Guide to the Human Genome
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Name: G3BP2 Sequence: fasta or formatted (449aa) NCBI GI: 45359846
Description:

Ras-GTPase activating protein SH3 domain-binding protein 2 isoform b

Referenced in:

Ras

Other entries for this name:
alt prot [482aa] Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a
alt prot [482aa] Ras-GTPase activating protein SH3 domain-binding protein 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         14           2
 C cysteine            0.2          1           1
 D aspartate           5.1         23           2
 E glutamate          12.9         58           3
 F phenylalanine       4.0         18           2
 G glycine             9.8         44           3
 H histidine           2.7         12           2
 I isoleucine          2.7         12           2
 K lysine              4.5         20           2
 L leucine             5.6         25           2
 M methionine          2.7         12           2
 N asparagine          4.5         20           1
 P proline             9.8         44           3
 Q glutamine           4.5         20           1
 R arginine            9.4         42           2
 S serine              5.6         25           2
 T threonine           3.1         14           2
 V valine              7.6         34           3
 W tryptophan          0.0          0           0
 Y tyrosine            2.4         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-GTPase activating protein SH3 domain-binding pro... 
G3BP2                 0.981   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.981   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP1                 0.543   Ras-GTPase-activating protein SH3-domain-binding prot...
G3BP1                 0.543   Ras-GTPase-activating protein SH3-domain-binding pro...
HNRNPA2B1             0.048   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.048   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
PELP1                 0.046   proline, glutamic acid and leucine rich protein 1 [...
PNN                   0.044   pinin, desmosome associated protein 
HNRNPA3               0.044   heterogeneous nuclear ribonucleoprotein A3 
HNRNPA1L2             0.043   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1L2             0.043   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1               0.041   heterogeneous nuclear ribonucleoprotein A1 isoform b...
HNRNPA1               0.041   heterogeneous nuclear ribonucleoprotein A1 isoform a ...
HNRNPA0               0.038   heterogeneous nuclear ribonucleoprotein A0 
RP1L1                 0.037   retinitis pigmentosa 1-like 1 
HNRNPD                0.037   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRNPD                0.037   heterogeneous nuclear ribonucleoprotein D isoform d ...
HNRNPAB               0.037   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPAB               0.037   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPD                0.034   heterogeneous nuclear ribonucleoprotein D isoform a ...
HNRNPD                0.034   heterogeneous nuclear ribonucleoprotein D isoform c ...
AEBP1                 0.033   adipocyte enhancer binding protein 1 precursor [Homo...
DAZAP1                0.033   DAZ associated protein 1 isoform a 
DAZAP1                0.033   DAZ associated protein 1 isoform b 
HNRPDL                0.032   heterogeneous nuclear ribonucleoprotein D-like [Homo...
RGAG4                 0.031   retrotransposon gag domain containing 4 
LOC120364             0.030   PREDICTED: similar to heterogeneous nuclear ribonuc...
LOC120364             0.030   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.030   PREDICTED: similar to heterogeneous nuclear ribonucl...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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