Guide to the Human Genome
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Name: FEZ1 Sequence: fasta or formatted (104aa) NCBI GI: 12025680
Description:

zygin 1 isoform 2

Referenced in:

Neurons

Other entries for this name:
alt prot [392aa] zygin 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.9          3           1
 C cysteine            2.9          3           1
 D aspartate           6.7          7           1
 E glutamate          20.2         21           4
 F phenylalanine       5.8          6           1
 G glycine             1.0          1           1
 H histidine           1.9          2           2
 I isoleucine          2.9          3           2
 K lysine              4.8          5           1
 L leucine            10.6         11           1
 M methionine          1.9          2           1
 N asparagine          6.7          7           1
 P proline             6.7          7           1
 Q glutamine           4.8          5           1
 R arginine            1.9          2           1
 S serine             10.6         11           2
 T threonine           1.9          2           1
 V valine              3.8          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zygin 1 isoform 2 
FEZ1                  1.000   zygin 1 isoform 1 
TNNT2                 0.037   troponin T type 2, cardiac isoform 4 
TNNT2                 0.037   troponin T type 2, cardiac isoform 3 
TNNT2                 0.037   troponin T type 2, cardiac isoform 2 
TNNT2                 0.037   troponin T type 2, cardiac isoform 1 
MYH15                 0.037   myosin, heavy polypeptide 15 
KIF20B                0.037   M-phase phosphoprotein 1 
ACACB                 0.026   acetyl-Coenzyme A carboxylase beta 
IRAK3                 0.026   interleukin-1 receptor-associated kinase 3 isoform ...
IRAK3                 0.026   interleukin-1 receptor-associated kinase 3 isoform ...
MIER1                 0.026   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.026   mesoderm induction early response 1 isoform h [Homo...
MIER1                 0.026   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.026   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.026   mesoderm induction early response 1 isoform e [Homo...
MIER1                 0.026   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.026   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.026   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.026   mesoderm induction early response 1 isoform a [Homo...
MPHOSPH6              0.026   M-phase phosphoprotein 6 
SCN1A                 0.021   sodium channel, voltage-gated, type I, alpha 
PON2                  0.021   paraoxonase 2 isoform 2 
PON2                  0.021   paraoxonase 2 isoform 1 
SIPA1L1               0.021   signal-induced proliferation-associated 1 like 1 [Hom...
ITPKA                 0.021   1D-myo-inositol-trisphosphate 3-kinase A 
APC                   0.016   adenomatous polyposis coli 
APC                   0.016   adenomatous polyposis coli 
APC                   0.016   adenomatous polyposis coli 
PTPRQ                 0.016   protein tyrosine phosphatase, receptor type, Q [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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