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Search of human proteins with 46877102
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo
sapiens]
(251 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens] 499 e-141
gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens] 499 e-141
gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens] 259 2e-69
gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens] 247 6e-66
gi|27477113 sterol regulatory element-binding transcription fact... 58 7e-09
gi|21704261 MAX protein isoform a [Homo sapiens] 58 9e-09
gi|4557755 microphthalmia-associated transcription factor isofor... 56 3e-08
gi|21704263 MAX protein isoform b [Homo sapiens] 56 3e-08
gi|38156705 microphthalmia-associated transcription factor isofo... 56 3e-08
gi|38156703 microphthalmia-associated transcription factor isofo... 56 3e-08
gi|38156701 microphthalmia-associated transcription factor isofo... 56 3e-08
gi|38156699 microphthalmia-associated transcription factor isofo... 56 3e-08
gi|38156697 microphthalmia-associated transcription factor isofo... 56 3e-08
gi|21704269 MAX protein isoform e [Homo sapiens] 56 3e-08
gi|21704265 MAX protein isoform c [Homo sapiens] 56 3e-08
gi|8659574 transcription factor E3 [Homo sapiens] 53 3e-07
gi|52630419 sterol regulatory element binding transcription fact... 51 8e-07
gi|22547195 sterol regulatory element binding transcription fact... 51 8e-07
gi|114431248 hypothetical protein LOC205717 [Homo sapiens] 51 1e-06
gi|38201614 transcription factor-like protein 4 isoform alpha [H... 51 1e-06
gi|38201612 transcription factor-like protein 4 isoform beta [Ho... 49 3e-06
gi|24586667 transcription factor-like protein 4 isoform gamma [H... 49 3e-06
gi|24307933 transcription factor EB [Homo sapiens] 48 9e-06
gi|30795240 aryl hydrocarbon receptor nuclear translocator isofo... 45 8e-05
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor... 45 8e-05
gi|64762402 transcription factor EC isoform b [Homo sapiens] 44 1e-04
gi|6912702 transcription factor EC isoform a [Homo sapiens] 44 1e-04
gi|71852582 aryl hydrocarbon receptor nuclear translocator-like ... 44 1e-04
gi|71852580 aryl hydrocarbon receptor nuclear translocator-like ... 44 1e-04
gi|42716311 aryl hydrocarbon receptor nuclear translocator-like ... 44 1e-04
>gi|6005934 upstream stimulatory factor 1 isoform 1 [Homo sapiens]
Length = 310
Score = 499 bits (1284), Expect = e-141
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MYRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYF 60
MYRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYF
Sbjct: 60 MYRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYF 119
Query: 61 PSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIA 120
PSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIA
Sbjct: 120 PSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIA 179
Query: 121 PRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQS 180
PRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQS
Sbjct: 180 PRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQS 239
Query: 181 KGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHH 240
KGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHH
Sbjct: 240 KGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHH 299
Query: 241 GLEVVIKNDSN 251
GLEVVIKNDSN
Sbjct: 300 GLEVVIKNDSN 310
>gi|46877102 upstream stimulatory factor 1 isoform 2 [Homo sapiens]
Length = 251
Score = 499 bits (1284), Expect = e-141
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MYRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYF 60
MYRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYF
Sbjct: 1 MYRVIQVSEGQLDGQTEGTGAISGYPATQSMTQAVIQGAFTSDDAVDTEGTAAETHYTYF 60
Query: 61 PSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIA 120
PSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIA
Sbjct: 61 PSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQRSIA 120
Query: 121 PRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQS 180
PRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQS
Sbjct: 121 PRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQS 180
Query: 181 KGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHH 240
KGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHH
Sbjct: 181 KGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHH 240
Query: 241 GLEVVIKNDSN 251
GLEVVIKNDSN
Sbjct: 241 GLEVVIKNDSN 251
>gi|4507847 upstream stimulatory factor 2 isoform 1 [Homo sapiens]
Length = 346
Score = 259 bits (661), Expect = 2e-69
Identities = 140/277 (50%), Positives = 182/277 (65%), Gaps = 48/277 (17%)
Query: 2 YRVIQVSEGQLDGQTEGTGAISGYPAT------QSMTQ---------------------- 33
YRV+QV++GQLDGQ + GA+S Q++TQ
Sbjct: 79 YRVVQVTDGQLDGQGDTAGAVSVVSTAAFAGGQQAVTQVGVDGAAQRPGPAAASVPPGPA 138
Query: 34 -----AVIQGAFTSDDAVDTEGTAAETHYTYFPSTAVGDGAGGTTSGSTAAVVTTQGSEA 88
AVIQ F++ + E + E + YFP+++VGD +TA V T
Sbjct: 139 APFPLAVIQNPFSNGGSPAAEAVSGEARFAYFPASSVGD--------TTAVSVQTTDQSL 190
Query: 89 LLGQATPPGTGQFFVMMSPQEVLQGGSQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEV 148
G GQF+VMM+PQ+VLQ G+QR+IAPRTHPYSPK + RT RDE+RRAQHNEV
Sbjct: 191 QAG-------GQFYVMMTPQDVLQTGTQRTIAPRTHPYSPKIDGTRTPRDERRRAQHNEV 243
Query: 149 ERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEELQG 208
ERRRRDKINNWIVQLSKIIPDC+ +++K+G SKGGILSKACDYI+ELRQ+N R+ E +
Sbjct: 244 ERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKE 303
Query: 209 LDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEVV 245
++LQ+DN++LRQQ+E+LKN+N LLRAQL+ H LE+V
Sbjct: 304 AERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMV 340
>gi|46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens]
Length = 279
Score = 247 bits (631), Expect = 6e-66
Identities = 124/213 (58%), Positives = 159/213 (74%), Gaps = 15/213 (7%)
Query: 33 QAVIQGAFTSDDAVDTEGTAAETHYTYFPSTAVGDGAGGTTSGSTAAVVTTQGSEALLGQ 92
QAVIQ F++ + E + E + YFP+++VGD +TA V T G
Sbjct: 76 QAVIQNPFSNGGSPAAEAVSGEARFAYFPASSVGD--------TTAVSVQTTDQSLQAG- 126
Query: 93 ATPPGTGQFFVMMSPQEVLQGGSQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERRR 152
GQF+VMM+PQ+VLQ G+QR+IAPRTHPYSPK + RT RDE+RRAQHNEVERRR
Sbjct: 127 ------GQFYVMMTPQDVLQTGTQRTIAPRTHPYSPKIDGTRTPRDERRRAQHNEVERRR 180
Query: 153 RDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEELQGLDQL 212
RDKINNWIVQLSKIIPDC+ +++K+G SKGGILSKACDYI+ELRQ+N R+ E + ++L
Sbjct: 181 RDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKEAERL 240
Query: 213 QLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEVV 245
Q+DN++LRQQ+E+LKN+N LLRAQL+ H LE+V
Sbjct: 241 QMDNELLRQQIEELKNENALLRAQLQQHNLEMV 273
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 58.2 bits (139), Expect = 7e-09
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 23/152 (15%)
Query: 95 PPGTGQFFVMMSPQEVLQGGSQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRD 154
P G +++ V+ G Q + + P K P ++ +RR HN +E+R R
Sbjct: 289 PTLVGSSGTILTTMPVMMG--QEKVPIKQVPGGVKQLEP--PKEGERRTTHNIIEKRYRS 344
Query: 155 KINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEE--------- 205
IN+ I++L ++ T + K G+L KA DYI+ L+Q NH+L +E
Sbjct: 345 SINDKIIELKDLVM-----GTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENMVLKLANQ 399
Query: 206 ----LQGLDQLQLDNDVLRQQVEDLKNKNLLL 233
L+G+D L ++ + ++ED N+N+LL
Sbjct: 400 KNKLLKGIDLGSLVDNEVDLKIEDF-NQNVLL 430
>gi|21704261 MAX protein isoform a [Homo sapiens]
Length = 160
Score = 57.8 bits (138), Expect = 9e-09
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 131 EAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACD 190
E PR +RA HN +ER+RRD I + L +P S++ K+ S+ IL KA +
Sbjct: 14 EQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVP--SLQGEKA--SRAQILDKATE 69
Query: 191 YIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLK 227
YIQ +R+ NH Q +D L+ N +L QQV L+
Sbjct: 70 YIQYMRRKNH---THQQDIDDLKRQNALLEQQVRALE 103
>gi|4557755 microphthalmia-associated transcription factor isoform 4
[Homo sapiens]
Length = 419
Score = 56.2 bits (134), Expect = 3e-08
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 19/125 (15%)
Query: 126 YSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGIL 185
+ +SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL
Sbjct: 190 FPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTIL 247
Query: 186 SKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHH 240
+ DYI++L++ R E L+N RQ+ + N++LLLR Q R H
Sbjct: 248 KASVDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAH 295
Query: 241 GLEVV 245
GL ++
Sbjct: 296 GLSLI 300
>gi|21704263 MAX protein isoform b [Homo sapiens]
Length = 151
Score = 56.2 bits (134), Expect = 3e-08
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 138 DEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQ 197
D +RA HN +ER+RRD I + L +P S++ K+ S+ IL KA +YIQ +R+
Sbjct: 12 DADKRAHHNALERKRRDHIKDSFHSLRDSVP--SLQGEKA--SRAQILDKATEYIQYMRR 67
Query: 198 SNHRLSEELQGLDQLQLDNDVLRQQVEDLK 227
NH Q +D L+ N +L QQV L+
Sbjct: 68 KNH---THQQDIDDLKRQNALLEQQVRALE 94
>gi|38156705 microphthalmia-associated transcription factor isoform
6 [Homo sapiens]
Length = 495
Score = 55.8 bits (133), Expect = 3e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 269 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 326
Query: 189 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 243
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 327 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 374
Query: 244 VV 245
++
Sbjct: 375 LI 376
>gi|38156703 microphthalmia-associated transcription factor isoform
2 [Homo sapiens]
Length = 504
Score = 55.8 bits (133), Expect = 3e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 278 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 335
Query: 189 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 243
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 336 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 383
Query: 244 VV 245
++
Sbjct: 384 LI 385
>gi|38156701 microphthalmia-associated transcription factor isoform
3 [Homo sapiens]
Length = 519
Score = 55.8 bits (133), Expect = 3e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 293 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 350
Query: 189 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 243
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 351 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 398
Query: 244 VV 245
++
Sbjct: 399 LI 400
>gi|38156699 microphthalmia-associated transcription factor isoform
1 [Homo sapiens]
Length = 520
Score = 55.8 bits (133), Expect = 3e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 294 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 351
Query: 189 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 243
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 352 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 399
Query: 244 VV 245
++
Sbjct: 400 LI 401
>gi|38156697 microphthalmia-associated transcription factor isoform
5 [Homo sapiens]
Length = 413
Score = 55.8 bits (133), Expect = 3e-08
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
+SEA ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 187 ESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMR--WNKGTILKAS 244
Query: 189 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLR-----AQLRHHGLE 243
DYI++L++ R E L+N RQ+ + N++LLLR Q R HGL
Sbjct: 245 VDYIRKLQREQQRAKE---------LEN---RQKKLEHANRHLLLRIQELEMQARAHGLS 292
Query: 244 VV 245
++
Sbjct: 293 LI 294
>gi|21704269 MAX protein isoform e [Homo sapiens]
Length = 134
Score = 55.8 bits (133), Expect = 3e-08
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 131 EAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACD 190
E PR +RA HN +ER+RRD I + L +P S++ K+ S+ IL KA +
Sbjct: 14 EQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVP--SLQGEKA--SRAQILDKATE 69
Query: 191 YIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVE 224
YIQ +R+ NH Q +D L+ N +L QQ E
Sbjct: 70 YIQYMRRKNH---THQQDIDDLKRQNALLEQQGE 100
>gi|21704265 MAX protein isoform c [Homo sapiens]
Length = 103
Score = 55.8 bits (133), Expect = 3e-08
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 131 EAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACD 190
E PR +RA HN +ER+RRD I + L +P S++ K+ S+ IL KA +
Sbjct: 14 EQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVP--SLQGEKA--SRAQILDKATE 69
Query: 191 YIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVE 224
YIQ +R+ NH Q +D L+ N +L QQ E
Sbjct: 70 YIQYMRRKNH---THQQDIDDLKRQNALLEQQGE 100
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 52.8 bits (125), Expect = 3e-07
Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Query: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
++EA ++ +++ HN +ERRRR IN+ I +L +IP S + +KG IL +
Sbjct: 335 ETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSS--DPEMRWNKGTILKAS 392
Query: 189 CDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEV 244
DYI++L++ R + L+ N L+ ++++L+ L+AQ+ HGL V
Sbjct: 393 VDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELE-----LQAQI--HGLPV 441
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 51.2 bits (121), Expect = 8e-07
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
K+ A +R EKR A HN +E+R R IN+ I++L ++ T++ +K +L KA
Sbjct: 343 KAPASAQSRGEKRTA-HNAIEKRYRSSINDKIIELKDLV-----VGTEAKLNKSAVLRKA 396
Query: 189 CDYIQELRQSNHRLSEE 205
DYI+ L+ SN +L +E
Sbjct: 397 IDYIRFLQHSNQKLKQE 413
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 51.2 bits (121), Expect = 8e-07
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 129 KSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKA 188
K+ A +R EKR A HN +E+R R IN+ I++L ++ T++ +K +L KA
Sbjct: 313 KAPASAQSRGEKRTA-HNAIEKRYRSSINDKIIELKDLV-----VGTEAKLNKSAVLRKA 366
Query: 189 CDYIQELRQSNHRLSEE 205
DYI+ L+ SN +L +E
Sbjct: 367 IDYIRFLQHSNQKLKQE 383
>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
Length = 2245
Score = 50.8 bits (120), Expect = 1e-06
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 125 PYSPKSEAPRTTRDEKR-RAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGG 183
P ++E P + K+ R HN VER R+ KIN I ++ ++IP C S QSK
Sbjct: 2 PEMTENETPTKKQHRKKNRETHNAVERHRKKKINAGINRIGELIP-C---SPALKQSKNM 57
Query: 184 ILSKACDYIQELRQSNHRLSEELQGLDQLQLDN-DVLRQQVEDLKNKN 230
IL +A YI EL++ N L L G + Q + LR+Q+E+++ +N
Sbjct: 58 ILDQAFKYITELKRQNDELL--LNGGNNEQAEEIKKLRKQLEEIQKEN 103
>gi|38201614 transcription factor-like protein 4 isoform alpha [Homo
sapiens]
Length = 214
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 115 SQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMES 174
S S+ P EA + + ++RR H + E++RRD I L I+P C +
Sbjct: 20 SDNSLDPDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQD 79
Query: 175 TKSGQ---SKGGILSKACDYIQELRQSNHRLSEELQGL 209
G SK +L K DYIQ L + + EE+ L
Sbjct: 80 FSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTL 117
>gi|38201612 transcription factor-like protein 4 isoform beta [Homo
sapiens]
Length = 244
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 GGSQRSIAPRTHPYSPK--SEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDC 170
G + S P T EA + + ++RR H + E++RRD I L I+P C
Sbjct: 46 GSTSASSVPNTDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTC 105
Query: 171 SMESTKSGQ---SKGGILSKACDYIQELRQSNHRLSEELQGL 209
+ G SK +L K DYIQ L + + EE+ L
Sbjct: 106 QQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTL 147
>gi|24586667 transcription factor-like protein 4 isoform gamma [Homo
sapiens]
Length = 298
Score = 49.3 bits (116), Expect = 3e-06
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 113 GGSQRSIAPRTHPYSPK--SEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDC 170
G + S P T EA + + ++RR H + E++RRD I L I+P C
Sbjct: 100 GSTSASSVPNTDDEDSDYHQEAYKESYKDRRRRAHTQAEQKRRDAIKRGYDDLQTIVPTC 159
Query: 171 SMESTKSGQ---SKGGILSKACDYIQELRQSNHRLSEELQGL 209
+ G SK +L K DYIQ L + + EE+ L
Sbjct: 160 QQQDFSIGSQKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTL 201
>gi|24307933 transcription factor EB [Homo sapiens]
Length = 476
Score = 47.8 bits (112), Expect = 9e-06
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 130 SEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKAC 189
+E+ ++ +++ HN +ERRRR IN+ I +L +IP + + +KG IL +
Sbjct: 225 AESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVR--WNKGTILKASV 282
Query: 190 DYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEVVIKND 249
DYI+ +++ + E +L++ N L ++++L+ Q R HGL +
Sbjct: 283 DYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELE-------MQARVHGLPTTSPSG 335
Query: 250 SN 251
N
Sbjct: 336 MN 337
>gi|30795240 aryl hydrocarbon receptor nuclear translocator isoform
2 [Homo sapiens]
Length = 328
Score = 44.7 bits (104), Expect = 8e-05
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 129 KSEAPRTTRDEKR--RAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILS 186
+S+ +++ D++R R H+E+ERRRR+K+ +I +LS ++P CS + K K IL
Sbjct: 76 RSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARK--PDKLTILR 133
Query: 187 KACDYIQELR 196
A +++ LR
Sbjct: 134 MAVSHMKSLR 143
>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
[Homo sapiens]
Length = 789
Score = 44.7 bits (104), Expect = 8e-05
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 129 KSEAPRTTRDEKR--RAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILS 186
+S+ +++ D++R R H+E+ERRRR+K+ +I +LS ++P CS + K K IL
Sbjct: 76 RSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARK--PDKLTILR 133
Query: 187 KACDYIQELR 196
A +++ LR
Sbjct: 134 MAVSHMKSLR 143
>gi|64762402 transcription factor EC isoform b [Homo sapiens]
Length = 318
Score = 44.3 bits (103), Expect = 1e-04
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 137 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 196
++ +++ HN +ERRRR IN I +L +IP + + +KG IL + +YI+ L+
Sbjct: 107 KERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMR--WNKGTILKASVEYIKWLQ 164
Query: 197 QSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGL 242
+ R E +L+ N L ++++L+ Q R HGL
Sbjct: 165 KEQQRARELEHRQKKLEQANRRLLLRIQELE-------IQARTHGL 203
>gi|6912702 transcription factor EC isoform a [Homo sapiens]
Length = 347
Score = 44.3 bits (103), Expect = 1e-04
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 137 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 196
++ +++ HN +ERRRR IN I +L +IP + + +KG IL + +YI+ L+
Sbjct: 136 KERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMR--WNKGTILKASVEYIKWLQ 193
Query: 197 QSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGL 242
+ R E +L+ N L ++++L+ Q R HGL
Sbjct: 194 KEQQRARELEHRQKKLEQANRRLLLRIQELE-------IQARTHGL 232
>gi|71852582 aryl hydrocarbon receptor nuclear translocator-like
isoform b [Homo sapiens]
Length = 582
Score = 43.9 bits (102), Expect = 1e-04
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 137 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 196
R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +L A +++ LR
Sbjct: 26 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 83
Query: 197 QSNHRLSE 204
+ + +E
Sbjct: 84 GATNPYTE 91
>gi|71852580 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 43.9 bits (102), Expect = 1e-04
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 137 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 196
R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +L A +++ LR
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126
Query: 197 QSNHRLSE 204
+ + +E
Sbjct: 127 GATNPYTE 134
>gi|42716311 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 43.9 bits (102), Expect = 1e-04
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 137 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 196
R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +L A +++ LR
Sbjct: 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126
Query: 197 QSNHRLSE 204
+ + +E
Sbjct: 127 GATNPYTE 134
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,523,688
Number of Sequences: 37866
Number of extensions: 434898
Number of successful extensions: 2383
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 1903
Number of HSP's gapped (non-prelim): 552
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.