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Search of human proteins with 4758816
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4758816 N-myristoyltransferase 2 [Homo sapiens]
(498 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4758816 N-myristoyltransferase 2 [Homo sapiens] 1015 0.0
gi|10835073 N-myristoyltransferase 1 [Homo sapiens] 759 0.0
gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 44 4e-04
gi|35493853 otoferlin isoform c [Homo sapiens] 38 0.019
gi|35493868 otoferlin isoform b [Homo sapiens] 38 0.019
gi|35493860 otoferlin isoform d [Homo sapiens] 38 0.019
gi|34740331 otoferlin isoform a [Homo sapiens] 38 0.019
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 37 0.032
gi|117320550 hypothetical protein LOC400566 [Homo sapiens] 37 0.042
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 37 0.042
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 37 0.054
gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens] 37 0.054
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 37 0.054
gi|34878777 ring finger protein 20 [Homo sapiens] 36 0.071
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap... 36 0.071
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap... 36 0.071
gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens] 35 0.12
gi|153946397 Na+/K+ -ATPase alpha 4 subunit isoform 1 [Homo sapi... 35 0.16
gi|225637489 hypothetical protein LOC54777 [Homo sapiens] 35 0.21
gi|5803092 methionyl aminopeptidase 2 [Homo sapiens] 35 0.21
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 34 0.27
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 34 0.35
gi|40068059 CBF1 interacting corepressor [Homo sapiens] 33 0.46
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 33 0.46
gi|168229156 NFKB activating protein [Homo sapiens] 33 0.46
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 33 0.46
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 33 0.46
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 33 0.46
gi|56090620 NFKB activating protein-like [Homo sapiens] 33 0.46
gi|12751497 hypothetical protein LOC65265 [Homo sapiens] 33 0.60
>gi|4758816 N-myristoyltransferase 2 [Homo sapiens]
Length = 498
Score = 1015 bits (2624), Expect = 0.0
Identities = 498/498 (100%), Positives = 498/498 (100%)
Query: 1 MAEDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPN 60
MAEDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPN
Sbjct: 1 MAEDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPN 60
Query: 61 SGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQ 120
SGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQ
Sbjct: 61 SGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQ 120
Query: 121 FWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEVLKELYTLLNE 180
FWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEVLKELYTLLNE
Sbjct: 121 FWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEVLKELYTLLNE 180
Query: 181 NYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISAIPANIRIYDS 240
NYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISAIPANIRIYDS
Sbjct: 181 NYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISAIPANIRIYDS 240
Query: 241 VKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPIATCRYWH 300
VKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPIATCRYWH
Sbjct: 241 VKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPIATCRYWH 300
Query: 301 RSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKSVRELINTYLK 360
RSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKSVRELINTYLK
Sbjct: 301 RSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKSVRELINTYLK 360
Query: 361 QFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVMHHPAHKSLKA 420
QFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVMHHPAHKSLKA
Sbjct: 361 QFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVMHHPAHKSLKA 420
Query: 421 AYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYL 480
AYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYL
Sbjct: 421 AYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYL 480
Query: 481 YNWRCPGTDSEKVGLVLQ 498
YNWRCPGTDSEKVGLVLQ
Sbjct: 481 YNWRCPGTDSEKVGLVLQ 498
>gi|10835073 N-myristoyltransferase 1 [Homo sapiens]
Length = 496
Score = 759 bits (1959), Expect = 0.0
Identities = 372/508 (73%), Positives = 426/508 (83%), Gaps = 22/508 (4%)
Query: 1 MAEDSESAASQQSLEL--------DDQDTCGIDGDNEEETEHAKG--SPGGYLGAKKKKK 50
MA++SE+A + L + + C D +NEE+ + +G SP GAKKKKK
Sbjct: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCS-DCENEEDNSYNRGGLSPANDTGAKKKKK 59
Query: 51 KQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARN 110
KQK+KKEK G+++DSA D QP K S+P +++Q+IQ+A+EL S QGPA+
Sbjct: 60 KQKKKKEK----GSETDSAQD-------QPVKMNSLPAERIQEIQKAIELFSVGQGPAKT 108
Query: 111 IDEAAKHRYQFWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEV 170
++EA+K YQFWDTQPVPKL EV+ +HG +EPDKDN+RQEPY+LPQGF WD LDL D V
Sbjct: 109 MEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGV 168
Query: 171 LKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISA 230
LKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWL QWHCGVRV S++KLVGFISA
Sbjct: 169 LKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISA 228
Query: 231 IPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLP 290
IPANI IYD+ KKMVEINFLCVHKKLRSKRVAPVLIREITRRV+LEGIFQAVYTAGVVLP
Sbjct: 229 IPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLP 288
Query: 291 KPIATCRYWHRSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKS 350
KP+ TCRYWHRSLNPRKL+EVKFSHLSRNMT+QRTMKLYRLP+ KT+GLRPME KDI
Sbjct: 289 KPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPV 348
Query: 351 VRELINTYLKQFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVM 410
V +L+ YLKQFHL PVM +EEV HWF P+E+IIDTFVVE+ NG++TDFLSFYTLPST+M
Sbjct: 349 VHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIM 408
Query: 411 HHPAHKSLKAAYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFG 470
+HP HKSLKAAYSFYN+HT+TPLLDLMSDAL+LAK KGFDVFNALDLMENKTFLEKLKFG
Sbjct: 409 NHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFG 468
Query: 471 IGDGNLQYYLYNWRCPGTDSEKVGLVLQ 498
IGDGNLQYYLYNW+CP +EKVGLVLQ
Sbjct: 469 IGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496
>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
[Homo sapiens]
Length = 1828
Score = 43.5 bits (101), Expect = 4e-04
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 27 DNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSV 86
+N+E E S G K++KK K KKEKP SG KS S S + + + + V
Sbjct: 1396 ENKENKEKQMSSRKDKEG-DKERKKSKDKKEKPKSGDAKSSSKSKRSQGPVHITAGSEPV 1454
Query: 87 PMQKLQDIQRAMELLSACQGPARNIDEAAK 116
P+ + +D E S C+ R + +A K
Sbjct: 1455 PIGEDEDDDLDQETFSICKERMRPVKKALK 1484
Score = 31.6 bits (70), Expect = 1.7
Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 15/106 (14%)
Query: 2 AEDSESAASQQSLELDDQDTCGIDGDNEEETEHAK------GSPGGYLGAKKKK-----K 50
A E A + + + D G+ N E ++ S G G+ K++ K
Sbjct: 87 ASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLK 146
Query: 51 KQKRKKEKPNSG----GTKSDSASDSQEIKIQQPSKNPSVPMQKLQ 92
KQ++ K++P+ GT ++S + +++K ++P +VP +++
Sbjct: 147 KQEKWKQEPSEDEQEQGTSAESEPEQKKVKARRPVPRRTVPKPRVK 192
Score = 29.3 bits (64), Expect = 8.7
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 36 KGSPGGYLGAKKKKKKQKRKKEK-----------PNSGGTKSDSASDSQEIKIQQPSKNP 84
KG+ G AK KK+K + KKE S SD+ S+ E+K K+P
Sbjct: 1328 KGAVTGGEEAKLKKRKPRVKKENKVPRLKEEHGIELSSPRHSDNPSEEGEVKDDGLEKSP 1387
Query: 85 SVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQFWDTQPVPKLDEVITS 136
QK ++ + E Q +R E K R + D + PK + +S
Sbjct: 1388 MKKKQKKKENKENKEK----QMSSRKDKEGDKERKKSKDKKEKPKSGDAKSS 1435
>gi|35493853 otoferlin isoform c [Homo sapiens]
Length = 1307
Score = 38.1 bits (87), Expect = 0.019
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 15 ELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKK-KKKKQKRKKEKPNSGGTKSDSASDSQ 73
+L Q+ GID + +EE ++ +G G G +K + K+++KK+ +SG + A + +
Sbjct: 652 QLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAKEEKKKKTQSSGSGQGSEAPEKK 711
Query: 74 EIKIQQ 79
+ KI +
Sbjct: 712 KPKIDE 717
>gi|35493868 otoferlin isoform b [Homo sapiens]
Length = 1230
Score = 38.1 bits (87), Expect = 0.019
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 15 ELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKK-KKKKQKRKKEKPNSGGTKSDSASDSQ 73
+L Q+ GID + +EE ++ +G G G +K + K+++KK+ +SG + A + +
Sbjct: 575 QLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAKEEKKKKTQSSGSGQGSEAPEKK 634
Query: 74 EIKIQQ 79
+ KI +
Sbjct: 635 KPKIDE 640
>gi|35493860 otoferlin isoform d [Homo sapiens]
Length = 1230
Score = 38.1 bits (87), Expect = 0.019
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 15 ELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKK-KKKKQKRKKEKPNSGGTKSDSASDSQ 73
+L Q+ GID + +EE ++ +G G G +K + K+++KK+ +SG + A + +
Sbjct: 575 QLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAKEEKKKKTQSSGSGQGSEAPEKK 634
Query: 74 EIKIQQ 79
+ KI +
Sbjct: 635 KPKIDE 640
>gi|34740331 otoferlin isoform a [Homo sapiens]
Length = 1997
Score = 38.1 bits (87), Expect = 0.019
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 15 ELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKK-KKKKQKRKKEKPNSGGTKSDSASDSQ 73
+L Q+ GID + +EE ++ +G G G +K + K+++KK+ +SG + A + +
Sbjct: 1342 QLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAKEEKKKKTQSSGSGQGSEAPEKK 1401
Query: 74 EIKIQQ 79
+ KI +
Sbjct: 1402 KPKIDE 1407
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 37.4 bits (85), Expect = 0.032
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 2 AEDSESAA-SQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPN 60
+ DS+S++ SQ S + D ++ + + + +H K S K KK+K+KRKK K +
Sbjct: 201 SSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNS------RKHKKEKKKRKKSKKS 254
Query: 61 SGGTKSDSASDSQEIKIQQPSKNPSVP 87
+ ++Q +P + P +P
Sbjct: 255 ASSESEAENLEAQPQSTVRPEEIPPIP 281
>gi|117320550 hypothetical protein LOC400566 [Homo sapiens]
Length = 433
Score = 37.0 bits (84), Expect = 0.042
Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 40/178 (22%)
Query: 11 QQSLELDDQDTCGIDG--DNEEETEHAKGSPGGYLGAK-----------KKKKKQKRKKE 57
Q S LD + G G DN+ E E +G G G++ K+K +K+K++
Sbjct: 32 QPSGRLDRRGGAGTMGYKDNDGEEEEREGGAAGPRGSRLPPITGGASELAKRKVKKKKRK 91
Query: 58 KPNSGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSAC--QGPARNIDEAA 115
K G K D SQ +K Q S + ++LS C +GP
Sbjct: 92 KKTKGSGKGDDKHQSQSLKSQPLSSS-------------FHDILSPCKERGP------KP 132
Query: 116 KHRYQFWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEVLKE 173
+HR + + +P ++ PD + + + WD + L+D E KE
Sbjct: 133 EHRQSKVEKKHLPSDSSTVSL-----PDFAEIENLANRINESLRWDGI-LADPEAEKE 184
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 37.0 bits (84), Expect = 0.042
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 15/135 (11%)
Query: 3 EDSESAASQQS-LELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNS 61
E+ + A Q+ ++ +D GI+ N E T G KKK ++KRKK K +S
Sbjct: 955 ENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPKKGQKKKSIEKKRKKSKGDS 1014
Query: 62 GGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHR--- 118
+ ++A S++ + P P I EL+ C G ++++ K
Sbjct: 1015 DISDEEAAQQSKK------KRGPRTP-----PITTKEELVEMCNGKNGILEDSQKKEDTA 1063
Query: 119 YQFWDTQPVPKLDEV 133
+ W + VP EV
Sbjct: 1064 FSDWSDEDVPDRTEV 1078
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 36.6 bits (83), Expect = 0.054
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 5 SESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSGGT 64
SES + + S E D++D ++EE+ ++ G +K KKK +K + +S
Sbjct: 707 SESGSGESSSESDNED----QDEDEEKGRGSESEQSEEDGKRKTKKKVPERKGEASSSDE 762
Query: 65 KSDSASDSQEIKIQQPSK 82
SDS+S S E ++ S+
Sbjct: 763 GSDSSSSSSESEMTSESE 780
>gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]
Length = 4024
Score = 36.6 bits (83), Expect = 0.054
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 337 TSGLRPMEPKDIKSVRELINTYLKQF--HLAPVMDEEEVAHWFLPREHIIDTFVVESP-- 392
T + PME ++ V +L+ +LK F + + DE + R+ I+D FV++ P
Sbjct: 174 TDHVAPMEDSWLEHVLDLVPQHLKVFTDSIVTLSDEMREDYLLSVRKSIVD-FVLKDPRE 232
Query: 393 --NGKLTDFLSFYTLPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMSDALILAKSKGFD 450
+ K TD L + ++ P KS AA S+ H L+ M+ ++
Sbjct: 233 KGDDKKTDELPAHRAEMEILPKPWRKSFLAASSYIRDH-----LNAMNPTMLAVLDLWHT 287
Query: 451 VFNALDLMENKTF 463
F L L++ K F
Sbjct: 288 NFKKLRLVDIKEF 300
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 36.6 bits (83), Expect = 0.054
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 27 DNEEETEHAKGSPGG-YLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKN 83
+NEE+ E S G Y KKKKKK K KKEK K + D+ + +++P +
Sbjct: 77 ENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDEDEDDNDDGCLKEPKSS 134
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 36.2 bits (82), Expect = 0.071
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 2 AEDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNS 61
+ED S +S +D + D EE + ++K+K+++R+K+K
Sbjct: 540 SEDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKE 599
Query: 62 GGTKSDSASDSQEIKIQQPSKNPS-------VPMQKLQDIQRAMELL 101
+ DSA D ++ K K + + ++K Q+ Q+ M+LL
Sbjct: 600 SEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLL 646
>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
sapiens]
Length = 858
Score = 36.2 bits (82), Expect = 0.071
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 8 AASQQSLELDDQDTCGID-GDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSGGTKS 66
+ S+ S LD ++ G G + H G+ G AKK KKK K+++ K NS +++
Sbjct: 728 SGSEPSSSLDSVESGGAALGGRGSPSSHLLGADHGLRKAKKPKKKTKKRRHKSNSPESET 787
Query: 67 DSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQFWDT 124
D E K + S K +++Q+A + P R+ K WDT
Sbjct: 788 D-----PEEKAGKESDEKEQEQDKDRELQQA-------ELPNRSPGFGIKKEKTGWDT 833
>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
sapiens]
Length = 871
Score = 36.2 bits (82), Expect = 0.071
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 8 AASQQSLELDDQDTCGID-GDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSGGTKS 66
+ S+ S LD ++ G G + H G+ G AKK KKK K+++ K NS +++
Sbjct: 741 SGSEPSSSLDSVESGGAALGGRGSPSSHLLGADHGLRKAKKPKKKTKKRRHKSNSPESET 800
Query: 67 DSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARNIDEAAKHRYQFWDT 124
D E K + S K +++Q+A + P R+ K WDT
Sbjct: 801 D-----PEEKAGKESDEKEQEQDKDRELQQA-------ELPNRSPGFGIKKEKTGWDT 846
>gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]
Length = 1041
Score = 35.4 bits (80), Expect = 0.12
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 27 DNEEETEHAKGSPGGYLGAKKKKKKQKRKK------EKPNSGGTKSDSASDSQEIKIQQP 80
D+EE +E G L K+KK+K RKK E+ + G K S Q K +
Sbjct: 102 DSEESSEETVSRAGSSLQKKRKKRKHLRKKREEEEEEEASEKGKKKTGGSKQQTEKPESE 161
Query: 81 SKNPSVPMQKLQDIQ 95
+ ++LQD++
Sbjct: 162 DEWERTERERLQDLE 176
>gi|153946397 Na+/K+ -ATPase alpha 4 subunit isoform 1 [Homo
sapiens]
Length = 1029
Score = 35.0 bits (79), Expect = 0.16
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 48 KKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLS 102
KKK KR+K+K N K + D ++ +++ S SV + K QRA E+L+
Sbjct: 27 KKKMVKREKQKRNMEELKKEVVMDDHKLTLEELSTKYSVDLTKGHSHQRAKEILT 81
>gi|225637489 hypothetical protein LOC54777 [Homo sapiens]
Length = 2441
Score = 34.7 bits (78), Expect = 0.21
Identities = 16/55 (29%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 46 KKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPS-VPMQKLQDIQRAME 99
+ K+K+++R KEK N + D +E K+++P ++ S P+++L+D+ ++E
Sbjct: 1095 RSKEKEKERSKEKENERSKEKDKEKGKEE-KVKEPKQSQSPAPIKQLEDLPMSIE 1148
>gi|5803092 methionyl aminopeptidase 2 [Homo sapiens]
Length = 478
Score = 34.7 bits (78), Expect = 0.21
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 4 DSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKR 54
D ES AS + + + D + +E+ E G G G KKKKKK+KR
Sbjct: 57 DKESGASVDEVARQLERSALEDKERDEDDEDGDGDGDGATGKKKKKKKKKR 107
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 34.3 bits (77), Expect = 0.27
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 10 SQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSGGTKSDSA 69
+++S++ D++ T D D+E + + KG G K KK K+K K N+ T+ +S
Sbjct: 433 NKKSVKNDEEST---DADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESD 489
Query: 70 SDSQEIKIQQPSKNPS 85
+ ++ K K S
Sbjct: 490 LELKKDKKHSKEKKGS 505
Score = 29.6 bits (65), Expect = 6.6
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 11 QQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEK---PNSGGTKSD 67
++ ++ D + T GD+++E + K KKK KK +KK+ P S T+S
Sbjct: 323 KKDVKKDTESTDAESGDSKDERKDTKKD-------KKKLKKDDKKKDTKKYPESTDTESG 375
Query: 68 SASDSQ--EIKIQQPSKN 83
A D++ +++ SKN
Sbjct: 376 DAKDARNDSRNLKKASKN 393
Score = 29.3 bits (64), Expect = 8.7
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 3 EDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSG 62
E ES ++ + D + N+EE+ A P G +KK KK +K+ K+
Sbjct: 414 ESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPKG--DSKKGKKDEKKGKKDSKKD 471
Query: 63 GTKSDSASDSQEIKIQ 78
K D+ +++ +++
Sbjct: 472 DKKKDAKKNAESTEME 487
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 33.9 bits (76), Expect = 0.35
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 38 SPGGYLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSV 86
SPG GAK KKKK E SGG S S QE+ + S + ++
Sbjct: 37 SPGIPAGAKTKKKKTDSSPETTTSGGCHSPGDSQYQELAVALESSSVTI 85
>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
Length = 450
Score = 33.5 bits (75), Expect = 0.46
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 46 KKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQ 105
KKKK ++ R K K + + S S+S S S + S K + IQR + C
Sbjct: 241 KKKKFQKSRSKHKKHKSSSSSSSSSSSSSSTETSESSSESESNNKEKKIQRKKRKKNKCS 300
Query: 106 GPARNIDEAAKHRYQFWDTQPVPKL-DEVITSHGAIEPDKDNVR 148
G N D K D KL +E+ +SH E K+ R
Sbjct: 301 G-HNNSDSEEK------DKSKKRKLHEELSSSHHNREKAKEKPR 337
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 33.5 bits (75), Expect = 0.46
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 38 SPGGYLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSV 86
SPG GAK KKKK E SGG S S QE+ + S + ++
Sbjct: 37 SPGIPAGAKTKKKKTDSSPETTTSGGGHSPGDSQYQELAVALESSSVTI 85
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 33.5 bits (75), Expect = 0.46
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 10 SQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKK---KKQKRKKEKPNSGGTKS 66
S+ S D +T D DN+ + AK KKKK KK K+K+ K + +
Sbjct: 210 SEDSDSDSDSETDSSDEDNKRRAKKAKKKE------KKKKHRSKKYKKKRSKKSRKESSD 263
Query: 67 DSASDSQEIKIQQPSKN 83
S+ +SQE ++ P K+
Sbjct: 264 SSSKESQEEFLENPWKD 280
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 33.5 bits (75), Expect = 0.46
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 38 SPGGYLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSV 86
SPG GAK KKKK E SGG S S QE+ + S + ++
Sbjct: 37 SPGIPAGAKTKKKKTDSSPETTTSGGGHSPGDSQYQELAVALESSSVTI 85
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 33.5 bits (75), Expect = 0.46
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 27 DNEEETEHAKGSPGG-YLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPS 85
+ EEE S G Y KKKKKK KKEK +KS + +E SK P
Sbjct: 94 EEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKK----SKSKRKEEEEEEDDDDDSKEPK 149
Query: 86 VPMQKLQD 93
Q L+D
Sbjct: 150 SSAQLLED 157
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 33.5 bits (75), Expect = 0.46
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 38 SPGGYLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSV 86
SPG GAK KKKK E SGG S S QE+ + S + ++
Sbjct: 37 SPGIPAGAKTKKKKTDSSPETTTSGGGHSPGDSQYQELAVALESSSVTI 85
>gi|56090620 NFKB activating protein-like [Homo sapiens]
Length = 402
Score = 33.5 bits (75), Expect = 0.46
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 25 DGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSGGTKSDSASDS 72
D ++E +T + AKKKKKK+K K +K + TK +S+ S
Sbjct: 205 DSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKESSDSS 252
Score = 32.7 bits (73), Expect = 0.78
Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 11/129 (8%)
Query: 3 EDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSG 62
+ E + E+ Q + D ++EE + K K K+K +K +
Sbjct: 147 DSDEHTPVEDEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRKYSDSDS 206
Query: 63 GTKSDSASDSQE----IKIQQPSKNPSVPMQKLQDIQRAMELL-SACQGPARNIDEAAKH 117
++SD+ SDS + +K ++ K +K ++ + E S+C+ ++ EA
Sbjct: 207 NSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKESSDSSCKDSEEDLSEAT-- 264
Query: 118 RYQFWDTQP 126
W QP
Sbjct: 265 ----WMEQP 269
>gi|12751497 hypothetical protein LOC65265 [Homo sapiens]
Length = 229
Score = 33.1 bits (74), Expect = 0.60
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 18 DQDTCGIDGDNEEETEHAKGSPGGYLGAKKKKKKQKRKKEKPNSGGTKSDSASDSQEIKI 77
+Q TC N + H G GG K+K KK+ R + +GG K+ +E+ +
Sbjct: 46 EQPTCS----NADSRAHPLGDEGGTASKKQKNKKKTRNRASVANGGEKASEKLAPEEVPL 101
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,948,435
Number of Sequences: 37866
Number of extensions: 934313
Number of successful extensions: 5561
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 4891
Number of HSP's gapped (non-prelim): 579
length of query: 498
length of database: 18,247,518
effective HSP length: 106
effective length of query: 392
effective length of database: 14,233,722
effective search space: 5579619024
effective search space used: 5579619024
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.