Guide to the Human Genome
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Name: FEZ1 Sequence: fasta or formatted (392aa) NCBI GI: 4826724
Description:

zygin 1 isoform 1

Referenced in:

Neurons

Other entries for this name:
alt prot [104aa] zygin 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         12           1
 C cysteine            1.3          5           1
 D aspartate           6.1         24           1
 E glutamate          17.1         67           5
 F phenylalanine       3.6         14           1
 G glycine             3.6         14           2
 H histidine           1.0          4           2
 I isoleucine          4.8         19           2
 K lysine              5.9         23           2
 L leucine            10.5         41           2
 M methionine          2.8         11           2
 N asparagine          6.4         25           3
 P proline             4.6         18           2
 Q glutamine           5.9         23           2
 R arginine            3.3         13           2
 S serine              8.9         35           2
 T threonine           4.3         17           1
 V valine              4.3         17           1
 W tryptophan          0.8          3           1
 Y tyrosine            1.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zygin 1 isoform 1 
FEZ2                  0.383   zygin 2 isoform 2 
FEZ2                  0.311   zygin 2 isoform 1 
FEZ1                  0.250   zygin 1 isoform 2 
LOC283767             0.036   golgi autoantigen, golgin subfamily a-like 
LOC645202             0.034   PREDICTED: hypothetical protein LOC645202 
WDR87                 0.033   NYD-SP11 protein 
LOC727832             0.032   golgi autoantigen, golgin subfamily a-like 
RUFY3                 0.032   RUN and FYVE domain containing 3 isoform 1 
RAI14                 0.028   retinoic acid induced 14 isoform d 
RAI14                 0.028   retinoic acid induced 14 isoform c 
RAI14                 0.028   retinoic acid induced 14 isoform b 
RAI14                 0.028   retinoic acid induced 14 isoform a 
RAI14                 0.028   retinoic acid induced 14 isoform a 
RAI14                 0.028   retinoic acid induced 14 isoform a 
GOLGA4                0.028   golgi autoantigen, golgin subfamily a, 4 
ERC1                  0.028   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.028   RAB6-interacting protein 2 isoform delta 
LOC400352             0.028   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.028   PREDICTED: similar to Putative golgin subfamily A m...
NEFM                  0.028   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.028   neurofilament, medium polypeptide 150kDa isoform 2 ...
LOC100133758          0.026   PREDICTED: hypothetical protein, partial 
LOC440243             0.026   PREDICTED: Putative golgin subfamily A member 6-lik...
EEA1                  0.026   early endosome antigen 1, 162kD 
LOC283685             0.025   PREDICTED: golgi autoantigen, golgin subfamily a-li...
PELP1                 0.025   proline, glutamic acid and leucine rich protein 1 [...
MYH15                 0.025   myosin, heavy polypeptide 15 
GCC2                  0.024   GRIP and coiled-coil domain-containing 2 
EIF5B                 0.024   eukaryotic translation initiation factor 5B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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