities = 163/339 (48%), Positives = 211/339 (62%), Gaps = 53/339 (15%)
Query: 67 DEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPN- 125
+EKL++CFR + E P + ++ E LQ +E+W+ALTDNY + DW+ +
Sbjct: 55 EEKLSLCFRPSDPGAE---PPRTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSHT 111
Query: 126 --IEALNGNCS----------DTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEE 173
+ L N S DT E+ E+ + S S +N+EPL TADQVIEEIEE
Sbjct: 112 RTLHLLTLNLSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEE 171
Query: 174 MMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELT 233
MMQ SPDPE++E T S S+L QE+Q L ++ ++ E ++ +S SEL
Sbjct: 172 MMQESPDPEDDET--------PTQSDRLSMLSQEIQTLKRSSTGSYE-ERVKRLSVSELN 222
Query: 234 ELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293
E+L+++E AI+++SEELVQQLA RDELEFEKEVKNSFI+VLIEVQNKQKE +E KK++K
Sbjct: 223 EILEEIETAIKEYSEELVQQLALRDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKK 282
Query: 294 EKGLSLQSSRIEKGNQMPLKRFSMEGISNILQSGIRQTFGSSGTDKQYLNTVIPYEKKAS 353
K S Q+ + E+ + MP GT YL TVIPYEKK
Sbjct: 283 LKNGSSQNGKNER-SHMP------------------------GT---YLTTVIPYEKKNG 314
Query: 354 PPSVEDLQMLTNILFAMKEDNEKVPTLLTDYILKVLCPT 392
PPSVEDLQ+LT IL AMKED+EKVP+LLTDYILKVLCPT
Sbjct: 315 PPSVEDLQILTKILRAMKEDSEKVPSLLTDYILKVLCPT 353
>gi|12025680 zygin 1 isoform 2 [Homo sapiens]
Length = 104
Score = 214 bits (545), Expect = 1e-55
Identities = 104/104 (100%), Positives = 104/104 (100%)
Query: 1 MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSME 60
MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSME
Sbjct: 1 MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSME 60
Query: 61 DLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEE 104
DLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEE
Sbjct: 61 DLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEE 104
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 52.4 bits (124), Expect = 7e-07
Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 44/282 (15%)
Query: 39 EDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEE 98
E+ + E E + E+ + E +EK+ + + E + Q +I+EEE+
Sbjct: 401 EEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEKKMWRQEEK---IHEQEKIREEEK 457
Query: 99 TLQDEEVWDALTDNYIPSLSEDWR--------------DPNIEALNGNCSDTEIHEKEEE 144
+ EE+W + I E WR + + D E +E+E
Sbjct: 458 RQEQEEMWRQ--EEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEKMHDQEEKIREQE 515
Query: 145 EFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVL 204
E + E EE + ++ I E EEMMQ E+EE++ E+E E + + +
Sbjct: 516 EKMWRQEEKIREQEEKIREQEEKIREQEEMMQ-----EQEEKMGEQE---EKMQEQEKMR 567
Query: 205 LQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEK 264
QE + Q E +R E E + + E IR+ EE++Q+ ++E +E+
Sbjct: 568 RQEEKIREQEEKIREQKEKIR-----EQEEKIWEQEEKIRE-QEEMMQE---QEEKMWEQ 618
Query: 265 EVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEK 306
E K + E + K +EQ E K RR+E+ + Q R+ +
Sbjct: 619 EEK------MCEQEEKMQEQEE--KMRRQEEKMWEQEVRLRQ 652
Score = 35.4 bits (80), Expect = 0.089
Identities = 54/291 (18%), Positives = 117/291 (40%), Gaps = 51/291 (17%)
Query: 60 EDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDA----------- 108
E+ + E++EK+ + E + + +++ QEE+ Q+E +W+
Sbjct: 306 EEKIQEWEEKIQ-------EQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMM 358
Query: 109 -LTDNYIPSLSE-DW-RDPNIEALNGNCSDTE-IHEKE----------EEEFNEKSENDS 154
+ + L E W ++ I L + E I E+E E+E ++ E
Sbjct: 359 WEKEEKMRRLEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKM 418
Query: 155 GINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQ--------------- 199
EE + ++ I E E+ M + E+E + EE+ + +
Sbjct: 419 WRQEEKIREQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIW 478
Query: 200 ADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQV---EGAIRDFSEELVQQLAR 256
+ E + + + W E H ++ E +++ E IR+ E++ +Q +
Sbjct: 479 RQKEKMHEQEKIRKQEEKVWRQEEKMHDQEEKIREQEEKMWRQEEKIREQEEKIREQEEK 538
Query: 257 -RDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEK 306
R++ E +E + ++Q ++K +R+ K R +E+ + Q +I +
Sbjct: 539 IREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQEEKIREQKEKIRE 589
Score = 28.9 bits (63), Expect = 8.4
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 25/185 (13%)
Query: 60 EDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQ-IQEEEETLQDEEVWDALTDNYIPSLS 118
E+ + E +EK+ +R E ++ Q + I+E+EE +Q++E + +
Sbjct: 508 EEKIREQEEKM---WRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMQEQE 564
Query: 119 EDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNS 178
+ R + E +E++E + E EE + +++++E EE M
Sbjct: 565 KMRRQEE------KIREQEEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQEEKMW-- 616
Query: 179 PDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQ 238
E+EE++ E+E+ + Q + + QE W E ++ E +
Sbjct: 617 ---EQEEKMCEQEE--KMQEQEEKMRRQE--------EKMWEQEVRLRQQEEKMQEHQEH 663
Query: 239 VEGAI 243
+E AI
Sbjct: 664 LEAAI 668
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 50.8 bits (120), Expect = 2e-06
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 20/243 (8%)
Query: 60 EDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSE 119
E+ + E +EK+ + E + + + +EE+ Q+E +W+ + I L E
Sbjct: 294 EEKIQEREEKIQEQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWE--KEEKIRELEE 351
Query: 120 DWRDPNIEALNGNCSDTEIHEK-EEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNS 178
+ E + + EK E+E ++ E EE + ++ I E EEMMQ
Sbjct: 352 KMHEQ--EKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQ 409
Query: 179 PDP--EEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSG--SELTE 234
+ E+EE++ E+E+ E Q + + QE + Q E +R E E
Sbjct: 410 EEKMGEQEEKMWEQEE--EMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEE 467
Query: 235 LLDQVEGAIRDFSEELVQQ---LARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKR 291
+ + EG + + ++ +Q + R++E E+E K + E + K +EQ E+M+++
Sbjct: 468 KMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKK------IREQEEKIREQEEMMQEQ 521
Query: 292 RKE 294
++
Sbjct: 522 EEK 524
Score = 44.3 bits (103), Expect = 2e-04
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 82 ENLAPVKNQLQIQEEEETL-------QDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCS 134
+ L V +LQ Q EE L Q+E++W + E R+ I+
Sbjct: 260 KELQSVSAKLQAQVEENELWNRLNQQQEEKMW-----RQEEKIQE--REEKIQEQEEKIR 312
Query: 135 DTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGG 194
+ E + +EE + E EE + ++ I E+EE M E+EE +EE
Sbjct: 313 EQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEE--- 369
Query: 195 ETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSG--SELTELLDQVEGAIRDFSEELVQ 252
E + + QE + Q E +R E E + + E + + EE+ +
Sbjct: 370 EKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQE 429
Query: 253 Q---LARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKG 296
Q + R++E E+E K + E + K +EQ E+M+++ ++ G
Sbjct: 430 QEEKMRRQEEKIREQEKK------IREQEEKIREQEEMMQEQEEKMG 470
Score = 41.6 bits (96), Expect = 0.001
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 41/254 (16%)
Query: 60 EDLVNEFDEKLNVC--FRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSL 117
E+ + E +EK++ R K + ++ Q + QE+E + +E + I
Sbjct: 343 EEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQ 402
Query: 118 SE--DWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMM 175
E ++ + + E +E+EE + E E+ + ++ I E EEMM
Sbjct: 403 EEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMM 462
Query: 176 QNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTEL 235
Q E+EE + E++G +A +QE + E +R E
Sbjct: 463 Q------EQEEKMGEQEGKMCEQEAK---MQEQE------------EKMRRQE-----EK 496
Query: 236 LDQVEGAIRDFSEELVQQ---LARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRR 292
+ + E IR+ E++ +Q + ++E +E+E K + E + K +EQ E K RR
Sbjct: 497 IREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEK------MCEQEEKMQEQEE--KMRR 548
Query: 293 KEKGLSLQSSRIEK 306
+E+ + Q R+ +
Sbjct: 549 QEEKMREQEVRLRQ 562
Score = 37.7 bits (86), Expect = 0.018
Identities = 28/138 (20%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 57 KSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPS 116
+ E+++ E +EK+ + E + + +++ QEE+ Q++++ +
Sbjct: 400 REQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIREQE 459
Query: 117 LSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQ 176
++ + G + E +E+EE + E E+ + ++ I E EEMMQ
Sbjct: 460 EMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQ 519
Query: 177 NSPDP--EEEEEVLEEED 192
+ E+EE++ E+E+
Sbjct: 520 EQEEKMWEQEEKMCEQEE 537
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 50.1 bits (118), Expect = 4e-06
Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 48 NFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWD 107
+FS + E + KL R K E + +++L + E L DEE
Sbjct: 2124 DFSEKRSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGG 2183
Query: 108 ALTDNYIPSLSEDWRDPNIEALNGNCS----DTEIHEKEEEE-FNEKSEN--DSGINEEP 160
+ IP L WR EA G+ +++ E E EE F+E+ E+ D +E
Sbjct: 2184 IEEEEVIPFLKRRWRKRK-EAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQES 2242
Query: 161 LLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWS 220
L + ++ E EE + EEEEE EEE+G E + + +E + +
Sbjct: 2243 LSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEE---EEKKKKKKEKKKEEV 2299
Query: 221 YEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNK 280
E + E E++ + E EE + + +E++ EKE+ E Q K
Sbjct: 2300 QE--KEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKK------EKQFK 2351
Query: 281 QKEQRELMKKRRKEKGLSL 299
+EQR R +E+ LS+
Sbjct: 2352 LQEQRR-KSLRGRERVLSI 2369
Score = 37.7 bits (86), Expect = 0.018
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 31/165 (18%)
Query: 47 ENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVW 106
E FSS++ +S E E + L+ + + +E + + + +EEE ++EE
Sbjct: 2211 EKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERK 2270
Query: 107 DALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQ 166
+ E+ + + EKEEEE +K + +E + ++
Sbjct: 2271 E----------EEEGEEKQV-------------EKEEEEKKKKKKEK---KKEEVQEKEE 2304
Query: 167 VIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQAL 211
V EE EE+M EEE E L +E+ E S + + +E + L
Sbjct: 2305 VFEEKEEIMS-----EEETESLSDEEEEEESCSLEEEVDREKEIL 2344
Score = 34.3 bits (77), Expect = 0.20
Identities = 62/278 (22%), Positives = 116/278 (41%), Gaps = 35/278 (12%)
Query: 60 EDLVNEFDEKLNVCFRNYNAKTENLAPVKN-QLQIQEEEETLQDEEVW-------DALTD 111
E+++ E D+KL + + EN+ K+ + Q ++EEE +EEV +T+
Sbjct: 1507 EEMLQE-DKKLK--WEEWKQVWENMLSSKSKEQQYKDEEEVTLEEEVSREGEEKEQQVTE 1563
Query: 112 NYIPSLSEDWRDPNIEALNGNCSDTEIHEK----EEEEFNEKSENDSGINEEPLLTAD-Q 166
+ E+ + I E+ +EEE + E E L A +
Sbjct: 1564 EQ-RHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQEERQLAQEERKLAQAYVK 1622
Query: 167 VIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRH 226
+ ++ EM Q ++EE L + GE SQ L Q+ + L + + E
Sbjct: 1623 ITQDDREMAQAEGKFAQKEETLAQR--GEKLSQEAEKLAQKRKKLAKKWEKVAREEEKLA 1680
Query: 227 MSGSELTEL----------LDQVEGAIRDFSEELVQQLAR----RDELEFEKEVKNSFIT 272
G +L E+ L Q E + +EL Q+L +EL +++E N
Sbjct: 1681 KKGGKLAEVKNILAQKVEELPQREQNLDWQEKELAQELEELEWDMEELSWKEEELNQEEG 1740
Query: 273 VLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEKGNQM 310
L+E + K E+ E + +R++ LS + +++ + ++
Sbjct: 1741 KLVEEKKKLAEEEEALAWQREK--LSEEETKLAQEEEL 1776
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 48.5 bits (114), Expect = 1e-05
Identities = 58/295 (19%), Positives = 123/295 (41%), Gaps = 31/295 (10%)
Query: 21 EDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAK 80
E +E+ + + H ++ + E + + E+ V +EK+ +
Sbjct: 470 EKRQEQEEMWRQEEKIHEQEEIWRQKEKMHEQEEKIRKQEEKVWRQEEKIREQEEKIREQ 529
Query: 81 TENLAPVKNQLQIQEE-----EETLQDEEVWDALTDNYIPSLSEDWR-DPNIEALNGNCS 134
E + + +++ QEE E+ + E++W+ + + WR + I
Sbjct: 530 EEKMWRQEEKIREQEEMWREEEKMHEQEKIWEE--EKRQEQEDKMWRQEEKIREQEEKVW 587
Query: 135 DTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGG 194
E +E+EE ++ E EE + ++ I+E EE ++ + E+E + +E
Sbjct: 588 RQEEKIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQEQEE 647
Query: 195 ETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQ- 253
+ Q + + QE + + + W E E + + E IR+ E++ +Q
Sbjct: 648 KMGEQEEKMCEQE-EKMQEQEETMWRQE-----------EKIREQEKKIREQEEKIREQE 695
Query: 254 --LARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEK 306
+ ++E +E+E K + E + K +EQ E K RR+E+ + Q R+ +
Sbjct: 696 EMMQEQEEKMWEQEEK------MCEQEEKMQEQEE--KMRRQEEKMWEQEVRLRQ 742
Score = 37.0 bits (84), Expect = 0.031
Identities = 44/235 (18%), Positives = 92/235 (39%), Gaps = 44/235 (18%)
Query: 60 EDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSE 119
E+ + E++EK+ + E + + +++ QEE+ Q+E +W+
Sbjct: 306 EEKIQEWEEKIQ-------EQEEKIREQEEKIREQEEKMRRQEEMMWE------------ 346
Query: 120 DWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSP 179
++ + + E + +EE + E EE + ++ I E+EE M
Sbjct: 347 --KEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQE 404
Query: 180 DPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQV 239
E+EE +EE+ ++E + + W E E + +
Sbjct: 405 KIREQEEKRQEEE-----------KIREQEKRQEQEAKMWRQE-----------EKIREQ 442
Query: 240 EGAIRDFSEELVQQLARRDELE-FEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293
E IR+ +++ +Q + E E +E K + + K EQ E+ +++ K
Sbjct: 443 EEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIHEQEEIWRQKEK 497
Score = 33.1 bits (74), Expect = 0.44
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 28/249 (11%)
Query: 95 EEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDS 154
E E+ L D YI L+++ ++E +D E+ EK N K +
Sbjct: 176 ELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEK-----NAKLQEKL 230
Query: 155 GINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQT 214
+ E ++E++ ++ + ++++ E D Q+ S LQ +
Sbjct: 231 QLVESEKSEIQLNVKELKRKLERAKLLLPQQQLQAEADHLGKELQSVSAKLQAQVEENEL 290
Query: 215 FN--NNWSYEGLRHMSGS--ELTELLDQVEGAIRDFSEELVQQ----------------- 253
+N N E + E E + + E IR+ E++ +Q
Sbjct: 291 WNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEK 350
Query: 254 LARRDELEFEKEVK-NSFITVLIEVQNKQKEQRELM-KKRRKEKGLSLQSSRIEKGNQMP 311
+ R++E+ +EKE K ++ E + K + Q E+M +K K + L + EK +
Sbjct: 351 MRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQE 410
Query: 312 LKRFSMEGI 320
KR E I
Sbjct: 411 EKRQEEEKI 419
Score = 32.7 bits (73), Expect = 0.58
Identities = 52/267 (19%), Positives = 115/267 (43%), Gaps = 33/267 (12%)
Query: 57 KSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEE--------VWDA 108
+ E+++ E +EK+ R K ++ Q + ++EEE ++++E +W
Sbjct: 380 RRQEEMMWEKEEKI----RELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQ 435
Query: 109 LTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVI 168
+ I E R+ + + +IHE+E+ EK + +E + ++ I
Sbjct: 436 --EEKIREQEEKIREQEKKMWR---QEEKIHEQEKIREEEKRQE-----QEEMWRQEEKI 485
Query: 169 EEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGL---R 225
E EE+ + E+EE + +++ E + + + ++ + + + W E +
Sbjct: 486 HEQEEIWRQKEKMHEQEEKIRKQE--EKVWRQEEKIREQEEKIREQEEKMWRQEEKIREQ 543
Query: 226 HMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLI-EVQNKQKEQ 284
E ++ +Q + + +E ++ R++E E+E K I E + K++EQ
Sbjct: 544 EEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQEEKIREQEEKVWRQEEKIREQEEKRQEQ 603
Query: 285 RELM-----KKRRKEKGLSLQSSRIEK 306
E M K R +E+ + Q +I +
Sbjct: 604 EEKMWKQEEKIREQEEKIQEQEEKIRE 630
>gi|82697315 RUN and FYVE domain containing 3 isoform 1 [Homo
sapiens]
Length = 620
Score = 48.5 bits (114), Expect = 1e-05
Identities = 68/314 (21%), Positives = 129/314 (41%), Gaps = 44/314 (14%)
Query: 37 HLEDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAK-----------TENLA 85
+L+D + S+ +I + ++ V E + LN N AK TE LA
Sbjct: 241 YLKDGNSSKGTEGDGQITAILDQKNYVEELNRHLNATVNNLQAKVDALEKSNTKLTEELA 300
Query: 86 PVKNQL-QIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEE 144
N++ +QEE E +++E +YI + + A S+ H KEE
Sbjct: 301 VANNRIITLQEEMERVKEES-------SYILESNRKGPKQDRTAEGQALSEARKHLKEET 353
Query: 145 EFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVL 204
+ E + E ++ Q +E +M+ E++V E++D + Q
Sbjct: 354 QLRLDVEKEL----EMQISMRQEMELAMKML--------EKDVCEKQDALVSLRQQ---- 397
Query: 205 LQEMQALTQ--TFNNNWSYEGLRHMS--GSELTELLDQVEGAIRDFSEELVQ-----QLA 255
L +++AL F S G++ S S L E +Q+ I+ + L Q Q A
Sbjct: 398 LDDLRALKHELAFKLQSSDLGVKQKSELNSRLEEKTNQMAATIKQLEQRLRQAERSRQSA 457
Query: 256 RRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEKGNQMPLKRF 315
D F+++ + ++ +EV+ +++ +L + ++EK LQ+ R G
Sbjct: 458 ELDNRLFKQDFGDKINSLQLEVEELTRQRNQLELELKQEKERRLQNDRSIPGRGSQKSES 517
Query: 316 SMEGISNILQSGIR 329
M+G + + ++
Sbjct: 518 KMDGKHKMQEENVK 531
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 46.2 bits (108), Expect = 5e-05
Identities = 77/402 (19%), Positives = 169/402 (42%), Gaps = 49/402 (12%)
Query: 10 EEFEDLRPS-CSE-DPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSMEDLVNEFD 67
EE+E+++ S CS + K + F ++ + + S++ S D +
Sbjct: 577 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEAS--DEAEDMK 634
Query: 68 EKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSED--WRDPN 125
E +N N + L+ + + Q + E+ + + + +T YI + + N
Sbjct: 635 EAMNRMIDELNKQVSELSQLYKEAQAELED--YRKRKSLEDVTAEYIHKAEHEKLMQLTN 692
Query: 126 IEALNGNCSDTEIHEKEEEEFNE----------KSENDSGINE--EPLLTADQVIEEIEE 173
+ + +E+ + + NE + EN I E + + T +E+EE
Sbjct: 693 VSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEE 752
Query: 174 MMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELT 233
+ N + +EV ++ + LL+E A+T SYE L+ SE++
Sbjct: 753 KISNLKEHLASKEV--------EVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVS 804
Query: 234 ELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293
L +++ ++++ + + + R E+ K K + T+L ++K++E EL++K ++
Sbjct: 805 VLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLL---KSKEQEVNELLQKFQQ 861
Query: 294 E-------KGLSLQSSRIEKGNQMPLKRFSME--GISNILQSGIRQTFGSSGTDKQYLNT 344
K + SS++E+ + S E + L S + ++ +S + +Q
Sbjct: 862 AQEELAEMKRYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQ---- 917
Query: 345 VIPYEKKASPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYIL 386
+ +A V+ LQ N L K+ +++V ++ ++L
Sbjct: 918 --SQQLEALQQQVKQLQ---NQLAECKKQHQEVISVYRMHLL 954
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 46.2 bits (108), Expect = 5e-05
Identities = 77/402 (19%), Positives = 169/402 (42%), Gaps = 49/402 (12%)
Query: 10 EEFEDLRPS-CSE-DPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSMEDLVNEFD 67
EE+E+++ S CS + K + F ++ + + S++ S D +
Sbjct: 566 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEAS--DEAEDMK 623
Query: 68 EKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSED--WRDPN 125
E +N N + L+ + + Q + E+ + + + +T YI + + N
Sbjct: 624 EAMNRMIDELNKQVSELSQLYKEAQAELED--YRKRKSLEDVTAEYIHKAEHEKLMQLTN 681
Query: 126 IEALNGNCSDTEIHEKEEEEFNE----------KSENDSGINE--EPLLTADQVIEEIEE 173
+ + +E+ + + NE + EN I E + + T +E+EE
Sbjct: 682 VSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEE 741
Query: 174 MMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELT 233
+ N + +EV ++ + LL+E A+T SYE L+ SE++
Sbjct: 742 KISNLKEHLASKEV--------EVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVS 793
Query: 234 ELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293
L +++ ++++ + + + R E+ K K + T+L ++K++E EL++K ++
Sbjct: 794 VLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLL---KSKEQEVNELLQKFQQ 850
Query: 294 E-------KGLSLQSSRIEKGNQMPLKRFSME--GISNILQSGIRQTFGSSGTDKQYLNT 344
K + SS++E+ + S E + L S + ++ +S + +Q
Sbjct: 851 AQEELAEMKRYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQ---- 906
Query: 345 VIPYEKKASPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYIL 386
+ +A V+ LQ N L K+ +++V ++ ++L
Sbjct: 907 --SQQLEALQQQVKQLQ---NQLAECKKQHQEVISVYRMHLL 943
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 46.2 bits (108), Expect = 5e-05
Identities = 77/402 (19%), Positives = 169/402 (42%), Gaps = 49/402 (12%)
Query: 10 EEFEDLRPS-CSE-DPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSMEDLVNEFD 67
EE+E+++ S CS + K + F ++ + + S++ S D +
Sbjct: 545 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEAS--DEAEDMK 602
Query: 68 EKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSED--WRDPN 125
E +N N + L+ + + Q + E+ + + + +T YI + + N
Sbjct: 603 EAMNRMIDELNKQVSELSQLYKEAQAELED--YRKRKSLEDVTAEYIHKAEHEKLMQLTN 660
Query: 126 IEALNGNCSDTEIHEKEEEEFNE----------KSENDSGINE--EPLLTADQVIEEIEE 173
+ + +E+ + + NE + EN I E + + T +E+EE
Sbjct: 661 VSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEE 720
Query: 174 MMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELT 233
+ N + +EV ++ + LL+E A+T SYE L+ SE++
Sbjct: 721 KISNLKEHLASKEV--------EVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVS 772
Query: 234 ELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293
L +++ ++++ + + + R E+ K K + T+L ++K++E EL++K ++
Sbjct: 773 VLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLL---KSKEQEVNELLQKFQQ 829
Query: 294 E-------KGLSLQSSRIEKGNQMPLKRFSME--GISNILQSGIRQTFGSSGTDKQYLNT 344
K + SS++E+ + S E + L S + ++ +S + +Q
Sbjct: 830 AQEELAEMKRYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQ---- 885
Query: 345 VIPYEKKASPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYIL 386
+ +A V+ LQ N L K+ +++V ++ ++L
Sbjct: 886 --SQQLEALQQQVKQLQ---NQLAECKKQHQEVISVYRMHLL 922
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 46.2 bits (108), Expect = 5e-05
Identities = 77/402 (19%), Positives = 169/402 (42%), Gaps = 49/402 (12%)
Query: 10 EEFEDLRPS-CSE-DPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSMEDLVNEFD 67
EE+E+++ S CS + K + F ++ + + S++ S D +
Sbjct: 574 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEAS--DEAEDMK 631
Query: 68 EKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSED--WRDPN 125
E +N N + L+ + + Q + E+ + + + +T YI + + N
Sbjct: 632 EAMNRMIDELNKQVSELSQLYKEAQAELED--YRKRKSLEDVTAEYIHKAEHEKLMQLTN 689
Query: 126 IEALNGNCSDTEIHEKEEEEFNE----------KSENDSGINE--EPLLTADQVIEEIEE 173
+ + +E+ + + NE + EN I E + + T +E+EE
Sbjct: 690 VSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEE 749
Query: 174 MMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELT 233
+ N + +EV ++ + LL+E A+T SYE L+ SE++
Sbjct: 750 KISNLKEHLASKEV--------EVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVS 801
Query: 234 ELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293
L +++ ++++ + + + R E+ K K + T+L ++K++E EL++K ++
Sbjct: 802 VLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLL---KSKEQEVNELLQKFQQ 858
Query: 294 E-------KGLSLQSSRIEKGNQMPLKRFSME--GISNILQSGIRQTFGSSGTDKQYLNT 344
K + SS++E+ + S E + L S + ++ +S + +Q
Sbjct: 859 AQEELAEMKRYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQ---- 914
Query: 345 VIPYEKKASPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYIL 386
+ +A V+ LQ N L K+ +++V ++ ++L
Sbjct: 915 --SQQLEALQQQVKQLQ---NQLAECKKQHQEVISVYRMHLL 951
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 46.2 bits (108), Expect = 5e-05
Identities = 77/402 (19%), Positives = 169/402 (42%), Gaps = 49/402 (12%)
Query: 10 EEFEDLRPS-CSE-DPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSMEDLVNEFD 67
EE+E+++ S CS + K + F ++ + + S++ S D +
Sbjct: 574 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEAS--DEAEDMK 631
Query: 68 EKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSED--WRDPN 125
E +N N + L+ + + Q + E+ + + + +T YI + + N
Sbjct: 632 EAMNRMIDELNKQVSELSQLYKEAQAELED--YRKRKSLEDVTAEYIHKAEHEKLMQLTN 689
Query: 126 IEALNGNCSDTEIHEKEEEEFNE----------KSENDSGINE--EPLLTADQVIEEIEE 173
+ + +E+ + + NE + EN I E + + T +E+EE
Sbjct: 690 VSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEE 749
Query: 174 MMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELT 233
+ N + +EV ++ + LL+E A+T SYE L+ SE++
Sbjct: 750 KISNLKEHLASKEV--------EVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVS 801
Query: 234 ELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293
L +++ ++++ + + + R E+ K K + T+L ++K++E EL++K ++
Sbjct: 802 VLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLL---KSKEQEVNELLQKFQQ 858
Query: 294 E-------KGLSLQSSRIEKGNQMPLKRFSME--GISNILQSGIRQTFGSSGTDKQYLNT 344
K + SS++E+ + S E + L S + ++ +S + +Q
Sbjct: 859 AQEELAEMKRYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQ---- 914
Query: 345 VIPYEKKASPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYIL 386
+ +A V+ LQ N L K+ +++V ++ ++L
Sbjct: 915 --SQQLEALQQQVKQLQ---NQLAECKKQHQEVISVYRMHLL 951
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 46.2 bits (108), Expect = 5e-05
Identities = 77/402 (19%), Positives = 169/402 (42%), Gaps = 49/402 (12%)
Query: 10 EEFEDLRPS-CSE-DPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSMEDLVNEFD 67
EE+E+++ S CS + K + F ++ + + S++ S D +
Sbjct: 574 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEAS--DEAEDMK 631
Query: 68 EKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSED--WRDPN 125
E +N N + L+ + + Q + E+ + + + +T YI + + N
Sbjct: 632 EAMNRMIDELNKQVSELSQLYKEAQAELED--YRKRKSLEDVTAEYIHKAEHEKLMQLTN 689
Query: 126 IEALNGNCSDTEIHEKEEEEFNE----------KSENDSGINE--EPLLTADQVIEEIEE 173
+ + +E+ + + NE + EN I E + + T +E+EE
Sbjct: 690 VSRAKAEDALSEMKSQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEE 749
Query: 174 MMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELT 233
+ N + +EV ++ + LL+E A+T SYE L+ SE++
Sbjct: 750 KISNLKEHLASKEV--------EVAKLEKQLLEEKAAMTDAMVPRSSYEKLQSSLESEVS 801
Query: 234 ELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293
L +++ ++++ + + + R E+ K K + T+L ++K++E EL++K ++
Sbjct: 802 VLASKLKESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLL---KSKEQEVNELLQKFQQ 858
Query: 294 E-------KGLSLQSSRIEKGNQMPLKRFSME--GISNILQSGIRQTFGSSGTDKQYLNT 344
K + SS++E+ + S E + L S + ++ +S + +Q
Sbjct: 859 AQEELAEMKRYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQ---- 914
Query: 345 VIPYEKKASPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYIL 386
+ +A V+ LQ N L K+ +++V ++ ++L
Sbjct: 915 --SQQLEALQQQVKQLQ---NQLAECKKQHQEVISVYRMHLL 951
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 46.2 bits (108), Expect = 5e-05
Identities = 74/316 (23%), Positives = 139/316 (43%), Gaps = 45/316 (14%)
Query: 46 LENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEV 105
+E +E+ S K +D + + EKL V + Y + E L + QE+E L+D+E+
Sbjct: 609 VEKHKTELESLKHQQDAL--WTEKLQVLKQQYQTEMEKL----REKCEQEKETLLKDKEI 662
Query: 106 WDALTDNYIPSLSE------DWRDPNIEALNGNCSDT-EIHEKEEEEFNE--------KS 150
+ +I ++E D + +E+L+ S+ + K EEE + K
Sbjct: 663 ---IFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHKLEEELSVLKDQTDKMKQ 719
Query: 151 ENDSGINEEP---LLTADQVIEEIEEMMQNSPDPEEE-----EEVLEEEDGGETSSQADS 202
E ++ ++E+ D +I+E E +Q + ++ E +L+E D QA
Sbjct: 720 ELEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQINQLELLLKERDKHLKEHQAHV 779
Query: 203 VLLQ--------EMQALTQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQL 254
L+ E+Q + + SY+ H E L Q++ + D E +
Sbjct: 780 ENLEADIKRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQLAQLQQKLLDLETERILLT 839
Query: 255 ARRDELEFE-KEVKNSFITVLIEVQN-KQKEQRELMKKRRKEKGLS-LQSSRIEKGN--Q 309
+ E+E + K+V I+VQ+ Q+ +++ + +K K L+ + S++E GN Q
Sbjct: 840 KQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQNSEMEQKVKSLTQVYESKLEDGNKEQ 899
Query: 310 MPLKRFSMEGISNILQ 325
K+ +E + ILQ
Sbjct: 900 EQTKQILVEKENMILQ 915
Score = 40.0 bits (92), Expect = 0.004
Identities = 77/409 (18%), Positives = 162/409 (39%), Gaps = 76/409 (18%)
Query: 45 ELENFSSEIIS-FKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDE 103
+++ S E IS + ++D N+F E + + ++ QL+++ +E +DE
Sbjct: 1420 KVDTLSKEKISALEQVDDWSNKFSEWKKKAQSRFTQHQNTVKELQIQLELKSKEAYEKDE 1479
Query: 104 EVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEE---EFNEKSENDSGINEEP 160
++ + L + D ++ + L G D + +++E E KS+ + E
Sbjct: 1480 QI-NLLKEEL------DQQNKRFDCLKGEMEDDKSKMEKKESNLETELKSQTARIMELED 1532
Query: 161 LLTADQV-IEEIEEMMQN---SPDPEEEEEV--------LEEEDGGETSSQADSVLLQEM 208
+T + IE + E+++N D E +E V L EE + +L E
Sbjct: 1533 HITQKTIEIESLNEVLKNYNQQKDIEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLEN 1592
Query: 209 QALTQTFNNNWSYEGLRHM---------------------SGSELTELLDQVEGAIRDFS 247
Q + + L H+ S ++L EL + E I
Sbjct: 1593 QVYSMKAELETKKKELEHVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIK 1652
Query: 248 EELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKE--------------QRELMKKRRK 293
++L+ Q+ ++E +++K ++ + ++Q +++E Q E + R
Sbjct: 1653 KQLLSQMEEKEE-QYKKGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETLIVPRS 1711
Query: 294 EKGLSLQSSRIEKGNQMPLKRFSMEGISNILQSGI---RQTFGSSGTDK----------- 339
K ++ + + E +Q +++ E IS +LQ + + G +K
Sbjct: 1712 AKNVAAYTEQEEADSQGCVQKTYEEKIS-VLQRNLTEKEKLLQRVGQEKEETVSSHFEMR 1770
Query: 340 -QYLNTVIPYEKKASPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYILK 387
QY +I E A ED M+ ++ ++E N+K ++ ++ K
Sbjct: 1771 CQYQERLIKLE-HAEAKQHEDQSMIGHLQEELEEKNKKYSLIVAQHVEK 1818
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 45.8 bits (107), Expect = 7e-05
Identities = 57/281 (20%), Positives = 121/281 (43%), Gaps = 20/281 (7%)
Query: 40 DPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEET 99
+ L + + E + M D + + ++ +++ ++K + A V L+I +E E
Sbjct: 714 ESQLKKAHEAALEARASPEMSDRIQHLEREITR-YKDESSKAQ--AEVDRLLEILKEVEN 770
Query: 100 LQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINE- 158
++++ D I L +D N + N + +K + E + +N+
Sbjct: 771 EKNDK------DKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDS 824
Query: 159 -----EPLLTADQVIEEIEEMMQNSPD-PEEEEEVLEEEDGGETSSQAD-SVLLQEMQAL 211
+ L D IEE+EE ++ S E E VL +E+ T+++ LL M+ +
Sbjct: 825 SQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKV 884
Query: 212 TQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFI 271
Q + + S +E L + R EE+++ +++ L K++ I
Sbjct: 885 KQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEM--KQEALLAAISEKDANI 942
Query: 272 TVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEKGNQMPL 312
L+E+ + +K+ +E + ++EK +Q + + N+M L
Sbjct: 943 A-LLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKL 982
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 45.8 bits (107), Expect = 7e-05
Identities = 57/281 (20%), Positives = 121/281 (43%), Gaps = 20/281 (7%)
Query: 40 DPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEET 99
+ L + + E + M D + + ++ +++ ++K + A V L+I +E E
Sbjct: 686 ESQLKKAHEAALEARASPEMSDRIQHLEREITR-YKDESSKAQ--AEVDRLLEILKEVEN 742
Query: 100 LQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINE- 158
++++ D I L +D N + N + +K + E + +N+
Sbjct: 743 EKNDK------DKKIAELERQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDS 796
Query: 159 -----EPLLTADQVIEEIEEMMQNSPD-PEEEEEVLEEEDGGETSSQAD-SVLLQEMQAL 211
+ L D IEE+EE ++ S E E VL +E+ T+++ LL M+ +
Sbjct: 797 SQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLMAMEKV 856
Query: 212 TQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFI 271
Q + + S +E L + R EE+++ +++ L K++ I
Sbjct: 857 KQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEM--KQEALLAAISEKDANI 914
Query: 272 TVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEKGNQMPL 312
L+E+ + +K+ +E + ++EK +Q + + N+M L
Sbjct: 915 A-LLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKL 954
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 45.8 bits (107), Expect = 7e-05
Identities = 56/275 (20%), Positives = 120/275 (43%), Gaps = 35/275 (12%)
Query: 39 EDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEE 98
E+ + E + + + E+ + +EK++ + + + + +++ QEE+
Sbjct: 303 EEKIQEQEEKMCEQELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKI 362
Query: 99 TLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEEEF----NEKSENDS 154
Q+E++W + I E ++ E E EK +E+ + E D
Sbjct: 363 REQEEKMWRQ--EEKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDE 420
Query: 155 GINE--EPLLTADQVIEEIEEMMQNSPDP-EEEEEVLEEEDGGETSSQADSVLLQEMQAL 211
I E E + ++ I E+EEMMQ+ + E EE ++EE+ E + + + ++ + +
Sbjct: 421 KIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEE--EKMQEQEEKIQRQEEKI 478
Query: 212 TQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFI 271
+ W E +LL Q E + + +E +++ R++E +E+E K
Sbjct: 479 QEQEEKTWRQE-----------KLLKQEE---KIWEQE--EKMWRQEEKMWEQEEKMQ-- 520
Query: 272 TVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEK 306
+ ++K QR+ K R +E L Q ++++
Sbjct: 521 ------EQEEKMQRQEEKMREQEVRLWQQEEKMQE 549
Score = 34.3 bits (77), Expect = 0.20
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 67 DEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNI 126
+EK+ + E L V+ ++Q +EEE+ + EE + + WR +
Sbjct: 433 EEKIRELEEMMQDQEEKLREVEEKMQ-EEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKL 491
Query: 127 EALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEE 186
+ +I E+EE+ + + EE + ++ ++E EE MQ + E+E
Sbjct: 492 LK-----QEEKIWEQEEKMWRQ---------EEKMWEQEEKMQEQEEKMQRQEEKMREQE 537
Query: 187 VLEEEDGGETSSQADSVLLQEMQ 209
V + E Q V LQE++
Sbjct: 538 VRLWQQ--EEKMQEQEVRLQELE 558
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 45.8 bits (107), Expect = 7e-05
Identities = 56/275 (20%), Positives = 120/275 (43%), Gaps = 35/275 (12%)
Query: 39 EDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEE 98
E+ + E + + + E+ + +EK++ + + + + +++ QEE+
Sbjct: 303 EEKIQEQEEKMCEQELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKI 362
Query: 99 TLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEEEF----NEKSENDS 154
Q+E++W + I E ++ E E EK +E+ + E D
Sbjct: 363 REQEEKMWRQ--EEKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQDE 420
Query: 155 GINE--EPLLTADQVIEEIEEMMQNSPDP-EEEEEVLEEEDGGETSSQADSVLLQEMQAL 211
I E E + ++ I E+EEMMQ+ + E EE ++EE+ E + + + ++ + +
Sbjct: 421 KIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEE--EKMQEQEEKIQRQEEKI 478
Query: 212 TQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFI 271
+ W E +LL Q E + + +E +++ R++E +E+E K
Sbjct: 479 QEQEEKTWRQE-----------KLLKQEE---KIWEQE--EKMWRQEEKMWEQEEKMQ-- 520
Query: 272 TVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEK 306
+ ++K QR+ K R +E L Q ++++
Sbjct: 521 ------EQEEKMQRQEEKMREQEVRLWQQEEKMQE 549
Score = 34.3 bits (77), Expect = 0.20
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 67 DEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNI 126
+EK+ + E L V+ ++Q +EEE+ + EE + + WR +
Sbjct: 433 EEKIRELEEMMQDQEEKLREVEEKMQ-EEEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKL 491
Query: 127 EALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEE 186
+ +I E+EE+ + + EE + ++ ++E EE MQ + E+E
Sbjct: 492 LK-----QEEKIWEQEEKMWRQ---------EEKMWEQEEKMQEQEEKMQRQEEKMREQE 537
Query: 187 VLEEEDGGETSSQADSVLLQEMQ 209
V + E Q V LQE++
Sbjct: 538 VRLWQQ--EEKMQEQEVRLQELE 558
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 45.8 bits (107), Expect = 7e-05
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 28/242 (11%)
Query: 119 EDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNS 178
ED + EAL + + KEE K E EEP ++V + + +
Sbjct: 463 EDEKSEMEEALTAITEELAVSMKEE-----KKEAAEEKEEEPEAEEEEVAAKKSPVKATA 517
Query: 179 PDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQ 238
P+ +EEE EEE+G E + D + ++ + EG GS E +Q
Sbjct: 518 PEVKEEEGEKEEEEGQEEEEEED-----------EGAKSDQAEEGGSEKEGSSEKEEGEQ 566
Query: 239 VEGAIRDFS--EELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKG 296
EG + EE + ++ E + E+ + +V+ +K + + K +EKG
Sbjct: 567 EEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKG 626
Query: 297 LS-LQSSRIEKGNQMPLKRFSME--GISNILQSGIRQTFGSSGTDKQYLNTVIPYEKKAS 353
S + S +E+ + P+ + +E G S + +S + + G S K P E+KA
Sbjct: 627 KSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEK-GKSPVSKS------PVEEKAK 679
Query: 354 PP 355
P
Sbjct: 680 SP 681
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 45.8 bits (107), Expect = 7e-05
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 28/242 (11%)
Query: 119 EDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNS 178
ED + EAL + + KEE K E EEP ++V + + +
Sbjct: 87 EDEKSEMEEALTAITEELAVSMKEE-----KKEAAEEKEEEPEAEEEEVAAKKSPVKATA 141
Query: 179 PDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQ 238
P+ +EEE EEE+G E + D + ++ + EG GS E +Q
Sbjct: 142 PEVKEEEGEKEEEEGQEEEEEED-----------EGAKSDQAEEGGSEKEGSSEKEEGEQ 190
Query: 239 VEGAIRDFS--EELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKG 296
EG + EE + ++ E + E+ + +V+ +K + + K +EKG
Sbjct: 191 EEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKG 250
Query: 297 LS-LQSSRIEKGNQMPLKRFSME--GISNILQSGIRQTFGSSGTDKQYLNTVIPYEKKAS 353
S + S +E+ + P+ + +E G S + +S + + G S K P E+KA
Sbjct: 251 KSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEK-GKSPVSKS------PVEEKAK 303
Query: 354 PP 355
P
Sbjct: 304 SP 305
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 45.4 bits (106), Expect = 9e-05
Identities = 47/248 (18%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 60 EDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSE 119
E + E +E++ + E + + Q++ QEE+ Q+E+V + + E
Sbjct: 198 EGQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQV--QKQEEQVQKQEE 255
Query: 120 DWRDPNIEALNGNCSDTEIHEKEEEEFNEK----SENDSGINEEPLLTADQVIEEIEEMM 175
R + + ++ E+EE+ +K E +G EE + ++ + E EE M
Sbjct: 256 QMRKQEEQMRE---QEEQMREQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQM 312
Query: 176 QNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTEL 235
+ E+EE++ E+E E + + + ++ + + + W E E E
Sbjct: 313 R-----EQEEQMREQE---EQMGKQEEQMWEQKEQMWEQKEQMWKQE----EQMGEQEEQ 360
Query: 236 LDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEK 295
+ + E +R E++ +Q +++ ++E + E + + EQ+E M+++ ++
Sbjct: 361 MQKQEEQVRKQEEQMRKQ---EEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQM 417
Query: 296 GLSLQSSR 303
G + R
Sbjct: 418 GEQKEQMR 425
Score = 35.8 bits (81), Expect = 0.068
Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 7/229 (3%)
Query: 92 QIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPN--IEALNGNCSDTEIHEKEEEEFNEK 149
Q++E+E ++++E + + R+ + G + E E+E +
Sbjct: 144 QVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQMGEQEGQMGE 203
Query: 150 SENDSGINEEPLLTADQVIEEIEEMMQNSPDPE-EEEEVLEEEDGGETSSQADSVLLQEM 208
E G EE + ++ + E EE M+ + E+EE +++++ + Q + + QE
Sbjct: 204 QEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQE-EQVQKQEEQMRKQEE 262
Query: 209 QALTQTFNNNWSYEG-LRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVK 267
Q Q E L+ +E E + E +R+ E++ +Q + E E + +
Sbjct: 263 QMREQEEQMREQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQ 322
Query: 268 NSFITVLIEVQNKQKEQRELMKKR--RKEKGLSLQSSRIEKGNQMPLKR 314
+ E +QKEQ K++ ++E+ + Q +++K + K+
Sbjct: 323 EEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQEEQMQKQEEQVRKQ 371
Score = 30.0 bits (66), Expect = 3.8
Identities = 31/179 (17%), Positives = 71/179 (39%), Gaps = 6/179 (3%)
Query: 13 EDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSMEDLVNEFDEKLNV 72
E +R + E++ Q E+ + + E + + E+ + E +E++
Sbjct: 262 EQMREQEEQMREQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMRE 321
Query: 73 CFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGN 132
+ E + K Q+ Q+E+ Q+E++ + + + E R +
Sbjct: 322 QEEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGE--QEEQMQKQEEQVRKQEEQMR--- 376
Query: 133 CSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEE 191
E K+EE+ ++ E E+ +Q+ E+ E+M + ++EE + E+
Sbjct: 377 -KQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQMGEQKEQMRKQEEHMGEQ 434
Score = 29.6 bits (65), Expect = 4.9
Identities = 33/177 (18%), Positives = 68/177 (38%), Gaps = 6/177 (3%)
Query: 10 EEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSMEDLVNEFDEK 69
E+ E +R + ++K Q E+ + E + + E+ + E +E+
Sbjct: 266 EQEEQMREQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMREQEEQMREQEEQMREQEEQ 325
Query: 70 LNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEAL 129
+ + E + K Q+ QEE+ Q+E++ + + E R +
Sbjct: 326 MGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQEEQM--QKQEEQVRKQEEQMRKQEEQMR 383
Query: 130 NGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEE 186
E K+EE+ E+ E E+ +Q+ E+ E+M + E++E
Sbjct: 384 ----KQEEQMRKQEEQMGEQKEQMGEQKEQMREQEEQMGEQKEQMRKQEEHMGEQKE 436
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 45.4 bits (106), Expect = 9e-05
Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 55/285 (19%)
Query: 39 EDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEE 98
E+ + E E + E+ + E +EK+ + E + Q +I+EEE+
Sbjct: 462 EEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEKMWRQEEK---IHEQEKIREEEK 518
Query: 99 TLQDEEVWDALTDNYIPSLSEDWR---------------DPNIEALNGNCSDTEIHEKEE 143
+ EE+W + I E WR + + D E +E+
Sbjct: 519 RQEQEEMWRQ--EEKIREQEEIWRQKEKIHEQEEKIRKQEEKMWRQEEKMHDQEEKIREQ 576
Query: 144 EEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDP--EEEEEVLEEEDGGETSSQAD 201
EE + E EE + ++ I E EEM Q + E+EE++ E+E+ + Q +
Sbjct: 577 EEKVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEE--KMQEQEE 634
Query: 202 SVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELE 261
+ QE E +R E + + + E IR+ EE++Q+ ++E
Sbjct: 635 KMRRQE--------------EKIR-----EQEKKIREQEEKIRE-QEEMMQE---QEEKM 671
Query: 262 FEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEK 306
+E+E K + E + K +EQ E K RR+E+ + Q R+ +
Sbjct: 672 WEQEEK------MCEQEEKMQEQEE--KMRRQEEKMWEQEVRLRQ 708
Score = 39.7 bits (91), Expect = 0.005
Identities = 62/304 (20%), Positives = 121/304 (39%), Gaps = 60/304 (19%)
Query: 60 EDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWD-----ALTDNYI 114
E+ + E++EK+ + E + + +++ QEE+ Q+E +W+ + +
Sbjct: 367 EEKIQEWEEKIQ-------EQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMM 419
Query: 115 PSLSEDWR---------DPNIEALNGNCSDTE-IHEKE----------EEEFNEKSENDS 154
E R + I L + E I E+E E+E ++ E
Sbjct: 420 WEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKM 479
Query: 155 GINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSS----QADSVLLQE--- 207
EE + ++ I E EE M + E+E + EE+ + Q + + QE
Sbjct: 480 WRQEEKIREQEEKIREQEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIW 539
Query: 208 ---------MQALTQTFNNNWSYEGLRHMSGSELTELLDQV---EGAIRDFSEELVQQ-- 253
+ + + W E H ++ E ++V E IR+ E++ +Q
Sbjct: 540 RQKEKIHEQEEKIRKQEEKMWRQEEKMHDQEEKIREQEEKVWRQEEKIREQEEKIREQEE 599
Query: 254 -LARRDELEFEKEVK-NSFITVLIEVQNKQKEQRELMKK-----RRKEKGLSLQSSRIEK 306
+ ++E+ E+E K + E + K +EQ E M++ R +EK + Q +I +
Sbjct: 600 KIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIRE 659
Query: 307 GNQM 310
+M
Sbjct: 660 QEEM 663
Score = 36.2 bits (82), Expect = 0.052
Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 31/214 (14%)
Query: 89 NQLQIQEEEETLQDEEV---WDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEE-- 143
N+L Q+EE+ + EE W+ + E + + + EKEE
Sbjct: 353 NRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKM 412
Query: 144 ---EEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQA 200
EE + E EE + ++ I E+EE M E+EE +EE+
Sbjct: 413 RRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEE-------- 464
Query: 201 DSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDEL 260
++E + + W E E + + E IR+ E++ +Q + E
Sbjct: 465 ---KIREQEKRQEQEAKMWRQE-----------EKIREQEEKIREQEEKMWRQEEKIHEQ 510
Query: 261 E-FEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293
E +E K + + K +EQ E+ +++ K
Sbjct: 511 EKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEK 544
Score = 36.2 bits (82), Expect = 0.052
Identities = 31/152 (20%), Positives = 68/152 (44%), Gaps = 20/152 (13%)
Query: 92 QIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSE 151
+I+E+EE ++++E ++++ + E C E +++EE+ + E
Sbjct: 593 KIREQEEKIREQE-----------EMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEE 641
Query: 152 NDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQAL 211
E+ + ++ I E EEMMQ E+EE++ E+E E + + + ++ + +
Sbjct: 642 KIRE-QEKKIREQEEKIREQEEMMQ-----EQEEKMWEQE---EKMCEQEEKMQEQEEKM 692
Query: 212 TQTFNNNWSYEGLRHMSGSELTELLDQVEGAI 243
+ W E ++ E + +E AI
Sbjct: 693 RRQEEKMWEQEVRLRQQEEKMQEHQEHLEAAI 724
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 45.1 bits (105), Expect = 1e-04
Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 25/232 (10%)
Query: 140 EKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQ 199
E E +++ E + I L + E +E + Q EEE+++L+++ ET SQ
Sbjct: 764 ELRATELSKQLEMEKEIVSSTRLDLQKKSEALESIKQKLTKQEEEKQILKQDF--ETLSQ 821
Query: 200 ADSVLLQEMQALTQTFNNNWSYEGLRHMS--------GSELTELLDQVEGAIRDFSEELV 251
+ +E+ QT + + +L+++ D ++ + +F +E
Sbjct: 822 ETKIQHEELNNRIQTTVTELQKVKMEKEALMTELSTVKDKLSKVSDSLKNSKSEFEKE-- 879
Query: 252 QQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEKGNQMP 311
Q + L+ EK K + ++++N KEQ+EL K KEK E +Q+
Sbjct: 880 NQKGKAAILDLEKTCKELKHQLQVQMENTLKEQKELKKSLEKEK---------EASHQLK 930
Query: 312 LKRFSMEGISNILQSGIRQTFGSSGTDKQYLNTVIPYEKKASPPSVEDLQML 363
L+ SM+ ++Q+ + T + ++Q L I K++S + ++ L
Sbjct: 931 LELNSMQ--EQLIQA--QNTLKQNEKEEQQLQGNINELKQSSEQKKKQIEAL 978
Score = 37.4 bits (85), Expect = 0.024
Identities = 56/272 (20%), Positives = 122/272 (44%), Gaps = 22/272 (8%)
Query: 44 SELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEE--ETLQ 101
+ELEN + ++ ++ ++L E EK++V NY E +++ +E E T Q
Sbjct: 990 TELENKLQQQLT-QAAQELAAE-KEKISVLQNNYEKSQETFKQLQSDFYGRESELLATRQ 1047
Query: 102 D----EEVWDALTDNYIPSLSEDWRDPNI--EALNGNCSDTEIHEKEEEEFNEKSENDSG 155
D EE ++ I + ++ + E + + K+E++ E+ +
Sbjct: 1048 DLKSVEEKLSLAQEDLISNRNQIGNQNKLIQELKTAKATLEQDSAKKEQQLQERCKALQD 1107
Query: 156 INEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTF 215
I +E L +++ E ++ + EE + +E++ + + + S L+ ++ +T
Sbjct: 1108 IQKEKSLKEKELVNEKSKLAEI-----EEIKCRQEKEITKLNEELKSHKLESIKEIT--- 1159
Query: 216 NNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLI 275
N + L EL D ++ A+ E+ QQ+ + + E+E+K FI
Sbjct: 1160 -NLKDAKQLLIQQKLELQGKADSLKAAVEQ--EKRNQQILKDQVKKEEEELKKEFIEKEA 1216
Query: 276 EVQNKQKEQRELMKKRRK-EKGLSLQSSRIEK 306
++ ++ KE+ MKK + E L++Q + + +
Sbjct: 1217 KLHSEIKEKEVGMKKHEENEAKLTMQITALNE 1248
Score = 35.0 bits (79), Expect = 0.12
Identities = 67/309 (21%), Positives = 114/309 (36%), Gaps = 54/309 (17%)
Query: 43 LSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQL----QIQEEEE 98
L E SSE + K E V + KL+ K N +++QL Q +E++
Sbjct: 437 LKEQRQLSSEKLMDK--EQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQHQEQQ 494
Query: 99 TLQDE------EVWDALTDNYIPSLSEDWRDPNIEALNGNCSDT-EIHEKEEEEFNEKSE 151
LQ E + L +D + N+EAL + + EKE E+ K +
Sbjct: 495 ALQQSTTAKLREAQNDLEQVLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQ 554
Query: 152 NDSG-------INEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEE---EDGGETSSQAD 201
G + E+ +QV + E++ S ++ +E L + E + D
Sbjct: 555 AGEGETAVLNQLQEKNHTLQEQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQD 614
Query: 202 SVLLQE--MQALTQTFNNN------------------WSYEGLRHMSGSELTELLDQVEG 241
VL E + L N + S E + ++L LD +
Sbjct: 615 RVLSLETSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQN 674
Query: 242 AIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQS 301
A++D +EL + + D+ +T ++ + + Q E K KEK LSL+
Sbjct: 675 ALQDKQQELNKITTQLDQ-----------VTAKLQDKQEHCSQLESHLKEYKEKYLSLEQ 723
Query: 302 SRIEKGNQM 310
E Q+
Sbjct: 724 KTEELEGQI 732
Score = 31.6 bits (70), Expect = 1.3
Identities = 40/198 (20%), Positives = 77/198 (38%), Gaps = 13/198 (6%)
Query: 125 NIEALNGNCSDTEIHEKEE----EEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPD 180
++ L D + KEE EE ++ E G+ ++ V + E+
Sbjct: 84 DVTLLRQEVQDLQASLKEEKWYSEELKKELEKYQGLQQQEAKPDGLVTDSSAELQSLEQQ 143
Query: 181 PEEEE-EVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQV 239
EE + E + + Q + L E+ + ++ S + LTE L++
Sbjct: 144 LEEAQTENFNIKQMKDLFEQKAAQLATEIADIKSKYDEERSLREAAEQKVTRLTEELNKE 203
Query: 240 EGAIRDFSEELVQQLARRDELEFEKE---VKNSFITVLIEVQNKQKEQRELMKKRR---- 292
I+D EL+Q+ D +KE V+ + +E + + ++ ++ KK +
Sbjct: 204 ATVIQDLKTELLQRPGIEDVAVLKKELVQVQTLMDNMTLERERESEKLKDECKKLQSQYA 263
Query: 293 -KEKGLSLQSSRIEKGNQ 309
E +S S + KG Q
Sbjct: 264 SSEATISQLRSELAKGPQ 281
Score = 28.9 bits (63), Expect = 8.4
Identities = 49/239 (20%), Positives = 97/239 (40%), Gaps = 23/239 (9%)
Query: 80 KTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIH 139
K+E L +K +L QEEE+ + ++ +LS++ + + E LN N T +
Sbjct: 791 KSEALESIKQKLTKQEEEKQILKQD---------FETLSQETKIQH-EELN-NRIQTTVT 839
Query: 140 EKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQ 199
E ++ K E ++ + E L T + ++ + ++NS E+ E + G
Sbjct: 840 ELQK----VKMEKEALMTE--LSTVKDKLSKVSDSLKNSKSEFEK----ENQKGKAAILD 889
Query: 200 ADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDE 259
+ + L N + S + E Q++ + E+L+Q +
Sbjct: 890 LEKTCKELKHQLQVQMENTLKEQKELKKSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQ 949
Query: 260 LEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEKGNQMPLKRFSME 318
E E++ I L + ++K+Q E ++ K LQ + +E Q L + + E
Sbjct: 950 NEKEEQQLQGNINELKQSSEQKKKQIEALQGELKI--AVLQKTELENKLQQQLTQAAQE 1006
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 44.3 bits (103), Expect = 2e-04
Identities = 48/255 (18%), Positives = 109/255 (42%), Gaps = 31/255 (12%)
Query: 57 KSMEDLVNEFDEKLNVC---FRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNY 113
+ E+ + E DE+L R E + ++ + ++QE+E+ +D+E
Sbjct: 393 RDQEERMWEQDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQE--------- 443
Query: 114 IPSLSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEE 173
+ E+ R I + E +E+EE +K E + EE ++ E+ E+
Sbjct: 444 -EKMQEEER---IREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEK 499
Query: 174 MMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGS--E 231
+ + E+EE++ E+E+ +++ + + W E +R E
Sbjct: 500 LWEQEKMQEQEEKIWEQEE-----------KIRDQEEMWGQEKKMWRQEKMREQEDQMWE 548
Query: 232 LTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKR 291
E + E + D E + ++ +++ +++E K + E + K +E+ E+M R
Sbjct: 549 QEEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMM--R 606
Query: 292 RKEKGLSLQSSRIEK 306
+E+ + Q ++++
Sbjct: 607 EQEEKMQEQEEKMQE 621
Score = 44.3 bits (103), Expect = 2e-04
Identities = 44/228 (19%), Positives = 94/228 (41%), Gaps = 19/228 (8%)
Query: 80 KTENLAPVKNQLQIQEEEETLQDEEVWDA---LTDNYIPSLSEDWRDPNIEALNGNCSDT 136
+ E + ++Q+ QEE+ Q++++WD + + W +
Sbjct: 535 RQEKMREQEDQMWEQEEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMRER 594
Query: 137 EIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDP--EEEEEVLEEEDG- 193
E +EEEE + E EE + ++ + E EE MQ + E+EE++ E+E+
Sbjct: 595 EKKMREEEEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKM 654
Query: 194 -------GETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDF 246
+ + +QE + + + W E + + + + DQ + +
Sbjct: 655 WEQQRLPEQKEKLWEHEKMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEES 714
Query: 247 SEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKE 294
E +++ +E+ E+E K + E + K +EQ E M ++ ++
Sbjct: 715 MREREKKMREEEEMMREQEEK------MQEQEEKMQEQEEEMWEQEEK 756
Score = 43.1 bits (100), Expect = 4e-04
Identities = 34/185 (18%), Positives = 81/185 (43%), Gaps = 5/185 (2%)
Query: 39 EDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEE 98
++ + E E + E+++ E +EK+ + E + + ++Q QEE+
Sbjct: 581 QEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEEKM 640
Query: 99 TLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINE 158
Q+E++W+ + + ++ E + + E +++EE+ E+ + + E
Sbjct: 641 WEQEEKMWEQEEKMWEQQRLPEQKEKLWE--HEKMQEQEKMQEQEEKIWEQEKMEKKTQE 698
Query: 159 EPLLTADQ-VIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNN 217
+ T DQ + E E M + EEEE++ E++ E + + + ++ + + +
Sbjct: 699 QEKKTWDQEKMREEESMREREKKMREEEEMMREQE--EKMQEQEEKMQEQEEEMWEQEEK 756
Query: 218 NWSYE 222
W E
Sbjct: 757 MWEQE 761
Score = 32.7 bits (73), Expect = 0.58
Identities = 23/109 (21%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 87 VKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGN----CSDTEIHEKE 142
++ Q ++QE+EE + ++E + T + + E++ + E+ ++
Sbjct: 673 MQEQEKMQEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMREREKKMREEEEMMREQ 732
Query: 143 EEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEE 191
EE+ E+ E EE +++ E+ E+M + PE++E++ E E
Sbjct: 733 EEKMQEQEEKMQEQEEEMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEHE 781
Score = 32.3 bits (72), Expect = 0.76
Identities = 42/225 (18%), Positives = 94/225 (41%), Gaps = 28/225 (12%)
Query: 78 NAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTE 137
N E + + +L+ QE++ Q+E++W ++ + G + E
Sbjct: 268 NTLQEEMWRQEEELREQEKKIRKQEEKMWR--------------QEERLREQEGKMREQE 313
Query: 138 IHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEED----- 192
+E+ + E + E+ L ++ E+ E+M + E+EE + E++
Sbjct: 314 EKMWRQEKRLREQEKELREQEKELREQKELREQEEQMQEQEEKMWEQEEKMREQEEKMWR 373
Query: 193 GGETSSQADSVLLQEMQALTQTFNNNWSY-EGLRHMSG--SELTELLDQVEGAIRDFSEE 249
E + + + ++ Q + W E LR E ++ +QVE +R+ +
Sbjct: 374 QEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQVE-KMREEKKM 432
Query: 250 LVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRKE 294
Q+ RD+ E +E + + E + K +E+ E M+++ ++
Sbjct: 433 QEQEKKTRDQEEKMQEEER-----IREREKKMREEEETMREQEEK 472
Score = 29.6 bits (65), Expect = 4.9
Identities = 32/174 (18%), Positives = 70/174 (40%), Gaps = 14/174 (8%)
Query: 39 EDPSLSELENFSSEIISFKSMEDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEE 98
+ + E E+ + E+++ E +EK+ + E + + ++ QEE+
Sbjct: 705 DQEKMREEESMREREKKMREEEEMMREQEEKMQ-------EQEEKMQEQEEEMWEQEEKM 757
Query: 99 TLQDEEVWDALTDNYIPSLSED-WRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGIN 157
Q+E++W+ +P E W ++ E +EE+ + E G
Sbjct: 758 WEQEEKMWE---QQRLPEQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKMRGQEEKMRG-Q 813
Query: 158 EEPLLTADQVIEEIEEMMQNSPDP--EEEEEVLEEEDGGETSSQADSVLLQEMQ 209
EE + ++ + EE M + +EE++ +E+ E Q ++E +
Sbjct: 814 EEKMRGQEEKMWGQEEKMWGQEEKMWGQEEKMWGQEEKMEEKMQGQEEKMREQE 867
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 43.5 bits (101), Expect = 3e-04
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 115 PSLSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEM 174
P+L ED NI N + + E E+EEEE E+ E + EE + EE EE
Sbjct: 872 PALEEDLTVINI---NSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEE 928
Query: 175 MQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQAL 211
+ + EEEE LEEE+ E + + L+E++ L
Sbjct: 929 EEFEEEFEEEEGELEEEEEEEDEEEEEE--LEEVEDL 963
Score = 35.4 bits (80), Expect = 0.089
Identities = 38/128 (29%), Positives = 52/128 (40%), Gaps = 30/128 (23%)
Query: 79 AKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEI 138
A E+L + +EEEE ++EE + E+ + + E E
Sbjct: 873 ALEEDLTVININSSDEEEEEEEEEEEEEE----------EEEEEEEDFE---------EE 913
Query: 139 HEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEED------ 192
E EEE F E+ E + EE ++ EE EE D EEEEE+ E ED
Sbjct: 914 EEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEE-----EDEEEEEELEEVEDLEFGTA 968
Query: 193 GGETSSQA 200
GGE A
Sbjct: 969 GGEVEEGA 976
Score = 28.9 bits (63), Expect = 8.4
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 13/101 (12%)
Query: 162 LTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSY 221
LT + EE + + EEEEE EEE+ E + + +E + + F
Sbjct: 878 LTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFE----- 932
Query: 222 EGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEF 262
E E ++E + EE ++L ++LEF
Sbjct: 933 --------EEFEEEEGELEEEEEEEDEEEEEELEEVEDLEF 965
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 43.5 bits (101), Expect = 3e-04
Identities = 75/347 (21%), Positives = 147/347 (42%), Gaps = 48/347 (13%)
Query: 1 MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSME 60
+E L DEE E+ R K QC S L+ + S +E + K ME
Sbjct: 1584 LERKLSEKDEEIENFR--------RKQQCTIDSLQSSLDSEAKSRIEVTRLK----KKME 1631
Query: 61 DLVNEFDEKLNVCFRNYNAKTENLAPVKNQ---LQIQEEEETLQDEEVWDALT-----DN 112
+ +NE + +L+ R + T++L ++ Q LQ+Q ++ T + ++ + + ++
Sbjct: 1632 EDLNEMELQLSCANRQVSEATKSLGQLQIQIKDLQMQLDDSTQLNSDLKEQVAVAERRNS 1691
Query: 113 YIPSLSEDWRDPNIEALNG-NCSDTEIHEKEEEEFNEKSENDSGINEEPLLTAD--QVIE 169
+ S ED R + G S+ E+ E E ++N S ++++ L AD ++ +
Sbjct: 1692 LLQSELEDLRSLQEQTERGRRLSEEELLEATERINLFYTQNTSLLSQKKKLEADVARMQK 1751
Query: 170 EIEEMMQNSPDPEEE------------EEVLEEEDG----GETSSQADSVL--LQEMQAL 211
E EE++Q + EE+ EE+ +++D T + + LQ+ A
Sbjct: 1752 EAEEVVQECQNAEEKAKKAAIEAANLSEELKKKQDTIAHLERTRENMEQTITDLQKRLAE 1811
Query: 212 TQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFI 271
+ S + ++ + S + EL ++EG IR +E A+R E+ +K
Sbjct: 1812 AEQMALMGSRKQIQKLE-SRVRELEGELEGEIRRSAE------AQRGARRLERCIKELTY 1864
Query: 272 TVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEKGNQMPLKRFSME 318
+ +N + Q ++ K + K + Q E L ++ +
Sbjct: 1865 QAEEDKKNLSRMQTQMDKLQLKVQNYKQQVEVAETQANQYLSKYKKQ 1911
Score = 32.3 bits (72), Expect = 0.76
Identities = 74/380 (19%), Positives = 140/380 (36%), Gaps = 48/380 (12%)
Query: 1 MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSME 60
+E L +E +DL + +EK + H E+E + +I
Sbjct: 955 LEDECFELKKEIDDLETMLVKSEKEK------RTTEHKVKNLTEEVEFLNEDISKLNRAA 1008
Query: 61 DLVNEFDEKLNVCFRNYNAKTENL--APVKNQLQIQEEEETLQDEEVWDALTDNYIPSLS 118
+V E ++ K +L A +K + Q+ E E L+ E + + L
Sbjct: 1009 KVVQEAHQQTLDDLHMEEEKLSSLSKANLKLEQQVDELEGALEQERKARMNCERELHKLE 1068
Query: 119 EDWR-----DPNIEALNGNCSDTEIHEKEEE--EFNEKSENDSGINEEPLLTADQVIEEI 171
+ + N+E+ + ++ E+ +KE E + N K EN+ G+ + T ++ +I
Sbjct: 1069 GNLKLNRESMENLESSQRHLAE-ELRKKELELSQMNSKVENEKGLVAQLQKTVKELQTQI 1127
Query: 172 EEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSE 231
+++ + +E E T AD E L + GS
Sbjct: 1128 KDLKEKLEAERTTRAKMERERADLTQDLAD------------------LNERLEEVGGSS 1169
Query: 232 LTELLDQVEGAIRDFSEELVQQLARRDE---LEFE---KEVKNSFITVLIEVQNKQKEQR 285
L +L I E Q+L R E L FE +K L E++ + + +
Sbjct: 1170 LAQL------EITKKQETKFQKLHRDMEEATLHFETTSASLKKRHADSLAELEGQVENLQ 1223
Query: 286 ELMKKRRKEKG-LSLQ-SSRIEKGNQMPLKRFSMEGISNILQSGIRQTFGSSGTDKQYLN 343
++ +K K+K L L+ + + QM + + E + + + + + Q N
Sbjct: 1224 QVKQKLEKDKSDLQLEVDDLLTRVEQMTRAKANAEKLCTLYEERLHEATAKLDKVTQLAN 1283
Query: 344 TVIPYEKKASPPSVEDLQML 363
+ + K S E L+ L
Sbjct: 1284 DLAAQKTKLWSESGEFLRRL 1303
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 43.1 bits (100), Expect = 4e-04
Identities = 74/354 (20%), Positives = 137/354 (38%), Gaps = 40/354 (11%)
Query: 37 HLEDPSLSELENFS---SEIISFKSMEDLVNE--------FDEKLNVCFRNYNAKTENLA 85
H++D E E+ +E++ K + V E +++ +N + ++L
Sbjct: 371 HIKDEFFHEREDLEFKINELLLAKEEQGCVIEKLKSELAGLNKQFCYTVEQHNREVQSLK 430
Query: 86 PVKNQLQIQEEEETLQDEEVWDALTDNY-IPSLSEDWRDPNIEALNGNCSDTEIHEKEEE 144
++Q +I E ET + + LT + I L E + E + + E E
Sbjct: 431 E-QHQKEISELNETFLSDSEKEKLTLMFEIQGLKEQCENLQQEKQEAILNYESLREIMEI 489
Query: 145 EFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVL 204
E E+ I++E Q ++ E+ Q E++ L E +
Sbjct: 490 LQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNRLQGENEKLLS 549
Query: 205 LQEM-QALTQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFE 263
QE+ L T N G+ +S S+ +L ++EG I +EE
Sbjct: 550 QQELVPELENTIKNLQEKNGVYLLSLSQRDTMLKELEGKINSLTEE-------------- 595
Query: 264 KEVKNSFITVLIEVQNKQKEQRELMKKRRKEKGLSLQSSRIEKGNQMPLKRFSMEGISNI 323
K+ FI +++N +E KK +E+ L L+ + K Q +E N
Sbjct: 596 ---KDDFIN---KLKNSHEEMDNFHKKCEREERLILELGK--KVEQTIQYNSELEQKVNE 647
Query: 324 LQSGIRQTFGSSGTDKQYLNTVIPYEKKASPPSVEDLQMLTNILFAMKEDNEKV 377
L G+ +T + Q L ++ K S ED ++L+ + ++ E+N K+
Sbjct: 648 LTGGLEETLKEKDQNDQKLEKLMVQMKVLS----EDKEVLSAEVKSLYEENNKL 697
Score = 41.2 bits (95), Expect = 0.002
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 68 EKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIE 127
E+L R+Y + E + K +IQ E+E LQ + + + N L +E
Sbjct: 827 EELKSLLRDY--EQEKVLLRKELEEIQSEKEALQSD-LLEMKNANEKTRLENQNLLIQVE 883
Query: 128 ALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLL---TADQVIEEIEEMMQNSP----D 180
++ CS +EIH ++E+ F ++ EN + E+ L A+ ++ +++ + SP D
Sbjct: 884 EVSQTCSKSEIHNEKEKCFIKEHENLKPLLEQKELRDRRAELIL--LKDSLAKSPSVKND 941
Query: 181 P----EEEEEVLE--EEDGGETSSQADSVLLQEMQAL---------TQTFNNNWSYEGLR 225
P +E EE +E E++ E + + + L ++A TQT E LR
Sbjct: 942 PLSSVKELEEKIENLEKECKEKEEKINKIKLVAVKAKKELDSSRKETQTVKE--ELESLR 999
Query: 226 HMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSF 270
+ D ++GA + L++ + ++L+ EKE N+F
Sbjct: 1000 SEKDQLSASMRDLIQGA-ESYKNLLLEYEKQSEQLDVEKERANNF 1043
Score = 37.4 bits (85), Expect = 0.024
Identities = 60/300 (20%), Positives = 118/300 (39%), Gaps = 27/300 (9%)
Query: 1 MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKS-M 59
+E + SL EE +D EE F+ E+ + EL + I + S +
Sbjct: 585 LEGKINSLTEEKDDFINKLKNSHEEMDN-FHKKCER--EERLILELGKKVEQTIQYNSEL 641
Query: 60 EDLVNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSE 119
E VNE L + + + L + Q+++ E++ + EV +N S +
Sbjct: 642 EQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEK 701
Query: 120 DWRDPNIEALNGNCSDTEIHE-------------KEEEEFNEKSENDSGINEEPLLTADQ 166
++E D + E +E++ N+ EN+ + L Q
Sbjct: 702 KQLSRDLEVFLSQKEDVILKEHITQLEKKLQLMVEEQDNLNKLLENEQ---VQKLFVKTQ 758
Query: 167 VIEEIEEM-MQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLR 225
+ ++EM + S D EE++ V + GE+ ++ + ++ Q E
Sbjct: 759 LYGFLKEMGSEVSEDSEEKDVVNVLQAVGESLAKINE---EKCNLAFQRDEKVLELEKEI 815
Query: 226 HMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQR 285
E ++++ +RD+ +E V +E++ EKE S L+E++N ++ R
Sbjct: 816 KCLQEESVVQCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQS---DLLEMKNANEKTR 872
Score = 35.8 bits (81), Expect = 0.068
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 43/295 (14%)
Query: 2 EAPLVSLDEEFEDLRPSCSEDPEEKPQCFYG-SSPHHLEDPSLSELENFSSEIIS-FKSM 59
E ++L E + L+ C +EK + S + + +EL + +I F+SM
Sbjct: 449 EKEKLTLMFEIQGLKEQCENLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFESM 508
Query: 60 EDL----VNEFDEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIP 115
+ V+E +KL F +A E + N+LQ E E+ L +E+ L +N I
Sbjct: 509 KQQQASDVHELQQKLRTAFTEKDALLETV----NRLQ-GENEKLLSQQELVPEL-ENTIK 562
Query: 116 SLSEDWRDPNIEALNGNCSDTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMM 175
+L E + L+ + DT + E E + + E D IN+ ++ E M
Sbjct: 563 NLQEK---NGVYLLSLSQRDTMLKELEGKINSLTEEKDDFINK---------LKNSHEEM 610
Query: 176 QNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELTEL 235
N E EE L +L+ + + QT N E +ELT
Sbjct: 611 DNFHKKCEREERL---------------ILELGKKVEQTIQYNSELE----QKVNELTGG 651
Query: 236 LDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKK 290
L++ ++L + + + L +KEV ++ + L E NK +++ + +
Sbjct: 652 LEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSR 706
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 43.1 bits (100), Expect = 4e-04
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 80 KTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIH 139
K E PV+ + + E+ L D W+A+ D E + GN E+
Sbjct: 483 KEETPPPVEPEEEEDTEDAGLDD---WEAMAS-----------DEETEKVEGNKVHIEVK 528
Query: 140 E--KEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETS 197
E +EEEE E+ E D EE EE E + S EE+E+V +E+D G+T
Sbjct: 529 ENPEEEEEEEEEEEEDEESEEE---------EEEEGESEGSEGDEEDEKVSDEKDSGKTL 579
Query: 198 SQADS 202
+ S
Sbjct: 580 DKKPS 584
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.128 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,646,731
Number of Sequences: 37866
Number of extensions: 781937
Number of successful extensions: 8065
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 526
Number of HSP's that attempted gapping in prelim test: 5169
Number of HSP's gapped (non-prelim): 2076
length of query: 392
length of database: 18,247,518
effective HSP length: 104
effective length of query: 288
effective length of database: 14,309,454
effective search space: 4121122752
effective search space used: 4121122752
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.